BMC Genomics 2008, 9:298 http://www.biomedcentral.com/1471-2164/9/298 Table 1: Transcripts differentially expressed between the procyclic and bloodstream forms of T. brucei. A Upregulated in the procyclic form Accession *Tb10.6k15.0030 *Tb927.6.450 Tb927.7.6850 Tb10.6k15.3510 *Tb09.244.2460 Tb11.01.8120 *Tb927.6.3740 *Tb10.70.0280 Tb11.01.3110 *Tb927.8.1610 Tb11.02.1480 Tb09.211.4760 Tb10.61.0870 Tb927.4.2020 Tb927.4.4350 Tb927.3.4020 Tb10.6k15.2060 Tb11.01.7800 Tb11.03.0090 Tb927.3.3190 Tb10.389.0330 Tb927.6.710 *Tb09.211.3540 *Tb09.160.4560 *Tb927.1.720 Tb11.02.0580 Tb927.2.4210 Tb11.01.7880 Tb927.4.3950 Tb927.7.2640 Tb11.01.2540 Tb11.47.0022 Tb10.406.0240 Tb927.1.3110 Tb09.160.3240 Tb927.7.3550 Tb10.100.0130 Name procyclin procyclin trans-sialidase CRAM BARP hypothetical ER chaperone Hsp70 mitochondrial Hsp60 chaperonin mitochondrial Hsc70 Gp63 (TbMSP-B) mitochondrial processing peptidase MCA5 metacaspase v-SNARE AP3 mu emp24 PI4K alpha PI3K (FRAP1) NDPK kinase (NME6) ribokinase (RBSK) NEK kinase (NEK2/6/7) UGP2 DPCK kinase glk1 (CARKL) AK PGKA (PGK1) Vps46 p60 glycosomal protein CAP17 CAP5.5 Sec34-like VHS domain-containing protein signal-peptide-containing protein dual specificity protein phosphatase Sec17/SNAP C2 domain-containing protein C2 domain-containing protein peroxin 14 PCF/BSF ratio limma fspma RT-PCR Classification 22.3 21.9 5.0 3.8 1.9 3.0 2.3 2.0 1.6 3.3 5.6 2.2 2.9 2.1 2.1 2.2 2.0 2.7 2.7 2.5 2.4 2.0 1.4 1.4 1.9 2.4 9.9 4.5 4.1 8.3 2.6 3.1 2.1 1.8 2.0 1.8 2.1 34.6 17.0 4.7 3.8 1.9 3.0 4.2 2.1 2.8 5.6 5.1 2.1 2.8 2.2 1.9 2.1 2.0 4.4 3.4 2.9 2.2 2.0 2.9 2.8 2.4 2.8 7.4 3.3 3.2 7.9 2.8 2.7 2.6 2.5 1.9 2.5 1.9 Cell surface Cell surface Cell surface Cell surface 1.6 Cell surface 2.8 Chaperones Chaperones Chaperones Chaperones 3.8 Proteases 5.6 Proteases 1.3 Proteases SNAREs Vesicle coat 1.0 Vesicle coat 1.7 PI kinases PI kinases 8.0 3.7 Other kinases Other kinases Other kinases Other kinases Other kinases Other kinases Other kinases Other kinases ESCRT Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Other trafficking Page 5 of 28 (page number not for citation purposes)