Herzig et al. BMC Genomics 2010, 11:100 http://www.biomedcentral.com/1471-2164/11/100 Page 13 of 19 Table 5 Classification of bovine TRDV1 cDNA sequences cDNA clone Accession Provisional IMGT Closest germline gene found in this name number1 nomenclature2 study3 Vdelta1.36 EF175175 NN TRDV1l BVd1.26 U73393 TRDV1S11 TRDV1m SB-C11 FJ907530 NN TRDV1af SB-C17 - NN TRDV1af BTDV27 D16114 TRDV1S14 TRDV1af BVd1.13 U73380 TRDV1S15 TRDV1a BTDV2 D13656 TRDV1S18 TRDV1a SB-B1 FJ907521 NN TRDV1a SB-C25 FJ907532 NN TRDV1a SB-C3 - NN TRDV1a BTDV4 D13660 TRDV1S13 TRDV1h SB-A5 FJ907519 NN TRDV1h SB-C1 FJ907526 NN TRDV1h SB-C15 - NN TRDV1h SB-A11 FJ907520 NN TRDV1h SB-C23 - NN TRDV1h SB-B7 FJ907524 NN TRDV1b BVd1.23 U73390 TRDV1S4 TRDV1b SB-C7 FJ907528 NN ND BTDV1 D16116 TRDV1S6 ND BTDV1 D13655 TRDV1S15 ND BVd1.14 U73381 TRDV1S7 ND SB-B6 FJ907523 NN ND BTDV8 D16112 TRDV1S12 ND SB-A7 - NN ND SB-B11 FJ907525 NN ND BTDV33 D13658 TRDV1S1 ND SB-C19 - NN ND BTDV3 D13657 TRDV1S16 ND SB-B3 FJ907522 NN ND BTDV28 D16115 TRDV1S17 ND BVd1.24 U73391 TRDV1S2 ND SB-C9 FJ907529 NN TRDV1an BVd1.16 U73383 TRDV1S9 TRDV1an BVd1.18 U73385 TRDV1S10 TRDV1an BVd1.15 U73382 TRDV1S3 TRDV1am SB-C5 FJ907527 NN TRDV1az5 SB-C13 - NN TRDV1az5 SB-A3 - NN TRDV1az BVd1.17 U73384 TRDV1S8 TRDV1az SB-A9 - NN TRDV1az SB-B9 - NN TRDV1az5 BVd1.21 U73388 TRDV1S23 TRDV1ax BVd1.20 U73387 TRDV1S22 TRDV1aa BTDV6 D13661 TRDV1S24 TRDV1r Vdelta1.37 EF175176 NN TRDV1aq Vdelta1.33 EF175171 NN ND BTDV26 D16113 TRDV1S25 ND BVd1.22 U73389 TRDV1S21 ND BVd1.25 U73392 TRDV1S5 ND Vdelta1.34 EF175172 NN ND Number of nucleotide differences4 5 6 1 1 4 2 2 5 5 4 1 6 1 1 2 1 5 0 2 1 5 0 4 4 1 1 2 4 1 2 1 46 TRDV set 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 3 3 3 4 5 5 5 7 7