BMC Genomics 2004, 5:46 http://www.biomedcentral.com/1471-2164/5/46 Table 1: Differential Gene Expression in LAPE Cells Relative to LAPN Cells Table 1: Differential Gene Expression in LAPE Cells Relative to LAPN Cells (Continued) Growth Factor/Hormone Signaling Accession fold-change phospholipase C gamma 1 W65065 4.1 uPAR X62701 3.5 MDK1 (neuronal tyrosine kinase X79082 3.2 receptor) FGF-6 M92416 3.1 TC21 ras-like protein W91283 3.1 tyrosine kinase SEK receptor precursor W53668 3.0 GC Binding Protein Z36270 3.0 FGFR-4 X59927 2.9 casein kinase II alpha AA153726 2.8 FYN tyrosine protein kinase W35964 2.6 ERK2 W51403 2.5 PIP5KII P48426 2.5 P2X purinoceptor 3 (ATP receptor) AA050453 2.3 IRG47 GTP binding-protein M63630 2.3 p120GAP P09851 2.2 PDGF/VEGF member X99572 2.1 FGF-4 X14849 2.0 CAP adenylyl cyclase-associated protein L12367 2.0 N-ras X13664 1.9 protein-tyrosine phosphatase epsilon U35368 1.7 precursor guanine nucleotide binding protein G(K) W64628 1.6 alpha brain-derived neurotrophic factor X55573 1.6 Grg1 groucho-related gene 1 protein U61362 1.5 SOS 2 (ras GEF) Z11664 1.5 proteinase activated receptor 2, PAR2 Z48043 -1.8 receptor of activated protein kinase C AA024231 -1.8 (RACK1) PAK p21-activated kinase AA117286 -2.0 guanine nucleotide binding protein W64628 -2.1 gamma-7 ERF1 EGF-response factor 1 W33538 -2.3 Fgd1 (faciogenital dysplasis) (Cdc42 U22325 -2.7 GEF) 5-HT5B serotonin receptor X69867 -2.7 chemokine receptor type 4 P70658 -2.7 A-raf AA104043 -3.4 FGF-7 Z22703 -3.5 GRK5 W36620 -3.7 Emr1 receptor (EGF-7 TM family) U66890 -4.3 gliostatin (PD-ECGF) AA008687 -5.9 MAPKK 3 W29331 -8.2 Growth and Oncogenesis Accession fold-change semaphorin E X85994 5.0 Evi-1 proto-oncogene X54989 3.1 interferon-inducible protein 9–27 P13164 2.5 testis-specific c-abl protein J02995 2.5 MAF proto-oncogene W77346 2.3 MUC18 melanoma-associated antigen AA088962 2.3 B94 TNF-α-induced early response gene L24118 2.1 calpactin I light chain M16465 2.1 Fra 1 U34245 2.0 cell division protein FTSH homolog AA014057 1.9 ALL-1 zinc finger protein HRX W62585 1.9 LAF-4 lymphoid nuclear protein U34361 1.7 calpactin I heavy chain D10024 1.6 insulin-induced growth response protein CL-6 mage-like protein TRAF4 rearranged mutant c-myb gene Ing1 Fra 2 ERV1 MAGE-11 MCF2 Dbl proto-oncogene HSP 90 alpha membrane glycoprotein Cell Cycle/DNA Replication GADD153 wee1 kinase RAD54 DNA-repair gene 14-3-3 protein tau/theta G1/S-specific cyclin D1 cell division-associated protein BIMB. proliferating-cell nuclear antigen CKS-2 cyclin-dep kinases regulatory subunit 2 GADD45 gas1 SKCDC25 FLAP endonuclease-1; FEN-1 Cytoskeleton clip 170 (restin) septin 2 (NEDD5 PROTEIN) KIF4 kinesin-like protein neuraxin kinesin light chain 1 axonemal dynein heavy chain septin 4 (BRAIN PROTEIN H5) gelsolin myosin regulatory light chain 2, smooth muscle isoform NF2 neurofibromatosis type 2 isoform I Cell Adhesion and Extracellular matrix mast cell protease 5 precursor osteopontin neural cell adhesion molecule (NCAM- 140) anti-von Willebrand factor antibody NMC-4 kappa chain inter-alpha-inhibitor H2 galectin-3 extensin precursor E-selectin ligand-1 (ESL-1) microfibril associated glycoprotein precursor (MAGP) integrin beta-5 subunit precursor lectin lambda type IV collagenase Ion Transporters CMP-sialic acid transporter V-ATPase A AKR voltage-gated potassium-channel (KCNA4) potassium channel protein NGK2 AA030483 1.5 W51344 -1.9 X92346 -2.1 M13990 -2.1 AF177757 -2.2 P15408 -2.8 AA034842 -2.9 W51344 -3.4 W98059 -4.0 AA117183 -9.1 Z22552 -10.7 Accession fold-change X67083 45.7 D30743 2.3 X97796 1.9 W61758 1.7 P25322 1.7 AA165880 -1.5 AA088121 -1.7 X54942 -1.8 AA138777 -2.1 X65128 -2.5 Q02342 -4.1 AA072149 -7.5 Accession fold-change W13214 4.2 W51490 3.6 AA109999 3.4 AA048974 2.1 W81858 2.1 Z83815 1.9 AA020101 1.8 J04953 1.7 W18383 -4.5 X74671 -5.7 Accession fold-change AA032912 X51834 X07233 U90238 X70392 P16110 W75015 X84037 W08049 6.3 2.3 2.1 2.1 2.0 1.8 1.7 -1.6 -1.8 W14823 -2.0 U56734 -3.3 Z27231 -26.0 Accession fold-change Z71268 2.5 U13837 2.2 U03723 2.1 Y07521 2.0 Page 4 of 13 (page number not for citation purposes)