Bao and Xu BMC Genomics 2011, 12:224 http://www.biomedcentral.com/1471-2164/12/224 Table 1 Classification of transcripts of known genes Seq. Name Seq. Description Length (bp) A. Metabolism & Energy HarDP-A209 enolase 325 HarDP-B843 atp synthase f0 subunit 6 183 HarDP-B170 cytochrome c oxidase subunit ii 656 HarDP-B1356 mitochondrial cytochrome c oxidase subunit 647 7c HarNP-1172 fructose-1,6 -bisphosphatase 1130 HarNP-475 aconitase HarNP-491 malate synthase HarNP-1261 apolipoprotein d HarNP-1246 lipase B. Stress Resistence HarDP-A355 heat shock protein 70 HarDP-C556 ferritin HarDP-C941 ferritin light chain HarDP- mn superoxide dismutase B1408 HarDP-A22 glutathione s-transferase HarDP-A112 bombyrin HarDP-A345 rad23 homolog b (cerevisiae) HarDP-C509 integrator complex subunit 3 C. Signal HarDP-C672 rac serine threonine kinase (Akt1) HarNP-1301 ca2+ calmodulin-dependent protein kinase II HarNP-138 arginine kinase D. Cell Cycle HarNP-668 cyclin-dependent kinase 8 HarNP-387 80 kda mcm3-associated protein HarNP-284 gtp-binding nuclear protein ran HarNP-831 MCM9 HarNP-1044 Septin 2 HarNP-798 transcription factor dp-2 F. Transcription & Translation HarDP-C1098 cg8378 cg8378-pa HarDP-A589 ubiquitin-like protein smt3(SUMO) HarNP-730 pleiomorphic adenoma gene 1 HarNP-642 elongation factor 1 delta HarNP-418 oocyte zinc finger protein xlcof22 HarNP-905 Reptin 475 449 1219 1204 304 514 899 624 234 330 400 467 630 1260 138 626 345 242 789 1002 756 1056 517 688 642 376 863 eValue Similarity Anotation Page 4 of 14 9.73E-55 99.20% 7.47E-15 94.70% 1.94E-65 93.80% 1.19E-19 68.10% 5.18E- 88.10% 157 1.62E-14 87.45% 1.57E-41 66.15% 1.84E-88 61.35% 4.22E-61 57.80% 4.96E-51 98.70% 1.09E-51 82.00% 7.25E-74 72.15% 2.60E-69 83.75% 1.43E-10 57.05% 1.98E-20 65.15% 9.49E-34 69.80% 3.28E-47 66.20% 1.20E-90 92.15% 5.45E-34 72.15% 1.32E-40 99.00% 4.85E-65 65.75% 3.43E-30 47.45% 1.61E-46 74.05% 4.59E-20 45.90% 5.91E-45 97.20% 6.44E-13 48.00% 3.49E-64 71.65% 1.88E-10 55.05% 1.44E-06 87.50% 1.70E-07 53.00% 1.66E-76 96.60% AKT1, insulin signaling longterm memory 2.41E-10 99.70% promote growth Glycolysis ATP synthesis respiratory chain generation of precusor metabolic and energy gluconeogenesis TCA Glyoxylate cycle lipid metabolic process Lipid degradation defense response antioxidation antioxidation antioxidation antioxidation antioxidation DNA repair DNA repair cell cycle DNA replication licensing factor modulates both spindle and nuclear envelope assembly DNA replication Required for the progression through mitosis involved in cell cycle regulation or DNA replication transcription repressor transcription regulation transcription activitor translation transcription regulation transcirption regulation Transcripts were classified according to the function of homologous genes in other species. The putatively up-regulated genes at diapause initiation are shown in italics, and the putatively down-regulated genes are shown in bold (HarDP-B843) is a key component of ATP synthase. Cytochrome c oxidase subunit 2 (HarDP-B170) and cytochrome c oxidase subunit 7C (COX7C, HarDP- B1356) are two components of the respiratory chain in mitochondria. Two genes related to lipid metabolism were found in the R library: HarNP-1261 and HarNP-1246 were down- regulated at diapause initiation. Apolipoprotein D (HarNP-1261) is closely associated with the enzyme lecithin:cholesterol acyltransferase and is involved in