BMC Genomics 2006, 7:116 http://www.biomedcentral.com/1471-2164/7/116 PFrigoumroete1r1analysis results with different parameter specifications Promoter analysis results with different parameter specifications. Different numbers of conserved DNA sequence motifs found by the promoter analysis algorithm when different parameters were specified (x-axis: length in basepairs [bp]; number of mismatches allowed [mm]). Numbers of conserved motifs (Y-axis) that match known transcription factor binding sites are shown in green, with motifs that do not match known sites shown in orange. 2. 3. 4. 5. 6. 7. 8. 9. Hoffman SL: The genome sequence of the malaria mosquito Anopheles gambiae. Science 2002, 298:129-49. Hill CA, Kafatos FC, Stansfield SK, Collins FH: Arthropod-borne diseases: vector control in the genomics era. Nat Rev Microbiol 2005, 3:262-268. Marinotti O, Nguyen QK, Calvo E, James AA, Ribeiro JMC: Microar- ray analysis of genes showing variable expression following a bloodmeal in Anopheles gambiae. Insect Mol Biol 2005, 14:365-373. Marinotti O, Calvo E, Nguyen QK, Dissanayake S, Ribeiro JMC, James AA: Genome-wide analysis of gene expression in adult Anopheles gambiae. Insect Mol Biol 2006, 15:1-12. Ribeiro JM, Topalis P, Louis C: AnoXcel: an Anopheles gambiae protein database. Insect Mol Biol 2004, 13:449-457. Boyer RS, Moore JS: A fast string searching algorithm. Commu- nications of the ACM 1977, 20:762-772. Cerenius L, Söderhäll K: The prophenoloxidase-activating sys- tem in invertebrates. Immunol Rev 2004, 198:116-126. Dimopoulos G: Insect immunity and its implication in mos- quito-malaria interactions. Cell Microbiol 2003, 5:3-14. Li J, Riehle MM, Zhang Y, Xu J, Oduol F, Gomez SM, Eiglmeier K, Ueberheide BM, Shabanowitz J, Hunt DF, Ribeiro JM, Vernick KD: Anopheles gambiae genome reannotation throughsynthesis of ab initio and comparative gene prediction algorithms. Genome Biol 2006, 7:R24. Publish with Bio Med Central and every scientist can read your work free of charge "BioMed Central will be the most significant development for disseminating the results of biomedical research in our lifetime." Sir Paul Nurse, Cancer Research UK Your research papers will be: available free of charge to the entire biomedical community peer reviewed and published immediately upon acceptance cited in PubMed and archived on PubMed Central yours — you keep the copyright Submit your manuscript here: http://www.biomedcentral.com/info/publishing_adv.asp BioMedcentral Page 11 of 11 (page number not for citation purposes)