# Patent

## Title
Imidazopyridine derivatives as inhibitors of receptor tyrosine kinases

## Abstract

The invention relates to new bicyclic heterocyclic derivative compounds, to pharmaceutical compositions comprising the compounds and to the use of the compounds in the treatment of diseases, e.g. cancer.

## Background
CROSS REFERENCE TO RELATED APPLICATIONS
This application is a national phase filing under 35 U.S.C. §371 of PCT International Application PCT/EP2009/057318, filed Jun. 12, 2009, and published under PCT Article 21(2) in English as WO 2009/150240 on Dec. 17, 2009. PCT/EP2009/057318 claimed priority from U.S. provisional patent application No. 61/061,184, filed on Jun. 13, 2008, and from GB 0810902.7, filed on Jun. 13, 2008. The entire contents of each of the prior applications are incorporated herein by reference.


FIELD OF THE INVENTION
The invention relates to new bicyclic heterocyclic derivative compounds, to pharmaceutical compositions comprising said compounds and to the use of said compounds in the treatment of diseases, e.g. cancer.
SUMMARY OF THE INVENTION
According to a first aspect of the invention there is provided a compound of formula (I):




wherein
(i) when R1 and R2 independently represent hydrogen or C3-8 cycloalkyl optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
A is a group Aa which represents an aromatic or non-aromatic carbocyclic or heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4a which represents an amino, halogen, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(ii) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ab which represents an aromatic 5 membered heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4a which represents an amino, halogen, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(iii) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ac which represents an aromatic 6 membered heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4b which represents an amino, halogen, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rc groups or when said heterocyclic group is other than pyrazolyl, oxadiazolyl or tetrazolyl said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups or when said heterocyclic group is pyrazolyl, oxadiazolyl or tetrazolyl said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rd groups or two or more (e.g. 2, 3 or 4) Rb groups;
(iv) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4c which is selected from any one of (a)-(h), (j)-(k), (m)-(u) and (w)-(y) which represent:
(a) an amino;
(b) —X—R6;
(c) phenyl substituted by one or more (e.g. 1, 2 or 3) C2-6 alkanol groups;
(d) pyridazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Re groups, or two or more (e.g. 2, 3 or 4) Rb groups;
(e) N-linked imidazolyl optionally substituted on the nitrogen atom or the C-2 or C-5 atoms by one or more (e.g. 1, 2 or 3) Rb groups or at the C-4 atom by one Re group;
(f) C-linked imidazolyl optionally substituted by one or two Rm groups on either or both of the nitrogen atoms or optionally substituted by one or two Re groups on one or two carbon atoms;
(g) pyrazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(h) thiophenyl substituted by one or more (e.g. 1, 2 or 3) Re groups;
(j) a bicyclic heterocyclic group containing a thiazolyl or thiadiazolyl ring optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(k) triazinyl optionally substituted by one or two Rb groups;
(m) pyrazolyl substituted by one or more (e.g. 1, 2 or 3) Rf groups;
(n) pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(o) pyrimidin-4-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rg groups or two or more (e.g. 2, 3 or 4) Rb groups;
(p) pyrimidin-5-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rp groups or two or more (e.g. 2, 3 or 4) Rb groups;
(q) thiadiazolyl substituted by one Rh group;
(r) pyridin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(s) pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups;
(t) pyridin-4-yl substituted by one or more (e.g. 1, 2 or 3) Rk groups or two or more (e.g. 2, 3 or 4) Rb groups;
(u) pyridin-3-yl substituted at the 2-position by —O—C1-6 alkyl and optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(w) oxo-dihydro-pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups;
(x) N-methylpyrazolyl optionally substituted by one or more (e.g. 1, 2 or 3) Rq groups;
(y) N-unsubstituted pyridin-3-yl substituted on one of the carbon atoms with a substituent from the group Rb and substituted on another carbon atom with a substituent from the group Ra;
(v) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents C1-6 alkyl;
R4 is a group R4d which represents C1-6 alkyl; or
(vi) when R1 represents hydrogen and R2 represents halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4e which represents unsubstituted pyridin-3-yl, unsubstituted pyridin-4-yl or 3-pyridinyl substituted with unsubstituted piperidine;
X represents —(CH2)q—, —CH═CH— or —C≡C—;
R5 represents —(CH2)s—NRxRy, C1-6 alkyl, C1-6 alkanol, C3-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
R6 represents —(CH2)s—NRxRy, C2-6 alkyl, C1-6 alkanol, C4-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
Rw, Rx, Ry and Rz independently represent hydrogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C1-6 alkanol, —COOC1-6 alkyl, hydroxy, C1-6 alkoxy, haloC1-6 alkyl, —(CH2)n—O—C1-6 alkyl, —CO—(CH2)n—C1-6 alkoxy, C1-6 alkylamino, —C1-6 alkyl-N(C1-6 alkyl)2, —C1-6 alkyl-NH(C1-6 alkyl), C3-8 cycloalkyl or C3-8 cycloalkenyl or when attached to a nitrogen atom, Rw, Rx, Ry and Rz may form a ring;
Ra represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy, —(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rb represents an Ra group or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Y represents a bond, —CO—(CH2)s—, —(CRxRy)s—CO—, —COO—, —(CH2)n—(CRxRy)s—, —NRx—(CH2)s—, —(CH2)s—NRx—, —CONRx—, —NRxCO—, —SO2NRx—, —NRxSO2—, —NRxCONRy—, —NRxCSNRy—, —O—(CH2)s—, —(CH2)s—O—, —S—, —SO— or —(CH2)s—SO2—;
Rc represents chlorine, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2), —SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rd represents halogen, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Re represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rf represents halogen, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C3-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —CH2—NRxRy, —(CH2)3-4—NRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s, —N(C1-6 alkyl)2, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)n—SO2NRxRy or —(CH2)s—SO2NHRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rg represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rh represents halogen, C3-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C4-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)2-4—O—C1-6 alkyl, —(CH2)n—O—C2-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C2-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rj represents chlorine, ethyl, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —O—C2 alkyl, —O—C4-6 alkyl, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COOC1-6 alkyl, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—NMe(C2-6 alkyl), —(CH2)s—N—(C2-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)s—SO2NRxRy, piperazine substituted by Rn, or a piperidinyl or a —O-piperidinyl group wherein said piperidinyl groups are substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rk represents chlorine, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, C2-6 alkoxy, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, O1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy), —COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rm represents halogen, C3-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rn represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rp represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups; a —Y-(4-membered heterocyclyl group) wherein said 4-membered heterocyclyl group is substituted by one or more (e.g. 1, 2 or 3) Ra groups; or a —Y-(5-10 membered heterocyclyl group) wherein said 5-10 membered heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rq represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C2-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —NH(C1-6alkyl), —N(C1-6alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
n and q independently represent an integer from 1-4;
s and t independently represent an integer from 0-4;
or a pharmaceutically acceptable salt, solvate or derivative thereof.
WO2008/078100 (Astex), WO2008/078091 (Astex), WO2009/047522 (Astex), WO2009/047506 (Astex), U.S. Pat. No. 7,074,801 (Eisai), US 2002/0041880 (Merck), WO 98/54093 (Merck), WO 2006/091671 (Eli Lilly), WO 2003/048132 (Merck), WO 2004/052286 (Merck), WO 00/53605 (Merck), WO 03/101993 (Neogenesis), WO 2006/135667 (BMS), WO 2002/46168 (Astra Zeneca), WO 2005/080330 (Chugai), WO 2006/094235 (Sirtris Pharmaceuticals), WO 2006/034402 (Synta Pharmaceuticals), WO 01/18000 (Merck), U.S. Pat. No. 5,990,146 (Warner Lambert) and WO 00/12089 (Merck) each disclose a series of heterocyclic derivatives.


DETAILED DESCRIPTION OF THE INVENTION
According to a first aspect of the invention there is provided a compound of formula (I):




wherein
(i) when R1 and R2 independently represent hydrogen or C3-8 cycloalkyl optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
A is a group Aa which represents an aromatic or non-aromatic carbocyclic or heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4a which represents an amino, halogen, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(ii) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ab which represents an aromatic 5 membered heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4a which represents an amino, halogen, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(iii) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ac which represents an aromatic 6 membered heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4b which represents an amino, halogen, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rc groups or when said heterocyclic group is other than pyrazolyl, oxadiazolyl or tetrazolyl said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups or when said heterocyclic group is pyrazolyl, oxadiazolyl or tetrazolyl said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rd groups or two or more (e.g. 2, 3 or 4) Rb groups;
(iv) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4c which is selected from any one of (a)-(h), (j)-(k), (m)-(u) and (w)-(y) which represent:
(a) an amino;
(b) —X—R6;
(c) phenyl substituted by one or more (e.g. 1, 2 or 3) C2-6 alkanol groups;
(d) pyridazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Re groups, or two or more (e.g. 2, 3 or 4) Rb groups;
(e) N-linked imidazolyl optionally substituted on the nitrogen atom or the C-2 or C-5 atoms by one or more (e.g. 1, 2 or 3) Rb groups or at the C4 atom by one Re group;
(f) C-linked imidazolyl optionally substituted by one or two Rm groups on either or both of the nitrogen atoms or optionally substituted by one or two Re groups on one or two carbon atoms;
(g) pyrazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(h) thiophenyl substituted by one or more (e.g. 1, 2 or 3) Re groups;
(j) a bicyclic heterocyclic group containing a thiazolyl or thiadiazolyl ring optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(k) triazinyl optionally substituted by one or two Rb groups;
(m) pyrazolyl substituted by one or more (e.g. 1, 2 or 3) Rf groups;
(n) pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(o) pyrimidin-4-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rg groups or two or more (e.g. 2, 3 or 4) Rb groups;
(p) pyrimidin-5-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rp groups or two or more (e.g. 2, 3 or 4) Rb groups;
(q) thiadiazolyl substituted by one Rh group;
(r) pyridin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(s) pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups;
(t) pyridin-4-yl substituted by one or more (e.g. 1, 2 or 3) Rk groups or two or more (e.g. 2, 3 or 4) Rb groups;
(u) pyridin-3-yl substituted at the 2-position by —O—C1-6 alkyl and optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(w) oxo-dihydro-pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups;
(x) N-methylpyrazolyl optionally substituted by one or more (e.g. 1, 2 or 3) Rq groups;
(y) N-unsubstituted pyridin-3-yl substituted on one of the carbon atoms with a substituent from the group Rb and substituted on another carbon atom with a substituent from the group Ra;
(v) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents C1-6 alkyl;
R4 is a group R4d which represents C1-6 alkyl; or
(vi) when R1 represents hydrogen and R2 represents halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4e which represents unsubstituted pyridin-3-yl, unsubstituted pyridin-4-yl or 3-pyridinyl substituted with unsubstituted piperidine;
X represents —(CH2)q—, —CH═CH— or —C≡C—;
R5 represents —(CH2)s—NRxRy, C1-6 alkyl, C1-6 alkanol, C3-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
R6 represents —(CH2)s—NRxRy, C2-6 alkyl, C1-6 alkanol, O4-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
Rw, Rx, Ry and Rz independently represent hydrogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C1-6 alkanol, —COOC1-6 alkyl, hydroxy, C1-6 alkoxy, haloC1-6 alkyl, —(CH2)n—O—C1-6 alkyl, —CO—(CH2)n—C1-6 alkoxy, C1-6 alkylamino, —C1-6 alkyl-N(C1-6 alkyl)2, —C1-6 alkyl-NH(C1-6 alkyl), C3-8 cycloalkyl or C3-8 cycloalkenyl or when attached to a nitrogen atom, Rw, Rx, Ry and Rz may form a ring;
Ra represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rb represents an Ra group or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Y represents a bond, —CO—(CH2)s—, —(CRxRy)s—CO—, —COO—, —(CH2)n—(CRxRy)s—, —NRx—(CH2)s—, —(CH2)s—NRx—, —CONRx—, —NRxCO—, —SO2NRx—, —NRxSO2—, —NRxCONRy—, —NRxCSNRy—, —O—(CH2)s—, —(CH2)s—O—, —S—, —SO— or —(CH2)s—SO2—;
Rc represents chlorine, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rd represents halogen, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Re represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rf represents halogen, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C3-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —CH2—NRxRy, —(CH2)3-4—NRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)n—SO2NRxRy or —(CH2)s—SO2NHRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rg represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rh represents halogen, C3-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, O4-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)2-4—O—C1-6 alkyl, —(CH2)n—O—C2-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C2-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRxRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rj represents chlorine, ethyl, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —O—C2 alkyl, —O—C4-6 alkyl, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, O1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COOC1-6 alkyl, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—NMe(C2-6 alkyl), —(CH2)s—N—(C2-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)s—SO2NRxRy, piperazine substituted by Rn, or a piperidinyl or a —O-piperidinyl group wherein said piperidinyl groups are substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rk represents chlorine, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, C2-6 alkoxy, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rm represents halogen, C3-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rn represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2), —SO2NRxRy groups;
Rp represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups; a —Y-(4-membered heterocyclyl group) wherein said 4-membered heterocyclyl group is substituted by one or more (e.g. 1, 2 or 3) Ra groups; or a —Y-(5-10 membered heterocyclyl group) wherein said 5-10 membered heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rq represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C2-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —NH(C1-6 alkyl), —N(C1-6alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)n—NxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
n and q independently represent an integer from 1-4;
s and t independently represent an integer from 0-4;
or a pharmaceutically acceptable salt, solvate or derivative thereof.
The prefix “Cx-y” (where x and y are integers) as used herein refers to the number of carbon atoms in a given group. Thus, a C1-6 alkyl group contains from 1 to 6 carbon atoms, a C3-6 cycloalkyl group contains from 3 to 6 carbon atoms, a O1-4 alkoxy group contains from 1 to 4 carbon atoms, and so on.
In each of the group (CRRy)n or (CRxRy)s the Rx and Ry groups can each be independently selected from the definitions of Rx and Ry for each CRxRy unit i.e. (CRxRy)n where n is 2, indicates CRxRy—CRxRy and each of Rx and Ry are selected independently from each other and from each of Rx and Ry in the other unit.
The term ‘C1-6 alkyl’ as used herein as a group or a part of the group refers to a linear or branched saturated hydrocarbon group containing from 1 to 6 carbon atoms. Examples of such groups include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert butyl, n-pentyl, isopentyl, neopentyl or hexyl and the like. The terms ‘C1-7alkyl’, ‘C2-6 alkyl’, ‘C3-6 alkyl’ or ‘C4-6 alkyl’ or C2 alkyl as used herein similarly define a group containing from 1 to 7, from 2 to 6, from 3 to 6, from 4 to 6, or 2 carbon atoms respectively.
The term ‘C2-6 alkenyl’ as used herein as a group or a part of the group refers to a linear or branched hydrocarbon group containing from 2 to 6 carbon atoms and containing a C═C bond.
The term ‘C2-6 alkynyl’ as used herein as a group or a part of the group refers to a linear or branched hydrocarbon group containing from 2 to 6 carbon atoms and containing a carbon—carbon triple bond.
The term ‘C1-6 alkoxy’ as used herein refers to an —O—C1-6 alkyl group wherein C1-6 alkyl is as defined herein. Examples of such groups include methoxy, ethoxy, propoxy, butoxy, pentoxy or hexoxy and the like. The term ‘C2-6 alkoxy’ used herein refer to an —O—C2-6 alkyl group wherein C2-6 alkyl is as defined herein.
The term ‘C1-6 alkanol’ as used herein refers to a C1-6 alkyl group substituted by one or more hydroxy groups, wherein C1-6 alkyl is as defined herein. The terms ‘C4-6 alkanol’, ‘C1-2 alkanol’ or ‘C3-6 alkanol’ as used herein similarly define a group containing from 4 to 6, from 1 to 2, or from 3 to 6, carbon atoms respectively, substituted by one or more hydroxyl groups. Examples of such groups include hydroxymethyl, hydroxyethyl, hydroxypropyl and the like.
The term ‘C3-8 cycloalkyl’ as used herein refers to a saturated monocyclic hydrocarbon ring of 3 to 8 carbon atoms. Examples of such groups include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl or cyclooctyl and the like.
The term ‘C3-6 cycloalkyl’ as used herein refers to a saturated monocyclic hydrocarbon ring of 3 to 6 carbon atoms. Examples of such groups include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, and the like.
The term ‘C4-8 cycloalkyl’ as used herein refers to a saturated monocyclic hydrocarbon ring of 4 to 8 carbon atoms. Examples of such groups include cyclobutyl, cyclopentyl, cyclohexyl, and the like.
The term ‘C3-8 cycloalkenyl’ as used herein refers to a non-aromatic monocyclic hydrocarbon ring of 3 to 8 carbon atoms and containing one or more C═C bonds. Examples of such groups include cyclopropene, cyclobutene, cyclopentene, cyclohexene, cycloheptene or cyclooctene and the like.
The term ‘halogen’ as used herein refers to a fluorine, chlorine, bromine or iodine atom.
The term ‘haloC1-6 alkyl’ as used herein refers to a C1-6 alkyl group as defined herein wherein at least one hydrogen atom is replaced with halogen. The term ‘haloC2-6 alkyl’ as used herein similarly defines a group containing from 2 to 6 carbon atoms wherein at least one hydrogen atom is replaced with halogen. Examples of such groups include fluoroethyl, trifluoromethyl or trifluoroethyl and the like.
The term ‘haloC1-6 alkoxy’ as used herein refers to a C1-6 alkoxy group as herein defined wherein at least one hydrogen atom is replaced with halogen. Examples of such groups include difluoromethoxy or trifluoromethoxy and the like.
References to “carbocyclic” and “heterocyclic” groups as used herein shall, unless the context indicates otherwise, include both aromatic and non-aromatic ring systems. Thus, for example, the term “carbocyclic and heterocyclic groups” includes within its scope aromatic, non-aromatic, unsaturated, partially saturated and fully saturated carbocyclic and heterocyclic ring systems. In general, such groups may be monocyclic or bicyclic and may contain, for example, 3 to 12 ring members, more usually 5 to 10 ring members. Examples of monocyclic groups are groups containing 3, 4, 5, 6, 7, and 8 ring members, more usually 3 to 7, and preferably 5 or 6 ring members. Examples of bicyclic groups are those containing 8, 9, 10, 11 and 12 ring members, and more usually 9 or 10 ring members. Where reference is made herein to carbocyclic and heterocyclic groups, the carbocyclic or heterocyclic ring can, unless the context indicates otherwise, be unsubstituted or substituted by one or more substituents for example molecular fragments, molecular scaffolds or functional groups as discussed herein. It will be appreciated that references to “carbocyclic” and “heterocyclic” groups include reference to carbocyclic and heterocyclic groups which may be optionally substituted by one or more (e.g. 1, 2 or 3) groups as indicated above.
The carbocyclic or heterocyclic groups can be aryl or heteroaryl groups having from 5 to 12 ring members, more usually from 5 to 10 ring members. The term “aryl” as used herein refers to a carbocyclic group having aromatic character and the term “heteroaryl” is used herein to denote a heterocyclic group having aromatic character. The terms “aryl” and “heteroaryl” embrace polycyclic (e.g. bicyclic) ring systems wherein one or more rings are non-aromatic, provided that at least one ring is aromatic. In such polycyclic systems, the group may be attached by the aromatic ring, or by a non-aromatic ring.
The term “non-aromatic group” embraces unsaturated ring systems without aromatic character, partially saturated and fully saturated carbocyclic and heterocyclic ring systems. The terms “unsaturated” and “partially saturated” refer to rings wherein the ring structure(s) contains atoms sharing more than one valence bond i.e. the ring contains at least one multiple bond e.g. a C═C, C≡C or N═C bond. The term “fully saturated” refers to rings where there are no multiple bonds between ring atoms. Saturated carbocyclic groups include cycloalkyl groups as defined below. Partially saturated carbocyclic groups include cycloalkenyl groups as defined below, for example cyclopentenyl, cyclohexenyl, cycloheptenyl and cyclooctenyl. Saturated heterocyclic groups include piperidine, morpholine, thiomorpholine. Partially saturated heterocyclic groups include pyrazolines, for example 2-pyrazoline and 3-pyrazoline.
Examples of heteroaryl groups are monocyclic and bicyclic groups containing from five to twelve ring members, and more usually from five to ten ring members. The heteroaryl group can be, for example, a five membered or six membered monocyclic ring or a bicyclic structure formed from fused five and six membered rings or two fused six membered rings, or two fused five membered rings. Each ring may contain up to five, e.g. about four, heteroatoms typically selected from nitrogen, sulphur and oxygen. Typically the heteroaryl ring will contain up to 4 heteroatoms, more typically up to 3 heteroatoms, more usually up to 2, for example a single heteroatom. In one embodiment, the heteroaryl ring contains at least one ring nitrogen atom. The nitrogen atoms in the heteroaryl rings can be basic, as in the case of an imidazole or pyridine, or essentially non-basic as in the case of an indole or pyrrole nitrogen. In general the number of basic nitrogen atoms present in the heteroaryl group, including any amino group substituents of the ring, will be less than five.
Examples of five membered heteroaryl groups include but are not limited to pyrrole, furan, thiophene, imidazole, furazan, oxazole, oxadiazole, oxatriazole, isoxazole, thiazole, isothiazole, pyrazole, triazole and tetrazole groups. One further example of a five membered heteroaryl group includes thiadiazole.
Examples of six membered heteroaryl groups include but are not limited to pyridine, pyrazine, pyridazine, pyrimidine and triazine.
A bicyclic heteroaryl group may be, for example, a group selected from:

    
    
        a) a benzene ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms;
        b) a pyridine ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms;
        c) a pyrimidine ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        d) a pyrrole ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms;
        e) a pyrazole ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        f) an imidazole ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        g) an oxazole ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        h) an isoxazole ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        i) a thiazole ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        j) an isothiazole ring fused to a 5- or 6-membered ring containing 1 or 2 ring heteroatoms;
        k) a thiophene ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms;
        l) a furan ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms;
        m) a cyclohexyl ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms; and
        n) a cyclopentyl ring fused to a 5- or 6-membered ring containing 1, 2 or 3 ring heteroatoms.
    
    


Particular examples of bicyclic heteroaryl groups containing a five membered ring fused to another five membered ring include but are not limited to imidazothiazole (e.g. imidazo[2,1-b]thiazole) and imidazoimidazole (e.g. imidazo[1,2-a]imidazole).
Particular examples of bicyclic heteroaryl groups containing a six membered ring fused to a five membered ring include but are not limited to benzofuran, benzthiophene, benzimidazole, benzoxazole, isobenzoxazole, benzisoxazole, benzthiazole, benzisothiazole, isobenzofuran, indole, isoindole, indolizine, indoline, isoindoline, purine (e.g., adenine, guanine), indazole, pyrazolopyrimidine (e.g. pyrazolo[1,5-a]pyrimidine), triazolopyrimidine (e.g. [1,2,4]triazolo[1,5-a]pyrimidine), benzodioxole and pyrazolopyridine (e.g. pyrazolo[1,5-a]pyridine) groups. One further example of a bicyclic heteroaryl group containing a six membered ring fused to a five membered ring includes imidazopyridine.
Particular examples of bicyclic heteroaryl groups containing two fused six membered rings include but are not limited to quinoline, isoquinoline, chroman, thiochroman, chromene, isochromene, chroman, isochroman, benzodioxan, quinolizine, benzoxazine, benzodiazine, pyridopyridine, quinoxaline, quinazoline, cinnoline, phthalazine, naphthyridine and pteridine groups.
Examples of polycyclic aryl and heteroaryl groups containing an aromatic ring and a non-aromatic ring include tetrahydronaphthalene, tetrahydroisoquinoline, tetrahydroquinoline, dihydrobenzthiene, dihydrobenzfuran, 2,3-dihydro-benzo[1,4]dioxine, benzo[1,3]dioxole, 4,5,6,7-tetrahydrobenzofuran, indoline and indane groups. One further example of a polycyclic heteroaryl group containing an aromatic ring and a non-aromatic ring includes tetrahydrotriazolopyrazine (e.g. 5,6,7,8-tetrahydro-[1,2,4]triazolo[4,3-a]pyrazine).
A nitrogen-containing heteroaryl ring must contain at least one ring nitrogen atom. Each ring may, in addition, contain up to about four other heteroatoms typically selected from nitrogen, sulphur and oxygen. Typically the heteroaryl ring will contain up to 3 heteroatoms, for example 1, 2 or 3, more usually up to 2 nitrogens, for example a single nitrogen. The nitrogen atoms in the heteroaryl rings can be basic, as in the case of an imidazole or pyridine, or essentially non-basic as in the case of an indole or pyrrole nitrogen. In general the number of basic nitrogen atoms present in the heteroaryl group, including any amino group substituents of the ring, will be less than five.
Examples of nitrogen-containing heteroaryl groups include, but are not limited to, pyridyl, pyrrolyl, imidazolyl, oxazolyl, oxadiazolyl, thiadiazolyl, oxatriazolyl, isoxazolyl, thiazolyl, isothiazolyl, furazanyl, pyrazolyl, pyrazinyl, pyrimidinyl, pyridazinyl, triazinyl, triazolyl (e.g., 1,2,3-triazolyl, 1,2,4-triazolyl), tetrazolyl, quinolinyl, isoquinolinyl, benzimidazolyl, benzoxazolyl, benzisoxazole, benzthiazolyl and benzisothiazole, indolyl, 3H-indolyl, isoindolyl, indolizinyl, isoindolinyl, purinyl (e.g., adenine[6-aminopurine], guanine[2-amino-6-hydroxypurine]), indazolyl, quinolizinyl, benzoxazinyl, benzodiazinyl, pyridopyridinyl, quinoxalinyl, quinazolinyl, cinnolinyl, phthalazinyl, naphthyridinyl and pteridinyl.
Examples of nitrogen-containing polycyclic heteroaryl groups containing an aromatic ring and a non-aromatic ring include tetrahydroisoquinolinyl, tetrahydroquinolinyl, and indolinyl.
Examples of carbocyclic aryl groups include phenyl, naphthyl, indenyl, and tetrahydronaphthyl groups.
Examples of non-aromatic heterocyclic groups are groups having from 3 to 12 ring members, more usually 5 to 10 ring members. Such groups can be monocyclic or bicyclic, for example, and typically have from 1 to 5 heteroatom ring members (more usually 1, 2, 3 or 4 heteroatom ring members), usually selected from nitrogen, oxygen and sulphur. The heterocyclic groups can contain, for example, cyclic ether moieties (e.g. as in tetrahydrofuran and dioxane), cyclic thioether moieties (e.g. as in tetrahydrothiophene and dithiane), cyclic amine moieties (e.g. as in pyrrolidine), cyclic amide moieties (e.g. as in pyrrolidone), cyclic thioamides, cyclic thioesters, cyclic ureas (e.g. as in imidazolidin-2-one) cyclic ester moieties (e.g. as in butyrolactone), cyclic sulphones (e.g. as in sulpholane and sulpholene), cyclic sulphoxides, cyclic sulphonamides and combinations thereof (e.g. thiomorpholine).
Particular examples include morpholine, piperidine (e.g. 1-piperidinyl, 2-piperidinyl, 3-piperidinyl and 4-piperidinyl), piperidone, pyrrolidine (e.g. 1-pyrrolidinyl, 2-pyrrolidinyl and 3-pyrrolidinyl), pyrrolidone, azetidine, pyran (2H-pyran or 4H-pyran), dihydrothiophene, dihydropyran, dihydrofuran, dihydrothiazole, tetrahydrofuran, tetrahydrothiophene, dioxane, tetrahydropyran (e.g. 4-tetrahydro pyranyl), imidazoline, imidazolidinone, oxazoline, thiazoline, 2-pyrazoline, pyrazolidine, piperazone, piperazine, and N-alkyl piperazines such as N-methyl piperazine. In general, preferred non-aromatic heterocyclic groups include saturated groups such as piperidine, pyrrolidine, azetidine, morpholine, piperazine and N-alkyl piperazines.
In a nitrogen-containing non-aromatic heterocyclic ring the ring must contain at least one ring nitrogen atom. The heterocylic groups can contain, for example cyclic amine moieties (e.g. as in pyrrolidine), cyclic amides (such as a pyrrolidinone, piperidone or caprolactam), cyclic sulphonamides (such as an isothiazolidine 1,1-dioxide, [1,2]thiazinane 1,1-dioxide or [1,2]thiazepane 1,1-dioxide) and combinations thereof.
Particular examples of nitrogen-containing non-aromatic heterocyclic groups include aziridine, morpholine, thiomorpholine, piperidine (e.g. 1-piperidinyl, 2-piperidinyl, 3-piperidinyl and 4-piperidinyl), pyrrolidine (e.g. 1-pyrrolidinyl, 2-pyrrolidinyl and 3-pyrrolidinyl), pyrrolidone, dihydrothiazole, imidazoline, imidazolidinone, oxazoline, thiazoline, 6H-1,2,5-thiadiazine, 2-pyrazoline, 3-pyrazoline, pyrazolidine, piperazine, and N-alkyl piperazines such as N-methyl piperazine.
The carbocyclic and heterocyclic groups can be polycyclic fused ring systems or bridged ring systems such as bicycloalkanes, tricycloalkanes and their oxa- and aza analogues (e.g. adamantane and oxa-adamantane). For an explanation of the distinction between fused and bridged ring systems, see Advanced Organic Chemistry, by Jerry March, 4th Edition, Wiley Interscience, pages 131-133, 1992.
Examples of non-aromatic carbocyclic groups include cycloalkane groups such as cyclohexyl and cyclopentyl, cycloalkenyl groups such as cyclopentenyl, cyclohexenyl, cycloheptenyl and cyclooctenyl, as well as cyclohexadienyl, cyclooctatetraene, tetrahydronaphthenyl and decalinyl.
The heterocyclic groups can each be unsubstituted or substituted by one or more substituent groups. For example, heterocyclic groups can be unsubstituted or substituted by 1, 2, 3 or 4 substituents. Where the heterocyclic group is monocyclic or bicyclic, typically it is unsubstituted or has 1, 2 or 3 substituents.
References to “N-linked imidazolyl” refer to an imidazolyl group linked to the carbon atom of the imidazo[1,2-a]pyridin-3-yl ring system by one of the nitrogen atoms of the imidazolyl group. Examples of N-linked imidazolyl groups include imidazol-1-yl.
References to “C-linked imidazolyl” refer to an imidazolyl group linked to the carbon atom of the imidazo[1,2-a]pyridin-3-yl ring system by one of the carbon atoms of the imidazolyl group.
Particular Embodiments of the Invention
Examples of ring systems encompassed by the definition Aa are shown in the following formulae (I)A-(I)O, wherein the nitrogen atom demonstrates the point of attachment with the urea group:










The group (I)L can be any tautomer of imidazole e.g. (I)L2.
In one embodiment, Aa or Ab is a group other than pyrazole.
In one embodiment, Aa is selected from (I)A, (I)B, (I)P and (I)Q.
In one embodiment, A is the group (I)A which can be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In one embodiment, Aa represents a monocyclic aromatic carbocyclic or heterocyclic ring system having for example a 5, 6 or 7 membered ring (e.g. phenyl, pyridyl or thiazolyl).
In a further embodiment, Aa represents a 6 membered carbocyclic ring. In a yet further embodiment, Aa represents a phenyl group (i.e. a ring system of formula (I)A optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In a further embodiment, Aa or Ac represents a pyridyl group (i.e. a ring system of formula (I)B or (I)C) optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups. In a yet further embodiment, Aa or Ac represents a ring system of formula (I)B optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In a one embodiment, Aa or Ab represents a thiazolyl group, isothiazole group or imidazole group optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In a further embodiment, Aa or Ab represents a thiazolyl group (i.e. a ring system of formula (I)H, (I)P or (I)Q) optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In a yet further embodiment, Aa or Ab represents a ring system of formula (I)P or (I)Q optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups e.g. halogen (e.g. chlorine).
In one embodiment, Aa or Ac or Ad represents a 6 membered monocyclic aromatic carbocyclic or heterocyclic ring system (e.g. phenyl or pyridyl), substituted by —NHCONR1R2 at the 3-position or 5-position.
Also disclosed is, Aa or Ac or Ad represents a 6 membered monocyclic aromatic carbocyclic or heterocyclic ring system (e.g. phenyl or pyridyl), substituted by —NHCONR1R2 at the 5-position and further optionally substituted by a single Ra group at the 3-position.
In one embodiment, Aa or Ac represents a 6 membered monocyclic aromatic carbocyclic or heterocyclic ring system (e.g. phenyl or pyridyl), substituted by —NHCONR1R2 at the 5-position and further optionally substituted by a single Ra group at the 3-position, or Ad represents a 6 membered monocyclic aromatic carbocyclic ring system (e.g. phenyl), substituted by —NHCONR1R2 at the 5-position and further optionally substituted by a single Ra group at the 3-position.
In one embodiment, Aa or Ad represents unsubstituted phenyl or phenyl substituted with an —(CH2)s—CONRxRy (e.g. —CONH2), —(CH2)s—CN (e.g. —CN), halogen (e.g. fluorine), C1-6 alkyl (e.g. methyl), C1-6 alkanol (e.g. —CH2OH) or —ORx (e.g. methoxy or —OCH(Me)2) group.
In one embodiment, Ad represents unsubstituted phenyl or phenyl substituted with an —(CH2)s—CONRxRy (e.g. —CONH2), —(CH2)s, —CN (e.g. —CN), halogen (e.g. fluorine, chlorine, bromine), C1-6 alkyl (e.g. methyl), C1-6 alkanol (e.g. —CH2OH), —O—(CH2)n—ORx (e.g. —O—CH2—CH2—O—CH3), —(CRxRy)s—COORz (e.g. —COOCH3), —(CH2)s—NRxRy (e.g. —CH2NH2), haloC1-6 alkyl (e.g. trifluoromethyl) or —ORx (e.g. —OH or methoxy or —OCH(Me)2 or —OCH5H9) group.
In a further embodiment, Aa or Ad represents unsubstituted phenyl.
In one embodiment, Aa is as defined in Ab. In another embodiment, Aa is as defined in A.
In another embodiment, Aa is as defined in Ad.
Also disclosed is, R1 represents hydrogen or C1-6 alkyl (e.g. methyl) and R2 represents hydrogen, C1-6 alkyl (e.g. methyl, ethyl, butyl, —CH(Me)2, —CH2CH(Me)2 or —C(Me)3), C1-6 alkyl substituted by one or more Ra groups (e.g. —CH2—C(Me)2—CH2—NH2, —CH2—CH(Me)-OMe or —CH2—C(F)2—CH2NH2), C3-8 cycloalkyl (e.g. cyclopropyl), C1-6 alkanol (e.g. —CH2—CH(OH)—CH2OH), —(CH2)n—NRxRy (e.g. —(CH2)2NHCOOt-Bu, —(CH2)2NH2 or —(CH2)3NH2), —(CH2)n-aryl (e.g. benzyl optionally substituted by a halogen atom, such as a fluorine atom), —(CH2)n-heterocyclyl (e.g. —CH2-dioxaolanyl (optionally substituted by one or more C1-6 alkyl (e.g. methyl) groups), —CH2-tetrahydrofuranyl or —CH2-piperidinyl) or haloC1-6 alkyl (e.g. —(CH2)2—F, —CH2—CH—F2—CH(Me)-CF3 or —CH2—CF3).
In one embodiment, R1 represents hydrogen or C1-6 alkyl (e.g. methyl) and R2 represents hydrogen, C1-6 alkyl (e.g. methyl, ethyl, butyl, —CH(Me)2, —CH2CH(Me)2 or —C(Me)3), C3-8 cycloalkyl (e.g. cyclopropyl) or haloC1-6 alkyl (e.g. —(CH2)2—F, —CH2—CH—F2—CH(Me)-CF3 or —CH2—CF3).
Also disclosed is, when A represents phenyl, R1 and R2 represent a group other than phenyl.
In a further embodiment, R1 represents hydrogen and R2 represents hydrogen, C1-6 alkyl (e.g. methyl, ethyl, butyl, —CH(Me)2, —CH2CH(Me)2 or —C(Me)3), C3-8 cycloalkyl (e.g. cyclopropyl), or haloC1-6 alkyl (e.g. —(CH2)2—F, —CH2—CH—F2—CH(Me)-CF3 or —CH2—CF3). In a yet further embodiment, R1 represents hydrogen and R2 represents C1-6 alkyl (e.g. ethyl), C3-8 cycloalkyl (e.g. cyclopropyl), or haloC1-6 alkyl (e.g.—CH2—CF3). In a yet further embodiment, R1 represents hydrogen and R2 represents —CH2—CF3.
In one embodiment, R3 represents hydrogen or methyl. In a further embodiment, R3 represents hydrogen.
In one embodiment, when R1 and R2 independently represent hydrogen or C3-8 cycloalkyl (e.g. R1 represents hydrogen and R2 represents cyclopropyl or R1 and R2 both represent hydrogen), R4a represents halogen (e.g. chlorine) or a monocyclic aromatic carbocyclic group (e.g. phenyl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as halogen (e.g. fluorine) or R4a represents an aromatic heterocyclic group (e.g. a pyrimidinyl) which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups such as halogen (e.g. fluorine) or —(CH2)sNRxRy (e.g. —NH2).
In one embodiment, when R1 and R2 independently represent hydrogen or C3-8 cycloalkyl (e.g. R1 represents hydrogen and R2 represents cyclopropyl or R1 and R2 both represent hydrogen), R4a represents —X—R5 a further embodiment X represents —C≡C— and R5 represents an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups. In a still further embodiment R5 represents an imidazoyl substituted with one methyl group.
In one embodiment, when R1 and R2 independently represent hydrogen or C3-8 cycloalkyl (e.g. R1 represents hydrogen and R2 represents cyclopropyl or R1 and R2 both represent hydrogen), R4a represents an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups. In one embodiment R1 and R2 both represent hydrogen and R4a represents an aromatic or non-aromatic heterocyclic group (e.g. an oxadiazolyl, thiadiazolyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) methyl groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), Ab represents pyrrole, furan, thiophene, imidazole, furazan, oxazole, oxadiazole, oxatriazole, isoxazole, thiazole, isothiazole, pyrazole, triazole, thiadiazole or tetrazole optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups. In a further embodiment, Ab represents pyrrole, imidazole, furazan, oxazole, oxadiazole, oxatriazole, isoxazole, thiazole, isothiazole, pyrazole, triazole, thiadiazole or tetrazole optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups. In a yet further embodiment, Ab represents thiazole optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups (e.g. chlorine).
In one embodiment when, R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl (e.g. ethyl or —CH2—CF3), A is a group Ac which represents an aromatic 6 membered heterocyclic group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups and R4 is a group R4b which represents —X—R5. In a further embodiment Ac represents a pyridinyl. In a further embodiment X represents —C≡C— and R5 represents an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups (e.g. an imidazolyl substituted by one or methyl groups).
In one embodiment the compound of formula (I) is as defined in (i).
In one embodiment the compound of formula (I) is as defined in (ii).
In one embodiment the compound of formula (I) is as defined in (iii).
In one embodiment the compound of formula (I) is as defined in (iv).
In one embodiment the compound of formula (I) is as defined in (v).
In one embodiment the compound of formula (I) is as defined in (vi).
In one embodiment when R4 is a group R4a, R4a is as defined in R4b.
In one embodiment when R4 is a group R4a, R4a is as defined in R4c.
In one embodiment when R4 is a group R4a, R4a is as defined in R4d.
In one embodiment when R4 is a group R4a, R4a is as defined in R4e.
In one embodiment when R4 is a group R4b, R4b is as defined in R4c.
In one embodiment when R4 is a group R4b, R4b is as defined in R4d.
In one embodiment when R4 is a group R4b, R4b is as defined in R4e.
In one embodiment when R4 is a group R4c, R4c is selected from (b)-(h), (j)-(k), (m)-(u) and (w)-(y).
In one embodiment when R4 is a group R4c, R4c is —X—R6.
In one embodiment when R4 is a group R4c, R4c is phenyl substituted by one or more (e.g. 1, 2 or 3) C2-6 alkanol groups.
In one embodiment when R4 is a group R4c, R4c is pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Re groups.
In one embodiment when R4 is a group R4c, R4c is pyridazinyl (e.g. pyridazin-3-yl or pyridazin-4-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Re groups.
In one embodiment when R4 is a group R4c, R4c is pyrazinyl (e.g. pyrazin-2-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups.
In one embodiment when R4 is a group R4c, R4c is thiophenyl (e.g. thien-3-yl) substituted by one or more (e.g. 1, 2 or 3) Re groups.
In one embodiment when R4 is a group R4c, R4c is pyrazolyl (e.g. pyrazol-4-yl) substituted by one or more (e.g. 1, 2 or 3) Rf groups.
Also disclosed is when R4 is a group R4c, R4c is thiadiazolyl (e.g. [1,3,4]thiadiazol-2-yl) substituted by one or more (e.g. 1, 2 or 3) Rh groups.
In one embodiment when R4 is a group R4c, R4c is thiadiazolyl (e.g. [1,3,4]thiadiazol-2-yl) substituted by one Rh group.
In one embodiment R4c is thiadiazolyl substituted by one —(CH2)2-4—O—C1-6alkyl (e.g. —CH2CH2—O—CH3). or C2-6alkanol (e.g. —CH2CH2OH).
In one embodiment when R4 is a group R4c, R4c is oxo-dihydro-pyridin-3-yl (e.g. 6-oxo-1,6-dihydro-pyridin-3-yl) substituted by one or more (e.g. 1, 2 or 3) Rj groups.
In one embodiment, Rj represents chlorine, ethyl, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —O—C2 alkyl, —O—C4-6 alkyl, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COOC1-6 alkyl, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—NMe(C2-6 alkyl), —(CH2)s—N—(C2-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)s—SO2NRXRy, piperazine substituted by Rn, or a piperidinyl, or a —O-piperidinyl group wherein said piperidinyl group is substituted by one or more (e.g. 1, 2 or 3) Ra groups;
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4a represents halogen (e.g. chlorine).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), Ac represents pyridinyl (e.g. pyridin-3-yl).
In one embodiment, when R1 and R2 independently represent hydrogen or C3-8cycloalkyl, R4a represents oxadiazole, thiadiazole or pyrimidine optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4a represents oxadiazole, thiadiazole or pyrimidine optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In one embodiment when R4 is a group R4a, R4a is phenyl substituted by one or more (e.g. 1, 2 or 3) Rb groups.
In one embodiment when R4 is a group R4a, R4a is phenyl substituted by one or more (e.g. 1, 2 or 3) Ra groups.
In one embodiment the Ra or Rb group is at the 3- or 4-position of the phenyl ring, in particular at the 4-position of the phenyl ring.
In one embodiment when R4 is a group R4a, R4a is phenyl substituted by one or more (e.g. 1, 2 or 3) halogen (e.g. fluorine) groups.
In a further embodiment, R4a represents 4-fluoro-phenyl.
In one embodiment when R4 is a group R4a, R4a is pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4b represents an aromatic heterocyclic group (e.g. pyrrole, furan, thiophene, imidazole, furazan, oxazole, oxadiazole, oxatriazole, isoxazole, thiazole, isothiazole, pyrazole, triazole, tetrazole, thiadiazole, pyridine, pyrazine, pyridazine, pyrimidine or triazine) optionally substituted by one or more (e.g. 1, 2 or 3) Rd groups. In a further embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4b represents an aromatic heterocyclic group (e.g. pyridine, pyrazine, pyridazine, pyrimidine or triazine) optionally substituted by one or more (e.g. 1, 2 or 3) Rd groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4b represents an aromatic heterocyclic group (e.g. a pyrimidin-2-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups (such as fluorine or NH2). In a further embodiment A is a group Ac which represents an aromatic six membered heterocyclic group (e.g. a pyridinyl). In a still further embodiment R3 is hydrogen.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4b represents halogen (e.g. chlorine), —X—R5 (e.g. —C≡C-cyclopropyl) or an aromatic heterocyclic group (e.g. pyridazinyl, thiadiazolyl, pyrimidinyl or pyrazolyl) optionally substituted by one or more (e.g. 1, 2 or 3) Rd groups such as C1-6 alkyl (e.g. methyl), —Y-heterocyclyl (e.g. -piperidinyl or -azetidinyl) wherein said —Y-heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups (such as —COO-t-Bu).
In one embodiment, R4b represents unsubstituted thiadiazole, unsubstituted pyridinyl (e.g. pyridin-2-yl), unsubstituted pyrimidinyl (e.g. pyrimidin-2-yl) or pyridazinyl (e.g. pyridazin-3-yl) optionally substituted with C1-6 alkyl (e.g. methyl).
In one embodiment, R4b represents unsubstituted thiadiazole, unsubstituted pyridinyl (e.g. pyridin-2-yl), unsubstituted pyrimidinyl (e.g. pyrimidin-2-yl), pyridazinyl (e.g. pyridazin-3-yl) optionally substituted with C1-6alkyl (e.g. methyl) or pyrazolyl substituted with Y-heterocyclyl (e.g. where Y is a bond).
In one embodiment, when R1 represents hydrogen and R2 represents hydrogen or C1-6 alkyl (e.g. ethyl), R4b represents a group other than chlorine.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents an amino (e.g. —NH2) group. In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents an amino group other than —NH2.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrazolyl substituted by one or more (e.g. 1, 2 or 3) Rf groups such as C1-6 alkyl (e.g. methyl), C1-6 alkanol (e.g. —C(Me)2-CH2—OH), —(CRxRy)s—COORz (e.g. —C(Me)2-COOH or —C(Me)2-COO-Et), —(CH2)s—NRxRy (e.g. —CH2—NH2), —(CRxRy)s—CONRwRz (e.g. —C(Me)2-CONH2, —C(Me)2-CONHMe, —C(Me)2-CON(Me)2, —C(Me)2-CONH-cyclopropyl, —C(Me)2-CONH—(CH2)2—N(Et)2), Y-heterocyclyl (e.g. pyrrolidinyl, tetrahydrofuranyl, piperidinyl, azetidinyl or —C(Me)2-CO-azetidinyl) wherein said —Y-heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) C1-6 alkyl (e.g. methyl, ethyl or isopropyl), —CORx (e.g. —COMe), —(CRxRy)s—COORz (e.g. —COO-t-Bu) or —SO2—Rx (e.g. —SO2Me).
Also disclosed is, when R1 represents hydrogen, R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3) and R4c represents pyrazolyl optionally substituted by one or more (e.g. 1, 2 or 3) Rf groups such as C1-6 alkyl (e.g. methyl), C1-6 alkanol (e.g. —C(Me)2—CH2—OH), —(CRxRy)s—COORz (e.g. —C(Me)2-COOH or —C(Me)2-COO-Et), —(CRxRy)s—CONRwRz (e.g. —C(Me)2-CONH2, —C(Me)2-CONHMe, —C(Me)2-CON(Me)2, —C(Me)2—CONH—(CH2)2—N(Et)2), Y-heterocyclyl (e.g. pyrrolidinyl, tetrahydrofuranyl, piperidinyl, azetidinyl or —C(Me)2-CO-azetidinyl) wherein said —Y-heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) C1-6 alkyl (e.g. methyl, ethyl or isopropyl), —CORx (e.g. —COMe) or —SO2—Rx (e.g. —SO2Me).
Also disclosed is, when R1 represents hydrogen, R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3) and R4c represents pyrazolyl substituted by one or more (e.g. 1, 2 or 3) Rf groups such as C1-6 alkyl (e.g. methyl), C1-6 alkanol (e.g. —C(Me)2-CH2—OH), —(CRxRy)s—COORz (e.g. —C(Me)2-COOH or —C(Me)2-COO-Et), —(CRxRy)s—CONRwRz (e.g. —C(Me)2-CONH2, —C(Me)2-CONHMe, —C(Me)2-CON(Me)2, —C(Me)2-CONH—(CH2)2—N(Et)2), Y-heterocyclyl (e.g. pyrrolidinyl, tetrahydrofuranyl, piperidinyl, azetidinyl or —C(Me)2-CO-azetidinyl) wherein said —Y-heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) C1-6 alkyl (e.g. methyl, ethyl or isopropyl), —CORx (e.g. —COMe), —SO2—Rx (e.g. —SO2Me) or C1-6alkanol (e.g. —CH2—CH2—OH) groups.
In one embodiment, when R1 represents hydrogen, R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3) and R4c represents pyrazolyl substituted by one or more (e.g. 1, 2 or 3) Rf groups such as C4-6 alkyl, C3-6 alkanol (e.g. —C(Me)2-CH2—OH), —(CRxRy)s—COORz (e.g. —C(Me)2-COOH or —C(Me)2-COO-Et), —(CRxRy)s—CONRwRz (e.g. —C(Me)2—CONH2, —C(Me)2-CONHMe, —C(Me)2-CON(Me)2, —C(Me)2-CONH—(CH2)2—N(Et)2), Y-heterocyclyl (e.g. pyrrolidinyl, tetrahydrofuranyl, piperidinyl, azetidinyl or —C(Me)2-CO-azetidinyl) wherein said —Y-heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) C1-6 alkyl (e.g. methyl, ethyl or isopropyl), —CORx (e.g. —COMe), —SO2—Rx (e.g. —SO2Me) or C1-6alkanol (e.g. —CH2—CH2—OH) groups.
Also disclosed is, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents thiadiazolyl substituted by one or more (e.g. 1, 2 or 3) Rh groups such as haloC1-6 alkyl (e.g. trifluoromethyl) or —Y-heterocyclyl groups (e.g. tetrahydrofuranyl or —(CH2)2-piperidinyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents thiadiazolyl substituted by one Rh group such as haloC1-6 alkyl (e.g. trifluoromethyl), —(CH2)s—NRxRy (e.g. diethylaminoethyl, —NH2, —NHCH2CH3, —NH(CH2)2—O—CH3, —NHcyclopropyl) or —Y-heterocyclyl group (e.g. tetrahydrofuranyl or —(CH2)2-piperidinyl). In a further embodiment heterocyclyl represents pyrrolidine and Y represents ethyl. In a still further embodiment —Y-heterocyclyl represents pyrrolidin-1-yl-ethyl. In a further embodiment heterocyclyl represents a pyridinyl and Y represents —NRx—(CH2)s— (e.g. —NH—).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents N-linked imidazolyl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
In one embodiment, when R1 represents hydrogen, R2 represents haloC1-6 alkyl (e.g. —CH2—CF3) and R4c represents N-linked imidazolyl substituted by a single substituent, said substituent is other than 2-methyl.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents —(CH2)q-imidazolyl (e.g. —(CH2)2-imidazolyl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridazinyl (e.g. pyridazin-3-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Re groups such as halogen (e.g. chlorine), C1-6 alkyl (e.g. methyl), —ORx (e.g. methoxy), ═O, —(CH2)s—NRxRy (e.g. —N(Me)2, —N—C(Me)2-CH2—OH, —NH—(CH2)2—OH or —NH—(CH2)2—O-Me), —Y-heterocyclyl (e.g. -azetidinyl, -piperidinyl, —NH-piperidinyl, piperazinyl, -morpholinyl, —NH-tetrahydropyranyl) wherein said —Y-heterocyclyl groups may be optionally substituted by one or more (e.g. 1, 2 or 3) C1-6 alkyl (e.g. methyl), ═O or —(CH2)s—NRxRy (e.g. —NH2 or —N(Me)2).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridazinyl (e.g. pyridazin-3-yl) substituted by one or more (e.g. 1, 2 or 3) Re groups such as halogen (e.g. chlorine), C1-6 alkyl (e.g. methyl), —ORx (e.g. methoxy), ═O, —(CH2)s—CN (e.g. CN), —(CH2)s—NRxRy (e.g. —N(Me)2, —N—C(Me)2-CH2—OH, —NH—(CH2)2—OH or —NH—(CH2)2—O-Me), —Y-heterocyclyl (e.g. -azetidinyl, -piperidinyl, —NH-piperidinyl, piperazinyl, -morpholinyl, —NH-tetrahydropyranyl) wherein said —Y-heterocyclyl groups may be optionally substituted by one or more (e.g. 1, 2 or 3) C1-6 alkyl (e.g. methyl) or —(CH2)s—NRxRy (e.g. —NH2 or —N(Me)2).
In one embodiment, when R1 represents hydrogen and R2 represents haloC1-6 alkyl (e.g. —CH2—CF3), R4c represents pyridazinyl (e.g. pyridazin-3-yl) substituted by one or more (e.g. 1, 2 or 3) Re groups. In a further embodiment R4c represents pyridazinyl (e.g. pyridazin-3-yl) and is substituted by one C1-6alkyl (e.g. methyl) group. In a still further embodiment A is a group Ad and represents a phenyl group and R3 represents hydrogen.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrazinyl (e.g. pyrazin-2-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl), —(CH2)s—NRxRy (e.g. —NH2), —ORx (e.g. hydroxy or methoxy).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrazinyl (e.g. pyrazin-2-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. hydroxy or methoxy).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrazinyl (e.g. pyrazin-3-yl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as haloC1-6 alkyl (e.g. trifluoromethyl).
Also disclosed is, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrimidin-5-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rg groups such as —Y-heterocyclyl (e.g. -azetidinyl, -piperazinyl) wherein said —Y-heterocyclyl groups may be optionally substituted by one or more (e.g. 1, 2 or 3) halogen (e.g. fluorine), ═O or C1-6 alkyl (e.g. methyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrimidin-5-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rp groups such as haloC1-6 alkyl (e.g. trifluoromethyl), or —Y-heterocyclyl (e.g. -azetidinyl, -piperazinyl) wherein said —Y-heterocyclyl groups is substituted by one or more (e.g. 1, 2 or 3) halogen (e.g. fluorine), ═O or C1-6 alkyl (e.g. methyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as halogen (e.g. fluorine, chlorine), ═O, C1-6 alkyl (e.g. methyl, isopropyl), C1-6alkanol (e.g. —CH2OH, —CHOHCH3, —COH(CH3)2) haloC1-6 alkyl (e.g. trifluoromethyl, —CF2CH3), —ORx (e.g. methoxy, ethoxy, —OCH2CH2OH), —CORx (e.g. —COCH3), —(CRxRy)s—CONRwRz (e.g. CONH2), —(CH2)s—NRxRy (e.g. —NH2 or —N(Me)2, or —NHMe, —NH—CH2—CH2—OH, NH—CH2—CH3, —NHcyclopropyl, —NH(C4H7), —NH—CH2—CH2—NH2, —CH2N(CH3)2, —N(COOCCH3)2), —(CH2)s—CN, —(CH2)s—NRxCO2Ry (e.g. NHCO2(CH2)3CH3, —NHCO2CH2CH3, NHCO2CH2CH(CH3)2 or NHCO2(CH2)4CH3), —(CRxRy)s—COORz (e.g. —COOCH2CH3, —COOCH3 or —COOH), —(CH2)s—NRxSO2—Ry (e.g. NHSO2—CH3), —(CH2)s—NH—SO2—NRxRy (e.g. NHSO2N(CH3)2 or —Y-heterocyclyl (e.g. -piperidinyl, azetidinyl, imidazolyl, morpholine) wherein said —Y-heterocyclyl groups may be optionally substituted by one or more (e.g. 1, 2 or 3) —ORx (e.g. hydroxy) or —(CH2)s—NRxRy (e.g. —NH2) or C1-6 alkanol (e.g. —CH2CH2OH) groups. In a further embodiment Y represents a bond or —(CRxRy)s—CO— (e.g. —CO—) or —(CH2)n— (CRxRy)s (e.g. —CH2).
Also disclosed is, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrimidin-4-yl optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups or two or more (e.g. 2, 3 or 4) Rb groups such as C1-6 alkyl (e.g. methyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyrimidin-4-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rg groups or two or more (e.g. 2, 3 or 4) Rb groups such as C1-6 alkyl (e.g. methyl, isopropyl), haloC1-6 alkyl (e.g. trifluoromethyl), —ORx (e.g. methoxy), —S—Rx (e.g. —S—CH3), ═O, —(CH2)s—NRxRy (e.g.NH2, —NH(C4H7), —N(CH3)2)—(CH2)sNHC1-6alkyl (e.g. —NH—CH3), —(CH2)sN(C1-6alkyl)2 (e.g. —N(CH3)2), —(CH2)n—O—C1-6 alkyl (e.g. —CH2—O—CH3) or —Y-heterocyclyl (e.g. azetidinyl, piperazinyl, imidazoyl) wherein said —Y-heterocyclyl groups may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra group such as C1-6alkanol (e.g.CH2—CH2—OH), —(CH2)s—NRxCO2Ry (e.g. NHCO2C(CH3)3), —(CH2)s—SO2NRxRy (e.g. SO2N(CH3)2) groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents thiophenyl substituted by one or more (e.g. 1, 2 or 3) Re groups such as —(CH2)s—CONRxRy (e.g. —CONH2).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl), C1-6 alkanol (e.g. —CH2—OH or —(CH2)2—OH), haloC1-6alkyl (e.g. trifluoromethyl), halogen (e.g. fluorine), —ORx (e.g. hydroxy, methoxy or ethoxy), —(CH2)s—CONRxRy (e.g. —CONH2 or —CONHCH3) or —(CH2)s—NRxRy (e.g. —NH2) or a —Y-heterocyclyl group (e.g. morpholine) wherein said heterocyclyl group may be substituted by one or more (e.g. 1, 2 or 3) Ra groups. In a further embodiment Y represents a bond or —CO—(CH2)s (e.g. —CO—) group.
Also disclosed is, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups such as —Y-heterocyclyl (e.g. -piperidinyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups such as a piperidinyl.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups such as a piperidinyl group substituted by one or more (1, 2 or 3) Ra groups such as —(CH2)s—NRxCO2Ry (e.g. —CH2NH—COOC(CH3)3) or —(CH2)s—NRxRy (e.g. —CH2—NH2 or —NH2) or —(CH2)s—NH—SO2—NRxRy (e.g. —NH—SO2—N(CH3)2.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents pyridin-4-yl substituted by one or more (e.g. 1, 2 or 3) Rk groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents a bicyclic heterocyclic group (e.g. dihydro-cyclopentathiazolyl, thiadiazolopyrimidinyl or tetrahydrothiazolopyridinyl) containing a thiazolyl or thiadiazolyl ring optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl), ═O or —(CRxRy)s—COORz (e.g. —COO-t-butyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents a bicyclic heterocyclic group (e.g. dihydro-cyclopentathiazolyl, thiadiazolopyrimidinyl or tetrahydrothiazolopyridinyl) containing a thiazolyl or thiadiazolyl ring optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or ═O.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents a bicyclic heterocyclic group containing a thiazolyl or thiadiazolyl ring optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or ═O. In a further embodiment R4c represents imidazothiadiazolyl or benzothiazolyl substituted by a methyl group.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents triazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents oxo-dihydro-pyridin-3-yl (e.g. 6-oxo-1,6-dihydro-pyridin-3-yl) substituted by one or more (e.g. 1, 2 or 3) Rj groups.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents an N-unsubstituted pyridin-3-yl substituted on one of the carbon atoms with a substituent from the group Rb and on another carbon atom with a substituent from the group Ra such as C1-6alkyl (e.g. methyl), —(CH2)s—NRxRy (e.g. NHCH3) or —ORx (e.g. methoxy).
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents phenyl substituted by one or more (e.g. 1, 2 or 3) C2-6 alkanol groups (e.g. —(CH2)2—OH, —COH(CH3)2).
In one embodiment, R4 is a group R4c which is selected from any one of (a)-(h), (j)-(k), (m)-(r), (u), (w), (x) and (y).
In one embodiment, R4 is a group R4c which is selected from any one of (b)-(d), (f), (h), (j)-(k), (m)-(r), (u), (w), (x) and (y).
In one embodiment, R4 is a group R4c which is selected from any one of (b), (c), (f), (h), (n)-(r), (u), (w), (x) and (y).
In one embodiment, R4 is a group R4c which is selected from any one of (b), (c), (h), (n), (o), (p), (q), (r), (u), (w), (x) and (y).
In one embodiment, R4 is a group R4c which is selected from any one of (b), (h), (n), (o), (p), (q), (u), and (w).
In one embodiment, R4 is a group R4c which is selected from any one of (b), (h), (o), (p), (q), (u), and (w).
In one embodiment, R4c is (b).
In one embodiment, R4c is (n).
In one embodiment, R4c is unsubstituted pyrimidin-2-yl.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups (e.g. unsubstituted phenyl), R3 represents C1-6 alkyl and R4d represents methyl. In a further embodiment, R3 and R4d both represent methyl.
In one embodiment, when R1 represents hydrogen and R2 represents C1-6 alkyl or haloC1-6 alkyl (e.g. ethyl or —CH2—CF3), R4c represents a —X—R6 group. In a further embodiment X represents —CH═CH— and R6 represents a C1-6alkanol (e.g. —CH(OH) or an aromatic heterocycylic group, such as a pyridinyl or imidazolyl, wherein said heterocylic group is optionally substituted by one or more (1, 2 or 3) Rb groups such as C1-6alkyl (e.g. methyl, isopropyl) or C1-6alkanol (e.g. —CH(OH, —CH2CH2OH).
In one embodiment, R5 represents —(CH2)s—NRxRy, C1-6 alkanol, C3-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups.
In one embodiment, R6 represents —(CH2)s—NRxRy, C1-6 alkanol, O4-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups.
Also disclosed is when X represents a —C≡C— group, R6 represents —(CH2)s—NRxRy (e.g. —CH2—N(Me)2), C1-6 alkanol (e.g. —CH2—OH, —(CH2)2—OH or —CH(OH)-Me), C3-8 cycloalkyl (e.g. cyclopropyl) or an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, oxadiazolyl, triazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. —OH).
When X represents a —C≡C— group, in one embodiment, R6 represents —(CH2)s—NRxRy (e.g. —CH2—N(Me)2), C1-6 alkanol (e.g. —CH2—OH, —(CH2)2—OH or —CH(OH)-Me), C4-8 cycloalkyl, or an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, oxadiazolyl, triazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. —OH).
Also disclosed is when X represents a —C≡C— group, R6 represents —(CH2)s—NRxRy (e.g. —CH2—N(Me)2), C1-6 alkanol (e.g. —CH2—OH, —(CH2)2—OH or —CH(OH)-Me), C3-8 cycloalkyl (e.g. cyclopropyl) or an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. —OH). In a further embodiment, when X represents a —C≡C— group, R6 represents an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. —OH). In a further embodiment, when X represents a —C≡C— group, R6 represents an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
When X represents a —C≡C— group, in a further embodiment, R6 represents —(CH2)s—NRxRy (e.g. —CH2—N(Me)2), C1-6 alkanol (e.g. —CH2—OH, —(CH2)2—OH or —CH(OH)-Me), C4-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. —OH). In a further embodiment, when X represents a —C≡C— group, R6 represents an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl) or —ORx (e.g. —OH). In a further embodiment, when X represents a —C≡C— group, R6 represents an aromatic or non-aromatic heterocyclic group (e.g. pyridyl, imidazolyl, pyrazolyl, oxazolyl, thienyl or piperidinyl) wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
In a yet further embodiment, when X represents a —C≡C— group, R6 represents an aromatic heterocyclic group (e.g. imidazolyl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
When X represents a —CH═CH— group, in one embodiment, R6 represents an aromatic heterocyclic group (e.g. imidazolyl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
When X represents a —(CH2)q— (e.g. —(CH2)2—) group, in one embodiment, R6 represents an aromatic heterocyclic group (e.g. imidazolyl) optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups such as C1-6 alkyl (e.g. methyl).
In one embodiment q is two.
In one embodiment, when R1 represents hydrogen and R2 represents cyclopropyl, R4a represents an amino, C1-6 alkyl, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups.
In one embodiment R5 or R6 represent imidazole optionally substituted with one or more Ra groups (e.g. methyl).
In one embodiment X represents —(CH2)q—.
In one embodiment X represents —(CH2)q— and R5 or R6 represent aromatic heterocyclic group optionally substituted with one or more Ra groups.
In one embodiment X represents —CH═CH—.
In one embodiment X represents —CH═CH— and R5 or R6 represent aromatic heterocyclic group optionally substituted with one or more Ra groups
In one embodiment X represents —C≡C—.
In one embodiment X represents —C≡C— and R5 or R6 represent aromatic heterocyclic group optionally substituted with one or more Ra groups.
In one embodiment Y represents —(CRxRy)s—CO—.
In one embodiment Y represents —NRx—(CH2)s— or —(CH2)s—NRx— wherein s is zero.
In one embodiment Ra is —(CRxRy)sCONRwRz wherein Rx and Ry are not both hydrogen.
In one embodiment Ra, Rb, Rc, Rd, Re, Rg, Rn, or Rp is C1-6 alkanol.
In one embodiment Rw, Rx, Ry and Rz independently represent hydrogen, —(CH2)n—O—C1-6alkyl, C1-6 alkyl-N(C1-6 alkyl)2, C1-6 alkyl-NH(C1-6 alkyl), or when attached to a nitrogen atom Rw, Rx, Ry and Rz may form a ring.
In one embodiment, one of Rw, Rx, Ry and Rz represents hydrogen and the other represents —(CH2)n—O—C1-6alkyl, —C1-6 alkyl-N(C1-6 alkyl)2, or —C1-6 alkyl-NH(C1-6 alkyl), or when attached to a nitrogen atom Rw, Rx, Ry and Rz may form a ring.
In one embodiment, one of Rw, Rx, Ry and Rz when attached to a nitrogen atom forms a ring.
A particular embodiment is:
(i) when R1 and R2 independently represent hydrogen or C3-8 cycloalkyl;
A is a group Aa which represents an aromatic carbocyclic group;
R3 represents hydrogen;
R4 is a group R4a which represents an halogen, —X—R5 or an aromatic or non-aromatic carbocyclic or heterocyclic group wherein said carbocyclic or heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups (e.g. methyl or fluorine, —NH2);
(ii) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ab which represents an aromatic 5 membered heterocyclic;
R3 represents hydrogen;
R4 is a group R4a which represents an halogen;
(iii) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ac which represents an aromatic 6 membered heterocyclic group;
R3 represents hydrogen;
R4 is a group Rb which represents an halogen, —X—R5 or an aromatic heterocyclic group wherein when said heterocyclic group is other than pyrazolyl, oxadiazolyl or tetrazolyl said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups or when said heterocyclic group is pyrazolyl, oxadiazolyl or tetrazolyl said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rd groups or two or more (e.g. 2, 3 or 4) Rb groups;
(iv) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen;
R4 is a group R4c which is selected from any one of (a)-(h), (j)-(k), (m)-(u) and (w)-(y) which represent:
(a) an amino;
(b) —X—R6;
(c) phenyl substituted by one or more (e.g. 1, 2 or 3) C2-6 alkanol groups;
(d) pyridazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Re groups, or two or more (e.g. 2, 3 or 4) Rb groups;
(e) N-linked imidazolyl optionally substituted on the nitrogen atom or the C-2 or C1-5 atoms by one or more (e.g. 1, 2 or 3) Rb groups or at the C1-4 atom by one Re group;
(f) C-linked imidazolyl optionally substituted by one or two Rm groups on either or both of the nitrogen atoms or optionally substituted by one or two Re groups on one or two carbon atoms;
(g) pyrazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(h) thiophenyl substituted by one or more (e.g. 1, 2 or 3) Re groups;
(j) a bicyclic heterocyclic group containing a thiazolyl or thiadiazolyl ring optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(k) triazinyl optionally substituted by one or two Rb groups;
(m) pyrazolyl substituted by one or more (e.g. 1, 2 or 3) Rf groups;
(n) pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(o) pyrimidin-4-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rg groups or two or more (e.g. 2, 3 or 4) Rb groups;
(p) pyrimidin-5-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rp groups or two or more (e.g. 2, 3 or 4) Rb groups;
(q) thiadiazolyl substituted by one Rh group;
(r) pyridin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(s) pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups;
(t) pyridin-4-yl substituted by one or more (e.g. 1, 2 or 3) Rk groups or two or more (e.g. 2, 3 or 4) Rb groups;
(u) pyridin-3-yl substituted at the 2-position by —O—C1-6 alkyl and optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(w) oxo-dihydro-pyridin-3-yl substituted by one or more (e.g. 1, 2 or 3) Rj groups;
(x) N-methylpyrazolyl optionally substituted by one or more (e.g. 1, 2 or 3) Rq groups;
(y) N-unsubstituted pyridin-3-yl substituted on one of the carbon atoms with a substituent from the group Rb and substituted on another carbon atom with a substituent from the group Ra;
(v) when R1 represents hydrogen and R2 represents C1-6 alkyl or halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents C1-6 alkyl;
R4 is a group R4d which represents C1-6 alkyl; or
(vi) when R1 represents hydrogen and R2 represents halo C1-6 alkyl and A is Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4e which represents unsubstituted pyridin-3-yl, unsubstituted pyridin-4-yl or 3-pyridinyl substituted with unsubstituted piperidine;
X represents —(CH2)q—, —CH═CH— or —C≡C—;
R5 represents —(CH2)s—NRxRy, C1-6 alkyl, C1-6 alkanol, C3-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
R6 represents —(CH2)s—NRxRy, C2-6 alkyl, C1-6 alkanol, C4-8 cycloalkyl or an aromatic or non-aromatic heterocyclic group wherein said heterocyclic group may be optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
Rw, Rx, Ry and Rz independently represent hydrogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C1-6 alkanol, —COOC1-6 alkyl, hydroxy, C1-6 alkoxy, haloC1-6 alkyl, —(CH2)n—O—C1-6 alkyl, —CO—(CH2)n—C1-6 alkoxy, C1-6 alkylamino, —C1-6 alkyl-N(C1-6 alkyl)2, —C1-6 alkyl-NH(C1-6 alkyl), C3-8 cycloalkyl or C3-8 cycloalkenyl or when attached to a nitrogen atom, Rw, Rx, Ry and Rz may form a ring;
Ra represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rb represents an Ra group or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Y represents a bond, —CO—(CH2)s—, —(CRxRy)s—CO—, —COO—, —(CH2)n—(CRxRy)s—, —NRx—(CH2)s—, —(CH2)s—NRx—, —CONRx—, —NRxCO—, —SO2NRx—, —NRxSO2—, —NRxCONRy—, —NRxCSNRy—, —O—(CH2)s—, —(CH2)s—O—, —S—, —SO— or —(CH2)s—SO2—;
Rc represents chlorine, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s, —SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rd represents halogen, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Re represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2), —SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rf represents halogen, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C3-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s, —CONRxRy, —CH2—NRxRy, —(CH2)3-4—NRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)n—SO2NRxRy or —(CH2)s—SO2NHRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rg represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rh represents halogen, C3-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, O4-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)2-4—O—C1-6 alkyl, —(CH2)n—O—C2-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C2-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s, —CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rj represents chlorine, ethyl, C4-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —O—C2 alkyl, —O—C4-6 alkyl, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COOC1-6 alkyl, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—NMe(C2-6 alkyl), —(CH2)s—N—(C2-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz, —(CH2)s—SO2NRxRy, piperazine substituted by Rn, or a piperidinyl or a —O-piperidinyl group wherein said piperidinyl groups are substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rk represents chlorine, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, C2-6 alkoxy, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-2 alkanol, C4-6 alkanol, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s, —NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2), —NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups;
Rm represents halogen, C3-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rn represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups; Rp represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(OH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups; a —Y-(4-membered heterocyclyl group) wherein said 4-membered heterocyclyl group is substituted by one or more (e.g. 1, 2 or 3) Ra groups; or a —Y-(5-10 membered heterocyclyl group) wherein said 5-10 membered heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rq represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC2-6 alkyl, monohalomethyl, dihalomethyl, haloC1-6 alkoxy, C2-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —NH(C1-6alkyl), —N(C1-6alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)n—NRxRy, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
n and q independently represent an integer from 1-4;
s and t independently represent an integer from 0-4;
or a pharmaceutically acceptable salt, solvate or derivative thereof.
It is to be understood that within the ambit of the present invention is also comprised, the above particular embodiment wherein one or, whenever possible, more of the above-indicated embodiments are incorporated.
In one embodiment the compound of formula (I) is a compound of formula (Ia)




wherein R3 and R4 are as defined above for compounds of formula (I).

In one embodiment the compound of formula I is not 1-[5-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-thiazol-2-yl]-3-ethyl-urea hydrochloride.
In one embodiment the compound of formula I is not




In one embodiment the compound of formula I is not




In one embodiment the compound of formula I is not




It will be appreciated that specific embodiments of variables in formula (Ia) above are as outlined hereinbefore for formula (I).
In one embodiment the compound of formula (I) is a compound of formula (Ia) as defined hereinbefore.
In one embodiment, the compound of formula (I) is a compound selected from Examples 1-248 or 250-253, 255-337. In one embodiment, the compound of formula (I) is a compound selected from Examples 1-125, 126A-159A, 126B, 130B-133B, 135B-142B, 144B-146B, 148B-150B, 152B, 154B, 155B, 157B-159B and 160-164, 165A, 165B, 166-248 and 250-253, 255-337. In one embodiment, the compound of formula (I) is a compound selected from Examples 1-125 and 126A-159A. In a further embodiment, the compound of formula (I) is a compound selected from Examples 1-125. In a further embodiment, the compound of formula (I) is a compound selected from Examples 1-116 and 118-125. In a further embodiment, the compound of formula (I) is a compound selected from Examples 1-24, 26-76, 78-83, 85-114, 118 and 120-125. In a further embodiment, the compound of formula (I) is a compound selected from Examples 1-24, 26-38, 40-53, 56, 58-70, 72-76, 78-83, 85-87, 89-102, 114 and 116. In a further embodiment, the compound of formula (I) is a compound selected from Examples 1-19, 21-24, 26-38, 40-53, 56, 58-64, 66-70, 72-76, 78-83, 85-87, 89-94, 96-102 and 114.
Methods for the Preparation of Compounds of Formula (I)
In this section, as in all other sections of this application unless the context indicates otherwise, references to formula (I) also include formulae (Ia), and all other sub-groups and examples thereof as defined herein. References to a group Ar or CYC in the Schemes below relate to optionally substituted groups A and/or R4 as defined in Formula I, as appropriate.
Compounds of the formula (I) can be prepared in accordance with synthetic methods well known to the skilled person. In particular, compounds of formula (I) are readily prepared by palladium mediated coupling chemistries between aromatic chloro, bromo, iodo, or pseudo-halogens such as a trifluoromethanesulphonate (triflate) or tosylate compounds, and aromatic boronic acids or stannane derivatives. In particular, Suzuki coupling chemistry is broadly applicable to synthesis of these compounds. The Suzuki reaction can be carried out under typical conditions in the presence of a palladium catalyst such as bis(tri-t-butylphosphine)palladium, tetrakis(triphenyl-phosphine)-palladium or a palladacycle catalyst (e.g. the palladacycle catalyst described in Bedford, R. B. and Cazin, C. S. J. (2001) Chem. Commun., 1540-1541 and a base (e.g. a carbonate such as potassium carbonate) as discussed in more detail below. The reaction may be carried out in polar solvent for example an aqueous solvent system, including aqueous ethanol, or an ether such as dimethoxyethane or dioxane, and the reaction mixture is typically subjected to heating, for example to a temperature of 80° C. or more, e.g. a temperature in excess of 100° C.
As illustrated in Scheme 1, the imidazo[1,2-a]pyridine core can be synthesised from commercially available starting materials to give a 3,7 disubstituted ring.
4-Chloro-pyridin-2-ylamine or 4-bromo-pyridin-2-ylamine in an appropriate solvent and base can be cyclised under reflux with chloroacetaldehyde to give the imidazopyridine ring. The 7-chloro-imidazo[1,2-a]pyridine in an appropriate solvent can then be iodinated, for example using N-iodosuccinimide at room temperature.
Appropriate functionality can then be added at the halogenated positions, for example using a range of metal-catalysed reactions. In particular, appropriately functionalised boronic acids or their boronate esters may react with the aryl halide. This transformation, commonly known as the Suzuki reaction, has been reviewed by Rossi et al (2004) Synthesis, 15, 2419.
The Suzuki reaction is often carried out in mixtures of water and organic solvents. Examples of suitable organic solvents include toluene, tetrahydrofuran, 1,4-dioxane, 1,2-dimethoxyethane, acetonitrile, N-methylpyrrolidinone, ethanol, methanol and dimethylformamide. The reaction mixture is typically subjected to heating, for example to a temperature in excess of 100° C. The reaction is carried out in the presence of a base. Examples of suitable bases include sodium carbonate, potassium carbonate, cesium carbonate and potassium phosphate. Examples of suitable catalysts include bis(tri-t-butylphosphine)palladium(0), tris(dibenzylideneacetone)dipalladium(0), bis(triphenylphosphine)palladium(II) chloride, palladium(II) acetate, tetrakis(triphenylphosphine)palladium(0), bis(tricyclohexylphosphine) palladium(0), [1,1-bis(diphenylphosphino)ferrocene]-dichloropalladium(II), dichlorobis(tri-o-tolylphosphine)palladium(II), 2′-(dimethylamino)-2-biphenylyl-palladium(II) chloride dinorbornylphosphine complex and 2-(dimethylamino)ferrocen-1-yl-palladium(II) chloride dinorbornylphosphine complex. In some cases additional ligands may be added to facilitate the coupling reaction. Examples of suitable ligands include tri-t-butylphosphine, 2,2-bis(diphenylphosphino)-1,1-binaphthyl, triphenylphosphine, 1,2-bis(diphenylphosphino)ethane, 1,1′-bis(diphenylphosphino)ferrocene, tricyclohexylphosphine, 9,9-dimethyl-4,5-bis(diphenylphosphino)xanthene, 1,3-bis(diphenylphosphino)propane, 2-(di-t-butylphosphino)biphenyl, 2-dicyclohexylphosphino-2′-(n,n-dimethylamino)biphenyl, tri-o-tolylphosphine, 2-(dicyclohexylphosphino)biphenyl, 2-dicyclohexylphosphino-2′,4′,6′-triisopropylbiphenyl, tri(2-furyl)phosphine, 2-dicyclohexylphosphino-2′,6′-dimethoxybiphenyl and 2-di-tert-butylphosphino-2′,4′,6′-triisopropylbiphenyl.




Other examples of possible metal catalysed functionalisations of the halide are reactions with organo-tin reagents (the Stille reaction), with Grignard reagents and reaction with nitrogen nucleophiles. A general overview, and further leading references, of these transformations is presented in ‘Palladium Reagents and Catalysts’ [Jiro Tsuji, Wiley, ISBN 0-470-85032-9] and Handbook of OrganoPalladium Chemistry for Organic Synthesis [Volume 1, Edited by E1-ichi Negishi, Wiley, ISBN 0-471-31506-0].
A further reaction which can be utilised is the Buchwald-Hartwig type reaction (see Review: Hartwig, J. F. (1998) Angew. Chem. Int. Ed. 37, 2046-2067) which provides a means for palladium-catalyzed synthesis of aryl amines. The starting materials are aryl halides or pseudohalides (for example triflates) and primary or secondary amines, in the presence of a strong base such as sodium tert-butoxide and a palladium catalyst such as tris-(dibenzylideneacetone)-di-palladium (Pd2(dba)3), or 2,2′-bis(diphenylphosphino)-1′1-binaphthyl (BINAP).
The sequence of reactions outlined in Schemel can be alternated as outlined. Alternatively the halogen functionality at the 7-position of the imidazo[1,2-a]pyridine can be converted to a boronic acid or ester and used to synthesise alternative motifs as outlined in Scheme 2. This can then be used directly in any of the metal catalysed reactions outlined herein. For example, for conversion of a halide to a boronate, the halide is reacted with a palladium catalyst and a phosphine ligand in an appropriate solvent e.g. dioxane and base e.g. KOAc, and the appropriate substituted boron compound.




The Sonogashira reaction is a well-known reaction which provides access to internal aryl alkynyl compounds via reaction of an aryl halide (or pseudo halide) and alkyne (see review article: Chinchilla, R., Nájera, C.; (2007) Chem. Rev., 107, 8740). Typical reaction conditions involve a palladium catalyst, a copper (I) cocatalyst and base. Recently, methods have been developed which avoid the use of copper and amine (base) (Liang, Y.; Xie, Y.-X.; Li, J.-H.; (2006) J. Org. Chem., 71, 379).
The Sonogashira reaction efficiently provides access to alkynes. The appropriate chloroimidazopyridine is reacted with the appropriate alkyne e.g. ethynyl compound in the presence of a palladium catalyst and base, in solvent and heating to provide access to aryl-alkynyl or alkyl-alkynyl compounds.




Compounds were prepared via a copper-free method utilising PdCl2(PCy3)2 as catalyst, CsCO3 as base and DMSO as solvent (Chenyi, Y. and Hua, R., (2006) J. Org. Chem., 71, 2535).
The alkyne coupling partner for use in the Sonagashira reaction can be prepared from the appropriate iodo-substituted heterocycle and ethynyl-trimethyl-silane by reacting the two together with copper iodide and palladium catalyst in an inert atmosphere in the presence of base (such as triethylamine). The trimethyl silyl group on alkyne coupling partner is then removed for use in the Sonagashira reaction by stirring in methanol at room temperature in the presence of base such as potassium carbonate.
Furthermore, the internal alkyne functionality can also be reduced to form an alkene or an alkane, and thus alkynes of formula XXI could be hydrogenated to compounds of general formula imidazopyridine-CH2CH2R using Pd and H2.
Alkenes can also be prepared by selective partial reduction of the respective alkyne precursor using selective hydrogenation using poisoned palladium or can be prepared using Wittig type chemistry from formyl-imidazopyridine compound and the phosphorous ylide.
Once synthesised, a range of functional group conversions can be employed on di-aryl or alkynynl substituted imidazopyridine compounds to produce further compounds of formula (I) and in particular compounds of formula (II). For example, some of the following reactions can be used hydrogenation e.g. using Raney nickel catalyst, hydrolysis, deprotection, and oxidation.
In particular for synthesis compounds of formula (I), the imidazopyridine halide can be reacted with 3-aminobenzeneboronic acid using an appropriate metal catalyst e.g. bis(triphenylphosphine)palladium(II) chloride, to form the amino precursor for urea bond formations. As outlined Scheme 3, the amine functionality introduced can be used to synthesise ureas.




Ureas can be prepared using standard methods. For example, such compounds can be prepared by reacting an amino compound with a suitably substituted isocyanate in a polar solvent such as DMF. The reaction is conveniently carried out at room temperature.
Alternatively, ureas of the formula (I) can be prepared by reacting an amine with an appropriately substituted amine in the presence of carbonyl diimidazole (CDI). The reaction is typically carried out in a polar solvent such as THF with heating (for example using a microwave heater) to a temperature of up to about 150° C. Instead of using CDI, the coupling of the two amines to form the urea can be effected using triphosgene (bis(trichloromethyl) carbonate) in the presence of a non-interfering base such as triethylamine, in a solvent such as dichloromethane at room temperature or below. As a further alternative to CDI, phosgene may be used instead of triphosgene.
A further method for synthesising the urea functionality is by reacting the amine compound with p-nitrophenol chloroformate under conditions well known to the skilled person. The resulting carbamate compound is then reacted with the appropriate amine for example trifluoroethylamine or cyclopropylamine.
In addition the urea compounds can be synthesised by use of the appropriate substituted boronic acid in the Suzuki reaction e.g. 1-methyl-3-[3-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-urea or 3-methoxy-5-nitro-phenyl boronic acid pinacol ester. These can be synthesised as described herein.
Ureas can also be synthesised from the amine intermediate using a range of well known functional group interconversions as described in Advanced Organic Chemistry by Jerry March, 4th Edition, John Wiley & Sons, 1992.
Appropriate starting material and reagents for these reactions can be obtained commercially or by any of a large number of standard synthetic methods well known those skilled in the art, for example see Advanced Organic Chemistry by Jerry March, 4th Edition, John Wiley & Sons, 1992, and Organic Syntheses, Volumes 1-8, John Wiley, edited by Jeremiah P. Freeman (ISBN: 0-471-31192-8), 1995, and see also the methods described in the experimental section below. For example, a range of appropriate functionalized aniline and amino pyridine starting materials, and metal catalysts are commercially available.
In particular, heterocyclic halide or pseudo-halide precursors are commercially available or can be prepared from an appropriately functionalised heterocyclic compound. Alternatively the rings can be formed on the imidazopyridine scaffold using intramolecular or radical cyclisation reactions under standard conditions.
Many boronates, for example boronic acids or esters or trifluoroborates, suitable for use in preparing compounds of the invention are commercially available, for example from Boron Molecular Limited of Noble Park, Australia, or from Combi-Blocks Inc. of San Diego, USA. Where the appropriately substituted boronate is not commercially available, they can be prepared by methods known in the art, for example as described in the review article by Miyaura, N. and Suzuki, A. (1995) Chem. Rev., 95, 2457. Thus, boronates can be prepared by reacting the corresponding bromo-compound with an alkyl lithium such as butyl lithium and then reacting with a borate ester e.g. (iPrO)3B. The reaction is typically carried out in a dry polar solvent such as tetrahydrofuran at a reduced temperature (for example −78° C.). Boronate esters (for example a pinacolatoboronate) can also be prepared from a bromo-compound by reaction with a diboronate ester such as bis(pinacolato)diboron in the presence of a phosphine such as tricyclohexyl-phosphine and a palladium (0) reagent such as tris(dibenzylideneacetone)-dipalladium (0). The formation of the boronate ester is typically carried out in a dry polar aprotic solvent such as dioxane or DMSO with heating to a temperature of up to about 100° C., for example around 80° C. The resulting boronate ester derivative can, if desired, be hydrolysed to give the corresponding boronic acid or converted into the trifluoroborate.
In many of the reactions described above, it may be necessary to protect one or more groups to prevent reaction from taking place at an undesirable location on the molecule. Examples of protecting groups, and methods of protecting and deprotecting functional groups, can be found in Protective Groups in Organic Synthesis (T. Green and P. Wuts; 3rd Edition; John Wiley and Sons, 1999).
A hydroxy group may be protected, for example, as an ether (—OR) or an ester (—OC(═O)R), for example, as: a t-butyl ether; a benzyl, benzhydryl (diphenylmethyl), or trityl (triphenylmethyl)ether; a trimethylsilyl or t-butyldimethylsilyl ether; or an acetyl ester (—OC(═O)CH3, —OAc). An aldehyde or ketone group may be protected, for example, as an acetal (R—CH(OR)2) or ketal (R2C(OR)2), respectively, in which the carbonyl group (>C═O) is converted to a diether (>C(OR)2), by reaction with, for example, a primary alcohol. The aldehyde or ketone group is readily regenerated by hydrolysis using a large excess of water in the presence of acid. An amine group may be protected, for example, as an amide (—NRCO—R) or a urethane (—NRCO—OR), for example, as: a methyl amide (—NHCO—CH3); a benzyloxy amide (—NHCO—OCH2C6H5, —NH-Cbz); as a t-butoxy amide (—NHCO—OC(CH3)3, —NH-Boc); a 2-biphenyl-2-propoxy amide (—NHCO—OC(CH3)2C6H4C6H5, —NH-Bpoc), as a 9-fluorenylmethoxy amide (—NH-Fmoc), as a 6-nitroveratryloxy amide (—NH-Nvoc), as a 2-trimethylsilylethyloxy amide (—NH-Teoc), as a 2,2,2-trichloroethyloxy amide (—NH-Troc), as an allyloxy amide (—NH-Alloc), or as a 2(-phenylsulphonyl)ethyloxy amide (—NH-Psec). Other protecting groups for amines, such as cyclic amines and heterocyclic N—H groups, include toluenesulphonyl (tosyl) and methanesulphonyl (mesyl) groups and benzyl groups such as a para-methoxybenzyl (PMB) group. A carboxylic acid group may be protected as an ester for example, as: an C1-7 alkyl ester (e.g., a methyl ester; a t-butyl ester); a C1-7 haloalkyl ester (e.g., a O1-7 trihaloalkyl ester); a triC1-7alkylsilyl-C1-7alkyl ester; or a C5-20 aryl-C1-7 alkyl ester (e.g., a benzyl ester; a nitrobenzyl ester); or as an amide, for example, as a methyl amide. A thiol group may be protected, for example, as a thioether (—SR), for example, as: a benzyl thioether; an acetamidomethyl ether (—S—CH2NHC(═O)CH3).
Key intermediates in the preparation of the compounds of formula (I) are the compounds of formula (XX). Novel chemical intermediates of the formula (XX) form a further aspect of the invention.
A further aspect of the invention is a process for the preparation of a compound of formula (I) as defined herein, which process comprises:
(i) the reaction of a compound of the formula (XX):




or a protected form thereof, wherein A, R3 and R4 are as defined hereinbefore, with an appropriately substituted isocyanate or an appropriately substituted amine in the presence of carbonyl diimidazole (CDI) and thereafter removing any protecting group present; or

(ii) the reaction of a compound of the formula (XX):




or a protected form thereof, wherein A, R3 and R4 are as defined hereinbefore, with p-nitrophenyl chloroformate and an appropriately substituted amine and thereafter removing any protecting group present; or

(iii) the reaction of a compound of the formula (XXX):




wherein A, R1, R2, R5 and R6 are as defined hereinbefore; or a protected form thereof, with an appropriately substituted alkyne compound and thereafter removing any protecting group present; or

(iv) reacting a compound of formula (V) and (VI):




wherein R1, R2, R3 and R4 are as defined above for compounds of formula (I);

    
    
        and optionally thereafter converting one compound of the formula (I) into another compound of the formula (I).
    
    


In one embodiment, R1 represents hydrogen and R2 represents ethyl or CH2CF3. In an alternative embodiment, R1 represents hydrogen and R2 represents cyclopropyl. In an alternative embodiment, R1 and R2 both represent hydrogen.
According to a further aspect of the invention there is provided a novel intermediate as described herein.
In one embodiment, the novel intermediate is selected from:
N-[5-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-thiazol-2-yl]-acetamide
1-[3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-cyclopropyl-urea
Haloaromatic coupling partners e.g. X1-X35, X1-X14, and,
Boronic acid/ester coupling partners e.g. Y1
Pharmaceutically Acceptable Salts, Solvates or Derivatives Thereof.
In this section, as in all other sections of this application, unless the context indicates otherwise, references to formula (I) include references to all other sub-groups, preferences and examples thereof as defined herein. In one embodiment, references to compounds of the formula (I) includes compounds of the formula (I), or a pharmaceutically acceptable salt or solvate thereof.
Unless otherwise specified, a reference to a particular compound also includes ionic forms, salts, solvates, isomers, tautomers, N-oxides, esters, prodrugs, isotopes and protected forms thereof, for example, as discussed below; preferably, the ionic forms, or salts or tautomers or isomers or N-oxides or solvates thereof; and more preferably, the ionic forms, or salts or tautomers or solvates or protected forms thereof. Many compounds of the formula (I) can exist in the form of salts, for example acid addition salts or, in certain cases salts of organic and inorganic bases such as carboxylate, sulphonate and phosphate salts. All such salts are within the scope of this invention, and references to compounds of the formula (I) include the salt forms of the compounds.
The salts of the present invention can be synthesized from the parent compound that contains a basic or acidic moiety by conventional chemical methods such as methods described in Pharmaceutical Salts: Properties, Selection, and Use, P. Heinrich Stahl (Editor), Camille G. Wermuth (Editor), ISBN: 3-90639-026-8, Hardcover, 388 pages, August 2002. Generally, such salts can be prepared by reacting the free acid or base forms of these compounds with the appropriate base or acid in water or in an organic solvent, or in a mixture of the two; generally, nonaqueous media such as ether, ethyl acetate, ethanol, isopropanol, or acetonitrile are used.
Acid addition salts may be formed with a wide variety of acids, both inorganic and organic. Examples of acid addition salts include salts formed with an acid selected from the group consisting of acetic, 2,2-dichloroacetic, adipic, alginic, ascorbic (e.g. L-ascorbic), L-aspartic, benzenesulphonic, benzoic, 4-acetamidobenzoic, butanoic, (+) camphoric, camphor-sulphonic, (+)-(1S)-camphor-10-sulphonic, capric, caproic, caprylic, cinnamic, citric, cyclamic, dodecylsulphuric, ethane-1,2-disulphonic, ethanesulphonic, 2-hydroxyethanesulphonic, formic, fumaric, galactaric, gentisic, glucoheptonic, D-gluconic, glucuronic (e.g. D-glucuronic), glutamic (e.g. L-glutamic), α-oxoglutaric, glycolic, hippuric, hydrobromic, hydrochloric, hydriodic, isethionic, lactic (e.g. (+)-L-lactic, (±)-DL-lactic), lactobionic, maleic, malic, (−)-L-malic, malonic, (±)-DL-mandelic, methanesulphonic, naphthalenesulphonic (e.g. naphthalene-2-sulphonic), naphthalene-1,5-disulphonic, 1-hydroxy-2-naphthoic, nicotinic, nitric, oleic, orotic, oxalic, palmitic, pamoic, phosphoric, propionic, L-pyroglutamic, salicylic, 4-amino-salicylic, sebacic, stearic, succinic, sulphuric, tannic, (+)-L-tartaric, thiocyanic, toluenesulphonic (e.g. p-toluenesulphonic), undecylenic and valeric acids, as well as acylated amino acids and cation exchange resins.
One particular group of salts consists of salts formed from acetic, hydrochloric, hydriodic, phosphoric, nitric, sulphuric, citric, lactic, succinic, maleic, malic, isethionic, fumaric, benzenesulphonic, toluenesulphonic, methanesulphonic (mesylate), ethanesulphonic, naphthalenesulphonic, valeric, acetic, propanoic, butanoic, malonic, glucuronic and lactobionic acids.
Another group of acid addition salts includes salts formed from acetic, adipic, ascorbic, aspartic, citric, DL-Lactic, fumaric, gluconic, glucuronic, hippuric, hydrochloric, glutamic, DL-malic, methanesulphonic, sebacic, stearic, succinic and tartaric acids.
The compounds of the invention may exist as mono- or di-salts depending upon the pKa of the acid from which the salt is formed.
If the compound is anionic, or has a functional group which may be anionic (e.g., —COOH may be —COO−), then a salt may be formed with a suitable cation. Examples of suitable inorganic cations include, but are not limited to, alkali metal ions such as Na+ and K+, alkaline earth metal cations such as Ca2+ and Mg2+, and other cations such as Al3+. Examples of suitable organic cations include, but are not limited to, ammonium ion (i.e., NH4+) and substituted ammonium ions (e.g., NH3R+, NH2R2+, NHR3+, NR4+).
Examples of some suitable substituted ammonium ions are those derived from: ethylamine, diethylamine, dicyclohexylamine, triethylamine, butylamine, ethylenediamine, ethanolamine, diethanolamine, piperazine, benzylamine, phenylbenzylamine, choline, meglumine, and tromethamine, as well as amino acids, such as lysine and arginine. An example of a common quaternary ammonium ion is N(CH3)4+.
Where the compounds of the formula (I) contain an amine function, these may form quaternary ammonium salts, for example by reaction with an alkylating agent according to methods well known to the skilled person. Such quaternary ammonium compounds are within the scope of formula (I).
The salt forms of the compounds of the invention are typically pharmaceutically acceptable salts, and examples of pharmaceutically acceptable salts are discussed in Berge et al. (1977) “Pharmaceutically Acceptable Salts,” J. Pharm. Sci., Vol. 66, pp. 1-19. However, salts that are not pharmaceutically acceptable may also be prepared as intermediate forms which may then be converted into pharmaceutically acceptable salts. Such non-pharmaceutically acceptable salts forms, which may be useful, for example, in the purification or separation of the compounds of the invention, also form part of the invention.
Compounds of the formula (I) containing an amine function may also form N-oxides. A reference herein to a compound of the formula (I) that contains an amine function also includes the N-oxide.
Where a compound contains several amine functions, one or more than one nitrogen atom may be oxidised to form an N-oxide. Particular examples of N-oxides are the N-oxides of a tertiary amine or a nitrogen atom of a nitrogen-containing heterocycle.
N-Oxides can be formed by treatment of the corresponding amine with an oxidizing agent such as hydrogen peroxide or a per-acid (e.g. a peroxycarboxylic acid), see for example Advanced Organic Chemistry, by Jerry March, 4th Edition, Wiley Interscience, pages. More particularly, N-oxides can be made by the procedure of L. W. Deady (Syn. Comm. (1977), 7, 509-514) in which the amine compound is reacted with m-chloroperoxybenzoic acid (MCPBA), for example, in an inert solvent such as dichloromethane. Particular examples of N-oxides include morpholine N-oxides and pyridine N-oxides.
Also encompassed by formula (I) are any polymorphic forms of the compounds, and solvates such as hydrates.
The compound of the invention and its salts and tautomers may form solvates, for example with water (i.e., hydrates) or common organic solvents. As used herein, the term “solvate” means a physical association of the compounds of the present invention with one or more solvent molecules. This physical association involves varying degrees of ionic and covalent bonding, including hydrogen bonding. In certain instances the solvate will be capable of isolation, for example when one or more solvent molecules are incorporated in the crystal lattice of the crystalline solid. The term “solvate” is intended to encompass both solution-phase and isolatable solvates. Non-limiting examples of suitable solvates include compounds of the invention in combination with water, isopropanol, ethanol, methanol, DMSO, ethyl acetate, acetic acid or ethanolamine and the like. The compounds of the invention may exert their biological effects whilst they are in solution.
Solvates are well known in pharmaceutical chemistry. They can be important to the processes for the preparation of a substance (e.g. in relation to their purification, the storage of the substance (e.g. its stability) and the ease of handling of the substance and are often formed as part of the isolation or purification stages of a chemical synthesis. A person skilled in the art can determine by means of standard and long used techniques whether a hydrate or other solvate has formed by the isolation conditions or purification conditions used to prepare a given compound. Examples of such techniques include thermogravimetric analysis (TGA), differential scanning calorimetry (DSC), X-ray crystallography (e.g. single crystal X-ray crystallography or X-ray powder diffraction) and Solid State NMR(SS-NMR, also known as Magic Angle Spinning NMR or MAS-NMR). Such techniques are as much a part of the standard analytical toolkit of the skilled chemist as NMR, IR, HPLC and MS.
Alternatively the skilled person can deliberately form a solvate using crystallisation conditions that include an amount of the solvent required for the particular solvate. Thereafter the standard methods described above, can be used to establish whether solvates had formed.
Furthermore, the compounds of the present invention may have one or more polymorph (crystalline) forms or may be amorphous and as such are intended to be included in the scope of the invention.
Compounds of the formula (I) may exist in a number of different geometric isomeric, and tautomeric forms and references to compounds of the formula (I) include all such forms. For the avoidance of doubt, where a compound can exist in one of several geometric isomeric or tautomeric forms and only one is specifically described or shown, all others are nevertheless embraced by formula (I).
Other examples of tautomeric forms include, for example, keto-, enol-, and enolate-forms, as in, for example, the following tautomeric pairs: keto/enol (illustrated below), imine/enamine, amide/imino alcohol, amidine/amidine, nitroso/oxime, thioketone/enethiol, and nitro/aci-nitro.




Where compounds of the formula (I) contain one or more chiral centres, and can exist in the form of two or more optical isomers, references to compounds of the formula (I) include all optical isomeric forms thereof (e.g. enantiomers, epimers and diastereoisomers), either as individual optical isomers, or mixtures (e.g. racemic mixtures) or two or more optical isomers, unless the context requires otherwise.

The optical isomers may be characterised and identified by their optical activity (i.e. as + and − isomers, or d and l isomers) or they may be characterised in terms of their absolute stereochemistry using the “R and S” nomenclature developed by Cahn, Ingold and Prelog, see Advanced Organic Chemistry by Jerry March, 4th Edition, John Wiley & Sons, New York, 1992, pages 109-114, and see also Cahn, Ingold & Prelog (1966) Angew. Chem. Int. Ed. Engl., 5, 385-415.
Optical isomers can be separated by a number of techniques including chiral chromatography (chromatography on a chiral support) and such techniques are well known to the person skilled in the art.
As an alternative to chiral chromatography, optical isomers can be separated by forming diastereoisomeric salts with chiral acids such as (+)-tartaric acid, (−)-pyroglutamic acid, (−)-di-toluoyl-L-tartaric acid, (+)-mandelic acid, (−)-malic acid, and (−)-camphorsulphonic, separating the diastereoisomers by preferential crystallisation, and then dissociating the salts to give the individual enantiomer of the free base.
Where compounds of the formula (I) exist as two or more optical isomeric forms, one enantiomer in a pair of enantiomers may exhibit advantages over the other enantiomer, for example, in terms of biological activity. Thus, in certain circumstances, it may be desirable to use as a therapeutic agent only one of a pair of enantiomers, or only one of a plurality of diastereoisomers. Accordingly, the invention provides compositions containing a compound of the formula (I) having one or more chiral centres, wherein at least 55% (e.g. at least 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95%) of the compound of the formula (I) is present as a single optical isomer (e.g. enantiomer or diastereoisomer). In one general embodiment, 99% or more (e.g. substantially all) of the total amount of the compound of the formula (I) may be present as a single optical isomer (e.g. enantiomer or diastereoisomer).
Where compounds of the formula (I) contain one or more double bonds, and can exist in the form of two geometric isomers, references to compounds of the formula (I) include both stereoisomeric forms thereof (i.e. cis-trans isomerism or (E) and (Z) isomerism), either as individual isomers, or mixtures of two isomers, unless the context requires otherwise.
The term “geometric isomer” means isomers that differ in the orientation of substituent atoms in relationship to a carbon-carbon double bond, to a carbon-nitrogen double bond, to a cycloalkyl ring, or to a bridged bicyclic system. Substituent atoms (other than hydrogen) on each side of a carbon-carbon or carbon-nitrogen double bond may be in an E or Z configuration. Whether a molecular configuration is designated E or Z is determined by the Cahn-lngold-Prelog priority rules (higher atomic numbers are given higher priority). For each of the two atoms in the double bond, it is necessary to determine which of the two substituents is of a higher priority. In the “E” configuration, both of the substituents of higher priority are on opposite sides in relationship to the double bond. In the “Z” configuration, both of the substituents of higher priority are on the same side in relationship to the double bond.
The isomeric descriptors (“R,” “S,” “E,” and “Z”) indicate atom configurations and are intended to be used as defined in the literature. Where a compound is drawn or indicated as a specific isomer, the alternative isomer and mixtures of the isomers are also within the scope of the application.
Synthetic processes can result in a mixture of geometric isomers and then chirally stable isomers can be separated by a number of techniques including chromatography and such techniques well known to the person skilled in the art. Alternatively various synthetic processes can be used to influence whether the E or Z geometric isomer was produced.
In cases where the compounds of the invention exist as the E and Z isomers, the invention includes individual isomers as well as mixtures thereof. Where compounds of the formula (I) exist as two or more stereoisomeric forms, one stereoisomer in a pair may exhibit advantages over the other, for example, in terms of biological activity. Thus, in certain circumstances, it may be desirable to use as a therapeutic agent only one of a pair of stereoisomers. Accordingly, the invention provides compositions containing a compound of the formula (I) having one or more double bonds, wherein at least 55% (e.g. at least 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95%) of the compound of the formula (I) is present as a single isomer (e.g. (E) or (Z) isomer). In one general embodiment, 99% or more (e.g. substantially all) of the total amount of the compound of the formula (I) may be present as a single stereoisomer.
The compounds of the invention include compounds with one or more isotopic substitutions, and a reference to a particular element includes within its scope all isotopes of the element. For example, a reference to hydrogen includes within its scope 1H, 2H (D), and 3H(T). Similarly, references to carbon and oxygen include within their scope respectively 12C, 13C and 14C and 16C and 18O.
The isotopes may be radioactive or non-radioactive. In one embodiment of the invention, the compounds contain no radioactive isotopes. Such compounds are preferred for therapeutic use. In another embodiment, however, the compound may contain one or more radioisotopes. Compounds containing such radioisotopes may be useful in a diagnostic context.
Esters such as carboxylic acid esters and acyloxy esters of the compounds of formula (I) bearing a carboxylic acid group or a hydroxyl group are also embraced by formula (I). In one embodiment of the invention, formula (I) includes within its scope esters of compounds of the formula (I) bearing a carboxylic acid group or a hydroxyl group. In another embodiment of the invention, formula (I) does not include within its scope esters of compounds of the formula (I) bearing a carboxylic acid group or a hydroxyl group. Examples of esters are compounds containing the group —C(═O)OR, wherein R is an ester substituent, for example, a C1-7 alkyl group, a C3-20 heterocyclyl group (a heterocyclic groups as defined above but having from 3 to 20 ring members), or a C5-20 aryl group (an aryl group as defined above but having from 5 to 20 ring members), preferably a C1-7 alkyl group. Particular examples of ester groups include, but are not limited to, —C(═O)OCH3, —C(═O)OCH2CH3, —C(═O)OC(CH3)3, and —C(═O)OPh. Examples of acyloxy (reverse ester) groups are represented by —OC(═O)R, wherein R is an acyloxy substituent, for example, a C1-7 alkyl group, a C3-20 heterocyclyl group, or a C5-20 aryl group, preferably a C1-7 alkyl group. Particular examples of acyloxy groups include, but are not limited to, —OC(═O)CH3 (acetoxy), —OC(═O)CH2CH3, —OC(═O)C(CH3)3, —OC(═O)Ph, and —OC(═O)CH2Ph.
Also encompassed by formula (I) are any polymorphic forms of the compounds, solvates (e.g. hydrates), complexes (e.g. inclusion complexes or clathrates with compounds such as cyclodextrins, or complexes with metals) of the compounds, and prodrugs of the compounds. By “prodrugs” is meant for example any compound that is converted in vivo into a biologically active compound of the formula (I).
For example, some prodrugs are esters of the active compound (e.g., a physiologically acceptable metabolically labile ester). During metabolism, the ester group (—C(═O)OR) is cleaved to yield the active drug. Such esters may be formed by esterification, for example, of any of the carboxylic acid groups (—C(═O)OH) in the parent compound, with, where appropriate, prior protection of any other reactive groups present in the parent compound, followed by deprotection if required.
Examples of such metabolically labile esters include those of the formula —C(═O)OR wherein R is:

    C1-7alkyl (e.g., -Me, -Et, -nPr, -iPr, -nBu, -sBu, -iBu, -tBu);
    C1-7-aminoalkyl (e.g., aminoethyl; 2-(N,N-diethylamino)ethyl; 2-(4-morpholino)ethyl); and
    acyloxy-C1-7alkyl (e.g., acyloxymethyl; acyloxyethyl; pivaloyloxymethyl; acetoxymethyl;
    1-acetoxyethyl; 1-(1-methoxy-1-methyl)ethyl-carbonyloxyethyl; 1-(benzoyloxy)ethyl; isopropoxy-carbonyloxymethyl;
    1-isopropoxy-carbonyloxyethyl; cyclohexyl-carbonyloxymethyl; 1-cyclohexyl-carbonyloxyethyl; cyclohexyloxy-carbonyloxymethyl;
    1-cyclohexyloxy-carbonyloxyethyl; (4-tetrahydropyranyloxy) carbonyloxymethyl; 1-(4-tetrahydropyranyloxy)carbonyloxyethyl;
    (4-tetrahydropyranyl)carbonyloxymethyl; and 1-(4-tetrahydropyranyl)carbonyloxyethyl).


Also, some prodrugs are activated enzymatically to yield the active compound, or a compound which, upon further chemical reaction, yields the active compound (for example, as in antigen-directed enzyme pro-drug therapy (ADEPT), gene-directed enzyme pro-drug therapy (GDEPT) and ligand-directed enzyme pro-drug therapy (LIDEPT) etc.). For example, the prodrug may be a sugar derivative or other glycoside conjugate, or may be an amino acid ester derivative.
It will be appreciated that references to “derivatives” include references to ionic forms, salts, solvates, isomers, tautomers, N-oxides, esters, prodrugs, isotopes and protected forms thereof.
According to one aspect of the invention there is provided a compound as defined herein or a salt, tautomer, N-oxide or solvate thereof.
According to a further aspect of the invention there is provided a compound as defined herein or a salt or solvate thereof.
References to compounds of the formula (I) and (Ia) and sub-groups thereof as defined herein include within their scope the salts or solvates or tautomers or N-oxides of the compounds.
Protein Tyrosine Kinases (PTK)
The compounds of the invention described herein inhibit or modulate the activity of certain tyrosine kinases, and thus the compounds will be useful in the treatment or prophylaxis of disease states or conditions mediated by those tyrosine kinases in particular FGFR.
FGFR
The fibroblast growth factor (FGF) family of protein tyrosine kinase (PTK) receptors regulates a diverse array of physiologic functions including mitogenesis, wound healing, cell differentiation and angiogenesis, and development. Both normal and malignant cell growth as well as proliferation are affected by changes in local concentration of FGFs, extracellular signalling molecules which act as autocrine as well as paracrine factors. Autocrine FGF signalling may be particularly important in the progression of steroid hormone-dependent cancers to a hormone independent state (Powers, et al. (2000) Endocr. Relat. Cancer, 7, 165-197).
FGFs and their receptors are expressed at increased levels in several tissues and cell lines and overexpression is believed to contribute to the malignant phenotype. Furthermore, a number of oncogenes are homologues of genes encoding growth factor receptors, and there is a potential for aberrant activation of FGF-dependent signalling in human pancreatic cancer (Ozawa, et al. (2001), Teratog. Carcinog. Mutagen., 21, 27-44).
The two prototypic members are acidic fibroblast growth factor (aFGF or FGF1) and basic fibroblast growth factor (bFGF or FGF2), and to date, at least twenty distinct FGF family members have been identified. The cellular response to FGFs is transmitted via four types of high affinity transmembrane protein tyrosine-kinase fibroblast growth factor receptors (FGFR) numbered 1 to 4 (FGFR1 to FGFR4). Upon ligand binding, the receptors dimerize and auto- or trans-phosphorylate specific cytoplasmic tyrosine residues to transmit an intracellular signal that ultimately regulates nuclear transcription factor effectors.
Disruption of the FGFR1 pathway should affect tumor cell proliferation since this kinase is activated in many tumor types in addition to proliferating endothelial cells. The over-expression and activation of FGFR1 in tumor-associated vasculature has suggested a role for these molecules in tumor angiogenesis.
Fibroblast growth factor receptor 2 has high affinity for the acidic and/or basic fibroblast growth factors, as well as the keratinocyte growth factor ligands. Fibroblast growth factor receptor 2 also propagates the potent osteogenic effects of FGFs during osteoblast growth and differentiation. Mutations in fibroblast growth factor receptor 2, leading to complex functional alterations, were shown to induce abnormal ossification of cranial sutures (craniosynostosis), implying a major role of FGFR signalling in intramembranous bone formation. For example, in Apert (AP) syndrome, characterized by premature cranial suture ossification, most cases are associated with point mutations engendering gain-of-function in fibroblast growth factor receptor 2 (Lemonnier, et al. (2001), J. Bone Miner. Res., 16, 832-845). In addition, mutation screening in patients with syndromic craniosynostoses indicates that a number of recurrent FGFR2 mutations accounts for severe forms of Pfeiffer syndrome (Lajeunie et al, European Journal of Human Genetics (2006) 14, 289-298). Particular mutations of FGFR2 include W290C, D321A, Y340C, C342R, C342S, C342W, N549H, K641R in FGFR2.
Several severe abnormalities in human skeletal development, including Apert, Crouzon, Jackson-Weiss, Beare-Stevenson cutis gyrata, and Pfeiffer syndromes are associated with the occurrence of mutations in fibroblast growth factor receptor 2. Most, if not all, cases of Pfeiffer Syndrome (PS) are also caused by de novo mutation of the fibroblast growth factor receptor 2 gene (Meyers, et al. (1996) Am. J. Hum. Genet., 58, 491-498; Plomp, et al. (1998) Am. J. Med. Genet., 75, 245-251), and it was recently shown that mutations in fibroblast growth factor receptor 2 break one of the cardinal rules governing ligand specificity. Namely, two mutant splice forms of fibroblast growth factor receptor, FGFR2c and FGFR2b, have acquired the ability to bind to and be activated by atypical FGF ligands. This loss of ligand specificity leads to aberrant signalling and suggests that the severe phenotypes of these disease syndromes result from ectopic ligand-dependent activation of fibroblast growth factor receptor 2 (Yu, et al. (2000), Proc. Natl. Acad. Sci. U.S.A., 97, 14536-14541).
Genetic aberrations of the FGFR3 receptor tyrosine kinase such as chromosomal translocations or point mutations result in ectopically expressed or deregulated, constitutively active, FGFR3 receptors. Such abnormalities are linked to a subset of multiple myelomas and in bladder, hepatocellular, oral squamous cell carcinoma and cervical carcinomas (Powers, C. J. (2000), et al., Endocr. Rel. Cancer, 7, 165; Qiu, W. et. al. (2005), World Journal Gastroenterol, 11(34)). Accordingly, FGFR3 inhibitors would be useful in the treatment of multiple myeloma, bladder and cervical carcinomas. FGFR3 is also over-expressed in bladder cancer, in particular invasive bladder cancer. FGFR3 is frequently activated by mutation in urothelial carcinoma (UC) (Journal of Pathology (2007), 213(1), 91-98). Increased expression was associated with mutation (85% of mutant tumors showed high-level expression) but also 42% of tumors with no detectable mutation showed over-expression, including many muscle-invasive tumors.
As such, the compounds which inhibit FGFR will be useful in providing a means of preventing the growth or inducing apoptosis in tumours, particularly by inhibiting angiogenesis. It is therefore anticipated that the compounds will prove useful in treating or preventing proliferative disorders such as cancers. In particular tumours with activating mutants of receptor tyrosine kinases or upregulation of receptor tyrosine kinases may be particularly sensitive to the inhibitors. Patients with activating mutants of any of the isoforms of the specific RTKs discussed herein may also find treatment with RTK inhibitors particularly beneficial.
Over expression of FGFR4 has been linked to poor prognosis in both prostate and thyroid carcinomas (Ezzat, S., et al. (2002) The Journal of Clinical Investigation, 109, 1; Wang et al. (2004) Clinical Cancer Research, 10). In addition a germline polymorphism (Gly388Arg) is associated with increased incidence of lung, breast, colon and prostate cancers (Wang et al. (2004) Clinical Cancer Research, 10). In addition, a truncated form of FGFR4 (including the kinase domain) has also been found to present in 40% of pituitary tumours but not present in normal tissue. FGFR4 overexpression has been observed in liver, colon and lung tumours (Desnoyers et al. (2008) Oncogene, 27; Ho et al. (2009) Journal of Hepatology, 50). These studies described targetting of either FGFR4 kinase activity or its ligand FGF 19 with an antibody antagonist inhibited proliferation and induced apoptosis in cell line models. Ho et al showed that one third of patients with a common polymorphism in the FGFR4 gene expressed high levels of mRNA and these tumours were associated with high secreted levels of the hepatocellular carcinoma marker alpha-fetoprotein.
A recent study has shown a link between FGFR1 expression and tumorigenicity in Classic Lobular Carcinomas (CLC). CLCs account for 10-15% of all breast cancers and, in general, lack p53 and Her2 expression whilst retaining expression of the oestrogen receptor. A gene amplification of 8p12-p11.2 was demonstrated in  ̃50% of CLC cases and this was shown to be linked with an increased expression of FGFR1. Preliminary studies with siRNA directed against FGFR1, or a small molecule inhibitor of the receptor, showed cell lines harbouring this amplification to be particularly sensitive to inhibition of this signalling pathway (Reis-Filho et al. (2006) Clin Cancer Res. 12(22): 6652-6662.
Rhabdomyosarcoma (RMS), the most common pediatric soft tissue sarcoma likely results from abnormal proliferation and differentiation during skeletal myogenesis. FGFR1 is over-expressed in primary rhabdomyosarcoma tumors and is associated with hypomethylation of a 5′ CpG island and abnormal expression of the AKT1, NOG, and BMP4 genes (Genes, Chromosomes & Cancer (2007), 46(11), 1028-1038).
Fibrotic conditions are a major medical problem resulting from abnormal or excessive deposition of fibrous tissue. This occurs in many diseases, including liver cirrhosis, glomerulonephritis, pulmonary fibrosis, systemic fibrosis, rheumatoid arthritis, as well as the natural process of wound healing. The mechanisms of pathological fibrosis are not fully understood but are thought to result from the actions of various cytokines (including tumor necrosis factor (TNF), fibroblast growth factors (FGF's), platelet derived growth factor (PDGF) and transforming growth factor beta. (TGFβ) involved in the proliferation of fibroblasts and the deposition of extracellular matrix proteins (including collagen and fibronectin). This results in alteration of tissue structure and function and subsequent pathology.
A number of preclinical studies have demonstrated the up-regulation of fibroblast growth factors in preclinical models of lung fibrosis (Inoue, et al. (1997 & 2002); Barrios, et al. (1997)). TGFβ1 and PDGF have been reported to be involved in the fibrogenic process (reviewed by Atamas & White, 2003) and further published work suggests the elevation of FGF's and consequent increase in fibroblast proliferation, may be in response to elevated TGFβ1 (Khalil, et al., 2005). The potential therapeutic relevance of this pathway in fibrotic conditions is suggested by the reported clinical effect of Pirfenidone (Arata, et al., 2005) in idiopathic pulmonary fibrosis (IPF).
Idiopathic pulmonary fibrosis (also referred to as Cryptogenic fibrosing alveolitis) is a progressive condition involving scarring of the lung. Gradually, the air sacs of the lungs become replaced by fibrotic tissue, which becomes thicker, causing an irreversible loss of the tissue's ability to transfer oxygen into the bloodstream. The symptoms of the condition include shortness of breath, chronic dry coughing, fatigue, chest pain and loss of appetite resulting in rapid weight loss. The condition is extremely serious with approximately 50% mortality after 5 years.
Vascular Endothelial Growth Factor (VEGFR)
Chronic proliferative diseases are often accompanied by profound angiogenesis, which can contribute to or maintain an inflammatory and/or proliferative state, or which leads to tissue destruction through the invasive proliferation of blood vessels. (Folkman (1997), 79, 1-81; Folkman (1995), Nature Medicine, 1, 27-31; Folkman and Shing (1992) J. Biol. Chem., 267, 10931).
Angiogenesis is generally used to describe the development of new or replacement blood vessels, or neovascularisation. It is a necessary and physiological normal process by which vasculature is established in the embryo. Angiogenesis does not occur, in general, in most normal adult tissues, exceptions being sites of ovulation, menses and wound healing. Many diseases, however, are characterized by persistent and unregulated angiogenesis. For instance, in arthritis, new capillary blood vessels invade the joint and destroy cartilage (Colville-Nash and Scott (1992), Ann. Rhum. Dis., 51, 919). In diabetes (and in many different eye diseases), new vessels invade the macula or retina or other ocular structures, and may cause blindness (Brooks, et al. (1994) Cell, 79, 1157). The process of atherosclerosis has been linked to angiogenesis (Kahlon, et al. (1992) Can. J. Cardiol., 8, 60). Tumor growth and metastasis have been found to be angiogenesis-dependent (Folkman (1992), Cancer Biol, 3, 65; Denekamp, (1993) Br. J. Rad., 66,181; Fidler and Ellis (1994), Cell, 79,185).
The recognition of the involvement of angiogenesis in major diseases has been accompanied by research to identify and develop inhibitors of angiogenesis. These inhibitors are generally classified in response to discrete targets in the angiogenesis cascade, such as activation of endothelial cells by an angiogenic signal; synthesis and release of degradative enzymes; endothelial cell migration; proliferation of endothelial cells; and formation of capillary tubules. Therefore, angiogenesis occurs in many stages and attempts are underway to discover and develop compounds that work to block angiogenesis at these various stages.
There are publications that teach that inhibitors of angiogenesis, working by diverse mechanisms, are beneficial in diseases such as cancer and metastasis (O'Reilly, et al. (1994) Cell, 79, 315; lngber, et al. (1990) Nature, 348, 555), ocular diseases (Friedlander, et al. (1995) Science, 270,1500), arthritis (Peacock, et al. (1992), J. Exp. Med., 175, 1135; Peacock et al. (1995), Cell. Immun., 160,178) and hemangioma (Taraboletti, et al. (1995) J. Natl. Cancer Inst., 87, 293).
Receptor tyrosine kinases (RTKs) are important in the transmission of biochemical signals across the plasma membrane of cells. These transmembrane molecules characteristically consist of an extracellular ligand-binding domain connected through a segment in the plasma membrane to an intracellular tyrosine kinase domain. Binding of ligand to the receptor results in stimulation of the receptor-associated tyrosine kinase activity that leads to phosphorylation of tyrosine residues on both the receptor and other intracellular proteins, leading to a variety of cellular responses. To date, at least nineteen distinct RTK subfamilies, defined by amino acid sequence homology, have been identified.
Vascular endothelial growth factor (VEGF), a polypeptide, is mitogenic for endothelial cells in vitro and stimulates angiogenic responses in vivo. VEGF has also been linked to inappropriate angiogenesis (Pinedo, H. M., et al. (2000), The Oncologist, 5(90001), 1-2). VEGFR(s) are protein tyrosine kinases (PTKs). PTKs catalyze the phosphorylation of specific tyrosine residues in proteins involved in cell function thus regulating cell growth, survival and differentiation. (Wilks, A. F. (1990), Progress in Growth Factor Research, 2, 97-111; Courtneidge, S. A. (1993) Dev. Supp.l, 57-64; Cooper, J. A. (1994), Semin. Cell Biol., 5(6), 377-387; Paulson, R. F. (1995), Semin. Immunol., 7(4), 267-277; Chan, A. C. (1996), Curr. Opin. Immunol., 8(3), 394-401).
Three PTK receptors for VEGF have been identified: VEGFR-1 (Flt-1); VEGFR-2 (Flk-1 or KDR) and VEGFR-3 (Flt-4). These receptors are involved in angiogenesis and participate in signal transduction (Mustonen, T. (1995), et al., J. Cell Biol., 129, 895-898).
Of particular interest is VEGFR-2, which is a transmembrane receptor PTK expressed primarily in endothelial cells. Activation of VEGFR-2 by VEGF is a critical step in the signal transduction pathway that initiates tumour angiogenesis. VEGF expression may be constitutive to tumour cells and can also be upregulated in response to certain stimuli. One such stimuli is hypoxia, where VEGF expression is upregulated in both tumour and associated host tissues. The VEGF ligand activates VEGFR-2 by binding with its extracellular VEGF binding site. This leads to receptor dimerization of VEGFRs and autophosphorylation of tyrosine residues at the intracellular kinase domain of VEGFR-2. The kinase domain operates to transfer a phosphate from ATP to the tyrosine residues, thus providing binding sites for signalling proteins downstream of VEGFR-2 leading ultimately to initiation of angiogenesis (McMahon, G. (2000), The Oncologist, 5(90001), 3-10).
Inhibition at the kinase domain binding site of VEGFR-2 would block phosphorylation of tyrosine residues and serve to disrupt initiation of angiogenesis.
Angiogenesis is a physiologic process of new blood vessel formation mediated by various cytokines called angiogenic factors. Although its potential pathophysiologic role in solid tumors has been extensively studied for more than 3 decades, enhancement of angiogenesis in chronic lymphocytic leukemia (CLL) and other malignant hematological disorders has been recognized more recently. An increased level of angiogenesis has been documented by various experimental methods both in bone marrow and lymph nodes of patients with CLL. Although the role of angiogenesis in the pathophysiology of this disease remains to be fully elucidated, experimental data suggest that several angiogenic factors play a role in the disease progression. Biologic markers of angiogenesis were also shown to be of prognostic relevance in CLL. This indicates that VEGFR inhibitors may also be of benefit for patients with leukemia's such as CLL.
In order for a tumour mass to get beyond a critical size, it must develop an associated vasculature. It has been proposed that targeting a tumor vasculature would limit tumor expansion and could be a useful cancer therapy. Observations of tumor growth have indicated that small tumour masses can persist in a tissue without any tumour-specific vasculature. The growth arrest of nonvascularized tumors has been attributed to the effects of hypoxia at the center of the tumor. More recently, a variety of proangiogenic and antiangiogenic factors have been identified and have led to the concept of the “angiogenic switch,” a process in which disruption of the normal ratio of angiogenic stimuli and inhibitors in a tumor mass allows for autonomous vascularization. The angiogenic switch appears to be governed by the same genetic alterations that drive malignant conversion: the activation of oncogenes and the loss of tumour suppressor genes. Several growth factors act as positive regulators of angiogenesis. Foremost among these are vascular endothelial growth factor (VEGF), basic fibroblast growth factor (bFGF), and angiogenin. Proteins such as thrombospondin (Tsp-1), angiostatin, and endostatin function as negative regulators of angiogenesis.
Inhibition of VEGFR2 but not VEGFR1 markedly disrupts angiogenic switching, persistent angiogenesis, and initial tumor growth in a mouse model. In late-stage tumors, phenotypic resistance to VEGFR2 blockade emerged, as tumors regrew during treatment after an initial period of growth suppression. This resistance to VEGF blockade involves reactivation of tumour angiogenesis, independent of VEGF and associated with hypoxia-mediated induction of other proangiogenic factors, including members of the FGF family. These other proangiogenic signals are functionally implicated in the revascularization and regrowth of tumours in the evasion phase, as FGF blockade impairs progression in the face of VEGF inhibition. Inhibition of VEGFR2 but not VEGFR1 markedly disrupted angiogenic switching, persistent angiogenesis, and initial tumor growth. In late-stage tumours, phenotypic resistance to VEGFR2 blockade emerged, as tumours regrew during treatment after an initial period of growth suppression. This resistance to VEGF blockade involves reactivation of tumour angiogenesis, independent of VEGF and associated with hypoxia-mediated induction of other proangiogenic factors, including members of the FGF family. These other proangiogenic signals are functionally implicated in the revascularization and regrowth of tumours in the evasion phase, as FGF blockade impairs progression in the face of VEGF inhibition.
A FGF-trap adenovirus has been previously reported to bind and block various ligands of the FGF family, including FGF1, FGF3, FGF7, and FGF10, thereby effectively inhibiting angiogenesis in vitro and in vivo. Indeed, adding the FGF-trap treatment in the regrowth phase of a mouse model produced a significant decrease in tumor growth compared to anti-VEGFR2 alone . This decrease in tumor burden was accompanied by a decrease in angiogenesis that was observed as decreased intratumoral vessel density.
Batchelor et al. (Batchelor et al., 2007, Cancer Cell, 11(1), 83-95) provide evidence for normalization of glioblastoma blood vessels in patients treated with a pan-VEGF receptor tyrosine kinase inhibitor, AZD2171, in a phase 2 study. The rationale for using AZD2171 was based partially on results showing a decrease in perfusion and vessel density in an in vivo breast cancer model (Miller et al., 2006, Clin. Cancer Res. 12, 281-288). Furthermore, using an orthotopic glioma model, it had previously been identified that the optimal window of time to deliver anti-VEGFR2 antibody to achieve a synergistic effect with radiation. During the window of normalization, there was improved oxygenation, increased pericyte coverage, and upregulation of angiopoietin-1 leading to a decrease in interstitial pressure and permeability within the tumour (Winkler et al., 2004, Cancer Cell 6, 553-563). The window of normalization can be quantified using magnetic resonance imaging (MRI) using MRI gradient echo, spin echo, and contrast enhancement to measure blood volume, relative vessel size, and vascular permeability.
The authors showed that progression on treatment with AZD2171 was associated with an increase in CECs, SDF1, and FGF2, while progression after drug interruptions correlated with increases in circulating progenitor cells (CPCs) and plasma FGF2 levels. The increase in plasma levels of SDF1 and FGF2 correlated with MRI measurements, demonstrated an increase in the relative vessel density and size. Thus, MRI determination of vessel normalization in combination with circulating biomarkers provides for an effective means to assess response to antiangiogenic agents.
PDGFR
A malignant tumour is the product of uncontrolled cell proliferation. Cell growth is controlled by a delicate balance between growth-promoting and growth-inhibiting factors. In normal tissue the production and activity of these factors results in differentiated cells growing in a controlled and regulated manner that maintains the normal integrity and functioning of the organ. The malignant cell has evaded this control; the natural balance is disturbed (via a variety of mechanisms) and unregulated, aberrant cell growth occurs. A growth factor of importance in tumour development is the platelet-derived growth factor (PDGF) that comprises a family of peptide growth factors that signal through cell surface tyrosine kinase receptors (PDGFR) and stimulate various cellular functions including growth, proliferation, and differentiation. PDGF expression has been demonstrated in a number of different solid tumours including glioblastomas and prostate carcinomas. The tyrosine kinase inhibitor imatinib mesylate, which has the chemical name 4-[(4-methyl-1-piperazinyl)methyl]-N-[4-methyl-3-[[4-(3-pyridinyl)-2-ylpyridinyl]amino]-phenyl]benzamide methanesulfonate, blocks activity of the Bcr-Abl oncoprotein and the cell surface tyrosine kinase receptor c-Kit, and as such is approved for the treatment of chronic myeloid leukemia and gastrointestinal stromal tumours. Imatinib mesylate is also a potent inhibitor of PDGFR kinase and is currently being evaluated for the treatment of chronic myelomonocytic leukemia and glioblastoma multiforme, based upon evidence in these diseases of activating mutations in PDGFR. In addition, sorafenib (BAY 43-9006) which has the chemical name 4-(4-(3-(4-chloro-3 (trifluoromethyl)phenyl)ureido)phenoxy)-N-2-methylpyridine-2-carboxamide, targets both the Raf signalling pathway to inhibit cell proliferation and the VEGFR/PDGFR signalling cascades to inhibit tumour angiogenesis. Sorafenib is being investigated for the treatment of a number of cancers including liver and kidney cancer.
There are conditions which are dependent on activation of PDGFR such as hypereosinophilic syndrome. PDGFR activation is also associated with other malignancies, which include chronic myelomonocytic leukemia (CMML). In another disorder, dermatofibrosarcoma protuberans, an infiltrative skin tumor, a reciprocal translocation involving the gene encoding the PDGF-B ligand results in constitutive secretion of the chimeric ligand and receptor activation. Imatinib has which is a known inhibitor of PDGFR has activity against all three of these diseases.
Advantages of a Selective Inhibitor
Development of FGFR kinase inhibitors with a differentiated selectivity profile provides a new opportunity to use these targeted agents in patient sub-groups whose disease is driven by FGFR deregulation. Compounds that exhibit reduced inhibitory action on additional kinases, particularly VEGFR2 and PDGFR-beta, offer the opportunity to have a differentiated side-effect or toxicity profile and as such allow for a more effective treatment of these indications. Inhibitors of VEGFR2 and PDGFR-beta are associated with toxicities such as hypertension or oedema respectively. In the case of VEGFR2 inhibitors this hypertensive effect is often dose limiting, may be contraindicated in certain patient populations and requires clinical management.
Biological Activity and Therapeutic Uses
The compounds of the invention, and subgroups thereof, have fibroblast growth factor receptor (FGFR) inhibiting or modulating activity and/or vascular endothelial growth factor receptor (VEGFR) inhibiting or modulating activity, and/or platelet derived growth factor receptor (PDGFR) inhibiting or modulating activity, and which will be useful in preventing or treating disease states or conditions described herein. In addition the compounds of the invention, and subgroups thereof, will be useful in preventing or treating diseases or condition mediated by the kinases. References to the preventing or prophylaxis or treatment of a disease state or condition such as cancer include within their scope alleviating or reducing the incidence of cancer.
As used herein, the term “modulation”, as applied to the activity of a kinase, is intended to define a change in the level of biological activity of the protein kinase. Thus, modulation encompasses physiological changes which effect an increase or decrease in the relevant protein kinase activity. In the latter case, the modulation may be described as “inhibition”. The modulation may arise directly or indirectly, and may be mediated by any mechanism and at any physiological level, including for example at the level of gene expression (including for example transcription, translation and/or post-translational modification), at the level of expression of genes encoding regulatory elements which act directly or indirectly on the levels of kinase activity. Thus, modulation may imply elevated/suppressed expression or over- or under-expression of a kinase, including gene amplification (i.e. multiple gene copies) and/or increased or decreased expression by a transcriptional effect, as well as hyper- (or hypo-)activity and (de)activation of the protein kinase(s) (including (de)activation) by mutation(s). The terms “modulated”, “modulating” and “modulate” are to be interpreted accordingly.
As used herein, the term “mediated”, as used e.g. in conjunction with a kinase as described herein (and applied for example to various physiological processes, diseases, states, conditions, therapies, treatments or interventions) is intended to operate limitatively so that the various processes, diseases, states, conditions, treatments and interventions to which the term is applied are those in which the kinase plays a biological role. In cases where the term is applied to a disease, state or condition, the biological role played by a kinase may be direct or indirect and may be necessary and/or sufficient for the manifestation of the symptoms of the disease, state or condition (or its aetiology or progression). Thus, kinase activity (and in particular aberrant levels of kinase activity, e.g. kinase over-expression) need not necessarily be the proximal cause of the disease, state or condition: rather, it is contemplated that the kinase mediated diseases, states or conditions include those having multifactorial aetiologies and complex progressions in which the kinase in question is only partially involved. In cases where the term is applied to treatment, prophylaxis or intervention, the role played by the kinase may be direct or indirect and may be necessary and/or sufficient for the operation of the treatment, prophylaxis or outcome of the intervention. Thus, a disease state or condition mediated by a kinase includes the development of resistance to any particular cancer drug or treatment.
Thus, for example, it is envisaged that the compounds of the invention will be useful in alleviating or reducing the incidence of cancer.
More particularly, the compounds of the formulae (I) and sub-groups thereof are inhibitors of FGFRs. For example, compounds of the invention have activity against FGFR1, FGFR2, FGFR3, and/or FGFR4, and in particular FGFRs selected from FGFR1, FGFR2 and FGFR3.
Preferred compounds are compounds that inhibit one or more FGFR selected from FGFR1, FGFR2 and FGFR3, and also FGFR4. Preferred compounds of the invention are those having IC50 values of less than 0.1 μM.
Compounds of the invention also have activity against VEGFR.
Compounds of the invention also have activity against PDGFR kinases. In particular, the compounds are inhibitors of PDGFR and, for example, inhibit PDGFR A and/or PDGFR B.
In addition many of the compounds of the invention exhibit selectivity for the FGFR1, 2, and/or 3 kinase, and/or FGFR4 compared to VEGFR (in particular VEGFR2) and/or PDGFR and such compounds represent one preferred embodiment of the invention. In particular, the compounds exhibit selectivity for VEGFR2. For example, many compounds of the invention have IC50 values against FGFR1, 2 and/or 3 and/or FGFR4 that are between a tenth and a hundredth of the IC50 against VEGFR (in particular VEGFR2) and/or PDGFR B. In particular preferred compounds of the invention have at least 10 times greater activity against or inhibition of FGFR in particular FGFR1, FGFR2, FGFR3 and/or FGFR4 than VEGFR2. More preferably the compounds of the invention have at least 100 times greater activity against or inhibition of FGFR in particular FGFR1, FGFR2, FGFR3 and/or FGFR4 than VEGFR2. This can be determined using the methods described herein.
As a consequence of their activity in modulating or inhibiting FGFR, VEGFR and/or PDGFR kinases, the compounds will be useful in providing a means of preventing the growth or inducing apoptosis of neoplasias, particularly by inhibiting angiogenesis. It is therefore anticipated that the compounds will prove useful in treating or preventing proliferative disorders such as cancers. In addition, the compounds of the invention could be useful in the treatment of diseases in which there is a disorder of proliferation, apoptosis or differentiation.
In particular tumours with activating mutants of VEGFR or upregulation of VEGFR and patients with elevated levels of serum lactate dehydrogenase may be particularly sensitive to the compounds of the invention. Patients with activating mutants of any of the isoforms of the specific RTKs discussed herein may also find treatment with the compounds of the invention particularly beneficial. For example, VEGFR overexpression in acute leukemia cells where the clonal progenitor may express VEGFR. Also, particular tumours with activating mutants or upregulation or overexpression of any of the isoforms of FGFR such as FGFR1, FGFR2 or FGFR3 or FGFR4 may be particularly sensitive to the compounds of the invention and thus patients as discussed herein with such particular tumours may also find treatment with the compounds of the invention particularly beneficial. It may be preferred that the treatment is related to or directed at a mutated form of one of the receptor tyrosine kinases, such as discussed herein. Diagnosis of tumours with such mutations could be performed using techniques known to a person skilled in the art and as described herein such as RTPCR and FISH.
Examples of cancers which may be treated (or inhibited) include, but are not limited to, a carcinoma, for example a carcinoma of the bladder, breast, colon (e.g. colorectal carcinomas such as colon adenocarcinoma and colon adenoma), kidney, epidermis, liver, lung, for example adenocarcinoma, small cell lung cancer and non-small cell lung carcinomas, oesophagus, gall bladder, ovary, pancreas e.g. exocrine pancreatic carcinoma, stomach, cervix, endometrium, thyroid, prostate, or skin, for example squamous cell carcinoma; a hematopoietic tumour of lymphoid lineage, for example leukemia, acute lymphocytic leukemia, chronic lymphocytic leukemia, B-cell lymphoma, T-cell lymphoma, Hodgkin's lymphoma, non-Hodgkin's lymphoma, hairy cell lymphoma, or Burkett's lymphoma; a hematopoietic tumour of myeloid lineage, for example leukemias, acute and chronic myelogenous leukemias, myeloproliferative syndrome, myelodysplastic syndrome, or promyelocytic leukemia; multiple myeloma; thyroid follicular cancer; a tumour of mesenchymal origin, for example fibrosarcoma or rhabdomyosarcoma; a tumour of the central or peripheral nervous system, for example astrocytoma, neuroblastoma, glioma or schwannoma; melanoma; seminoma; teratocarcinoma; osteosarcoma; xeroderma pigmentosum; keratoctanthoma; thyroid follicular cancer; or Kaposi's sarcoma.
Certain cancers are resistant to treatment with particular drugs. This can be due to the type of the tumour or can arise due to treatment with the compound. In this regard, references to multiple myeloma includes bortezomib sensitive multiple myeloma or refractory multiple myeloma. Similarly, references to chronic myelogenous leukemia includes imitanib sensitive chronic myelogenous leukemia and refractory chronic myelogenous leukemia. Chronic myelogenous leukemia is also known as chronic myeloid leukemia, chronic granulocytic leukemia or CML. Likewise, acute myelogenous leukemia, is also called acute myeloblastic leukemia, acute granulocytic leukemia, acute nonlymphocytic leukaemia or AML.
The compounds of the invention can also be used in the treatment of hematopoetic diseases of abnormal cell proliferation whether pre-malignant or stable such as myeloproliferative diseases. Myeloproliferative diseases (“MPD”s) are a group of diseases of the bone marrow in which excess cells are produced. They are related to, and may evolve into, myelodysplastic syndrome. Myeloproliferative diseases include polycythemia vera, essential thrombocythemia and primary myelofibrosis.
Thus, in the pharmaceutical compositions, uses or methods of this invention for treating a disease or condition comprising abnormal cell growth, the disease or condition comprising abnormal cell growth in one embodiment is a cancer.
Further T-cell lymphoproliferative diseases include those derived from natural Killer cells. The term B-cell lymphoma includes diffuse large B-cell lymphoma.
In addition the compounds of the invention can be used to gastrointestinal (also known as gastric) cancer e.g. gastrointestinal stromal tumours. Gastrointestinal cancer refers to malignant conditions of the gastrointestinal tract, including the esophagus, stomach, liver, biliary system, pancreas, bowels, and anus.
A further example of a tumour of mesenchymal origin is Ewing's sarcoma.
Thus, in the pharmaceutical compositions, uses or methods of this invention for treating a disease or condition comprising abnormal cell growth, the disease or condition comprising abnormal cell growth in one embodiment is a cancer.
Particular subsets of cancers include multiple myeloma, bladder, cervical, prostate and thyroid carcinomas, lung, breast, and colon cancers.
A further subset of cancers includes multiple myeloma, bladder, hepatocellular, oral squamous cell carcinoma and cervical carcinomas.
It is further envisaged that the compound of the invention having FGFR such as FGFR1 inhibitory activity, will be particularly useful in the treatment or prevention of breast cancer in particular Classic Lobular Carcinomas (CLC).
As the compounds of the invention have FGFR4 activity they will also be useful in the treatment of prostate or pituitary cancers.
In particular the compounds of the invention as FGFR inhibitors, are useful in the treatment of multiple myeloma, myeloproliferatoive disorders, endometrial cancer, prostate cancer, bladder cancer, lung cancer, ovarian cancer, breast cancer, gastric cancer, colorectal cancer, and oral squamous cell carcinoma.
Further subsets of cancer are multiple myeloma, endometrial cancer, bladder cancer, cervical cancer, prostate cancer, lung cancer, breast cancer, colorectal cancer and thyroid carcinomas.
In particular the compounds of the invention are in the treatment of multiple myeloma (in particular multiple myeloma with t(4;14) translocation or overexpressing FGFR3), prostate cancer (hormone refractory prostrate carcinomas), endometrial cancer (in particular endometrial tumours with activating mutations in FGFR2) and breast cancer (in particular lobular breast cancer).
In particular the compounds are useful for the treatment of lobular carcinomas such as CLC (Classic lobular carcinoma).
As the compounds have activity against FGFR3 they will be useful in the treatment of multiple myeloma and bladder.
In particular the compounds are useful for the treatment of t(4;14) translocation positive multiple myeloma.
As the compounds have activity against FGFR2 they will be useful in the treatment of endometrial, ovarian, gastric and colorectal cancers. FGFR2 is also overexpressed in epithelial ovarian cancer, therefore the compounds of the invention may be specifically useful in treating ovarian cancer such as epithelial ovarian cancer.
Compounds of the invention may also be useful in the treatment of tumours pre-treated with VEGFR2 inhibitor or VEGFR2 antibody (e.g. Avastin).
In particular the compounds of the invention may be useful in the treatment of VEGFR2-resistant tumours. VEGFR2 inhibitors and antibodies are used in the treatment of thyroid and renal cell carcinomas, therefore the compounds of the invention may be useful in the treatment of VEGFR2-resistant thyroid and renal cell carcinomas.
The cancers may be cancers which are sensitive to inhibition of any one or more FGFRs selected from FGFR1, FGFR2, FGFR3, FGFR4, for example, one or more FGFRs selected from FGFR1, FGFR2 or FGFR3.
Whether or not a particular cancer is one which is sensitive to inhibition of FGFR, VEGFR or PDGFR signalling may be determined by means of a cell growth assay as set out below or by a method as set out in the section headed “Methods of Diagnosis”.
It is further envisaged that the compounds of the invention, and in particular those compounds having FGFR, VEGFR or PDGFR inhibitory activity, will be particularly useful in the treatment or prevention of cancers of a type associated with or characterised by the presence of elevated levels of FGFR, VEGFR or PDGFR, for example the cancers referred to in this context in the introductory section of this application.
It has been discovered that some FGFR inhibitors can be used in combination with other anticancer agents. For example, it may be beneficial to combine an inhibitor that induces apoptosis with another agent which acts via a different mechanism to regulate cell growth thus treating two of the characteristic features of cancer development. Examples of such combinations are set out below.
It is also envisaged that the compounds of the invention will be useful in treating other conditions which result from disorders in proliferation such as type II or non-insulin dependent diabetes mellitus, autoimmune diseases, head trauma, stroke, epilepsy, neurodegenerative diseases such as Alzheimer's, motor neurone disease, progressive supranuclear palsy, corticobasal degeneration and Pick's disease for example autoimmune diseases and neurodegenerative diseases.
One sub-group of disease states and conditions where it is envisaged that the compounds of the invention will be useful consists of inflammatory diseases, cardiovascular diseases and wound healing.
FGFR, VEGFR and PDGFR are also known to play a role in apoptosis, angiogenesis, proliferation, differentiation and transcription and therefore the compounds of the invention could also be useful in the treatment of the following diseases other than cancer; chronic inflammatory diseases, for example systemic lupus erythematosus, autoimmune mediated glomerulonephritis, rheumatoid arthritis, psoriasis, inflammatory bowel disease, autoimmune diabetes mellitus, Eczema hypersensitivity reactions, asthma, COPD, rhinitis, and upper respiratory tract disease; cardiovascular diseases for example cardiac hypertrophy, restenosis, atherosclerosis; neurodegenerative disorders, for example Alzheimer's disease, AIDS-related dementia, Parkinson's disease, amyotropic lateral sclerosis, retinitis pigmentosa, spinal muscular atropy and cerebellar degeneration; glomerulonephritis; myelodysplastic syndromes, ischemic injury associated myocardial infarctions, stroke and reperfusion injury, arrhythmia, atherosclerosis, toxin-induced or alcohol related liver diseases, haematological diseases, for example, chronic anemia and aplastic anemia; degenerative diseases of the musculoskeletal system, for example, osteoporosis and arthritis, aspirin-sensitive rhinosinusitis, cystic fibrosis, multiple sclerosis, kidney diseases and cancer pain.
In addition, mutations of FGFR2 are associated with several severe abnormalities in human skeletal development and thus the compounds of invention could be useful in the treatment of abnormalities in human skeletal development, including abnormal ossification of cranial sutures (craniosynostosis), Apert (AP) syndrome, Crouzon syndrome, Jackson-Weiss syndrome, Beare-Stevenson cutis gyrate syndrome, and Pfeiffer syndrome.
It is further envisaged that the compound of the invention having FGFR such as FGFR2 or FGFR3 inhibitory activity, will be particularly useful in the treatment or prevention of the skeletal diseases. Particular skeletal diseases are achondroplasia or thanatophoric dwarfism (also known as thanatophoric dysplasia).
It is further envisaged that the compound of the invention having FGFR such as FGFR1, FGFR2 or FGFR3 inhibitory activity, will be particularly useful in the treatment or prevention in pathologies in which progressive fibrosis is a symptom. Fibrotic conditions in which the compounds of the inventions may be useful in the treatment of in include diseases exhibiting abnormal or excessive deposition of fibrous tissue for example in liver cirrhosis, glomerulonephritis, pulmonary fibrosis, systemic fibrosis, rheumatoid arthritis, as well as the natural process of wound healing. In particular the compounds of the inventions may also be useful in the treatment of lung fibrosis in particular in idiopathic pulmonary fibrosis.
The over-expression and activation of FGFR and VEGFR in tumor-associated vasculature has also suggested a role for compounds of the invention in preventing and disrupting initiation of tumor angiogenesis. In particular the compounds of the invention may be useful in the treatment of cancer, metastasis, leukemia's such as CLL, ocular diseases such as age-related macular degeneration in particular wet form of age-related macular degeneration, ischemic proliferative retinopathies such as retinopathy of prematurity (ROP) and diabetic retinopathy, rheumatoid arthritis and hemangioma.
Since compounds of the invention inhibit PDGFR they may also be useful in the treatment of a number of tumour and leukemia types including glioblastomas such as glioblastoma multiforme, prostate carcinomas, gastrointestinal stromal tumours, liver cancer, kidney cancer, chronic myeloid leukemia, chronic myelomonocytic leukemia (CMML) as well as hypereosinophilic syndrome, a rare proliferative hematological disorder and dermatofibrosarcoma protuberans, an infiltrative skin tumour.
The activity of the compounds of the invention as inhibitors of FGFR1-4, VEGFR and/or PDGFR NB can be measured using the assays set forth in the examples below and the level of activity exhibited by a given compound can be defined in terms of the IC50 value. Preferred compounds of the present invention are compounds having an IC50 value of less than 1 μM, more preferably less than 0.1 μM.
The invention provides compounds that have FGFR inhibiting or modulating activity, and which it is envisaged will be useful in preventing or treating disease states or conditions mediated by FGFR kinases.
In one embodiment, there is provided a compound as defined herein for use in therapy. In a further embodiment, there is provided a compound as defined herein for use in the prophylaxis or treatment of a disease state or condition mediated by a FGFR kinase.
Thus, for example, it is envisaged that the compounds of the invention will be useful in alleviating or reducing the incidence of cancer. Therefore, in a further embodiment, there is provided a compound as defined herein for use in the prophylaxis or treatment of cancer.
Accordingly, in one aspect, the invention provides the use of a compound for the manufacture of a medicament for the prophylaxis or treatment of a disease state or condition mediated by a FGFR kinase, the compound having the formula (I) as defined herein.
In one embodiment, there is provided the use of a compound as defined herein for the manufacture of a medicament for the prophylaxis or treatment of a disease state or condition as described herein.
In a further embodiment, there is provided the use of a compound as defined herein for the manufacture of a medicament for the prophylaxis or treatment of cancer.
Accordingly, the invention provides inter alia:
A method for the prophylaxis or treatment of a disease state or condition mediated by a FGFR kinase, which method comprises administering to a subject in need thereof a compound of the formula (I) as defined herein.
In one embodiment, there is provided a method for the prophylaxis or treatment of a disease state or condition as described herein, which method comprises administering to a subject in need thereof a compound of the formula (I) as defined herein.
In a further embodiment, there is provided a method for the prophylaxis or treatment of cancer, which method comprises administering to a subject in need thereof a compound of the formula (I) as defined herein.
A method for alleviating or reducing the incidence of a disease state or condition mediated by a FGFR kinase, which method comprises administering to a subject in need thereof a compound of the formula (I) as defined herein.
A method of inhibiting a FGFR kinase, which method comprises contacting the kinase with a kinase-inhibiting compound of the formula (I) as defined herein.
A method of modulating a cellular process (for example cell division) by inhibiting the activity of a FGFR kinase using a compound of the formula (I) as defined herein.
A compound of formula (I) as defined herein for use as a modulator of a cellular process (for example cell division) by inhibiting the activity of a FGFR kinase.
A compound of formula (I) as defined herein for use as a modulator (e.g. inhibitor) of FGFR.
The use of a compound of formula (I) as defined herein for the manufacture of a medicament for modulating (e.g. inhibiting) the activity of FGFR.
Use of a compound of formula (I) as defined herein in the manufacture of a medicament for modulating a cellular process (for example cell division) by inhibiting the activity of a FGFR kinase.
The use of a compound of the formula (I) as defined herein for the manufacture of a medicament for prophylaxis or treatment of a disease or condition characterised by up-regulation of a FGFR kinase (e.g. FGFR1 or FGFR2 or FGFR3 or FGFR4).
The use of a compound of the formula (I) as defined herein for the manufacture of a medicament for the prophylaxis or treatment of a cancer, the cancer being one which is characterised by up-regulation of a FGFR kinase (e.g. FGFR1 or FGFR2 or FGFR3 or FGFR4).
The use of a compound of the formula (I) as defined herein for the manufacture of a medicament for the prophylaxis or treatment of cancer in a patient selected from a sub-population possessing a genetic aberrations of FGFR3 kinase.
The use of a compound of the formula (I) as defined herein for the manufacture of a medicament for the prophylaxis or treatment of cancer in a patient who has been diagnosed as forming part of a sub-population possessing a genetic aberrations of FGFR3 kinase.
A method for the prophylaxis or treatment of a disease or condition characterised by up-regulation of a FGFR kinase (e.g. FGFR1 or FGFR2 or FGFR3 or FGFR4), the method comprising administering a compound of the formula (I) as defined herein.
A method for alleviating or reducing the incidence of a disease or condition characterised by up-regulation of a FGFR kinase (e.g. FGFR1 or FGFR2 or FGFR3 or FGFR4), the method comprising administering a compound of the formula (I) as defined herein.
A method for the prophylaxis or treatment of (or alleviating or reducing the incidence of) cancer in a patient suffering from or suspected of suffering from cancer; which method comprises (i) subjecting a patient to a diagnostic test to determine whether the patient possesses a genetic aberrations of FGFR3 gene; and (ii) where the patient does possess the said variant, thereafter administering to the patient a compound of the formula (I) as defined herein having FGFR3 kinase inhibiting activity.
A method for the prophylaxis or treatment of (or alleviating or reducing the incidence of) a disease state or condition characterised by up-regulation of an FGFR kinase (e.g. e.g. FGFR1 or FGFR2 or FGFR3 or FGFR4); which method comprises (i) subjecting a patient to a diagnostic test to detect a marker characteristic of up-regulation of a FGFR kinase (e.g. FGFR1 or FGFR2 or FGFR3 or FGFR4) and (ii) where the diagnostic test is indicative of up-regulation of FGFR kinase, thereafter administering to the patient a compound of the formula (I) as defined herein having FGFR kinase inhibiting activity.
Mutated Kinases
Drug resistant kinase mutations can arise in patient populations treated with kinase inhibitors. These occur, in part, in the regions of the protein that bind to or interact with the particular inhibitor used in therapy. Such mutations reduce or increase the capacity of the inhibitor to bind to and inhibit the kinase in question. This can occur at any of the amino acid residues which interact with the inhibitor or are important for supporting the binding of said inhibitor to the target. An inhibitor that binds to a target kinase without requiring the interaction with the mutated amino acid residue will likely be unaffected by the mutation and will remain an effective inhibitor of the enzyme (Carter et al (2005), PNAS, 102(31), 11011-110116).
A study in gastric cancer patient samples showed the presence of two mutations in FGFR2, Ser167Pro in exon 111a and a splice site mutation 940-2A-G in exon 111c. These mutations are identical to the germline activating mutations that cause craniosynotosis syndromes and were observed in 13% of primary gastric cancer tissues studied. In addition activating mutations in FGFR3 were observed in 5% of the patient samples tested and overexpression of FGFRs has been correlated with a poor prognosis in this patient group (Jang et. al. (2001) Cancer Research 61 3541-3543.
There are mutations that have been observed in PDGFR in imatinib-treated patients, in particular the T674I mutation. The clinical importance of these mutations may grow considerably, as to date it appears to represent the primary mechanism of resistance to src/Abl inhibitors in patients.
In addition there are chromosomal translocations or point mutations that have been observed in FGFR which give rise to gain-of-function, over-expressed, or constitutively active biological states.
The compounds of the invention would therefore find particular application in relation to cancers which express a mutated molecular target such as FGFR or PDGFR including PDGFR-beta and PDGFR-alpha in particular the T6741 mutation of PDGFR. Diagnosis of tumours with such mutations could be performed using techniques known to a person skilled in the art and as described herein such as RTPCR and FISH.
It has been suggested that mutations of a conserved threonine residue at the ATP binding site of FGFR would result in inhibitor resistance. The amino acid valine 561 has been mutated to a methionine in FGFR1 which corresponds to previously reported mutations found in Abl (T315) and EGFR (T766) that have been shown to confer resistance to selective inhibitors. Assay data for FGFR1 V561 M showed that this mutation conferred resistance to a tyrosine kinase inhibitor compared to that of the wild type.
Advantages of the Compositions of the Invention
The compounds of the formula (I) have a number of advantages over prior art compounds.
For example, the compounds of formula (I) have advantageous ADMET and physiochemical properties over prior art compounds. In particular, many of the compounds of formula (I) have exhibit reduced HERG binding, better P450 profile, better metabolic stability (for example as determined with mouse liver microsomes) and/or better solubility. The compounds of the invention also have advantageous biological and pharmacokinetic properties such as improved cell potency, increased selectivity in vitro or in cells over related kinases, display oral bioavailability (oral exposure or AUC), and/or beneficial clearance (e.g. low clearance). The compounds of formula (I) are potentially less toxic than prior art compounds. Many of the compounds of formula (I) have a reduced toxicity and therefore a greater therapeutic window.
Potentially the compositions of the invention have physiochemical properties suitable for oral exposure.
The composition as defined herein should exhibit improved oral bioavailability relative to prior art compounds. Oral bioavailability can be defined as the ratio (F) of the plasma exposure of a compound when dosed by the oral route to the plasma exposure of the compound when dosed by the intravenous (i.v.) route, expressed as a percentage.
Compositions having an oral bioavailability (F value) of greater than 30%, more preferably greater than 40%, are particularly advantageous in that they may be administered orally rather than, or as well as, by parenteral administration.
Furthermore, the compounds of formula (I) are both more potent and more selective in their activities against different kinases, and demonstrate enhanced selectivity for and potency against FGFR kinases (e.g. FGFR1, FGFR2, FGFR3 and/or FGFR4). The compounds of formula (I) are in particular potent at inhibiting FGFR in vitro and in cells. The IC50 for the compound of formula (I) against the isolated FGFR enzymes in an in vitro radiometric assay and in cells can be determined using the assays described herein. The compounds demonstrate improved cell activity in proliferation and clonogenic assays and/or potency in cell-based mechanistic assays for example one which measures FGF-induced ERK1/2 phosphorylation, a downstream substrate of FGFR. This indicates improved anti-cancer activity against a wide range of solid tumour and leukemic (e.g. multiple myeloma) cell lines.
In addition the compounds exhibit selectivity against the closely related kinases VEGFR2 and/or PDGFR. Therefore the compounds have decreased activity against VEGFR2 and/or PDGFR. In particular the compounds show an approximate >10-fold difference in potency against VEGFR2.
Many of the compounds of formula (I) are advantageous over prior art compounds in that they have different susceptibilities to P450 enzymes. For example, the preferred compounds of formula (I) have IC50 values of greater than 10 μM against each of the cytochrome P450 enzymes 1A2, 2C9, 2C19, 3A4 and 2D6.
In addition, many compounds of the invention are also advantageous over prior art compounds in that they exhibit improvements with regard to drug metabolism and pharmacokinetic properties. In particular many of the compounds of the invention have reduced plasma protein binding and/or better metabolic stability in mouse liver microsomes. In addition many of the compounds of the inventions have improved solubility in aqueous solution and better physicochemical properties, e.g. a lower logD. These features could confer the advantage of having more free drug available in the systemic circulation to reach the appropriate site of action to exert its therapeutic effect. Increased free fraction to exert pharmacological action in tumours potentially leads to improved efficacy which thereby allows reduced dosages to be administered. Thus, the compounds of formula (I) should exhibit reduced dosage requirements and should be more readily formulated and administered.
hERG
In the late 1990s a number of drugs, approved by the US FDA, had to be withdrawn from sale in the US when it was discovered they were implicated in deaths caused by heart malfunction. It was subsequently found that a side effect of these drugs was the development of arrhythmias caused by the blocking of hERG channels in heart cells. The hERG channel is one of a family of potassium ion channels the first member of which was identified in the late 1980s in a mutant Drosophila melanogaster fruitfly (see Jan, L. Y. and Jan, Y. N. (1990). A Superfamily of Ion Channels. Nature, 345(6277):672). The biophysical properties of the hERG potassium ion channel are described in Sanguinetti, M. C., Jiang, C., Curran, M. E., and Keating, M. T. (1995). A Mechanistic Link Between an Inherited and an Acquired Cardiac Arrhythmia: HERG encodes the Ikr potassium channel. Cell, 81:299-307, and Trudeau, M. C., Warmke, J. W., Ganetzky, B., and Robertson, G. A. (1995). HERG, a Human Inward Rectifier in the Voltage-Gated Potassium Channel Family. Science, 269:92-95.
The elimination of hERG blocking activity remains an important consideration in the development of any new drug. It has been found that many compounds of the formula (I) have low hERG activity and a good separation between FGFR inhibitory activity and hERG activity.
One method for measurement of hERG activity is the patch clamp electrophysiology method. Alternative methods for measurement of functional hERG activity include hERG binding assays, which can use commercially available membranes isolated from cells stably expressing the hERG channel or commercially available cell lines expressing the hERG channel.
The preferred compounds of formula (I) have low hERG ion channel blocking activity. Preferred compounds of the formula (I) have mean IC50 values against hERG that are greater than 30 times, or greater than 40 times, or greater than 50 times the IC50 values of the compounds in cellular proliferation assays. Preferred compounds of the formula (I) have mean IC50 values against hERG that are greater than 5 μM, more particularly greater than 10 μM, and more preferably greater than 15 μM. Some compounds of the invention have mean IC50 values against hERG that are greater than 30 μM or display % inhibition representative of such an IC50 at concentrations of 1, 3, 10 or 30 μM.
Pharmaceutical Formulations
While it is possible for the active compound to be administered alone, it is preferable to present it as a pharmaceutical composition (e.g. formulation) comprising at least one active compound of the invention together with one or more pharmaceutically acceptable carriers, adjuvants, excipients, diluents, fillers, buffers, stabilisers, preservatives, lubricants, or other materials well known to those skilled in the art and optionally other therapeutic or prophylactic agents.
Thus, the present invention further provides pharmaceutical compositions, as defined above, and methods of making a pharmaceutical composition comprising admixing at least one active compound, as defined above, together with one or more pharmaceutically acceptable carriers, excipients, buffers, adjuvants, stabilizers, or other materials, as described herein.
The term “pharmaceutically acceptable” as used herein pertains to compounds, materials, compositions, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of a subject (e.g. human) without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio. Each carrier, excipient, etc. must also be “acceptable” in the sense of being compatible with the other ingredients of the formulation.
Pharmaceutical compositions containing compounds of the formula (I) can be formulated in accordance with known techniques, see for example, Remington's Pharmaceutical Sciences, Mack Publishing Company, Easton, Pa., USA.
Accordingly, in a further aspect, the invention provides compounds of the formula (I) and sub-groups thereof as defined herein in the form of pharmaceutical compositions.
The pharmaceutical compositions can be in any form suitable for oral, parenteral, topical, intranasal, ophthalmic, otic, rectal, intra-vaginal, or transdermal administration. Where the compositions are intended for parenteral administration, they can be formulated for intravenous, intramuscular, intraperitoneal, subcutaneous administration or for direct delivery into a target organ or tissue by injection, infusion or other means of delivery. The delivery can be by bolus injection, short term infusion or longer term infusion and can be via passive delivery or through the utilisation of a suitable infusion pump.
Pharmaceutical formulations adapted for parenteral administration include aqueous and non-aqueous sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats, co-solvents, organic solvent mixtures, cyclodextrin complexation agents, emulsifying agents (for forming and stabilizing emulsion formulations), liposome components for forming liposomes, gellable polymers for forming polymeric gels, lyophilisation protectants and combinations of agents for, inter alia, stabilising the active ingredient in a soluble form and rendering the formulation isotonic with the blood of the intended recipient. Pharmaceutical formulations for parenteral administration may also take the form of aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents (R. G. Strickly (2004), Solubilizing Excipients in oral and injectable formulations, Pharmaceutical Research, Vol 21(2), p 201-230).
Liposomes are closed spherical vesicles composed of outer lipid bilayer membranes and an inner aqueous core and with an overall diameter of <100 μm. Depending on the level of hydrophobicity, moderately hydrophobic drugs can be solubilized by liposomes if the drug becomes encapsulated or intercalated within the liposome. Hydrophobic drugs can also be solubilized by liposomes if the drug molecule becomes an integral part of the lipid bilayer membrane, and in this case, the hydrophobic drug is dissolved in the lipid portion of the lipid bilayer.
The formulations may be presented in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilised) condition requiring only the addition of the sterile liquid carrier, for example water for injections, immediately prior to use.
The pharmaceutical formulation can be prepared by lyophilising a compound of formula (I), or sub-groups thereof. Lyophilisation refers to the procedure of freeze-drying a composition. Freeze-drying and lyophilisation are therefore used herein as synonyms.
Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets.
Pharmaceutical compositions of the present invention for parenteral injection can also comprise pharmaceutically acceptable sterile aqueous or non-aqueous solutions, dispersions, suspensions or emulsions as well as sterile powders for reconstitution into sterile injectable solutions or dispersions just prior to use. Examples of suitable aqueous and nonaqueous carriers, diluents, solvents or vehicles include water, ethanol, polyols (such as glycerol, propylene glycol, polyethylene glycol, and the like), carboxymethylcellulose and suitable mixtures thereof, vegetable oils (such as olive oil), and injectable organic esters such as ethyl oleate. Proper fluidity can be maintained, for example, by the use of coating materials such as lecithin, by the maintenance of the required particle size in the case of dispersions, and by the use of surfactants.
The compositions of the present invention may also contain adjuvants such as preservatives, wetting agents, emulsifying agents, and dispersing agents. Prevention of the action of microorganisms may be ensured by the inclusion of various antibacterial and antifungal agents, for example, paraben, chlorobutanol, phenol sorbic acid, and the like. It may also be desirable to include isotonic agents such as sugars, sodium chloride, and the like. Prolonged absorption of the injectable pharmaceutical form may be brought about by the inclusion of agents which delay absorption such as aluminium monostearate and gelatin.
In one preferred embodiment of the invention, the pharmaceutical composition is in a form suitable for i.v. administration, for example by injection or infusion. For intravenous administration, the solution can be dosed as is, or can be injected into an infusion bag (containing a pharmaceutically acceptable excipient, such as 0.9% saline or 5% dextrose), before administration.
In another preferred embodiment, the pharmaceutical composition is in a form suitable for sub-cutaneous (s.c.) administration.
Pharmaceutical dosage forms suitable for oral administration include tablets, capsules, caplets, pills, lozenges, syrups, solutions, powders, granules, elixirs and suspensions, sublingual tablets, wafers or patches and buccal patches.
Thus, tablet compositions can contain a unit dosage of active compound together with an inert diluent or carrier such as a sugar or sugar alcohol, eg; lactose, sucrose, sorbitol or mannitol; and/or a non-sugar derived diluent such as sodium carbonate, calcium phosphate, calcium carbonate, or a cellulose or derivative thereof such as methyl cellulose, ethyl cellulose, hydroxypropyl methyl cellulose, and starches such as corn starch. Tablets may also contain such standard ingredients as binding and granulating agents such as polyvinylpyrrolidone, disintegrants (e.g. swellable crosslinked polymers such as crosslinked carboxymethylcellulose), lubricating agents (e.g. stearates), preservatives (e.g. parabens), antioxidants (e.g. BHT), buffering agents (for example phosphate or citrate buffers), and effervescent agents such as citrate/bicarbonate mixtures. Such excipients are well known and do not need to be discussed in detail here.
Capsule formulations may be of the hard gelatin or soft gelatin variety and can contain the active component in solid, semi-solid, or liquid form. Gelatin capsules can be formed from animal gelatin or synthetic or plant derived equivalents thereof.
The solid dosage forms (eg; tablets, capsules etc.) can be coated or un-coated, but typically have a coating, for example a protective film coating (e.g. a wax or varnish) or a release controlling coating. The coating (e.g. a EudragitTM type polymer) can be designed to release the active component at a desired location within the gastro-intestinal tract. Thus, the coating can be selected so as to degrade under certain pH conditions within the gastrointestinal tract, thereby selectively release the compound in the stomach or in the ileum or duodenum.
Instead of, or in addition to, a coating, the drug can be presented in a solid matrix comprising a release controlling agent, for example a release delaying agent which may be adapted to selectively release the compound under conditions of varying acidity or alkalinity in the gastrointestinal tract. Alternatively, the matrix material or release retarding coating can take the form of an erodible polymer (e.g. a maleic anhydride polymer) which is substantially continuously eroded as the dosage form passes through the gastrointestinal tract. As a further alternative, the active compound can be formulated in a delivery system that provides osmotic control of the release of the compound. Osmotic release and other delayed release or sustained release formulations may be prepared in accordance with methods well known to those skilled in the art.
The pharmaceutical compositions comprise from approximately 1% to approximately 95%, preferably from approximately 20% to approximately 90%, active ingredient. Pharmaceutical compositions according to the invention may be, for example, in unit dose form, such as in the form of ampoules, vials, suppositories, dragees, tablets or capsules.
Pharmaceutical compositions for oral administration can be obtained by combining the active ingredient with solid carriers, if desired granulating a resulting mixture, and processing the mixture, if desired or necessary, after the addition of appropriate excipients, into tablets, dragee cores or capsules. It is also possible for them to be incorporated into plastics carriers that allow the active ingredients to diffuse or be released in measured amounts.
The compounds of the invention can also be formulated as solid dispersions. Solid dispersions are homogeneous extremely fine disperse phases of two or more solids. Solid solutions (molecularly disperse systems), one type of solid dispersion, are well known for use in pharmaceutical technology (see (Chiou and Riegelman (1971), J. Pharm. Sci., 60, 1281-1300) and are useful in increasing dissolution rates and increasing the bioavailability of poorly water-soluble drugs.
This invention also provides solid dosage forms comprising the solid solution described above. Solid dosage forms include tablets, capsules and chewable tablets. Known excipients can be blended with the solid solution to provide the desired dosage form. For example, a capsule can contain the solid solution blended with (a) a disintegrant and a lubricant, or (b) a disintegrant, a lubricant and a surfactant. A tablet can contain the solid solution blended with at least one disintegrant, a lubricant, a surfactant, and a glidant. The chewable tablet can contain the solid solution blended with a bulking agent, a lubricant, and if desired an additional sweetening agent (such as an artificial sweetener), and suitable flavours.
The pharmaceutical formulations may be presented to a patient in “patient packs” containing an entire course of treatment in a single package, usually a blister pack. Patient packs have an advantage over traditional prescriptions, where a pharmacist divides a patient's supply of a pharmaceutical from a bulk supply, in that the patient always has access to the package insert contained in the patient pack, normally missing in patient prescriptions. The inclusion of a package insert has been shown to improve patient compliance with the physician's instructions.
Compositions for topical use include ointments, creams, sprays, patches, gels, liquid drops and inserts (for example intraocular inserts). Such compositions can be formulated in accordance with known methods.
Examples of formulations for rectal or intra-vaginal administration include pessaries and suppositories which may be, for example, formed from a shaped moldable or waxy material containing the active compound.
Compositions for administration by inhalation may take the form of inhalable powder compositions or liquid or powder sprays, and can be administrated in standard form using powder inhaler devices or aerosol dispensing devices. Such devices are well known. For administration by inhalation, the powdered formulations typically comprise the active compound together with an inert solid powdered diluent such as lactose.
The compounds of the formula (I) will generally be presented in unit dosage form and, as such, will typically contain sufficient compound to provide a desired level of biological activity. For example, a formulation may contain from 1 nanogram to 2 grams of active ingredient, e.g. from 1 nanogram to 2 milligrams of active ingredient. Within this range, particular sub-ranges of compound are 0.1 milligrams to 2 grams of active ingredient (more usually from 10 milligrams to 1 gram, e.g. 50 milligrams to 500 milligrams), or 1 microgram to 20 milligrams (for example 1 microgram to 10 milligrams, e.g. 0.1 milligrams to 2 milligrams of active ingredient).
For oral compositions, a unit dosage form may contain from 1 milligram to 2 grams, more typically 10 milligrams to 1 gram, for example 50 milligrams to 1 gram, e.g. 100 milligrams to 1 gram, of active compound.
The active compound will be administered to a patient in need thereof (for example a human or animal patient) in an amount sufficient to achieve the desired therapeutic effect.
The skilled person will have the expertise to select the appropriate amounts of ingredients for use in the formulations. For example tablets and capsules typically contain 0-20% disintegrants, 0-5% lubricants, 0-5% flow aids and/or 0-100% fillers/or bulking agents (depending on drug dose). They may also contain 0-10% polymer binders, 0-5% antioxidants, 0-5% Pigments. Slow release tablets would in addition contain 0-100% polymers (depending on dose). The film coats of the tablet or capsule typically contain 0-10% polymers, 0-3% pigments, and/or 0-2% plasticizers.
Parenteral formulations typically contain 0-20% buffers, 0-50% cosolvents, and/or 0-100% Water for Injection (WFI) (depending on dose and if freeze dried). Formulations for intramuscular depots may also contain 0-100% oils.
Examples of Pharmaceutical Formulations
(i) Tablet Formulation
A tablet composition containing a compound of the formula (I) is prepared by mixing 50 mg of the compound with 197 mg of lactose (BP) as diluent, and 3 mg magnesium stearate as a lubricant and compressing to form a tablet in known manner.
(ii) Capsule Formulation
A capsule formulation is prepared by mixing 100 mg of a compound of the formula (I) with 100 mg lactose and filling the resulting mixture into standard opaque hard gelatin capsules.
(iii) Injectable Formulation I
A parenteral composition for administration by injection can be prepared by dissolving a compound of the formula (I) (e.g. in a salt form) in water containing 10% propylene glycol to give a concentration of active compound of 1.5% by weight. The solution is then sterilised by filtration, filled into an ampoule and sealed.
(iv) Injectable Formulation II
A parenteral composition for injection is prepared by dissolving in water a compound of the formula (I) (e.g. in salt form) (2 mg/ml) and mannitol (50 mg/ml), sterile filtering the solution and filling into sealable 1 ml vials or ampoules.
v) Injectable formulation III
A formulation for i.v. delivery by injection or infusion can be prepared by dissolving the compound of formula (I) (e.g. in a salt form) in water at 20 mg/ml. The vial is then sealed and sterilised by autoclaving.
vi) Injectable formulation IV
A formulation for i.v. delivery by injection or infusion can be prepared by dissolving the compound of formula (I) (e.g. in a salt form) in water containing a buffer (e.g. 0.2 M acetate pH 4.6) at 20 mg/ml. The vial is then sealed and sterilised by autoclaving.
(vii) Subcutaneous Injection Formulation
A composition for sub-cutaneous administration is prepared by mixing a compound of the formula (I) with pharmaceutical grade corn oil to give a concentration of 5 mg/ml. The composition is sterilised and filled into a suitable container.
viii) Lyophilised Formulation
Aliquots of formulated compound of formula (I) are put into 50 ml vials and lyophilized. During lyophilisation, the compositions are frozen using a one-step freezing protocol at (−45° C.). The temperature is raised to −10° C. for annealing, then lowered to freezing at −45° C., followed by primary drying at +25° C. for approximately 3400 minutes, followed by a secondary drying with increased steps if temperature to 50° C. The pressure during primary and secondary drying is set at 80 millitor.
Methods of Treatment
It is envisaged that the compounds of the formula (I) and sub-groups thereof as defined herein will be useful in the prophylaxis or treatment of a range of disease states or conditions mediated by FGFR. Examples of such disease states and conditions are set out above.
The compounds are generally administered to a subject in need of such administration, for example a human or animal patient, preferably a human.
The compounds will typically be administered in amounts that are therapeutically or prophylactically useful and which generally are non-toxic.
However, in certain situations (for example in the case of life threatening diseases), the benefits of administering a compound of the formula (I) may outweigh the disadvantages of any toxic effects or side effects, in which case it may be considered desirable to administer compounds in amounts that are associated with a degree of toxicity.
The compounds may be administered over a prolonged term to maintain beneficial therapeutic effects or may be administered for a short period only. Alternatively they may be administered in a pulsatile or continuous manner.
A typical daily dose of the compound of formula (I) can be in the range from 100 picograms to 100 milligrams per kilogram of body weight, more typically 5 nanograms to 25 milligrams per kilogram of bodyweight, and more usually 10 nanograms to 15 milligrams per kilogram (e.g. 10 nanograms to 10 milligrams, and more typically 1 microgram per kilogram to 20 milligrams per kilogram, for example 1 microgram to 10 milligrams per kilogram) per kilogram of bodyweight although higher or lower doses may be administered where required. The compound of the formula (I) can be administered on a daily basis or on a repeat basis every 2, or 3, or 4, or 5, or 6, or 7, or 10 or 14, or 21, or 28 days for example.
The compounds of the invention may be administered orally in a range of doses, for example 1 to 1500 mg, 2 to 800 mg, or 5 to 500 mg, e.g. 2 to 200 mg or 10 to 1000 mg, particular examples of doses including 10, 20, 50 and 80 mg. The compound may be administered once or more than once each day. The compound can be administered continuously (i.e. taken every day without a break for the duration of the treatment regimen). Alternatively, the compound can be administered intermittently, i.e. taken continuously for a given period such as a week, then discontinued for a period such as a week and then taken continuously for another period such as a week and so on throughout the duration of the treatment regimen. Examples of treatment regimens involving intermittent administration include regimens wherein administration is in cycles of one week on, one week off; or two weeks on, one week off; or three weeks on, one week off; or two weeks on, two weeks off; or four weeks on two weeks off; or one week on three weeks off—for one or more cycles, e.g. 2, 3, 4, 5, 6, 7, 8, 9 or 10 or more cycles.
In one particular dosing schedule, a patient will be given an infusion of a compound of the formula (I) for periods of one hour daily for up to ten days in particular up to five days for one week, and the treatment repeated at a desired interval such as two to four weeks, in particular every three weeks.
More particularly, a patient may be given an infusion of a compound of the formula (I) for periods of one hour daily for 5 days and the treatment repeated every three weeks.
In another particular dosing schedule, a patient is given an infusion over 30 minutes to 1 hour followed by maintenance infusions of variable duration, for example 1 to 5 hours, e.g. 3 hours.
In a further particular dosing schedule, a patient is given a continuous infusion for a period of 12 hours to 5 days, an in particular a continuous infusion of 24 hours to 72 hours.
Ultimately, however, the quantity of compound administered and the type of composition used will be commensurate with the nature of the disease or physiological condition being treated and will be at the discretion of the physician.
The compounds as defined herein can be administered as the sole therapeutic agent or they can be administered in combination therapy with one of more other compounds for treatment of a particular disease state, for example a neoplastic disease such as a cancer as hereinbefore defined. Examples of other therapeutic agents or treatments that may be administered together (whether concurrently or at different time intervals) with the compounds of the formula (I) include but are not limited to:

    Topoisomerase I inhibitors
    Antimetabolites
    Tubulin targeting agents
    DNA binder and topoisomerase II inhibitors
    Alkylating Agents
    Monoclonal Antibodies.
    Anti-Hormones
    Signal Transduction Inhibitors
    Proteasome Inhibitors
    DNA methyl transferases
    Cytokines and retinoids
    Chromatin targeted therapies
    Radiotherapy, and,
    Other therapeutic or prophylactic agents; for example agents that reduce or alleviate some of the side effects associated with chemotherapy. Particular examples of such agents include anti-emetic agents and agents that prevent or decrease the duration of chemotherapy-associated neutropenia and prevent complications that arise from reduced levels of red blood cells or white blood cells, for example erythropoietin (EPO), granulocyte macrophage-colony stimulating factor (GM-CSF), and granulocyte-colony stimulating factor (G-CSF). Also included are agents that inhibit bone resorption such as bisphosphonate agents e.g. zoledronate, pamidronate and ibandronate, agents that suppress inflammatory responses (such as dexamethazone, prednisone, and prednisolone) and agents used to reduce blood levels of growth hormone and IGF-I in acromegaly patients such as synthetic forms of the brain hormone somatostatin, which includes octreotide acetate which is a long-acting octapeptide with pharmacologic properties mimicking those of the natural hormone somatostatin. Further included are agents such as leucovorin, which is used as an antidote to drugs that decrease levels of folic acid, or folinic acid it self and agents such as megestrol acetate which can be used for the treatment of side-effects including oedema and thromoembolic episodes.


Each of the compounds present in the combinations of the invention may be given in individually varying dose schedules and via different routes.
Where the compound of the formula (I) is administered in combination therapy with one, two, three, four or more other therapeutic agents (preferably one or two, more preferably one), the compounds can be administered simultaneously or sequentially. When administered sequentially, they can be administered at closely spaced intervals (for example over a period of 5-10 minutes) or at longer intervals (for example 1, 2, 3, 4 or more hours apart, or even longer periods apart where required), the precise dosage regimen being commensurate with the properties of the therapeutic agent(s).
The compounds of the invention may also be administered in conjunction with non-chemotherapeutic treatments such as radiotherapy, photodynamic therapy, gene therapy; surgery and controlled diets.
For use in combination therapy with another chemotherapeutic agent, the compound of the formula (I) and one, two, three, four or more other therapeutic agents can be, for example, formulated together in a dosage form containing two, three, four or more therapeutic agents. In an alternative, the individual therapeutic agents may be formulated separately and presented together in the form of a kit, optionally with instructions for their use.
A person skilled in the art would know through his or her common general knowledge the dosing regimes and combination therapies to use.
Methods of Diagnosis
Prior to administration of a compound of the formula (I), a patient may be screened to determine whether a disease or condition from which the patient is or may be suffering is one which would be susceptible to treatment with a compound having activity against FGFR, VEGFR and for PDGFR.
For example, a biological sample taken from a patient may be analysed to determine whether a condition or disease, such as cancer, that the patient is or may be suffering from is one which is characterised by a genetic abnormality or abnormal protein expression which leads to up-regulation of the levels or activity of FGFR, VEGFR and for PDGFR or to sensitisation of a pathway to normal FGFR, VEGFR and for PDGFR activity, or to upregulation of these growth factor signalling pathways such as growth factor ligand levels or growth factor ligand activity or to upregulation of a biochemical pathway downstream of FGFR, VEGFR and for PDGFR activation.
Examples of such abnormalities that result in activation or sensitisation of the FGFR, VEGFR and/or PDGFR signal include loss of, or inhibition of apoptotic pathways, up-regulation of the receptors or ligands, or presence of mutant variants of the receptors or ligands e.g. PTK variants. Tumours with mutants of FGFR1, FGFR2 or FGFR3 or FGFR4 or up-regulation, in particular over-expression of FGFR1, or gain-of-function mutants of FGFR2 or FGFR3 may be particularly sensitive to FGFR inhibitors.
For example, point mutations engendering gain-of-function in FGFR2 have been identified in a number of conditions (Lemonnier, et al. (2001), J. Bone Miner. Res., 16, 832-845). In particular activating mutations in FGFR2 have been identified in 10% of endometrial tumours (Pollock et al, Oncogene, 2007, 26, 7158-7162).
In addition, genetic aberrations of the FGFR3 receptor tyrosine kinase such as chromosomal translocations or point mutations resulting in ectopically expressed or deregulated, constitutively active, FGFR3 receptors have been identified and are linked to a subset of multiple myelomas, bladder and cervical carcinomas (Powers, C. J., et al. (2000), Endocr. Rel. Cancer, 7, 165). A particular mutation T6741 of the PDGF receptor has been identified in imatinib-treated patients.
In addition, a gene amplification of 8p12-p11.2 was demonstrated in  ̃50% of lobular breast cancer (CLC) cases and this was shown to be linked with an increased expression of FGFR1. Preliminary studies with siRNA directed against FGFR1, or a small molecule inhibitor of the receptor, showed cell lines harbouring this amplification to be particularly sensitive to inhibition of this signalling pathway (Reis-Filho et al. (2006), Clin Cancer Res. 12(22), 6652-6662).
Alternatively, a biological sample taken from a patient may be analysed for loss of a negative regulator or suppressor of FGFR, VEGFR or PDGFR. In the present context, the term “loss” embraces the deletion of a gene encoding the regulator or suppressor, the truncation of the gene (for example by mutation), the truncation of the transcribed product of the gene, or the inactivation of the transcribed product (e.g. by point mutation) or sequestration by another gene product.
The term up-regulation includes elevated expression or over-expression, including gene amplification (i.e. multiple gene copies) and increased expression by a transcriptional effect, and hyperactivity and activation, including activation by mutations. Thus, the patient may be subjected to a diagnostic test to detect a marker characteristic of up-regulation of FGFR, VEGFR and for PDGFR. The term diagnosis includes screening. By marker we include genetic markers including, for example, the measurement of DNA composition to identify mutations of FGFR, VEGFR and for PDGFR. The term marker also includes markers which are characteristic of up regulation of FGFR, VEGFR and for PDGFR, including enzyme activity, enzyme levels, enzyme state (e.g. phosphorylated or not) and mRNA levels of the aforementioned proteins.
The diagnostic tests and screens are typically conducted on a biological sample selected from tumour biopsy samples, blood samples (isolation and enrichment of shed tumour cells), stool biopsies, sputum, chromosome analysis, pleural fluid, peritoneal fluid, buccal spears, biopsy or urine.
Methods of identification and analysis of mutations and up-regulation of proteins are known to a person skilled in the art. Screening methods could include, but are not limited to, standard methods such as reverse-transcriptase polymerase chain reaction (RT-PCR) or in-situ hybridization such as fluorescence in situ hybridization (FISH).
Identification of an individual carrying a mutation in FGFR, VEGFR and for PDGFR may mean that the patient would be particularly suitable for treatment with a FGFR, VEGFR and for PDGFR inhibitor. Tumours may preferentially be screened for presence of a FGFR, VEGFR and for PDGFR variant prior to treatment. The screening process will typically involve direct sequencing, oligonucleotide microarray analysis, or a mutant specific antibody. In addition, diagnosis of tumours with such mutations could be performed using techniques known to a person skilled in the art and as described herein such as RT-PCR and FISH.
In addition, mutant forms of, for example FGFR or VEGFR2, can be identified by direct sequencing of, for example, tumour biopsies using PCR and methods to sequence PCR products directly as hereinbefore described. The skilled artisan will recognize that all such well-known techniques for detection of the over expression, activation or mutations of the aforementioned proteins could be applicable in the present case.
In screening by RT-PCR, the level of mRNA in the tumour is assessed by creating a cDNA copy of the mRNA followed by amplification of the cDNA by PCR. Methods of PCR amplification, the selection of primers, and conditions for amplification, are known to a person skilled in the art. Nucleic acid manipulations and PCR are carried out by standard methods, as described for example in Ausubel, F. M. et al., eds. (2004) Current Protocols in Molecular Biology, John Wiley & Sons Inc., or Innis, M. A. et al., eds. (1990) PCR Protocols: a guide to methods and applications, Academic Press, San Diego. Reactions and manipulations involving nucleic acid techniques are also described in Sambrook et al., (2001), 3rd Ed, Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press. Alternatively a commercially available kit for RT-PCR (for example Roche Molecular Biochemicals) may be used, or methodology as set forth in U.S. Pat. Nos. 4,666,828; 4,683,202; 4,801,531; 5,192,659, 5,272,057, 5,882,864, and 6,218,529 and incorporated herein by reference.
An example of an in-situ hybridisation technique for assessing mRNA expression would be fluorescence in-situ hybridisation (FISH) (see Angerer (1987) Meth. Enzymol., 152: 649).
Generally, in situ hybridization comprises the following major steps: (1) fixation of tissue to be analyzed; (2) prehybridization treatment of the sample to increase accessibility of target nucleic acid, and to reduce nonspecific binding; (3) hybridization of the mixture of nucleic acids to the nucleic acid in the biological structure or tissue; (4) post-hybridization washes to remove nucleic acid fragments not bound in the hybridization, and (5) detection of the hybridized nucleic acid fragments. The probes used in such applications are typically labelled, for example, with radioisotopes or fluorescent reporters. Preferred probes are sufficiently long, for example, from about 50, 100, or 200 nucleotides to about 1000 or more nucleotides, to enable specific hybridization with the target nucleic acid(s) under stringent conditions. Standard methods for carrying out FISH are described in Ausubel, F. M. et al., eds. (2004) Current Protocols in Molecular Biology, John Wiley & Sons Inc and Fluorescence In Situ Hybridization: Technical Overview by John M. S. Bartlett in Molecular Diagnosis of Cancer, Methods and Protocols, 2nd ed.; ISBN: 1-59259-760-2; March 2004, pps. 077-088; Series: Methods in Molecular Medicine.
Methods for gene expression profiling are described by (DePrimo et al. (2003), BMC Cancer, 3:3). Briefly, the protocol is as follows: double-stranded cDNA is synthesized from total RNA Using a (dT)24 oligomer for priming first-strand cDNA synthesis, followed by second strand cDNA synthesis with random hexamer primers. The double-stranded cDNA is used as a template for in vitro transcription of cRNA using biotinylated ribonucleotides. cRNA is chemically fragmented according to protocols described by Affymetrix (Santa Clara, Calif., USA), and then hybridized overnight on Human Genome Arrays.
Alternatively, the protein products expressed from the mRNAs may be assayed by immunohistochemistry of tumour samples, solid phase immunoassay with microtitre plates, Western blotting, 2-dimensional SDS-polyacrylamide gel electrophoresis, ELISA, flow cytometry and other methods known in the art for detection of specific proteins. Detection methods would include the use of site specific antibodies. The skilled person will recognize that all such well-known techniques for detection of upregulation of FGFR, VEGFR and/or PDGFR, or detection of FGFR, VEGFR and/or PDGFR variants or mutants could be applicable in the present case.
Abnormal levels of proteins such as FGFR or VEGFR can be measured using standard enzyme assays, for example, those assays described herein. Activation or overexpression could also be detected in a tissue sample, for example, a tumour tissue. By measuring the tyrosine kinase activity with an assay such as that from Chemicon International. The tyrosine kinase of interest would be immunoprecipitated from the sample lysate and its activity measured.
Alternative methods for the measurement of the over expression or activation of FGFR or VEGFR including the isoforms thereof, include the measurement of microvessel density. This can for example be measured using methods described by Orre and Rogers (Int J Cancer (1999), 84(2) 101-8). Assay methods also include the use of markers, for example, in the case of VEGFR these include CD31, CD34 and CD105 (Mineo et al. (2004) J Clin Pathol. 57(6), 591-7).
Therefore all of these techniques could also be used to identify tumours particularly suitable for treatment with the compounds of the invention.
The compounds of the invention are particular useful in treatment of a patient having a mutated FGFR. The G697C mutation in FGFR3 is observed in 62% of oral squamous cell carcmonas and causes constitutive activation of the kinase activity. Activating mutations of FGFR3 have also been identified in bladder carcinoma cases. These mutations were of 6 kinds with varying degrees of prevelence: R248C, S249C, G372C, S373C, Y375C, K652Q. In addition, a Gly388Arg polymorphism in FGFR4 has been found to be associated with increased incidence and aggressiveness of prostate, colon, lung and breast cancer.
Therefore in a further aspect of the invention includes use of a compound according to the invention for the manufacture of a medicament for the treatment or prophylaxis of a disease state or condition in a patient who has been screened and has been determined as suffering from, or being at risk of suffering from, a disease or condition which would be susceptible to treatment with a compound having activity against FGFR.
Particular mutations a patient is screened for include G697C, R248C, S249C, G372C, S373C, Y375C, K652Q mutations in FGFR3 and Gly388Arg polymorphism in FGFR4.
In another aspect of the inventions includes a compound of the invention for use in the prophylaxis or treatment of cancer in a patient selected from a sub-population possessing a variant of the FGFR gene (for example G697C mutation in FGFR3 and Gly388Arg polymorphism in FGFR4).
MRI determination of vessel normalization (e.g. using MRI gradient echo, spin echo, and contrast enhancement to measure blood volume, relative vessel size, and vascular permeability) in combination with circulating biomarkers (circulating progenitor cells (CPCs), CECs, SDF1, and FGF2) may also be used to identify VEGFR2-resistant tumours for treatment with a compound of the invention.
EXPERIMENTAL
The following examples illustrate the present invention but are examples only and are not intended to limit the scope of the claims in any way.
Analytical LC-MS System and Method Description
In the examples, the compounds prepared were characterised by liquid chromatography and mass spectroscopy using commercially available systems (Waters Platform LC-MS system, Waters Fractionlynx LC-MS system), standard operating conditions and commercially available columns (Phenomenex, Waters etc) but a person skilled in the art will appreciate that alternative systems and methods could be used. Where atoms with different isotopes are present and a single mass quoted, the mass quoted for the compound is the monoisotopic mass (i.e. 35CI; 79Br etc.).
Mass Directed Purification LC-MS System
Preparative LC-MS (or HPLC) is a standard and effective method used for the purification of small organic molecules such as the compounds described herein. The methods for the liquid chromatography (LC) and mass spectrometry (MS) can be varied to provide better separation of the crude materials and improved detection of the samples by MS. Optimisation of the preparative gradient LC method will involve varying columns, volatile eluents and modifiers, and gradients. Methods are well known in the art for optimising preparative LC-MS methods and then using them to purify compounds. Such methods are described in Rosentreter U, Huber U.; Optimal fraction collecting in preparative LC/MS; J Comb Chem.; 2004; 6(2), 159-64 and Leister W, Strauss K, Wisnoski D, Zhao Z, Lindsley C., Development of a custom high-throughput preparative liquid chromatography/mass spectrometer platform for the preparative purification and analytical analysis of compound libraries; J Comb Chem.; 2003; 5(3); 322-9.
Two such systems for purifying compounds via preparative LC-MS are the Waters Fractionlynx system or the Agilent 1100 LC-MS preparative system although a person skilled in the art will appreciate that alternative systems and methods could be used. In particular, reverse phase methods were used for preparative HPLC for the compounds described herein, but normal phase preparative LC based methods might be used in place of the reverse phase methods. Most preparative LC-MS systems utilise reverse phase LC and volatile acidic modifiers, since the approach is very effective for the purification of small molecules and because the eluents are compatible with positive ion electrospray mass spectrometry. According to the analytical trace obtained the most appropriate preparative chromatography type is chosen. A typical routine is to run an analytical LC-MS using the type of chromatography (low or high pH) most suited for compound structure. Once the analytical trace showed good chromatography a suitable preparative method of the same type is chosen. A range of chromatographic solutions e.g. normal or reverse phase LC; acidic, basic, polar, or lipophilic buffered mobile phase; basic modifiers could be used to purify the compounds. From the information provided someone skilled in the art could purify the compounds described herein by preparative LC-MS.
All compounds were usually dissolved in 100% MeOH or 100% DMSO.
General Synthetic Routes
General Route A




Procedure A1
7-Chloro-imidazol[1,2-a]pyridine




To a solution of 4-Chloro-pyridin-2-ylamine (12.8 g, 100 mmol, 1.0 equiv) in EtOH (170 ml) was added NaHCO3 (16.8 g, 200 mmol, 2.0 equiv) followed by chloroacetaldehyde (19.0 ml, 150 mmol, 1.5 equiv). The mixture was refluxed for 6 h. Solvents removed under reduced pressure and the crude mixture was partitioned between water and EtOAc. The organic layer was washed with brine, dried (MgSO4), filtered and concentrated under reduced pressure. The product was purified by column chromatography (SiO2, eluted with 50% EtOAC-petrol) to afford 13.2 g of product. MS: [M+H]+=153.
Procedure A2
7-Chloro-3-iodoimidazo[1,2-a]pyridine




To a solution of 7-Chloro-imidazo[1,2-a]pyridine (30.9 g, 186 mmol, 1.0 equiv) in DMF (280 ml) was added N-iodosuccinimide (43.6 g, 194 mmol, 1.05 equiv) and the resulting mixture was stirred overnight at RT. The thin brown slurry was diluted with water (840 ml), brine (280 ml) and extracted with EtOAc (560 ml). The aqueous layer was further extracted with EtOAc (3×280 ml). The combined organic phases were washed with water (2×280 ml), 10% w/v sodium thiosulfate (280 ml), brine (280 ml), dried (MgSO4), filtered and concentrated in vacuo to give a brown residue. The residue was triturated with ether (200 ml), filtered and the solid was washed with ether (2×50 ml) and dried on the filter to give 39 g of product. MS: [M+H]+=279.
Procedure A3
1-[3-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea
Step 1: 1-(3-Bromo-phenyl)-3-(2,2,2-trifluoro-ethyl)urea




3-Bromophenyl isocyanate (1.0 ml, 8.1 mmol) was added slowly to a stirred solution of 2,2,2-trifluoroethyl amine (3.2 ml, 40 mmol) in THF (10 ml) at 0° C. under N2. After 1 hour the reaction was allowed to warm to RT and kept at this temperature for 16 hours. The volatiles were removed in vacuo to give the title compound (2.5 g, solid). 1H NMR (400 MHz, DMSO-d6): 9.00 (1H, s), 7.86 (1H, t), 7.33 (1H, ddd), 7.26 (1H, t), 7.18 (1H, ddd), 6.89 (1H, t), 4.03-3.92 (2H, m).
Step 2: 1-[3-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea




A mixture of 1-(3-bromo-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea (2.1 g, 7.1 mmol), bis(pinacolato)diboron (3.6 g, 14 mmol) and KOAc (2.1 g, 21 mmol) in dry DMSO (7 ml) was deoxygenated by evacuation/refill with N2 (×3). PdCl2ddpf (512 mg, 0.7 mmol) was added and the mixture was deoxygenated again (×2) then stirred and heated at 100° C. under N2 for 3 hours. The reaction was allowed to cool to RT and then left to stand at this temperature for 18 hours. The mixture was partitioned between EtOAc/H2O then filtered through Celite®. The layers were separated and the aqueous layer was extracted with EtOAc (×1). The combined organic extracts were washed with water (×1), brine (×1), then dried (MgSO4), filtered and evaporated. The residue was triturated with petrol to give the title compound (2.6 g, solid). 1H NMR (400 MHz, CDCl3): 7.65 (1H, s), 7.60 (1H, d), 7.49 (1H, d), 7.37 (1H, t), 6.64 (1H, brs), 5.20 (1H, brs), 3.99-3.86 (2H, m), 1.35 (12H, s).
Procedure A4
1-[3-(7-Chloroimidazo[1,2-a]pyridin-3-yl)phenyl]-3-(2,2,2-trifluoroethyl)urea:




To a solution of 7-Chloro-3-iodo-imidazo[1,2-a]pyridine (15.17 g, 54.5 mmol) in 1,4-dioxane (260 ml) was added 1-[3-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea (22.5 g, 65.4 mmol) and aqueous K3PO4 (23.1 g in 65 ml H2O, 109 mmol) [reaction degassed by bubbling N2 through] followed by 1,1′-bis(diphenylphosphino)ferrocene palladium (II) chloride (1.99 g, 2.72 mmol). The mixture was heated at 80° C. overnight, then diluted with water and extracted with EtOAc. The organic layer was washed with brine, dried (MgSO4), filtered and concentrated under reduced pressure. The residue was triturated with DCM (100 ml), filtered and the filtercake washed with 1:1 DCM:Petroleum ether to give the product (13.2 g) as a beige solid. MS: [M+H]+=369.
Procedure A5a
General Suzuki Coupling at the 7-Position




To a solution of 1-[3-(7-Chloroimidazo[1,2-a]pyridin-3-yl)phenyl]-3-(2,2,2-trifluoroethyl)urea (565 mg, 1.5 mmol) and 2-Methyl-2-[4-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)pyrazol-1-yl]propionic acid ethyl ester (Y1) (714 mg, 2.3 mmol) in 1,4-dioxane (9 ml) was added tris(dibenzylideneacetone)dipalladium (35 mg, 0.38 mmol), 2-dicyclohexylphosphino-2′,6′-dimethoxybiphenyl (31 mg, 0.075 mmol) and 1M K3PO4 (4.5 ml, 4.5 mmol) [reaction degassed by bubbling N2 through]. The mixture was heated using microwave radiation in a CEM discover microwave synthesizer (50W) at 120° C. for 30 min. The reaction was diluted with water and extracted with EtOAc. The organic layer was dried (MgSO4), filtered and concentrated under reduced pressure and purified by column chromatography (0-3% 2M NH3-MeOH/DCM), then triturated with MeOH to give the product as a colourless solid (40 mg). MS: [M+H]+=515.
Procedure A5b
General Suzuki Coupling at the 7-Position




1-[3-(7-Chloroimidazo[1,2-a]pyridin-3-yl)phenyl]-3-(2,2,2-trifluoroethyl)urea and 5′-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-3,4,5,6-tetrahydro-2H-[1,2′]bipyridinyl were coupled using the method described in Procedure B3b.
Procedure A5c
General Suzuki Coupling at the 7-Position




Bis(tri-tert-butylphosphine)palladium (0) (8 mg) was added to a mixture of 1-[3-(7-chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoroethyl)-urea (184 mg, 0.5 mmol), aryl boronic acid or arylboronate pinocol ester (0.6 mmol) and anhydrous potassium carbonate (345 mg, 2.5 mmol) in methanol (1 ml), ethanol (1 ml), toluene (1 ml) and water (1 ml) and the mixture was stirred and held at 100° C. for 30 minutes under the influence of microwave irradiation. Upon cooling to room temperature the mixture was filtered and the organic solvent was removed in vacuo. The residue was partitioned between ethyl acetate and water, the organic layer was separated and the solvent removed in vacuo. The residue was dissolved in methanol and applied to a Strata SCX cartridge. Elution with 2M ammonia in methanol afforded a brown oil which was triturated with dichloromethane. The solid material was collected by filtration, sucked dry under reduced pressure and recrystallized from ethyl acetate to afford the corresponding 1-[3-(7-aryl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoroethyl)-urea.
General Route B




Procedure B1
1-[3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea was prepared using the methods outlined in procedure A1 to A4.
Procedure B2
Conversion of Halide to Boronate




To a solution of 1-[3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea (10 g, 27.2 mmol) in dioxane (160 ml) was added bis(pinacolato)boron (22.8 g, 89.6 mmol), tris(dibenzylideneacetone)dipalladiumO) (3.8 g, 4.2 mmol), tricyclohexylphosphine (3.8 g, 13 mmol) and KOAc (12 g, 122.2 mmol). The reaction mixture was heated at 126° C. for 18 h before being allowed to cool and filtered through a glass microfibre filter. The filtrate was partitioned between EtOAc and H2O, the organic layer separated, dried (Na2SO4), filtered and the solvent removed in vacuo. The residue was dissolved in a mixture EtOAc (150 ml) and petrol/ether (500 ml) and stirred at room temperature for 1 h. The resulting suspension was filtered and the resulting solid triturate with a petrol/ether and a mixture of EtOAc/petrol (8:2). This afford 1-{3-[7-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifl uoro-ethyl)-urea (13.93 g) as the crude material (80% pure), which was used directly in the next step.
Procedure B3
Suzuki Coupling in the 7-Position
Procedure B3a




To a solution of 1-{3-[7-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)imidazo[1,2-a]pyridin-3-yl]phenyl}-3-(2,2,2-trifluoroethypurea (100 mg, 0.21 mmol) and 2-bromopyridine (31 mg, 0.21 mmol) in 1,4-dioxane (1.5 ml) and water (0.6 ml) was added K3PO4 (138 mg, 0.63 mmol), tris(dibenzylideneacetone)dipalladium (4 mg, 0.04 mmol) and 2-dicyclohexylphosphino-2′,6′-dimethoxybiphenyl (4 mg, 0.01 mmol) [reaction degassed by bubbling N2 through]. The mixture was heated to 80° C. for 3 h, then partitioned between water and EtOAc. The organic fraction was dried (MgSO4), filtered and concentrated in vacuo and the residue purified by preparative HPLC to give the product (17 mg). MS: [M+H]+=412.
Procedure B3b




To a solution of 1-{3-[7-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (200 mg, 0.43 mmol) in a mixture of toluene (3.6 ml), nbutanol (3.6 ml), water (0.9 ml), cesium carbonate (424 mg, 1.3 mmol), was added 2-Bromo-5-(tetrahydro-furan-2-yl)-[1,3,4]thiadiazole (×1) (250 mg, 1.08 mmol). The reaction mixture was deoxygenated and tetrakis(triphenylphosphine)palladium (0) (70 mg, 60 μmol) added. The reaction mixture was again degassed and heated at 80° C. for 2.5 h. The mixture was cooled, partitioned between EtOAc and H2O, the organic layer separated, dried (MgSO4), filtered and the solvent remove in vacuo. The crude product was purified by preparative HPLC to give the mg of product. MS: [M+H]+489.
Procedure B3c




To a mixture of 1-{3-[7-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (460 mg, 1.00 mmol), in a MW tube was added 4-(4-Bromo-pyrazol-1-yl)-piperidine-1-carboxylic acid tert-butyl ester (500 mg, 1.5 mmol), SPHOS (41 mg, 0.1 mmol) and Pd2(dba)3 (45 mg, 0.05 mmol) in dioxane (6 ml) followed by a 1M K3PO4 (3 ml) in water. The reaction mixture was heated in a CEM discover microwave synthesizer (300W) at 120° C. for 30 min. The mixture was allowed to cool, then partitioned between EtOAc /H2O, the organic layer was separated, extracted with EtOAc (×2), dried (Na2SO4), filtered and the solvent removed in vacuo. The residue was purified by silica column chromatography running a 0-3% 2M methanolic NH3/CH2Cl2 gradient. This afforded the crude product as a yellow gum (210 mg), which was used directly in the next step.
Procedure B3d




3-Chloro-6-piperidin-1-ylpyridazine (112 mg, 0.56 mmol) and 2M Na2CO3 (2.2 ml, 4.4 mmol) were added to a solution of 1-{3-[7-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (200 mg, 0.43 mmol) in DME (2.5 ml) [reaction degassed by bubbling through nitrogen], followed by tetrakis(triphenylphosphine)palladium (0) (50 mg, 0.04 mmol). The reaction was heated to 90° C. for 4 h, before being partitioned between water and EtOAc. The organic fraction was dried (MgSO4), filtered and concentrated in vacuo and the residue was purified by preparative HPLC to generate the product (50 mg). MS: [M+H]+=496.
Procedure B3e




2-Chloro-5-trifluoromethyl-[1,3,4]thiadiazole (56 mg, 0.30 mmol) and 2M Na2CO3 (2.1 ml, 4.2 mmol) were added to a solution of 1-{3-[7-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (139 mg, 0.30 mmol) in DME (5 ml) [reaction degassed by bubbling through nitrogen], 2-(Dimethylamino)ferrocen-1-yl-palladium(II) chloride dinorbornylphosphine complex (17 mg, 0.03 mmol) was added and the resulting solution was heated to 80° C. overnight. The reaction was partitioned between water and EtOAc. The organic fraction was washed with water, dried (MgSO4), filtered and concentrated in vacuo. The residue was purified by preparative HPLC to give the product (12 mg). MS: [M+H]+=487.
General Route C




Procedure C1
1-[3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)urea was prepared using the methods outlined in procedure A1 to A4.
Procedure C2
Sonagashira Reaction




A solution of 1-[3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea (107 mg, 0.3 mmol) in DMSO (3 ml) was added to 3-ethynylpyridine (103 mg, 0.3 mmol), Cs2CO3 (104 mg, 0.3 mmol) and bis(tricyclohexylphosphino)palladium (II) chloride (6 mg, 0.009 mmol) and the resulting mixture was heated to 120° C. for 17 h. The reaction was filtered and partitioned between water and EtOAc. The organic fraction was washed with water, dried (MgSO4), filtered and concentrated under reduced pressure. The residue was purified by preparative HPLC to give the product (8.5 mg). MS: [M+H]+=436.
Procedure C3
Preparation of Alkyne Coupling Partner for Sonagashira Reaction




To 4-iodo-1-methyl-1H-pyrazole (1.0346 g, 4.97 mmol) in THF (20 ml) was added CuI (0.36 g, 1.89 mmol), and PdCl2(PPh3)2. The reaction flask was purged with N2 and NEt3 (10.4 mL, 75 mmol) and ethynyl-trimethyl-silane (5.27 ml, 37 mmol) was added. The reaction mixture was heated at 80° C. overnight for 21 hours. After cooling to room temperature, the reaction was diluted with EtOAc and filtered. The filtrate was washed successively with 1M HCl, 1M NaOH and H2O. The organic phase was dried over MgSO4, filtered and concentrated in vacuo. The crude product was purified by column chromatography (20:8 v/v petroleum ether:EtOAc to give the product as a brown oil (676 mg).
Procedure C4
Removal of Trimethyl Silyl Group on Alkyne Coupling Partner




To 1,2-dimethyl-5-trimethylsilanylethynyl-1H-imidazole (137 mg, 0.71 mmol) in MeOH was added K2CO3 (0.049 g, 0.36 mmol) and the reaction stirred at room temperature for 3.5 hours. The mixture was cocenentrated in vacuo and EtOAc and brine added. The phases were separated and the aquesous phase re-extracted with EtOAc (×2). The combined organic phase was dried over MgSO4, filtered and concentrated in vacuo to give yellow solids (87.3 mg). The product was used crude in the subsequent Sonagashira step.
General Route D




Procedure D1
Boronate Formation




To a solution of 7-chloroimidazo-[1,2,a]pyridine (10 g, 65.5 mmol) and bis(pinocolato)diboron (20 g, 78.7 mmol) in diglyme (100 ml) were added K2CO3 (13.5 g, 97.7 mmol), palladium (II) acetate (730 mg, 3.25 mmol), tricyclohexylphosphine (1.8 g, 6.42 mmol) and water (0.14 ml). The resulting mixture was heated at 100° C. overnight under an inert atmosphere, diluted with water (50 ml) and stirred for 1 h at room temperature. The precipitate was separated by filtration, washed with diglyme/water (2/1, ml) and water (20 ml) then dried to generate the product (7.58 g) as a grey powder.
MS: [M+H]+=246.
Procedure D2
Suzuki Coupling




Method as described in General Route B Procedure B3b
Procedure D3
Iodination




Method as described in General Route A Procedure A2.
Procedure D4
1-[5-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-pyridin-3-yl]-3-(2,2,2-trifluoro-ethyl)-urea




To 1-(5-bromo-pyridin-3-yl)-3-(2,2,2-trifluoro-ethyl)urea (0.51 g, 1.72 mmol) in anhydrous DMSO (3 mL) was added bis(pinacolato)diboron (0.88 g, 3.45 mmol). The reaction flask was purged with N2 and PdCl2dppf (40 mg, 0.05 mmol) added. The flask was further purged with N2 and the reaction then heated at 100° C. for 22 hours. After cooling to room temperature, H2O (30 mL) and EtOAc (30 mL) were added and the two phases separated. The organic phase was further washed with H2O (2×35 mL). The organic phase was dried over MgSO4, filtered and concentrated in vacuo and used crude in the subsequent reaction.
Procedure D5
Suzuki Coupling




3-Iodo-7-(6-methylpyridazine-3-yl)imidazo-[1,2,a]pyridine (70 mg, 0.21 mmol), 1-[5-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-pyridin-3-yl]-3-(2,2,2-trifluoro-ethyl)-urea (73 mg, 0.25 mmol), K3PO4 (140 mg, 0.66 mmol) and tetrakis(triphenylphosphine)palladium (0) (12 mg, 0.01 mmol) were dissolved in DME (2 ml) and water (2 ml) [reaction degassed by bubbling N2 through]. The resulting mixture was heated to 80° C. overnight, then allowed to cool. DCM and MeOH were added and the resulting suspension was filtered. The liquor was concentrated under reduced pressure and the residue purified by column chromatography (0-25% MeOH/DCM) to give the product (35 mg) as a yellow solid. MS:
[M+H]+=428.
General Route E




Procedure E1—Suzuki Coupling




7-Chloro-3-iodoimidazo-[1,2,a]pyridine was coupled with 3-nitrophenyl boronic acid using the method described in Procedure B3b to synthesise 7-Chloro-3-(3-nitro-phenyl)-1,7-imidazo[1,2-a]pyridine. MS: [M+H]+=274.
1H NMR (400 MHz, DMSO-d6): 8.68 (1H, d), 8.47 (1H, t), 8.28 (1H, dd), 8.15 (1H, d), 7.99 (1H, s), 7.89 (1H, d), 7.84 (1H, t), 7.09 (1H, dd)
Procedure E2
Nitro Reduction




To a solution of 7-chloro-3-(3-nitrophenyl)imidazo-[1,2,a]pyridine (0.5 g, 1.83 mmol) in dioxane (10 ml) and water (2 ml) was added iron powder (0.97 g, 18.3 mmol) and iron sulphate heptahydrate (2.05 g, 7.31 mmol). The resulting solution was heated to reflux for 3 h, cooled, filtered through celite and concentrated under reduced pressure. The residue was partitioned between DCM and brine and the organic fraction was dried (Na2SO4), filtered and concentrated in vacuo to give the product (400 mg), which was used without further purification. MS: [M+H]+=244.
Procedure E3
Carbamate Formation




A solution of 7-chloro-3-(3-aminophenyl)imidazo-[1,2,a]pyridine (400 mg, 1.64 mmol) and 4-nitrophenyl chloroformate (330 mg, 1.64 mg) in THF (20 ml) was heated to 60° C. for 2 h, then stirred at room temperature overnight. The resulting precipitate was separated by filtration, washed with THF and dried to give the product (585 mg), which was used without further purification. MS: [M+H]+=409.
Procedure E4
Urea Formation




To a solution of [3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-carbamic acid 4-nitro-phenyl ester (200 mg, 0.49 ml) in THF (10 ml) was added cyclopropylamine (0.04 ml, 0.54 mmol) and triethylamine ((0.08 ml, 0.54 ml) and the resulting mixture was stirred at room temperature overnight. The reaction was diluted with DCM and 2M NaOH and the layers separated. The organic fraction was dried (Na2SO4), filtered and concentrated under reduced pressure. The residue was purified by column chromatography (0-100% EtOAc/Petrol) to give the product (115 mg). MS: [M+H]+=327.
Procedure E5
Suzuki Coupling




1-[3-(7-Chloroimidazo[1,2-a]pyridin-3-yl)-phenyl]-3-cyclopropylurea was reacted with 4-fluorophenyl boronic acid using the method described in Procedure B3c. MS: [M+H]+=387.
General Route F




Procedure F1
Suzuki Coupling




7-Chloroimidazo-[1,2,a]pyridine was coupled with 4-fluorophenylboronic acid according to the method in Procedure B3d.
Procedure F2
Iodination




Iodination was performed according to the method in Procedure A2
Procedure G
Reduction of Alkynes to Alkanes
1-(3-{7-[2-(3-Methyl-3H-imidazol-4-yl)-ethyl]-imidazol[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




To an evacuated flask back-filled with N2 containing 1-{3-[7-(3-methyl-3H-imidazol-4-ylethynyl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (65.7 mg, 0.15 mmol) in MeOH was added Pd (10 wt % on activated carbon) (25.5 mg). The flask was filled with H2 and the reaction stirred for a total of 7.5 hours. The reaction was filtered and the filtrate concentrated in vacuo. The crude product was purified by preparative HPLC to give pure product (6.1 mg). MS: [M+H]+443.
General Route H




Procedure H1




Imidazo[1,2-a]pyridin-7-yl-methanol was prepared as Procedure A1 using (2-Amino-pyridin-4-yl)-methanol. MS: [M+H]+419
Procedure H2




To imidazo[1,2-a]pyridin-7-yl-methanol (100 mg, 0.7 mmol) suspended in chloroform (5 ml) at room temperature was added 1,1,1-tris(acetyloxy)-1,1-dihydro-1,2-benziodoxol-3-(1H)-one (Dess-Martin periodinane, 0.373 g, 0.9 mmol, 1.3 equiv). This mixture was stirred at room temperature overnight and then dilute sodium hydroxide solution was added and the mixture was stirred for 60 minutes. The mixture was then extracted with dichloromethane and the organic liquors were concentrated in vacuo to furnish imidazo[1,2-a]pyridine-7-carbaldehyde (90 mg) as a white solid. 1H NMR (400 MHz, DMSO-d6): 10.00 (1H, s), 8.67 (1H, d), 8.33 (1H, s), 8.20 (1H, s), 7.86 (1H, d), 7.25 (1H, dd).
Procedure H3




A mixture of 2-chloromethyl-1-methyl-1H-imidazole (200 mg, 1.5 mmol) and triphenylphosphine (402 mg, 1.0 mmol, 1 equiv) in acetonitrile (5 ml) was heated to 80 deg C. overnight. The reaction was then allowed to cool to room temperature and the solid was isolated by vacuum filtration to afford 2-triphenylphosphonium-1-methyl-1H-imidazole chloride (458 mg) as a white solid. MS: [M+H]+357
Procedure H4




To a stirred solution of 2-triphenylphosphonium-1-methyl-1H-imidazole chloride (656 mg, 1.6 mmol, 1 equiv) in tetrahydrofuran (5 ml) at room temperature was added dropwise a solution of potassium tert-butoxide in tetrahydrofuran (1M, 3.3 ml, 3.3 mmol, 2 equiv). This brightly orange mixture was stirred thus for 2 hours and then a solution of imidazo[1,2-a]pyridine-7-carbaldehyde (245 mg, 1.7 mmol, 1 equiv) in tetrahydrofuran (8 ml) was added and the lightly coloured mixture was stirred at room temperature overnight. To the reaction was added water and the mixture was extracted with ethyl acetate. The organic liquors were washed with water and brine and then dried (MgSO4) and concentrated in vacuo. The residue was purified by column chromatography (0-20% methanol/ethyl acetate) furnishing 7-[(E)-2-(1-methyl-1H-imidazol-2-yl)-vinyl]-imidazo[1,2-a]pyridine (87 mg). MS:
[M+H]+225
Procedure H5




7-[(E)-2-(1-methyl-1H-imidazol-2-yl)-vinyl]imidazo[1,2-a]pyridine was iodinated as Procedure A2 to furnish the desired iodide as a yellow solid. MS: [M+H]+351
Procedure H6




1-(3-{7-[(E)-2-(1-Methyl-1H-imidazol-2-yl)-vinyl]imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea (86 mg) was prepared according to Procedure B3d using 3-Iodo-7-[(E)-2-(1-methyl-1H-imidazol-2-yl)-vinyl]imidazo[1,2-a]pyridine (170 mg, 0.49 mmol) and 1-[3-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea. 1H NMR (400 MHz, Me-d3-OD): 8.74 (1H, d), 8.01 (3H, d), 7.77-7.66 (2H, m), 7.64-7.50 (4H, m), 7.45-7.32 (2H, m), 4.04 (3H, s), 4.01-3.89 (2H, m). MS: [M+H]+441
Procedure G
Synthesis of Additional Monomers
Synthesis of (E)-3-Imidazo[1,2-a]pyridin-7-yl-prop-2-en-1-ol




(E)-3-Imidazo[1,2-a]pyridin-7-yl-acrylic acid ethyl ester (prepared according to Procedure H1 to H4 using triethylphosphono acetate, 519 mg, 2.4 mmol) was dissolved in a mixture of toluene/dichloromethane (1:1, 12 ml) and cooled on a dry ice/acetone bath. Diisobutylaluminium hydride (1 M in toluene, 3 ml) was added dropwise. After 45 minutes the reaction was transferred to a salt/ice bath and further portions of DIBAL were added until the reaction was complete. The reaction was quenched by the cautious addition of methanol and was allowed to warm to room temperature. The reaction was concentrated in vacuo and 2N sodium hydroxide solution was added. This was extracted twice with dichloromethane and the combined liquors were dried and concentrated to furnish the desired monomer (327 mg) as a yellow solid MS: [M+H]+=175
Section X
Preparation of Haloaromatic Coupling Partners
X1
Preparation of 2-Bromo-5-(tetrahydro-furan-2-yl)-[1,3,4]thiadiazole




To 5-(Tetrahydro-furan-2-yl)-[1,3,4]thiadiazol-2-ylamine (0.5 g, 2.9 mmol) was added 48% HBr (7 ml) and H2O (7 ml). The reaction mixture was cooled to 0° C. using an icebath. Cu(I)Br (0.42 g, 2.9 mmol) was added, followed by a the dropwise addition of solution of NaNO2 (0.48 g, 10 mmol) in H2O (18 ml). The reaction mixture was stirred for a further 10 mins at 0° C. then allowed to warm up to room temperature over a 35 min period. A solution of saturated bicarbonated was added to the reaction mixture until the pH=6, then extracted with EtOAc, dried (MgSO4), filtered and the solvent removed in vacuo to afford the product (0.5 g, 2.1 mmol). MS: [M+H]+235, 237.
X2
Preparation of 4-(4-Bromo-pyrazol-1-yl)-piperidine-1-carboxylic acid tert-butyl ester




Sodium hydride (400 mg, 60% dispersion, 10 mmol) was added to a stirred solution of the bromopyrazole (1.47 g, 10 mmol) and 4-Methanesulfonyloxy-piperidine-1-carboxylic acid tert-butyl ester (2.4 g, 8.6 mmol) in dry DMF (10 ml) at room temperature. After gas evolution had ceased, the reaction was stirred and heated at 110° C. under N2 for 4 h. The reaction mixture was allowed to cool to room temperature and stand at for 18 h before being partitioned between EtOAc and H2O. The organic layer was separated, washed with water H2O (×2), brine (×1), then dried (Na2SO4), filtered and the solvent removed in vacuo. The residue was purified using silica column chromatography running a 10-25% EtOAc/petrol gradient to give a colourless oil (1.7 g, 5.15 mmol). 1H NMR (400 MHz, CDCl3): 7.48 (1H, s), 7.45 (1H, s), 4.45-4.07 (3H, m), 2.90 (2H, t), 2.12 (2H, d), 1.97-1.79 (2H, m), 1.50 (9H, s).
X3
Preparation of 4-(4-Bromo-pyrazol-1-yl)-1-methyl-piperidine
Step 1:




Prepared using procedure X2.
Step 2:




To a stirred solution of 4-(4-Bromo-pyrazol-1-yl)-piperidine-1-carboxylic acid tert-butyl ester (1.2 g, 3.6 mmol) in CH2Cl2 (4 ml) was added TFA (2 ml) and the reaction mixture stirred at room temperature for 2 h. The volatiles were removed in vacuo and the residue partitioned between CH2Cl2/NaHCO3(aq). The aqueous layer was extracted with CH2Cl2 (×3), and the organic fractions combined, dried (using a phase separating cartridge) and the solvent removed in vacuo to give a solid. (0.49 g). 1H NMR (400 MHz, CDCl3): 7.48 (1H, s), 7.46 (1H, s), 4.29-4.15 (1H, m), 3.27 (2H, d), 2.99-2.75 (2H, m), 2.16 (2H, d), 2.05-1.81 (2H, m).
Step 3:




To a solution of 4-(4-bromopyrazol-1-yl)piperidine (480 mg, 2.09 mmol) and triethylamine (0.295 ml, 2.1 mmol) in DMF (4 ml) was added methyl iodide (2.1 ml of a 1.0M solution in DMF, 2.1 mmol) under an inert atmosphere. The reaction was stirred at room temperature overnight, then partitioned between water and EtOAc. The organic layer was washed with brine, dried over MgSO4, filtered and concentrated under reduced pressure to give the product (260 mg), which was used without further purification. 1H NMR (400 MHz, CDCl3): 7.47 (1H, s), 7.45 (1H, s), 4.16-4.04 (1H, m), 3.09-2.92 (2H, m), 2.34 (3H, s), 2.30-2.10 (4H, m), 2.10-1.96 (2H, m).
X4
Preparation of 2-Chloro-5,6-dihydro-4H-cyclopentathiazole




2-Amino-5,6-dihydro-4H-cyclopentathiazole (230 mg, 1.64 mmol) was added to a solution of cupric chloride (260 mg, 1.97 mmol) and tert-butylnitrite (0.3 ml, 2.46 mmol) in MeCN (0.5 ml) and the resulting mixture was stirred for 2 h at room temperature, then at 65° C. for 1 h. The reaction was filtered and the filtrate partitioned between water and EtOAc. The organic fraction was dried (MgSO4), filtered and concentrated under reduced pressure to give the chloride (140 mg), which was used without further purification. MS:
[M+H]+=160.
X5
Preparation of 1-[2-(5-Bromo-[1,3,4]thiadiazol-2-yl)ethyl]piperidine




Prepared using the method described in procedure X1
X6
Preparation of 4-Bromo-1-(1-methylpiperidin-3-yl)-1H-pyrazole




DIAD (3.21 ml, 16.3 ml) was added dropwise to a solution of 4-bromopyrazole (2.0 g, 13.6 mmol), 3-hydroxy-1-methylpiperidine (1.57 ml, 13.6 ml) and triphenylphosphine (4.3 g, 16.3 mmol) in THF (50 ml) at 0° C. The mixture was allowed to warm to room temperature and stirred overnight. The reaction was partitioned between water and ethyl acetate and the organic layers were extracted into 2N HCl. The aqueous fraction was basified with sodium bicarbonate and extracted into ethyl acetate. The organic fractions were dried (MgSO4), filtered and concentrated under reduced pressure to give the product (1.64 g), which was used without purification. MS: [M+H]+=244.
X7
Preparation of 4-Bromo-1-(1-tert-butoxycarbonylpiperidin-3-yl)-1H-pyrazole




DIAD (1.18 ml, 6.0 ml) was added dropwise to a solution of 4-bromopyrazole (0.74 g, 5.0 mmol), 3-hydroxy-1-tert-butoxycarbonylpiperidine (1.00 g, 5.0 mmol) and triphenylphosphine (1.57 g, 6.0 mmol) in THF (50 ml) at 0° C. The mixture was allowed to warm to room temperature and stirred overnight. The reaction was partitioned between water and ethyl acetate. The organic fractions were washed with water and brine, dried (MgSO4), filtered and concentrated under reduced pressure. The residue was purified by column chromatography (50% EtOAc/Petrol) to give the product (1.46 g). MS: [M+H]+=332.
X8
Preparation of 4-Bromo-1-(1-ethylpyrrolidin-3-yl)-1H-pyrazole




Prepared as described in X3, using N-tert-butoxycarbonylpyrrolidine-3-methanesulfonate in step 1 and ethyl iodide in step 3.
X9
Preparation of 4-Bromo-1-(1-tert-butoxycarbonylpyrrolidin-3-yl)-1H-pyrazole




Prepared as described in X3, using N-tert-butoxycarbonylpyrrolidine-3-methanesulfonate in step 1 and missing out step 3.
X10
Preparation of 4-Bromo-1-(tetrahydrofuran-3-yl)-1H-pyrazole
Step 1:




To a solution of 3-hydroxytetrahydrofuran (1.83 ml, 23 mmol) in DCM (35 ml) at 0° C. was added triethylamine (5.06 ml, 36 mmol) followed by methanesulfonyl chloride (2.64 ml, 34 mmol). The reaction was allowed to warm to room temperature and stirred for 3 h. DCM (30 ml) and water (30 ml) were added. The layers were separated and the aqueous fraction was further extracted with DCM. The combined organic fractions were dried (MgSO4), filtered and concentrated in vacuo to give the product (4.54 g) as a pale yellow oil, which was used without further purification.
Step 2:




Prepared using the method described in X3 Step 1.
X11
Preparation of 4-Bromo-1-(1-isopropylpiperidin-4-yl)-1H-pyrazole




Prepared as described in X3, using 2-iodopropane in Step 3.
X12
Preparation of 1-[4-(4-Bromo-pyrazol-1-yl)-piperidin-1-yl]-ethanone




To a solution of 4-(4-bromopyrazol-1-yl)piperidine hydrochloride (300 mg, 1.13 mmol) in pyridine (3 ml) was added acetic anhydride (0.107 ml, 1.13 mmol) under an inert atmosphere. The reaction was stirred at 40° C., until reaction complete then evaporated under reduced pressure and re-evaporated with toluene twice, then partitioned between water and EtOAc. The organic layer was washed with brine, dried over MgSO4, filtered and concentrated under reduced pressure to give the product (250 mg), which was used without further purification MS: [M+H]+=272
X13
Preparation of 4-(4-Bromo-pyrazol-1-yl)-1-methanesulfonyl-piperidine




To a solution of 4-(4-bromopyrazol-1-yl)piperidine hydrochloride (380 mg, 1.43 mmol) in CH3CN (10 ml) at 0° C. was added DIPEA (0.75 mlml, 4.3 mmol) followed by methanesulphonyl chloride (0.11 ml, 1.43 mmol), stirred at 0° C. for 1 hour then allowed to warm up to RT over 1 hour. The reaction then partitioned between water and EtOAc. The organic layer was washed with brine, dried over MgSO4, filtered and concentrated under reduced pressure to give the product (380 mg), which was used without further purification 1H NMR (400 MHz, Me-d3-OD): 7.84 (1H, s), 7.50 (1H, s), 4.40-4.27 (1H, m), 3.86 (2H, d), 3.05-2.93 (2H, m), 2.90 (3H, s), 2.25-2.01 (4H, m).
X14
2-(6-chloro-pyridin-3-yl)-ethanol




To solid (6-chloro-pyridin-3-yl)-acetic acid (172 mg, 1 mmol) was added borane in THF (1M, 5 ml) and the reaction was stirred at room temperature. After 2 hours, the reaction was heated to 50 degC for 90 minutes. Aqueous hydrochloric acid (2N, 8 ml) was added to the reaction and it was allowed to cool to room temperature. After 10 minutes the reaction was basified with saturated aqueous sodium bicarbonate and extracted into ethyl acetate. The organic liquors were washed with water (×2) and brine, dried (MgSO4) and concentrated to furnish the crude product as a yellow oil (126 mg). This material was used as such in the coupling reaction. MS: [M+H]+158.
X15
Synthesis of (2-Chloro-5-fluoro-pyrimidin-4-yl)-cyclopropyl-amine




To 2,4 dichloro-5-fluoropyridine (1 g, 6 mmol) dissolved in CH3CN (8 ml) cooled in an ice bath was added Et3N (1.16 ml, 8.4 mmol) and cyclopropylamine (0.29 ml, 8.4 mmol) in CH3CN (2 ml). Reaction stirred 0° C. for 2 hours, evaporated water added and reaction extracted with EtOAc (×3). The organic fractions were combined washed with brine, dried over MgSO4, filtered and concentrated under reduced pressure to give the product (0.92 g).
MS: [M+H]+=188
X16
Synthesis of (2-Chloro-5-fluoro-pyrimidin-4-yl)-ethyl-amine




Same procedure as X15 using ethylamine
X17
Synthesis of 2-(2-Chloro-5-fluoro-pyrimidin-4-ylamino)-ethyl-carbamic acid tert-butyl ester




Same procedure as X15 using tert-butyl N-(2-aminoethyl)carbamate
X18
Synthesis of 4-Chloro-2-methyl-6-{4-[2-(tetrahydro-pyran-2-yloxy)-ethyl]-piperazin-1-yl}-pyrimidine




To tert-butyl 4-(6-chloro-2-methyl-4-pyrimidinyl)tetrohydro-1(2H)-pyrazinecarboxylate (0.5 g, 1.6 mmol) was added saturated HCl in EtOAc, reaction stirred RT for 3 hours then evaporated, re-evaporated with toluene (2×) to give the product (0.34 g). To crude product in a mix of acetone/DMF (20 ml) was added 2-(2-bromoethoxy)tetrahydro-2H-pyran (0.4 g, 1.9 mmol) and K2CO3 (0.4 g, 2.9 mmol) and heated at 60° C. for 1 hour, little reaction therefore further pyran (0.3 g) and K2CO3 (0.4 g) added heated 0/N. The mixture was partitioned between EtOAc and H2O, the organic layer separated and washed with H2O and brine. The residue was purified by column chromatography to give the product (340 mg).
MS: [M+H]+=341.
X19
Synthesis of 2-(2-Chloro-pyrimidin-4-yl)-imidazole-1-sulfonic acid dimethylamide




N-BuLi [2.5M in hexane] (4 ml, 10 mmol) added at −78° C. to a solution of N,N-dimethyl imidazole-1-sulphonamide (1.75 g, 10 mmol) in dry ether (60 ml), stirred 1 hour, anion transferred to a suspension of 2-chloropyrimidine (1.48 g, 10 mmol) in ether (80 ml) keeping the temperature -30° C., temperature brought to 0° C. and held for 30 min. Reaction quenched with AcOH (0.64 ml) and water (0.1 ml), to the reaction was added THF (2 ml) then DDQ (2.27 g) in THF (10 ml) and stirred 0/N. Reaction diluted with EtOAc, solid filtered off and filtrate washed with water (3×) then ice cold 0.5% NaOH, organic layer dried over MgSO4, filtered and concentrated under reduced pressure, residue was purified by column chromatography to give the product (130 mg).
MS: [M+H]+=228.
X20
Synthesis of 1-[3-(4-Bromo-pyrazol-1-yl)-azetidin-1-yl]-ethanone




Prepared using procedure X10 step 2 using 1-boc-3-(hydroxy)azetidine followed by procedure X3.
To 1-Azetidin-3-yl-4-bromo-1H-pyrazole hydrochloride (0.3 g, 1.26 mmol) in CH2Cl2 (15 ml) added ET3N (0.47 ml) and acetyl chloride (0.107 ml, 1.5 mmol) stirred at RT for 2 hours then partitioned between EtOAc and H2O. The organic layer was separated, washed with water H2O, dried over MgSO4, filtered and concentrated under reduced pressure to give the product (276 mg).
MS: [M+H]+=246.
X21
Synthesis of 4-Bromo-1-{1-[2-(tetrahydro-pyran-2-yloxy)-ethyl]-azetidin-3-yl}-1H-Pyrazole




Prepared using procedure X10 step 2 using 1-boc-3-(hydroxy)azetidine followed by procedure X3.
To 1-Azetidin-3-yl-4-bromo-1H-pyrazole hydrochloride (0.3 g, 1.26 mmol) in CH3CN (15 ml) added K2CO3(0.78 g, 5.6 mmol) followed by 2-(2-bromoethoxy)tetrahydro-2H-pyran (0.205 ml, 1.5 mmol) reaction heated at reflux 0/N. Reaction mixture filtered, solid washed with EtOAc, filtrate concentrated under reduced pressure, residue partitioned between CH2Cl2 and H2O. The organic layer was separated, dried over MgSO4, filtered and concentrated under reduced pressure to give the product (380 mg).
MS: [M+H]+=331
X22
Synthesis of [2-(6-chloro-pyrimidin-4-ylamino)-ethyl]-carbamic acid tert-butyl ester




To 4,6-dichloropyrimidine (0.533 g, 35.8 mmol) in MeOH (15 ml) was added tert-butyl N-(2-aminoethyl)carbamate and the reaction stirred at room temperature for 6.5 hours. Reaction concentrated in vacuo, solids triturated with EtOAc/petrol. Filtrate which contains the desired product was concentrated and EtOAc and sat. NaHCO3 added.
Phases separated and organics dried over MgSO4, filtered and concentrated in vacuo. Crude purified by column chromatography to give desired product as a white solid (414 mg). MS: [M+H]+=273
X23
Synthesis of 2-Chloro-5-methoxy-pyrimidin-4-ylamine




A mixture of 2,4 dichloro-5-methoxypyrimidine (0.45 g, 2.5 mmol) and ammonia in methanol (2N, 20 ml) was stirred at room temperature overnight. The mixture was then concentrated in vacuo and washed with water. The residue was purified by column chromatography (20-60% ethyl acetate/petroleum ether) to furnish the title compound as a white solid (211 mg). MS: [M+H]+=160
X24
Synthesis of 2-Chloro-5-trifluoromethyl-pyrimidin-4-ylamine and 4-Chloro-5-trifluoromethyl-pyrimidin-2-ylamine




Synthesised as 2-chloro-5-methoxy-pyrimidin-4-ylamine using 2,4-dichloro-5-trifluoromethylpyrimidine. Both regioisomers isolated. 2-chloro-5-trifluoromethyl-pyrimidin-4-ylamine 1H NMR (400 MHz, Me-d3-OD): 8.32 (1H, s); 4-chloro-5-trifluoromethyl-pyrimidin-2-ylamine 1H NMR (400 MHz, Me-d3-OD): 8.46 (1H, s).
X25
Synthesis of (2-Chloro-5-trifluoromethyl-pyrimidin-4-yl)-cyclobutyl-amine and (4-Chloro-5-trifluoromethyl-pyrimidin-2-yl)-cyclobutyl-amine




A mixture of 2,4-dichloro-5-trifluoromethylpyrimidine (0.3 ml, 2.3 mmol) and cyclobutylamine (0.2 ml, 2.3 mmol) was stirred at room temperature overnight in methanol (5 ml). After the addition of further amine (0.4 ml) and 4 hours, the reaction was concentrated in vacuo. Ethyl acetate was added to the residue and the mixture was washed with water (×2) and brine then dried (MgSO4) and concentrated again. Purified by column chromatography (0-20% ethyl acetate/petroleum ether) furnishing 2 regioisomers as a mixture (635 mg). MS: [M+H]+=252
X26
Synthesis of [1-(2-Chloro-pyrimidin-4-yl)-azetidin-3-yl]-carbamic acid tert-butyl ester




A mixture of azetidin-3-yl-carbamic acid tert-butyl ester (635 mg, 3.4 mmol), 2,4-dichloropyrimidine (500 mg, 3.4 mmol) and triethylamine (0.5 ml, 3.6 mmol) in methanol (10 ml) was stirred at room temperature overnight. The mixture was concentrated and purified by column chromatography (0-40% ethyl acetate/petroleum ether) furnishing 561 mg title compound. MS: [M+H]+=283/285
X27
Synthesis of 4-Azetidin-1-yl-2-chloro-pyrimidine




Prepared as [1-(2-chloro-pyrimidin-4-yl)-azetidin-3-yl]-carbamic acid tert-butyl ester using azetidine hydrochloride. MS: [M+H]+=170
X28
Synthesis of 1-(2-Chloro-pyrimidin-4-yl)-azetidin-3-ol




Prepared as [1-(2-chloro-pyrimidin-4-yl)-azetidin-3-yl]-carbamic acid tert-butyl ester using azetidin-3-ol hydrochloride. MS: [M+H]+=186
X29
Synthesis of 2-Chloro-pyrimidine-4-carboxylic acid methylamide




To a solution of 2-chloro-pyrimidine-4-carboxylic acid (200 mg, 1.3 mmol) in dichloromethane (10 ml) cooled in an ice/water bath was added oxalyl chloride (0.7 ml) and dimethylformamide (3 drops). The reaction was incomplete after 45 minutes so a further portion of oxalyl chloride was added (0.7 ml) and the reaction allowed to proceed at room temperature for a further hour. The reaction was then concentrated and to the crude acid chloride was added pyridine (0.1 ml) and methylamine hydrochloride (0.16 g, 1.9 mmol). After stirring for 3 hours a further portion of both reagents were added and the reaction left to stir overnight. To the reaction was added dilute bicarbonate solution and the mixture was extracted with dichloromethane. The organic liquors were concentrated to furnish the title compound as a yellow solid (150 mg). 1H NMR (400 MHz, DMSO-d6): 9.01 (1H, d), 8.99-8.88 (1H, m), 8.01 (1H, d), 2.83 (3H, d).
X30
Synthesis of (2-Chloro-pyrimidin-4-yl)-morpholin-4-yl-methanone




Prepared as 2-chloro-pyrimidine-4-carboxylic acid methylamide. Produced as a 50% pure mixture
X31
Synthesis of (2-Chloro-pyrimidin-4-yl)-morpholin-4-yl-methanone




A mixture of 2-chloro-6-methyl-pyrimidine-4-carboxylic acid methyl ester (2.0 g, 10.7 mmol), sodium hydroxide pellets (600 mg) and water (60 ml) was stirred at room temperature for 3 hours. The reaction was then acidified with 5N hydrochloric acid and left to stand over the weekend. The reaction was cooled on ice and a brown material removed by vacuum filtration. The liquors were extracted with ethyl acetate and the combined organic liquors were concentrated to furnish the acid intermediate as a brown solid (1.59 g). 1H NMR (400 MHz, DMSO-d6): 14.13 (1H, s), 7.95 (1H, s), 2.59 (3H, s). The amide was produced according to the method for preparation of 2-chloro-pyrimidine-4-carboxylic acid methylamide. MS: [M+H]+=186
X32
Synthesis of 6-Chloro-5-trifluoromethyl-pyridin-2-ylamine and 6-Chloro-3-trifluoromethyl-pyridin-2-ylamine




A mixture of 2,6-dichloro-3-trifluoromethyl-pyridine (1.0 g, 4.6 mmol) and ammonia (saturated aqueous solution ‘0.880’, 0.6 ml) in 1,4-dioxane (4 ml) was heated in a sealed tube in a microwave. More ammonia was added and the temperature slowly increased to 120 deg C. until ca. 90% conversion achieved (after about 2 hours). The reaction was allowed to stand overnight and the resultant solid was isolated by vacuum filtration and was washed with water. The resultant solid was purified by column chromatography (0-30% ethyl acetate/petroleum ether) to furnish the 2 regioisomers. 6-Chloro-5-trifluoromethyl-pyridin-2-ylamine 1H NMR (400 MHz, CDCl3): 7.70 (1H, d), 6.43 (1H, d), 5.47-4.30 (2H, m). -6-Chloro-3-trifluoromethyl-pyridin-2-ylamine-1H NMR (400 MHz, CDCl3): 7.66 (1H, d), 6.75 (1H, d), 5.17 (2H, s).
X33
Synthesis of 4-Chloro-5-isopropyl-pyrimidin-2-ylamine and 2-Chloro-5-isopropyl-pyrimidin-4-ylamine




Prepared as 6-chloro-5-trifluoromethyl-pyridin-2-ylamine and 6-chloro-3-trifluoromethyl-pyridin-2-ylamine using 2,4-dichloro-5-isopropyl-pyrimidine as starting material. 4-Chloro-5-isopropyl-pyrimidin-2-ylamine 1H NMR (400 MHz, Me-d3-OD): 7.86 (1H, s), 2.92-2.78 (1H, m), 1.26 (6H, d). 2-Chloro-5-isopropyl-pyrimidin-4-ylamine 1H NMR (400 MHz, Me-d3-OD): 8.15 (1H, s), 3.21-3.08 (1H, m), 1.27 (6H, d).
X34
Synthesis of 2-Chloro-5-trifluoromethyl-pyrimidine




2,4-Dichloro-5-trifluoromethyl-pyrimidine (300 mg, 1.4 mmol), zinc dust (90 mg, 1.4 mmol) and tetrahydrofuran (3 ml) heated to reflux. Acetic acid (0.16 ml, 2.8 mmol) in tetrahydrofuran (3 ml) added dropwise to the mixture over 30 minutes. The resultant mixture was heated for a further 3 hours and then allowed to cool to room temperature and filtered through GF-A paper. The liquors were concentrated and wet with dichloromethane. The mixture was washed with dilute bicarbonate solution and then concentrated in vacuo furnishing a crude material from which the desired target molecule was produced.
X35
Synthesis of 2,5-dichloro-pyrimidin-4-ylamine




A solution of 2,4,5-trichloropyrimidine (2.2 ml) in 2M ammonia in methanol (50 ml) was stirred at room temperature overnight. The reaction was then concentrated in vacuo and the resultant solid was washed with water. The residue was triturated with methanol and the solid was isolated by vacuum filtration to furnish the title compound as a white solid (487 mg). 1H NMR (400 MHz, DMSO-d6): 8.18 (1H, s).
Section Y
Preparation of Boronic Acid/Ester Coupling Partners
Y1
Preparation of 2-Methyl-2-[4-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)pyrazol-1-yl]propionic acid ethyl ester




To a stirred mixture of 4-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-1H-pyrazole (5.0 g, 25.8 mmol) and Cesium carbonate (12.6 g, 38.7 mmol) in dry DMF (50 ml) was added 2-Bromo-2-methyl-propionic acid ethyl ester (5.5 g, 28.2 mmol). The reaction mixture was heated at 90° C. under N2 for 18 h, before being allowed to cool to room temperature. The mixture was partitioned between EtOAc and H2O, the organic layer separated and washed with H2O (×2) and brine (×1), dried (Na2SO4), filtered and the solvent removed in vacuo. This afforded the crude product as a yellow oil, which was used directly in the next step (4.7 g, 15.3 mmol).
Section Z
General Modifications
Procedure Z1a
Boc group removal




4N HCl (0.5 ml, 2 mmol) in dioxan was added to a stirred suspension of 4-[4-(3-{3-[3-(2,2,2-Trifluoro-ethyl)-ureido]-phenyl}-imidazo[1,2-a]pyridin-7-yl)-pyrazol-1-yl]-piperidine-1-carboxylic acid tert-butyl ester (210 mg, 0.36 mmol) in CH2Cl2 (2 ml). The suspension was stirred at room temperature for 3 h and the solvent removed in vacuo. The residue was partitioned between EtOAc and NaHCO3 solution and the aqueous layer was extracted with EtOAc (×2). The organic extracts were combined, dried (Na2SO4), filtered and the solvent removed in vacuo. The residue was purified by preparative HPLC to give a colourless solid. The solid was dissolved in a solution of HCl in MeOH (1 equiv), the solvent removed and the residue triturated with Et2O to give a cream solid (110 mg, 0.23 mmol). MS: [M+H]+484.
Procedure Z1b
Alternative Boc Group Removal
The Boc protected compound may be dissolved in DCM and treated with trifluoroacetic acid. The reaction is stirred at room temperature until complete, then all volatiles are removed in vacuo to leave the unprotected amino compound, which may be purified as necessary.
Procedure Z2
Ester Hydrolysis




To a stirred suspension of 2-Methyl-2-[4-(3-{3-[3-(2,2,2-trifluoroethypureido]phenyl}imidazo[1,2-a]pyridin-7-yl)pyrazol-1-yl]propionic acid ethyl ester (300 mg, 0.58 mmol) in dioxane (4 ml) was added a solution of LiOH (70 mg, 2.9 mmol) in H2O (1 ml). MeOH (1 ml) was added to give a homogeneous solution, which was stirred at room temperature for 3 days. 2N HCl (1.5 ml) was added and the volatiles removed in vacuo. The aqueous residue was partitioned between EtOAc and H2O. The layers were separated and the aqueous layer further extracted with EtOAc, resulting in the formation of a solid. The liquid fraction was decanted off and the solid dissolved in MeOH. The aqueous layer was further extracted with EtOAc (×1) and CH2Cl2 (×1). The organic fractions were combined, the solvent removed in vacuo and the residue azeotroped with EtOH to give a beige foam. A portion of this foam (70 mg) was purified by preparative HPLC to give a colourless solid (33 mg). MS: [M+H]+487.
Procedure Z3
Reduction




Borane-THF (1 M in THF, 3 ml, 3 mmol) was added to a suspension of 2-Methyl-2-[4-(3-{3-[3-(2,2,2-trifluoroethypureido]phenyl}imidazo[1,2-a]pyridin-7-yl)pyrazol-1-yl]propionic acid (250 mg, 1.9 mmol) in THF (3 ml) at 0° C. under a nitrogen atmosphere. The reaction was stirred at room temperature for 3 h, then at 65° C. overnight. After cooling to room temperature, water (1 ml), 5N HCl (1 ml) and MeOH (5 ml) were added and the resulting solution was stirred at room temperature for 18 h. The mixture was concentrated in vacuo and diluted with 1N NaOH and EtOAc. The mixture was filtered and the solid purified by preparative HPLC to give the product (28 mg) as an off-white solid. MS: [M+H]+=473.
Procedure Z4
Alkylation




1-{3-[7-(6-Chloropyridazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]phenyl}-3-(2,2,2-trifluoroethyl)urea (20 mg, 0.04 mmol) and 4-(dimethylamino)piperidine (8 mg, 0.05 mmol) were dissolved in NMP (0.25 ml) and heated in a CEM Discover microwave for 10 mins at 120° C., 30 mins at 130° C. and 60 mins at 150° C. After cooling, the reaction mixture was diluted with brine and filtered. The solid was redissolved in MeOH/DCM, dried (Na2SO4), filtered and concentrated in vacuo. The residue was purified by preparative HPLC to give the product (10 mg). MS: [M+H]+=539.
Procedure Z5
Hydrochloride Salt Formation




A suspension of 1-[3-(7-Pyridazin-3-ylimidazo[1,2-a]pyridin-3-yl)phenyl]-3-(2,2,2-trifluoroethyl)urea (108 mg) in EtOAc (2 ml) was treated with saturated EtOAc/HCl and stirred until everything was in solution. The solution was concentrated under reduced pressure to give the product (112 mg). MS: [M+H]+=413.
4-(4-bromopyrazol-1-yl)piperidine hydrochloride




To 4-(4-Bromo-pyrazol-1-yl)-piperidine-1-carboxylic acid tert-butyl ester (1 g, 3. mmol) in ETOAc (4 ml) was added sat. ETOAc in HCl (5 ml) and the reaction mixture stirred at room temperature for 2 h. The solvent removed in vacuo and re-evaporated with toluene to give the product (0.68 g), which was used without further purification MS: [M+H]+=230
Procedure Z6
Amide Formation
Preparation of N-(2-Diethylamino-ethyl)-2-[4-(3-{3-[3-(2,2,2-trifluoro-ethyl)-ureido]-phenyl}-imidazo[1,2-a]pyridin-7-yl)-pyrazol-1-yl]-isobutyramide




To a solution of 2-Methyl-2-[4-(3-{3-[3-(2,2,2-trifluoroethypureido]phenyl}imidazo[1,2-a]pyridin-7-yl)pyrazol-1-yl]propionic acid (0.1 g, 0.2 mmol) in DMF (3 ml) added EDAC (0.043 g, 0.22 mmol), HOAt (0.031 g, 0.22 mmol) followed by N,N-diethylethylenediamine (0.029 ml, 0.2 mmol), Reaction stirred at RT until complete then partitioned between water and EtOAc. The aqueous layer was washed with further EtOAc, oranics combined, dried over MgSO4, filtered and concentrated under reduced pressure. The residue was purified by preparative HPLC to give the product (0.027 g) MS: [M+H]+=585
Procedure Z6a
SNAr Reaction




A mixture of 3,6-dichloropyridazine (500 mg; 3.35 mmol) and ethanolamine (250 □l; 1.25 equivalents) in 1 ml of NMP was heated at 120° C. for 20 minutes in a CEM Discover microwave synthesizer. The reaction mixture was diluted with brine then extracted with DCM (×2). The combined DCM extracts were dried (Na2SO4), filtered and evaporated. The crude material was triturated with Et2O, the solid was collected by filtration, washed with further Et2O and sucked dry to give 80 mg of the product as a fawn solid. 1H NMR (400 MHz, DMSO-d6): 7.34 (1H, d), 7.10 (1H, s), 6.95 (1H, d), 4.75 (1H, s), 3.58 (2H, d), 3.40 (2H, d).
Procedure Z7
O-dealkylation




A solution of 1-{3-[7-(6-Methoxy-pyridazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (40 mg; 0.09 mmol) in acetonitrile (5 ml) was treated with potassium iodide (50 mg; 3.3 equivalents), followed by trimethylchlorosilane (38 μl; 3.3 equivalents) then heated at 60° C. for 2 hours. The reaction was cooled, treated with 2M HCl, stirred for 30 minutes then evaporated. The residue was partitioned between DCM and sat NaHCO3, the undissolved solid was collected by filtration, washed with water then DCM and sucked dry. The product was isolated as a pale yellow solid (35 mg). 1H NMR (400 MHz, DMSO-d6): 9.50 (1H, s), 8.56 (1H, d), 8.24-8.12 (2H, m), 7.80 (2H, s), 7.58 (1H, d), 7.53-7.35 (3H, m), 7.25 (1H, d), 6.91 (1H, d), 4.02-3.88 (2H, m).
Z8
Deprotection of Sulphonamide
1-(3-{7-[4-(1H-Imidazol-2-yl)-pyrimidin-2-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




2-[2-(3-{3-[3-(2,2,2-Trifluoro-ethyl)-ureido]-phenyl}-imidazo[1,2-a]pyridin-7-yl)-pyrimidin-4-yl]-imidazole-1-sulfonic acid dimethylamide (140 mg, 0.23 mmol) dissolved in EtOH (5 ml) and MeOH(1 ml) treated with 2M HCl (1 ml) heated at 60° C. for 2 hours. Reaction mixture concentrated under reduced pressure and was purified by preparative HPLC to give product (20 mg).
MS: [M+H]+ 479
Z9
Deprotection of THP
1-[3-(7-{6-[4-(2-Hydroxy-ethyl)-piperazin-1-yl]-2-methyl-pyrimidin-4-yl}-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea




To 1-{3-[7-(2-Methyl-6-{4-[2-(tetrahydro-pyran-2-yloxy)-ethyl]-piperazin-1-yl}-pyrimidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea (150 mg) treated with saturated HCl in EtOAc, reaction stirred RT for 1 hour, precipitated solid filtered and washed with EtOAc. The crude product was purified by preparative HPLC twice to give product (30 mg).
MS: [M+H]+ 555
Examples 1 to 13
By following the methods described above, the compounds set out in the Table below were prepared.
All MS Data is [M+H]+














Eg.
Compound and Name
N.M.R. Data
M.S
Procedure



















1



   1-(3-{7-[5-(Tetrahydrofuran-2- yl)-[1,3,4]thiadiazol-2- yl]imidazo[1,2-a]pyridin-3-yl}- phenyl)-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO- d6): 9.00 (1H, s), 8.68 (1H, d), 8.28 (1H, s), 7.92 (1H, s), 7.77 (1H, s), 7.61 (1H, dd), 7.55- 7.44 (2H, m), 7.30 (1H, d), 6.89 (1H, t), 5.39 (1H, dd), 4.06-3.86 (4H, m), 2.49-2.41 (1H, m), 2.21-2.11 (1H, m),  2.08-1.96 (2H, m).
489
General route B, procedure B3b using 2- Bromo-5- (tetrahydro- furan-2-yl)- [1,3,4] thiadiazole (X1)


 


2



   2-Methyl-2-[4-(3-{3-[3-(2,2,2- trifluoroethyl)ureido]phenyl}imidazo [1,2-a]pyridin-7- yl)pyrazol-1-yl] propionic acid ethyl ester
1H NMR (400 MHz, DMSO- d6): 8.95 (1H, s), 8.64 (1H, s), 8.55 (1H, d), 8.16 (1H, s), 7.99-7.93 (1H, m), 7.80-7.78 (1H, m), 7.71 (1H, s), 7.48- 7.39 (2H, m), 7.35 (1H, dd), 7.25 (1H, dt), 6.85 (1H, t), 4.12 (2H, q), 4.01-3.89 (2H, m), 1.82 (6H, s), 1.15 (3H, t).
515
General route A, procedure A5a using 2- Methyl-2-[4- (4,4,5,5- tetramethyl- [1,3,2] dioxaborolan- 2-yl) pyrazol-1- yl] prop-ionic acid ethyl ester (Y1)


 


3



   1-[3-(7-Pyridin-2- ylimidazo[1,2-a]pyridin yl)phenyl]-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me-d3- OD): 8.71 (1H, d), 8.68 (1H, d), 8.33-8.24 (1H, m), 8.05 (1H, d), 8.01-7.91 (1H, m), 7.84 (1H, d), 7.79 (1H, s), 7.73 (1H, dd), 7.50 (1H, t), 7.47-7.38 (2H, m), 7.34 (1H, d), 3.96 (2H, q).
412
General route B, procedure B3a using 2- bromopyridine


 


4



   1-{3-[7-(1-Piperidin-4-yl-1H- pyrazol-4-yl)-imidazo[1,2- a]pyridin-3-yl]phenyl}-3- (2,2,2-trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, DMSO- d6): 9.42 (1H, s), 9.12 (1H, br s), 8.93 (1H, br s), 8.74-8.65 (2H, m), 8.32 (1H, s), 8.20 (1H, s), 8.08 (1H, s), 7.89 (1H, s), 7.70 (1H, dd), 7.51 (2H, d), 7.34-7.25 (1H, m), 7.11 (1H, t), 4.62-4.52 (1H, m), 4.01-3.89 (2H, m), 3.53-3.20 (2H, m), 3.17-3.06 (2H, m), 2.35-2.14 (4H, m).
484
General route B, procedure B3c using 4- (4-Bromo- pyrazol-1-yl)- piperidine-1- carboxylic acid tert-butyl ester (X2). Modification Z1a


 


5



   2-Methyl-2-[4-(3-{3-[3-(2,2,2- trifluoroethyl)ureido]phenyl}imidazo [1,2-a]pyridin-7- yl)pyrazol-1-yl]propionic acid
1H NMR (400 MHz, DMSO- d6): 9.49 (1H, s), 8.56-8.47 (2H, m), 8.05 (1H, s), 7.87 (1H, s), 7.74 (1H, s), 7.68 (1H, s), 7.55-7.47 (1H, m), 7.47-7.36 (2H, m), 7.27 (1H, dd), 7.25- 7.18 (1H, m), 4.00-3.87 (2H, m), 1.75 (6H, s).
487
General route A, procedure A5a using 2- Methyl-2-[4- (4,4,5,5- tetramethyl- [1,3,2] dioxaborolan- 2-yl)pyrazol-1- yl]propionic acid ethyl ester (Y1). Modification Z2


 


6



   1-(3-{7-[1-(1-Methyl-piperidin- 4-yl)-1H-pyrazol-4- yl]imidazo[1,2-a]pyridin-3- yl}phenyl)-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO- d6): 8.94 (1H, s), 8.53 (1H, dd), 8.48 (1H, s), 8.10 (1H, s), 7.92-7.85 (1H, m), 7.81-7.73 (1H, m), 7.70 (1H, s), 7.47- 7.38 (2H, m), 7.28 (1H, dd), 7.25 (1H, dt), 6.84 (1H, t), 4.20-4.09 (1H, m), 4.02-3.89 (2H, m), 2.95-2.84 (2H, m), 2.24 (3H, s), 2.17-1.94 (6H, m).
498
General route B, procedure B3c using 4- (4-Bromo- pyrazol-1-yl)-1- methyl- piperidine (X3)


 


7



   1-{3-[7-(6-Piperidin-1-yl- pyridazin-3-yl)-imidazo[1,2- a]pyridin-3-yl]phenyl}-3- (2,2,2-trifluoroethyl)urea
1H NMR (400 MHz, Me-d3- OD): 8.91 (1H, d), 8.59 (1H, s), 8.41 (1H, d), 8.25 (1H, s), 8.16 (1H, dd), 8.03 (1H, s), 7.90 (1H, d), 7.58 (1H, t), 7.49 (1H, d), 7.40 (1H, d), 3.95 (2H, q), 3.87 (4H, s), 1.83 (6H, s).
496
General route B, procedure B3d using 3- chloro-6- piperidin-1- ylpyridazine.


 


8



   1-{3-[7-(5,6-Dihydro-4H- cyclopentathiazol-2- yl)imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me-d3- OD): 8.64 (1H, d), 8.11 (1H, s), 7.83 (1H, t), 7.79 (1H, s), 7.59- 7.53 (1H, m), 7.50 (1H, t), 7.45-7.39 (1H, m), 7.38-7.31 (1H, m), 3.96 (2H, q), 3.04 (2H, t), 2.93 (2H, t), 2.64-2.56 (2H, m).
458
General route B, procedure B3a using 2- Chloro-5,6- dihydro-4H- cyclopenta- thiazole (X4)


 


9



   1-[3-(7-Pyridazin-3- ylimidazo[1,2-a]pyridin-3- yl)phenyl]-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, Me-d3- OD): 9.41 (1H, dd), 9.01 (1H, d), 8.81 (1H, s), 8.63 (1H, dd), 8.38-8.29 (2H, m), 8.13-8.03 (2H, m), 7.61 (1H, t), 7.53-7.47 (1H, m), 7.44 (1H, d), 3.96 (2H, q).
413
General route B, procedure B3d using 3- chloro- pyridazine. General Modification Z5.


 


10



   1-(3-{7-[1-(2-Hydroxy-1,1- dimethylethyl)-1H-pyrazol-4- yl]-imidazo[1,2-a]pyridin-3- yl}phenyl)-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO- d6): 8.98 (1H, s), 8.53 (1H, dd), 8.46 (1H, s), 8.10 (1H, s), 7.92-7.90 (1H, m), 7.78 (1H, s), 7.69 (1H, s), 7.48-7.38 (2H, m), 7.32 (1H, dd), 7.24 (1H, dt), 6.89 (1H, t), 4.99 (1H, t), 4.01-3.89 (2H, m), 3.62 (2H, d), 1.52 (6H, s).
473
General route A, procedure A5a using 2- Methyl-2-[4- (4,4,5,5- tetramethyl- [1,3,2] dioxaborolan- 2-yl) pyrazol- 1-yl]propionic acid ethyl ester (Y1). Modification Z2. Modification Z3


 


11



   1-[3-(7-Pyridin-3- ylethynylimidazo[1,2- a]pyridin-3-yl)phenyl]-3- (2,2,2-trifluoroethyl)urea
1H NMR (400 MHz, Me-d3- OD): 8.85 (1H, d), 8.81 (1H, d), 8.61 (1H, d), 8.22 (1H, s), 8.19-8.06 (2H, m), 7.99 (1H, s), 7.73-7.52 (3H, m), 7.48 (1H, d), 7.43-7.28 (1H, m), 4.02-3.89 (2H, m).
436
General Route C. Procedure C2 using 2- ethynylpyridine


 


12



   1-(3-{7-[6-(4-Methylpiperazin- 1-yl)pyridazin-3- yl]imidazo[1,2-a]pyridin-3- yl}phenyl)-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me-d3- OD): 8.66 (1H, d), 8.16 (1H, s), 8.06 (1H, d), 7.83 (1H, t), 7.81- 7.73 (2H, m), 7.50 (1H, t), 7.46-7.37 (2H, m), 7.34 (1H, d), 3.96 (2H, q), 3.84-3.72 (4H, m), 2.63 (4H, t), 2.39 (3H, s).
511
General route B, procedure B3d using 3- chloro-6-(4- methyl- piperidin-1-yl) pyridazine.


 


13



   1-{3-[7-(3-Methyl-3H- imidazol-4- ylethynyl)imidazo[1,2- a]pyridin-3-yl]phenyl}-3- (2,2,2-trifluoroethyl)urea formate
1H NMR (400 MHz, Me-d3- OD): 8.58 (1H, d), 8.13 (1H, s), 7.83-7.73 (3H, m), 7.49 (1H, t), 7.44-7.35 (2H, m), 7.31 (1H, d), 7.10 (1H, dd), 3.95 (2H, q), 3.84 (3H, s).
439
General Route C. Procedure C2 using 1- methyl-5- ethynyl- imidazole









Example 13B
1-{3-[7-(3-Methyl-3H-imidazol-4-ylethynyl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea dihydrochloride




A mixture of 1-[3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea (3.08 g, 8.3 mmol), 5-Ethynyl-1-methyl-1H-imidazole (1.78 g, 10 mmol) and cesium carbonate (5.43 g, 16.7 mmol) in dry DMSO (31 ml) was deoxygenated by evacuation /refill with N2 (×3). PdCl2(PCy3)2 (185 mg, 0.25 mmol) was added and the mixture was deoxygenated again (×3) then stirred and heated at 100° C. under N2 for 16 hours. The reaction was allowed to cool to RT, diluted with water (65 ml) and the mixture was extracted with EtOAc (3×50 ml). The combined organic extracts were washed with brine (40 ml) then dried (MgSO4), filtered and evaporated. The residue was mixed with dichloromethane (20 ml), cooled in ice and filtered to give the title compound (1.34 g, yellow solid). 1H NMR (400 MHz, Me-d3-OD): 8.59 (1H, d), 7.87-7.74 (4H, m), 7.50 (1H, t), 7.42 (1H, d), 7.37 (1H, s), 7.32 (1H, d), 7.10 (1H, dd), 3.95 (2H, q), 3.85 (3H, s). A solution of the title compound in methanol (10 ml) was cooled in ice and was treated with a solution of saturated hydrogen chloride in ethyl acetate (15 ml). The mixture was evaporated to give the bis-HCl salt (1.59 g, yellow foam). 1H NMR (400 MHz, Me-d3-OD): 9.06 (1H, s), 8.88 (1H, d), 8.34-8.27 (2H, m), 8.08 (2H, d), 7.65 (1H, d), 7.59 (1H, t), 7.47-7.35 (2H, m), 4.09 (3H, s), 3.96 (2H, q).
Examples 14 to 114
By following the methods described above, the compounds set out in the Table below were prepared.
All MS Data is [M+H]+














Eg.
Compound and Name
N.M.R. Data
M.S
Procedure



















14



   1-{3-[7-(3-Dimethylaminoprop-1- ynyl)imidazo[1,2-a]pyridin-3- yl]phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me- d3-OD): 8.54 (1H, d), 7.80 (1H, t), 7.76 (1H, s), 7.71 (1H, s), 7.49 (1H, t), 7.45- 7.38 (1H, m), 7.38-7.25 (1H, m), 7.00 (1H, dd), 3.95 (2H, q), 3.60 (2H, s), 2.43 (6H, s).
416
General Route C. Procedure C2 using 1- dimethylamino- 2-propyne


 


15



   1-{3-[7-(6-Morpholin-4-y- pyridazin-3-yl)imidazo[1,2- a]pyridin-3-yl]phenyl}-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.97 (1H, d), 8.64 (1H, s), 8.58 (1H, d), 8.31 (1H, s), 8.20 (1H, dd), 8.10 (1H, t), 8.03 (1H, d), 7.60 (1H, t), 7.49-7.38 (2H, m), 4.03-3.92 (6H, m), 3.88 (4H, t).
498
General route B, procedure B3d using 3-chloro- 6-morpholin-1- ylpyridazine.


 


16



   1-[3-(7-Thiophen-3- ylethynylimidazo[1,2-a]pyridin yl)phenyl]-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me- d3-OD): 8.55 (1H, d), 7.81 (1H, t), 7.77 (1H, s), 7.77- 7.72 (2H, m), 7.55-7.45 (2H, m), 7.45-7.37 (1H, m), 7.31 (1H, d), 7.27 (1H, dd), 7.06 (1H, dd), 3.95 (2H, q).
441
General Route C. Procedure C2 using 3- ethynylthiophene 


 


17



   1-(2,2,2-Trifluoroethyl)-3-{3-[7- (5- trifluoromethyl[1,3,4]thiadiazol- 2-yl)-imidazo[1,2-a]pyridin-3- yl]phenyl}urea
1H NMR (400 MHz, Me- d3-OD): 8.76 (1H, d), 8.40 (1H, s), 7.93 (1H, s), 7.89 (1H, t), 7.74 (1H, dd), 7.53 (1H, t), 7.44 (1H, d), 7.36 (1H, d), 3.96 (2H, q).
487
General route B, procedure B3e using 2-chloro- 5- trifluoromethyl- [1,3,4]thiadiazole


 


18



   1-{3-[7-(3-Hydroxybut-1- ynyl)imidazo[1,2-a]pyridin-3- yl]phenyl}-3-(2,2,2- trifluoroethyl)urea formate
1H NMR (400 MHz, Me- d3-OD): 8.52 (1H, d), 8.16 (1H, s), 7.78 (2H, d), 7.68 (1H, s), 7.54-7.44 (1H, m), 7.40 (1H, d), 7.33-7.23 (1H, m), 6.98 (1H, dd), 4.81-4.68 (1H, m), 3.95 (2H, q), 1.51 (3H, d).
403
General Route C. Procedure C2 using 3- hydroxy-but-1- yne


 


19



   1-{3-[7-(4-Hydroxybut-1- ynyl)imidazo[1,2-a]pyridin-3- yl]phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me- d3-OD): 8.49 (1H, d), 7.78 (1H, s), 7.72 (1H, s), 7.67- 7.59 (1H, m), 7.47 (1H, t), 7.41 (1H, d), 7.29 (1H, d), 7.01-6.90 (1H, m), 3.95 (2H, q), 3.78 (2H, t), 2.70 (2H, t).
403
General Route C. Procedure C2 using 4- hydroxy-but-1- yne


 


20



   1-[5-(7-Pyridazin-3- ylimidazo[1,2-a]pyridin-3- yl)pyridin-3-yl]-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO-d6): 10.26 (1H, s), 9.41 (1H, dd), 9.04 (1H, d), 8.94 (1H, d), 8.81 (1H, s), 8.69 (1H, d), 8.67-8.59 (2H, m), 8.50 (1H, d), 8.34-8.25 (1H, m), 8.04- 7.94 (1H, m), 7.54 (1H, t), 4.06-3.92 (2H, m).
414
General Route D. Procedure D2 using 3- Chloro- pyridazine. 


 


21



   1-{5-[7-(6-Methylpyridazin- yl)imidazo[1,2-a]pyridin-3- yl]pyridin-3-yl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO-d6): 10.15 (1H, s), 9.00 (1H, d), 8.90 (1H, d), 8.79-8.74 (1H, m), 8.65 (1H, d), 8.63-8.58 (1H, m), 8.56 (1H, d), 8.47 (1H, t), 8.31-8.21 (1H, m), 7.94- 7.85 (1H, m), 7.55-7.44 (1H, m), 4.05-3.92 (2H, m), 2.76 (3H, s).
428
General Route D. Procedure D2 using 3- Chloro-6- methyl- pyridazine


 


22



   1-(3-{7-[5-(2-Piperidin-1-ylethyl)- [1,3,4]thiadiazol-2- yl]imidazo[1,2-a] pyridin-3- yl}phenyl)-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.71 (1H, d), 8.19 (1H, s), 7.87 (2H, s), 7.66 (1H, dd), 7.51 (1H, t), 7.43 (1H, d), 7.35 (1H, d), 3.96 (2H, q), 3.54-3.45 (2H, m), 3.12-2.96 (2H, m), 2.96- 2.68 (4H, m), 1.83-1.70 (4H, m), 1.67-1.54 (2H, m).
530
General Route B. Procedure B3b using 1-[2- (5-Bromo- [1,3,4]thiadiazol- 2- yl)ethyl] piperidine (X5)


 


23



   1-{3-[7-(6-Piperazin-1- ylpyridazin-3-yl)-imidazo[1,2- a]pyridin-3-yl]phenyl}-3-(2,2,2- trifluoroethyl)urea trifluoroacetate
1H NMR (400 MHz, Me- d3-OD): 8.91 (1H, d), 8.59 (1H, s), 8.32-8.18 (3H, m), 8.04 (1H, s), 7.64-7.52 (2H, m), 7.48 (1H, d), 7.41 (1H, d), 4.10 (4H, t), 3.96 (2H, q), 3.44 (4H, t).
497
General Route B. Procedure B3b using 3- Chloro-6- piperidin-1-yl pyridazine


 


24



   1-[5-(7-[1,3,4]Thiadiazol-2- ylimidazo[1,2-a]pyridin-3- yl)pyridin-3-yl]-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, DMSO-d6): 9.71 (1H, s), 9.24 (1H, s), 6.73 (1H, d), 8.69 (1H, d), 8.53 (1H, d), 3.33 (1H, s), 8.23 (1H, t), 8.04 (1H, s), 7.67 (1H, dd), 7.13 (1H, t), 4.04-3.90 (2H, m).
420
General Route D. Procedure D2 using 2- Bromo- [1,3,4] thiadiazole.


 


25



   1-[3-(7-Chloroimidazo[1,2- a]pyridin-3-yl)-phenyl]-3- cyclopropylurea
1H NMR (400 MHz, DMSO-d6): 8.55 (1H, d), 8.49 (1H, s), 7.84 (1H, d), 7.76 (1H, s), 7.75 (1H, s), 7.49-7.36 (2H, m), 7.19 (1H, dd), 7.05 (1H, dd), 6.49 (1H, s), 2.61-2.53 (1H, m), 0.70-0.59 (2H, m), 0.47-0.38 (2H, m).
327
General Route E. Steps E1-E4.


 


26



   1-{3-[7-(3-Hydroxyprop-1- ynyl)imidazo[1,2-a]pyridin-3- yl]phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me- d3-OD): 8.53 (1H, d), 7.85-7.78 (1H, m), 7.76 (1H, s), 7.70 (1H, s), 7.49 (1H, t), 7.41 (1H, d), 7.30 (1H, d), 6.99 (1H, dd), 4.47 (2H, s), 3.95 (2H, q).
389
General Route C. Procedure C2 using propargyl alcohol


 


27



   1-{3-[7-(7-Methyl-5-oxo-5H- [1,3,4]thiadiazolo[3,2- a]pyrimidin-2-yl)imidazo[1,2- a]pyridin-3-yl]phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO-d6): 9.05 (1H, s), 8.75 (1H, d), 8.39 (1H, s), 8.00 (1H, s), 7.78 (1H, s), 7.61-7.52 (2H, m), 7.52- 7.46 (1H, m), 7.31 (1H, d), 6.96-6.90 (1H, m), 6.39- 6.33 (1H, m), 4.00-3.90 (2H, m), 2.33 (3H, s).
500
General Route B. Procedure B3b using 2- Bromo-7- methyl- [1,3,4]thiadiazolo [3,2- a]pyrimidin-5- one


 


28



   1-Cyclopropyl-3-{3-[7-(4- fluorophenyl)imidazo[1,2- a]pyridin-3-yl]phenyl}urea
1H NMR (400 MHz, DMSO-d6): 8.62 (1H, d), 8.50 (1H, s), 7.99 (1H, s), 7.97-7.87 (2H, m), 7.82 (1H, s), 7.78 (1H, s), 7.42 (2H, d), 7.40-7.29 (3H, m), 7.27-7.18 (1H, m), 6.48 (1H, s), 2.62-2.53 (1H, m), 0.71-0.60 (2H, m), 0.48- 0.39 (2H, m).
387
General Route E.


 


29



   1-[5-(7-Cyclopropylethynyl imidazo[1,2-a]pyridin-3- yl)pyridin-3-yl]-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO-d6): 9.16 (1H, s), 8.64 (1H, d), 8.50 (1H, dd), 8.46 (1H, d), 8.19- 8.12 (1H, m), 7.90 (1H, s), 7.68 (1H, s), 7.07 (1H, t), 6.90 (1H, dd), 4.02-3.90 (2H, m), 1.66-1.57 (1H, m), 1.00-0.89 (2H, m), 0.86-0.76 (2H, m)
400
General Route C. Procedure C1 using 1-[5- (4,4,5,5- Tetramethyl- [1,3,2] dioxaborolan-2- yl)pyridin-3-yl]- 3-(2,2,2- trifluoroethyl) urea (as  described in Procedure D4). Procedure C2 using cyclopropyl ethyne.


 


30



   1-[3-(7-Pyrazin-2-ylimidazo[1,2- a]pyridin-3-yl)phenyl]-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me- d3-OD): 9.28 (1H, s), 8.74 (1H, s), 8.69 (1H, d), 8.60 (1H, d), 8.41 (1H, s), 7.84 (1H, s), 7.82-7.74 (2H, m), 7.49 (1H, t), 7.42 (1H, d), 7.33 (1H, d), 3.96 (2H, q).
413
General Route B. Procedure B3a using 2- bromopyrazine.


 


31



   1-[5-(7-Chloroimidazo[1,2- a]pyridin-3-yl)pyridin-3-yl]-3- (2,2,2-trifluoroethyl)urea
1H NMR (400 MHz, DMSO-d6): 9.18-9.11 (1H, m), 8.65 (1H, d), 8.58 (1H, d), 8.47 (1H, d), 8.17 (1H, t), 7.89 (1H, s), 7.87 (1H, d), 7.12-7.00 (2H, m), 4.02-3.90 (2H, m).
370
General Route A. Procedure A1, A2. Procedure A3 using 1-[5- (4,4,5,5- Tetramethyl- [1,3,2] dioxaborolan-2- yl) pyridin-3-yl]- 3-(2,2,2- trifluoroethyl) urea (as  described in Procedure D4).


 


32



   1-(3-{7-[1-(1-Isopropylazetidin-3- yl)-1H-pyrazol-4-yl]imidazo[1,2- a]pyridin-3-yl}phenyl)-3-(2,2,2- trifluoroethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.56 (1H, dd), 8.36 (1H, s), 8.08 (1H, s), 7.82 (1H, t), 7.78 (1H, dd), 7.67 (1H, s), 7.48 (1H, t), 7.39 (1H, ddd), 7.31 (1H, dt), 7.28 (1H, dd), 5.06 (1H, quintet), 3.95 (2H, q), 3.91-3.83 (2H, m), 3.68- 3.58 (2H, m), 2.71-2.61 (1H, m), 1.05 (6H, d).
498
General Route B. Procedure B3a using 4- Bromo-1-(1- isopropyl- azetidin- 3-yl)-1H- pyrazole hydrochloride (synthesised by procedure X3 using 1-(tert- butoxycarbonyl)- 3- (methane- sulfonyloxy) azetidine in step 1 and 2- iodopropane in step 3)


 


33



   1-{3-[7-(6-Chloropyridazin-3-yl)- imidazo[1,2-a]pyridin-3- yl]phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, DMSO-d6): 9.06 (1H, s), 8.72 (1H, d), 8.61 (1H, d), 8.55 (1H, s), 8.08 (1H, d), 7.91 (1H, s), 7.88 (1H, dd), 7.80 (1H, s), 7.55-7.42 (2H, m), 7.31 (1H, d), 6.96 (1H, t), 4.03-3.88 (2H, m).
447
General Route B. Procedure B3d using 3,6- dichloro- pyridazine.


 


34



   1-[3-(7-Pyrimidin-4- ylimidazo[1,2-a]pyridin-3- yl)phenyl]-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 9.41 (1H, d), 9.05 (1H, d), 8.98 (1H, d), 8.86 (1H, s), 8.36-8.33 (1H, m), 8.33-8.27 (2H, m), 8.08 (1H, t), 7.60 (1H, t), 7.51- 7.45 (1H, m), 7.43 (1H, dd), 3.96 (2H, q).
413
General Route B. Procedure B3d using 4- chloropyrmidine. General modification Z5.


 


35



   1-[5-(7-Pyrimidin-2-yl- imidazo[1,2-a] pyridine-3- yl)pyridin-3-yl]-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 9.32 (1H, d), 9.12-9.00 (4H, m), 8.93 (1H, s), 8.89 (1H, d), 8.65 (1H, dd), 8.59 (1H, s), 7.61 (1H, t), 4.01 (2H, q).
414
General Route D. Procedure D2 using 2- chloropyrimidine. General modification Z5.


 


36



   1-(3-{7-[6-(4- Dimethylaminopiperidin-1- yl)pyridazin-3-yl]imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoroethyl)urea hydrochloride.
1H NMR (400 MHz, DMSO-d6): 7.83 (1H, d), 7.63 (1H, s), 7.32 (1H, s), 7.22 (1H, d), 7.04 (1H, s), 6.99-6.89 (2H, m), 6.68 (1H, t), 6.64-6.55 (2H, m), 6.51 (1H, d), 4.05 (6H, s), 3.94-3.79 (2H, m), 3.15 (2H, q), 2.76-2.63 (1H, m), 2.28 (2H, t), 1.48-1.34 (2H, m), 1.05-0.83 (2H, m).
539
General Route B. Procedure B3d using 3,6- dichloro- pyridazine.  General modification Z4. General modification Z5.


 


37



   1-{3-[7-(1-Azetidin-3-yl-1H- pyrazol-4-yl)-imidazo[1,2- a]pyridin-3-yl]phenyl}-3-(2,2,2- trifluoroethyl)urea
1H NMR (400 MHz, Me- d3-OD): 8.54 (1H, d), 8.33 (1H, s), 8.09 (1H, s), 7.81 (1H, s), 7.76 (1H, s), 7.66 (1H, s), 7.47 (1H, t), 7.38 (1H, d), 7.29 (1H, d), 7.26 (1H, dd), 5.39-5.29 (1H, m), 4.18 (2H, t), 4.06-3.98 (2H, m), 3.98-3.89 (2H, m).
456
General Route B. Procedure B3a using 4- Bromo-1- (azetidin-3-yl)- 1H-pyrazole trifluoroacetate.


 


38



   1-(3-{7-[1-(1-Methylpiperidin-3- yl)-1H-pyrazol-4-yl]imidazo[1,2- a]pyridin-3-yl]phenyl)-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, DMSO-d6): 10.94 (1H, d), 9.44-9.37 (1H, m), 8.85 (1H, s), 8.76 (1H, d), 8.46- 8.39 (1H, m), 8.35 (1H, s), 8.11 (1H, d), 7.91 (1H, s), 7.80-7.72 (1H, m), 7.57- 7.49 (2H, m), 7.35-7.27 (1H, m), 7.10 (1H, t), 4.87- 4.77 (1H, m), 4.61 (1H, dd), 4.02-3.87 (3H, m), 3.81-3.81 (3H, m), 3.16- 3.06 (1H, m), 2.87-2.79 (1H, m), 2.68 (2H, d), 2.56-2.46 (20H, m), 2.09- 1.90 (2H, m).
498
General Route B. Procedure B3a using 4- bromo-1-(1- methylpiperidin- 3-yl)-1H- pyrazole (X6). General modification Z5.


 


39



   3-[4-(3-{3-[3-(2,2,2- Trifluoroethyl)ureido]phenyl} imidazo[1,2-a]pyridin-7-yl)pyrazol-1- yl]piperidine-1-carboxylic acid tert-butyl ester formate
1H NMR (400 MHz, Me- d3-OD): 8.57 (1H, d), 8.33 (1H, s), 8.22 (1H, s), 8.10- 8.01 (1H, m), 7.85 (1H, s), 7.80 (1H, s), 7.73 (1H, s), 7.49 (1H, t), 7.39 (1H, d), 7.37-7.33 (1H, m), 7.31 (1H, d), 4.38-4.21 (2H, m), 4.04-3.89 (3H, m), 3.43- 3.34 (1H, m), 3.03 (1H, t), 2.32-2.10 (2H, m), 1.90 (1H, s), 1.74-1.57 (1H, m), 1.49 (9H, s).
584
General Route B. Procedure B3a using 4- bromo-1-(1-tert- butoxycarbonyl- piperidin-3-yl)- 1H-pyrazole (X7).


 


40



   1-{3-[7-(1-Piperidin-3-yl-1H- pyrazol-4-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea formate
1H NMR (400 MHz, DMSO-d6): 9.57 (1H, s), 8.57-8.47 (2H, m), 8.30 (3H, s), 8.15-8.09 (1H, m), 7.93-7.86 (1H, m), 7.81 (1H, s), 7.69 (1H, d), 7.52 (1H, s), 7.48-7.39 (2H, m), 7.28 (1H, s), 7.22 (1H, d), 4.32-4.24 (1H, m), 3.93 (2H, s), 3.31 (1H, d), 2.98 (1H, d), 2.91 (1H, s), 2.61- 2.54 (1H, m), 2.17 (1H, d), 1.95 (1H, d), 1.79 (1H, d), 1.60 (1H, d).
484
General Route B. Procedure B3a using 4- bromo-1-(1-tert- butoxycarbonyl- piperidin-3-yl)- 1H-pyrazole (X7). Modification Z1a.


 


41



   1-(3-{7-[1-(1-Methyl-azetidin-3- yl)-1H-pyrazol-4-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.70 (1H, d), 8.44 (1H, s), 8.34 (1H, s), 8.03- 7.90 (3H, m), 7.61-7.50 (2H, m), 7.40 (1H, d), 7.35 (1H, d), 5.49 (1H, quintet), 4.82-4.70 (2H, m), 4.70- 4.56 (2H, m), 3.96 (2H, q), 3.15 (3H, s).
470
General Route B. Procedure B3a using 4- Bromo-1-(1- methylazetidin- 3-yl)-1H- pyrazole hydrochloride.


 


42



   1-[3-(7-Pyrimidin-5-yl- imidazo[1,2-a]pyridin-3-yl)- phenyl]-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 9.25 (2H, s), 9.22 (1H, s), 8.73 (1H, d), 8.07 (1H, s), 7.87 (1H, d), 7.82 (1H, s), 7.51 (1H, t), 7.47- 7.38 (2H, m), 7.34 (1H, d), 3.96 (2H, q).
413
General Route B. Procedure B3d using 5- bromopyrimidine; procedure Z5


 


43



   3-(3-{3-[3-(2,2,2-Trifluoroethyl)- ureido]-phenyl}-imidazo[1,2- a]pyridin-7-yl)-thiophene-2- carboxylic acid amide hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.85-8.77 (1H, m), 8.22-8.16 (1H, m), 8.10-7.99 (2H, m), 7.79 (1H, d), 7.63 (1H, dd), 7.61-7.53 (1H, m), 7.46 (1H, dd), 7.43-7.35 (2H, m), 4.02-3.89 (2H, m).
460
General Route B. Procedure B3c using 3- bromothiophene- 2-carboxamide; procedure Z5


 


44



   1-(3-{7-[1-(1-Ethyl-pyrrolidin-3- yl)-1H-pyrazol-4-yl)-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.54 (1H, d), 8.31 (1H, s), 8.02 (1H, s), 7.81 (1H, s), 7.75 (1H, s), 7.71- 7.59 (1H, m), 7.55-7.41 (1H, m), 7.38 (1H, d), 7.29 (1H, d), 7.25 (1H, dd), 5.12-4.99 (1H, m), 3.95 (2H, q), 3.25 (1H, dd), 3.18-2.98 (2H, m), 2.98- 2.84 (1H, m), 2.84-2.64 (2H, m), 2.62-2.46 (1H, m), 2.43-2.23 (1H, m), 1.23 (3H, t).
498
General Route B. Procedure B3a using 4- Bromo-1-(1- ethylpyrrolidin-3- yl)-1H-pyrazole (X8).


 


45



   1-{3-[7-(1-Pyrrolidin-3-yl-1H- pyrazol-4-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.51 (1H, d), 8.25 (1H, s), 8.00 (1H, s), 7.81 (1H, s), 7.73 (1H, s), 7.64 (1H, s), 7.59-7.43 (1H, m), 7.43-7.33 (1H, m), 7.28 (1H, d), 7.23 (1H, dd), 5.09-4.97 (1H, m), 4.86 (7H, s), 4.04-3.78 (2H, m), 3.65-3.57 (1H, m), 3.57- 3.33 (3H, m), 3.17-3.03 (1H, m), 2.67 (1H, s), 2.51-2.19 (2H, m), 1.99- 1.68 (1H, m).
470
General Route B. Procedure B3a using 4- Bromo-1-(1-tert- butoxycarbonyl- pyrrolidin-3-yl)- 1H-pyrazole (X9). General Modification Z1a.


 


46



   1-(2,2,2-Trifluoro-ethyl)-3-{3-[7- (4-trifluoromethyl-pyrimidin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 9.35 (1H, d), 9.04 (1H, s), 8.98 (1H, d), 8.54 (1H, dd), 8.31 (1H, s), 8.09-7.96 (2H, m), 7.60 (1H, t), 7.53-7.38 (2H, m), 3.96 (2H, q).
481
General Route B. Procedure B3d using 2- bromo-4- trifluoromethyl- pyrimidine; procedure Z5


 


47



   1-(3-{7-[1-(Tetrahydro-furan-3- yl)-1H-pyrazol-4-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.74 (1H, d), 8.50 (1H, s), 8.20 (1H, s), 8.09 (1H, s), 8.08 (1H, s), 8.02 (1H, s), 7.79 (1H, dd), 7.57 (1H, t), 7.49-7.41 (1H, m), 7.38 (1H, d), 5.20-5.11 (1H, m), 4.19 (1H, q), 4.15-4.05 (2H, m), 4.03- 3.89 (3H, m), 2.63-2.52 (1H, m), 2.48-2.36 (1H, m), 0.95-0.87 (1H, m).
471
General Route B. Procedure B3c using 4- bromo-1- (tetrahydrofuran- 3-yl)-1H- pyrazole (X10); procedure Z5


 


48



   1-{3-[7-(4,6-Dimethoxy- pyrimidin-2-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.97-8.87 (2H, m), 8.49 (1H, dd), 8.26 (1H, s), 8.06 (1H, t), 7.59 (1H, t), 7.46 (1H, dd), 7.42 (1H, d), 6.27 (1H, s), 4.14 (6H, s), 3.96 (2H, q).
473
General Route B. Procedure B3d using 2- chloro-4,6- dimethoxy- pyrimidine.


 


49



   1-{3-[7-(3,4,5,6-Tetrahydro-2H- [1,2′]bipyridinyl-5′-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.61 (1H, d), 8.52 (1H, d), 7.97 (1H, dd), 7.83 (1H, t), 7.77 (1H, s), 7.70 (1H, s), 7.49 (1H, t), 7.45-7.37 (1H, m), 7.32 (2H, dd), 6.94 (1H, d), 3.96 (2H, q), 3.70-3.61 (4H, m), 1.79-1.64 (6H, m).
495
General route A, procedure A5b using 5- (4,4,5,5- Tetramethyl- [1,3,2] dioxaborolan- 2-yl)-3,4,5,6- tetrahydro-2H- [1,2′]bipyridinyl; procedure Z5


 


50



   1-(3-{7-[1-(1-Isopropylpiperidin- 4-yl)-1H-pyrazol-4- yl]imidazo[1,2-a]pyridin-3-yl}- phenyl)-3-(2,2,2- trifluoroethyl)urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.65 (1H, d), 8.43 (1H, s), 8.15 (1H, s), 7.96- 7.89 (2H, m), 7.86 (1H, s), 7.57-7.45 (2H, m), 7.42- 7.37 (1H, m), 7.33 (1H, d), 4.77-4.60 (1H, m), 3.96 (2H, q), 3.74-3.58 (3H, m), 3.41-3.34 (2H, m), 2.56- 2.37 (4H, m), 1.45 (6H, d).
526
General Route B. Procedure B3a using 4- Bromo-1-(1- isopropyl- piperidin- 4-yl)-1H- pyrazole (X11). General Modification Z5.


 


51



 1-{3-[7-(6-Methoxy-pyridazin-3- yl)- 1,7-imidazo[1,2-a]pyridin-3- yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, DMSO-d6): 8.97 (1H, s), 8.69 (1H, d), 8.46 (1H, d), 8.41 (1H, s), 7.90-7.82 (2H, m), 7.78 (1H, s), 7.54-7.42 (2H, m), 7.38 (1H, d), 7.30 (1H, d), 6.86 (1H, t), 4.11 (3H, s), 4.03- 3.89 (2H, m)
443
General route B, procedure B3d using 3-chloro- 6-methoxy- pyridazine


 


52



  1-{3-[7-(6-Oxo-1,6-dihydro pyridazin-3-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)- urea
1H NMR (400 MHz, DMSO-d6): 9.50 (1H, s), 8.56 (1H, d), 8.24-8.12 (2H, m), 7.80 (2H, s), 7.58 (1H, d), 7.53-7.35 (3H, m), 7.25 (1H, d), 6.91 (1H, d), 4.02-3.88 (2H, m)
429
General route B, procedure B3d using 3-chloro- 6-methoxy- pyridazine; procedure Z7.


 


53



   1-{3-[7-(4,5,6,7-Tetrahydro- thiazolo[5,4-c]pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoroethyl)- urea formate
1H NMR (400 MHz, Me- d3-OD): 8.67 (1H, d), 8.34 (1H, s), 8.17 (1H, s), 7.92- 7.80 (2H, m), 7.58 (1H, dd), 7.51 (1H, t), 7.44-7.37 (1H, m), 7.37-7.29 (1H, m), 4.48 (2H, s), 4.02-3.89 (2H, m), 3.62-3.47 (2H, m), 3.22-3.12 (2H, m).
473
General route B, procedure B3a using t-butyl 2- bromo-6,7- dihydro[1,3] thiazolo[5,4- C]pyridine- 5(4H)- carboxylate followed by procedure Z1a


 


54



   2-(3-{3-[3-(2,2,2-Trifluoro-ethyl)- ureido]-phenyl}-imidazo[1,2- a]pyridin-7-yl)-1,4,6,7- tetrahydro-3lambda *4*-thiazolo[5,4-c]pyridine-5- carboxylic acid tert-butyl ester
1H NMR (400 MHz, Me- d3-OD): 8.63 (1H, d), 8.12 (1H, s), 7.81 (2H, d), 7.59- 7.38 (3H, m), 7.32 (1H, d), 4.75 (2H, s), 3.96 (2H, q), 3.89-3.72 (2H, m), 2.94 (2H, t), 1.53 (9H, s).
573
General route B, procedure B3d using 1-butyl 2- bromo-6,7- dihydro[1,3] thiazolo[5,4- C]pyridine- 5(4H)- carboxylate


 


55



   4-[4-(3-{5-[3-(2,2,2-Trifluoro- ethyl)-ureido]-pyridin-3-yl}- imidazo[1,2-a]pyridin-7-yl)- pyrazol-1-yl]-piperidine-1- carboxylic acid tert-butyl ester
1H NMR (400 MHz, DMSO-d6): 9.20 (1H, s), 8.61 (1H, d), 8.56 (1H, d), 8.52 (1H, s), 8.48 (1H, d), 8.21 (1H, t), 8.13 (1H, s), 7.92 (1H, s), 7.82 (1H, s), 7.31 (1H, dd), 7.11 (1H, t), 4.44-4.35 (1H, m), 4.12- 4.02 (2H, m), 4.02-3.91 (2H, m), 3.03-2.88 (2H, m), 2.13-2.02 (2H, m), 1.89-1.75 (2H, m), 1.44 (9H, s).
585
General route A: procedure A1; A2; & A4 using 1M Na2CO3, PdCl2(PPh3)3, DME and 1-[5- (4,4,5,5- tetramethyl- [1,3,2] dioxaborolan-2- yl)-pyridin-3-yl]- 3-(2,2,2- trifluoro-ethyl)- urea from procedure D4; B2, procedure B3c using 4-(4- bromo-pyrazol- 1-yl)-pipe-ridine- 1-carboxylic acid tert-butyl ester


 


56



   1-{3-[7-(1-Methyl-1H-pyrazol-4- ylethynyl)-imidazo[1,2-a]pyridin- 3-yl]-phenyl}-3-(2,2,2-trifluoro- ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.54 (1H, d), 8.14 (1H, s), 7.92 (1H, s), 7.89- 7.79 (1H, m), 7.78 (1H, s), 7.71 (1H, s), 7.70 (1H, s), 7.49 (1H, t), 7.45-7.36 (1H, m), 7.35-7.25 (1H, m), 7.04 (1H, dd), 4.02- 3.86 (5H, m).
439
General Route C. Procedure C3, procedure C2 using 1- methyl-4- trimethylsilanyl- ethynyl- 1H-pyrazole (reaction time 3 hrs)


 


57



   1-{3-[7-(3-Aminomethyl-1- methyl-1H-pyrazol-4-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, Me- d3-OD): 8.61 (1H, d), 8.05 (1H, s), 7.90 (1H, s), 7.72 (1H, s), 7.59 (1H, s), 7.49 (1H, t), 7.36-7.29 (2H, m), 7.13 (1H, dd), 4.30 (2H, s), 4.02-3.91 (5H, m).
444
General route B, procedure B3a using (4-bromo- 1-methyl-1H- pyrazol-3- yl)methylamine


 


58



   1-{3-[7-(5-Methyl-pyrimidin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}- 3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.77 (2H, s), 8.73- 8.63 (2H, m), 8.04 (1H, dd), 7.84 (1H, t), 7.81 (1H, s), 7.51 (1H, t), 7.48-7.40 (1H, m), 7.40-7.31 (1H, m), 3.96 (2H, q), 2.41 (3H, s).
427
General route B, procedure B3d 2-chloro-5- methyl- pyrimidine;  procedure Z5


 


59



   1-{3-[7-(4-Methyl-pyrimidin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}- 3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.99 (1H, s), 8.93 (1H, d), 8.84 (1H, d), 8.55 (1H, dd), 8.29 (1H, s), 8.02 (1H, s), 7.59 (1H, t), 7.52 (1H, d), 7.46 (1H, d), 7.42 (1H, d), 3.96 (2H, q), 2.69 (3H, s).
[Ad- duct] + 427
General route B, procedure B3a using 2-Chloro- 4- Methyl- pyrimidine;  procedure Z5


 


60



   1-{3-[7-(5-Fluoro-pyrimidin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}- 3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, DMSO-d6): 9.34-9.28 (1H, m), 9.17 (2H, s), 8.89 (1H, d), 8.76 (1H, s), 8.43 (1H, s), 8.23 (1H, dd), 7.89 (1H, s), 7.62-7.50 (2H, m), 7.38-7.30 (1H, m), 7.09- 7.00 (1H, m), 3.99-3.92 (2H, m).
[Ad- duct] +  431
General route B, procedure B3a using 2-Chloro- 5- Fluoro- pyrimidine;  procedure 25


 


61



   1-{3-[7-(2-Methyl-pyrimidin-4-yl)- imidazo[1,2-a] pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, DMSO-d6): 9.46 (1H, s), 8.97 (1H, d), 8.91 (1H, d), 8.79 (1H, s), 8.51 (1H, s), 8.27-8.16 (2H, m), 7.93 (1H, s), 7.60-7.52 (2H, m), 7.38-7.30 (1H, m), 7.18- 7.08 (1H, m), 4.00-3.91 (2H, m), 2.78 (3H, s).
[Ad- duct] + 427
General route B, procedure B3a using 4-Chloro- 2- Methyl- pyrimidine;  procedure Z5


 


62



   1-{3-[7-(1-Methyl-6-oxo-1,6- dihydro- pyridazin-3-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.93-8.83 (1H, m), 8.43 (1H, s), 8.31-8.21 (2H, m), 8.12 (1H, dd), 8.06 (1H, s), 7.64-7.54 (1H, m), 7.46 (1H, d), 7.41 (1H, d), 7.20 (1H, d), 4.03- 3.89 (5H, m)
443
General route B, procedure B3d using 6-chloro- 2-methyl-2H- pyridazin-3-one; procedure Z5


 


63



   1-(3-{7-[1-(1-Acetyl-piperidin-4- yl)-1H-pyrazol-4-yl]-imidazo[1,2- a] pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.59 (1H, d), 8.34 (1H, s), 8.20 (2H, s), 8.06 (1H, s), 7.84 (2H, d), 7.75 (1H, s), 7.50 (1H, t), 7.44- 7.34 (2H, m), 7.31 (1H, d), 4.69 (1H, d), 4.60-4.47 (1H, m), 4.11 (1H, d), 3.95 (2H, q), 3.40-3.35 (1H, m), 2.94-2.81 (1H, m), 2.20 (5H, d), 2.14-1.91 (2H, m).
526
General route B, procedure B3a using X12


 


64



   1-{3-[7-(2,3-Dimethyl-3H- imidazol-4- ylethynyl)-imidazo[1,2-a] pyridin-3- yl]-phenyl}-3-(2,2,2-trifluoro- ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.63-8.55 (1H, m), 7.82 (3H, d), 7.50 (1H, t), 7.47-7.37 (1H, m), 7.36- 7.27 (2H, m), 7.10 (1H, dd), 3.95 (2H, q), 3.75 (3H, s), 2.46 (3H, s).
453
General Route C. Procedure C3 using 5- bromo-1,2- dimethyl-1H- imidazole (microwave  110° C. for 1 hr; solvent dioxane), procedure C4, procedure C2 using 5-ethynyl- 1,2-dimethyl-1H- imidazole (reaction time 4 hrs)


 


65



   1-{3-[7-(4-Hydroxy-1-methyl- piperidin-4-ylethynyl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro- ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.55 (1H, d), 8.29 (2H, s), 7.85 (1H, s), 7.79 (1H, s), 7.74 (1H, s), 7.48 (1H, t), 7.38 (1H, d), 7.29 (1H, d), 7.01 (1H, d), 3.95 (2H, q), 3.59-3.35 (4H, m), 2.92 (3H, s), 2.38-2.25 (2H, m), 2.25-2.11 (2H, m).
472
General Route C. Procedure C2 using 4- ethynyl-1- methyl-piperidin- 4-ol (reaction time 2 hrs)


 


66



   1-(3-{7-[6-(Tetrahydro-pyran-4- ylamino)-pyridazin-3-yl]- imidazo[1,2-a]pyridin-3-yl}- phenyl)-3-(2,2,2-trifluoro-ethyl)- urea bis-hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.98 (1H, d), 8.63 (1H, s), 8.57 (1H, d), 8.37- 8.30 (1H, m), 8.17 (1H, dd), 8.10 (1H, s), 7.74 (1H, d), 7.60 (1H, t), 7.49-7.38 (2H, m), 4.06 (3H, d), 3.96 (2H, q), 3.62 (2H, t), 2.10 (2H, d), 1.84-1.70 (2H, m).
512
General Route B, Procedure Z4 using tetrahydro- pyran-4-ylamine and 3,6- dichloro- pyridazine - heated at 120° C. for 4 hours, Procedure B3d using boronate from Procedure B2—heated in microwave at 85° C. for 45 min, Procedure Z5


 


67



   1-(3-{7-[6-(2-Hydroxy- ethylamino)-pyridazin-3-yl]- imidazo[1,2-a]pyridin-3-yl}- phenyl)-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, DMSO-d6): 7.83 (1H, d), 7.30 (1H, s), 7.15 (1H, d), 7.06-6.90 (3H, m), 6.69 (1H, t), 6.62 (1H, d), 6.52 (1H, d), 6.26 (1H, d), 3.15 (2H, q), 3.01 (2H, t), 2.83 (2H, t)
472
General route B, procedure B3d using 2-(6- Chloro- pyridazin-3- ylamino)-ethanol (prepared using procedure Z6a)


 


68



   N-(2-Diethylamino-ethyl)-2-[4-(3 {3-[3-(2,2,2-trifluoro-ethyl)- ureido]-phenyl}-imidazo[1,2- a]pyridin-7-yl)- pyrazol-1-yl]-isobutyramide
1H NMR (400 MHz, DMSO-d6): 8.95 (1H, s), 8.61 (1H, s), 8.55 (1H, d), 8.21 (1H, s), 7.97 (1H, s), 7.79 (1H, s), 7.71 (1H, s), 7.48-7.31 (3H, m), 7.25 (1H, d), 7.03 (1H, s), 6.84 (1H, t), 4.01-3.90 (2H, m), 3.08 (2H, q), 2.38 (6H, q), 1.77 (6H, s), 0.88 (6H, t).
585
General route A, procedure A5a, procedureZ2 followed by procedure Z6


 


69



   N-Methyl-2-[4-(3-{3-[3-(2,2,2- trifluoro-ethyl)-ureido]-phenyl}- imidazo[1,2-a]pyridin-7-yl)- pyrazol-1-yl]- isobutyramide
1H NMR (400 MHz, Me- d3-OD): 8.60-8.52 (1H, m), 8.42 (1H, s), 8.14-8.07 (1H, m), 7.82 (2H, s), 7.70-7.64 (1H, m), 7.53- 7.36 (2H, m), 7.36-7.27 (2H, m), 3.96 (2H, q), 2.78-2.71 (3H, m), 1.88 (6H, s).
500
General route A, procedure A5a, procedureZ2 followed by procedure Z6 using methylamine


 


70



 N,N-Dimethyl-2-[4-(3-{3-[3- (2,2,2-trifluoro-ethyl)-ureido]- phenyl}-imidazo[1,2-a]pyridin- yl)-pyrazol-1- yl]-isobutyramide
1H NMR (400 MHz, Me- d3-OD): 8.56 (1H, d), 8.42 (1H, s), 8.10 (1H, s), 7.82 (2H, s), 7.71-7.63 (1H, m), 7.48 (1H, t), 7.44-7.26 (3H, m), 3.96 (2H, q), 2.97 (3H, s), 2.55 (3H, s), 1.87 (6H, s).
514
General route A, procedure A5a, procedureZ2 followed by procedure Z6 using dimethylamine


 


71



   N-Cyclopropyl-2-[4-(3-{3-[3- (2,2,2-trifluoro-ethyl)-ureido]- phenyl}-imidazo[1,2-a]pyridin- yl)-pyrazol-1- yl)-isobutyramide
1H NMR (400 MHz, Me- d3-OD): 8.56 (1H, d), 8.39 (1H, s), 8.09 (1H, s), 7.81 (2H, d), 7.67 (1H, s), 7.54- 7.36 (2H, m), 7.31 (2H, d), 3.96 (2H, q), 2.70-2.60 (1H, m), 1.86 (6H, s), 0.77-0.66 (2H, m), 0.55- 0.45 (2H, m).
526
General route A, procedure A5a, procedureZ2 followed by procedure Z6 using cyclopropylamine


 


72



   2-[4-(3-{3-[3-(2,2,2-Trifluoro- ethyl)-ureido]-phenyl}- imidazo[1,2-a]pyridin-7-yl)- pyrazol-1-yl]-isobutyramide
1H NMR (400 MHz, Me- d3-OD): 8.57 (1H, d), 8.47-8.40 (1H, m), 8.12 (1H, s), 7.82 (2H, s), 7.67 (1H, s), 7.49 (1H, t), 7.42- 7.36 (1H, m), 7.35-7.29 (2H, m), 3.96 (2H, q), 1.91 (6H, s).
486
General route A, procedure A5a, procedureZ2 followed by procedure Z6 using ammonia


 


73



   1-(3-{7-[1-(2-Azetidin-1-yl-1,1- dimethyl-2-oxo-ethyl)-1H- pyrazol-4-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.59-8.55 (1H, m), 8.45 (1H, s), 8.15 (1H, s), 7.83 (2H, s), 7.70-7.66 (1H, m), 7.49 (1H, t), 7.41- 7.35 (1H, m), 7.35-7.29 (2H, m), 4.08-4.00 (2H, m), 3.96 (2H, q), 3.48-3.42 (2H, m), 2.14 (2H, t), 1.84 (6H, s).
526
General route A, procedure A5a, procedureZ2 followed by procedure Z6 using azetidine


 


74



   1-(3-{7-[1-(1-Methanesulfonyl- piperidin-4-yl)-1H-pyrazol-4-yl]- imidazo [1,2-a]pyridin-3-yl}-phenyl)-3- (2,2,2-trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.55 (1H, d), 8.32 (1H, s), 8.04 (1H, s), 7.82 (1H, d), 7.77 (1H, s), 7.70- 7.63 (1H, m), 7.53-7.43 (1H, m), 7.39 (1H, d), 7.35-7.23 (2H, m), 4.48- 4.36 (1H, m), 4.02-3.85 (4H, m), 3.10-2.97 (2H, m), 2.97-2.88 (3H, m), 2.34-2.12 (4H, m).
562
General route B, procedure B3a using X13


 


75



   1-(3-{7-[6-(4-Amino-piperidin-1- yl)-pyridazin-3-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea tris- trifluoroacetate
1H NMR (400 MHz, Me- d3-OD): 8.90 (1H, d), 8.59 (1H, s), 8.35 (1H, d), 8.23 (1H, s), 8.20 (1H, d), 8.01 (1H, s), 7.76 (1H, d), 7.57 (1H, t), 7.50 (1H, d), 7.40 (1H, d), 4.62 (2H, d), 3.95 (2H, q), 3.64-3.49 (1H, m), 3.35 (2H, m, obscured) 2.24 (2H, d), 1.87-1.70 (2H, m).
511
General Route B, Procedure Z4 using 3,6- dichloro- pyridazine and piperidin-4-yl- carbamic acid tert-butyl ester— heated at 120° C. overnight, Procedure B3d using boronate from Procedure B2, heated in microwave at 120° C. for 20 min, Procedure Z1b


 


76



   1-(3-{7-[6-(1-Methyl-piperidin-4- ylamino)-pyridazin-3-yl]- imidazo[1,2-a]pyridin-3-yl}- phenyl)-3-(2,2,2-trifluoro-ethyl)- urea tri-hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.97 (1H, d), 8.67 (1H, s), 8.62 (1H, d), 8.33 (1H, s), 8.19 (1H, d), 8.07 (1H, s), 7.80 (1H, d), 7.60 (1H, t), 7.49 (1H, d), 7.42 (1H, d), 4.25 (1H, t), 3.96 (2H, q), 3.71 (2H, d), 3.35 (obscured 2H, m), 3.04- 2.93 (3H, m), 2.44 (2H, d), 2.08 (2H, q).
525
General Route B, Procedure Z4 using 3,6- dichloro- pyridazine and 1-methyl- piperidin-4- ylamine, heated at 120° C. for 2 h, Procedure B3d using boronate from Procedure B2, heated in microwave at 120° C. for 20 min, Procedure Z5


 


77



   1-[3-(6,7-Dimethyl-imidazo[1,2- a]pyridin-3-yl)-phenyl]-3-(2,2,2- trifluoro-ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.39 (1H, s), 8.25 (1H, s), 7.82 (1H, s), 7.71 (1H, s), 7.55-7.45 (2H, m), 7.41 (1H, d), 7.30 (1H, d), 3.95 (2H, q), 2.46 (3H, s), 2.35 (3H, s).
363
General route A, procedure A1 using 2-amino- 4,5- dimethylpyridine followed by procedure A2, A3 and A4 using product from Procedure A2


 


78



   1-[3-(7-Pyridin-3-yl-imidazo[1,2- a]pyridin-3-yl)-phenyl]-3-(2,2,2- trifluoro-ethyl)-urea
1H NMR (DMSO-d6) 9.10 (1H, s), 8.98 (1H, s), 8.67 (1H, d), 8.64 (1H, d), 8.28 (1H, d), 8.14 (1H, s), 7.84 (1H, s), 7.81 (1H, s), 7.53 (1H, dd), 7.44 (3H, m), 7.29 (1H, m), 6.83 (1H, t), 3.96 (2H, m)
410
General route A, procedure A5c using pyridine 3- boronic acid


 


79



   1-(3-{7-[2-(4-Methyl-piperazin-1- yl)-pyrimidin-5-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea bis-formate
1H NMR (400 MHz, Me- d3-OD): 8.79 (2H, s), 8.60 (1H, d), 8.30 (2H, s), 7.84 (1H, s), 7.80 (1H, s), 7.77- 7.66 (1H, m), 7.47 (1H, t), 7.36 (1H, d), 7.28 (2H, t), 4.14 (4H, s), 4.03-3.88 (2H, m), 3.22 (4H, s), 2.86 (3H, s).
511
General Route B, Procedure Z4 using 5-bromo- 2-chloro- pyrimidine and 1-methyl piperazine heated at 120° C. for 3 hours, Procedure B3d using boronate from Procedure B2, heated in microwave at 120° C. for 20 min


 


80



   1-(3-{7-[6-(2-Methoxy- ethylamino)-pyridazin-3-yl]- imidazo[1,2-a]pyridin-3-yl}- phenyl)-3-(2,2,2- trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.61 (1H, d), 8.10 (1H, s), 7.91 (1H, d), 7.86- 7.78 (2H, m), 7.74 (1H, s), 7.48 (1H, t), 7.40 (1H, d), 7.30 (1H, d), 7.05 (1H, d), 3.93 (2H, q), 3.75-3.63 (4H, m), 3.42 (3H, s)
486
General route B, procedure B3d using (6- chloropyridazin- 3-yl)-(2- methoxy-ethyl)- amine (prepared using a procedure analogous to Z6a)


 


81



   1-(3-{7-[6-(2-Hydroxy-1,1- dimethyl-ethylamino)-pyrid-azin- 3-yl]-1,7-dihydro-imidazo[1,2-a] pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.51 (1H, d), 7.98 (1H, s), 7.87-7.70 (2H, m), 7.70-7.54 (2H, m), 7.48- 7.31 (2H, m), 7.24 (1H, d), 6.99 (1H, d), 3.95 (2H, q), 3.77 (2H, s), 1.45 (6H, s)
500
General route B, procedure B3d using 2-(6- chloropyridazin- 3-ylamino)-2- methyl-propan- 1-ol (prepared using a procedure analogous to Z6a)


 


82



   1-{3-[7-(6-Azetidin-1-yl- pyridazin- 3-yl)-imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.95 (1H, d), 8.62 (1H, s), 8.56 (1H, d), 8.31 (1H, s), 8.15 (1H, d), 8.07 (1H, s), 7.70-7.53 (2H, m), 7.47 (1H, d), 7.41 (1H, d), 4.56 (4H, t), 3.96 (2H, q), 2.70 (2H, pent)
468
Procedure Z4 using azetidine


 


83



   1-[3-(7-Pyridin-4-yl-imidazo[1,2- a]pyridin-3-yl)-phenyl]-3-(2,2,2- trifluoro-ethyl)-urea
1H NMR (DMSO-d6) 8.98 (1H, s), 8.67 (3H, m), 8.26 (1H, s), 7.92 (2H, d), 7.88 (1H, s), 7.82 (1H, s), 7.48 (4H, m), 6.87 (1H, t), 3.96 (2H, m)
412
General route A, procedure A5c using 4-(4,4,5,5- tetramethyl- [1,3,2] dioxaborolan- 2-yl)-pyridine


 


84



   1-{3-[7-(3-Amino-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, Me- d3-OD): 8.69 (1H, d), 8.08-7.94 (3H, m), 7.86 (1H, s), 7.84-7.76 (1H, m), 7.54-7.45 (1H, m), 7.45- 7.30 (3H, m), 3.95 (2H, q).
428
General route B, procedure B3a using 2-Amino- 3- Chloropyrazine


 


85



   1-{3-[7-(5-Amino-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea formate
1H NMR (400 MHz, Me- d3-OD): 8.67-8.53 (2H, m), 8.19 (2H, d), 8.09 (1H, s), 7.84 (1H, s), 7.80-7.63 (2H, m), 7.49 (1H, t), 7.45- 7.27 (2H, m), 3.95 (2H, q).
428
General route B, procedure B3a using 2-Amino- 5-Bromo- Pyrazine


 


86



   1-{3-[7-(1-Methyl-1H-pyrazol-3- ylethynyl)-imidazo[1,2-a]pyridin- 3-yl]-phenyl}-3-(2,2,2-trifluoro- ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.58 (1H, d), 8.15 (1H, s), 7.90-7.71 (3H, m), 7.67 (1H, d), 7.49 (1H, t), 7.42 (1H, d), 7.31 (1H, d), 7.09 (1H, d), 6.56 (1H, d), 4.02-3.88 (5H, m).
439
General Route C. Procedure C3 using 3-iodo- 1-methyl-1H- pyrazole, Procedure C2 using 1-methyl- 3- trimethylsilanyl- ethynyl- 1H-pyrazole (reaction time 4.5 hrs)


 


87



   1-(3-{7-[2-(3,3-Difluoro-azetidin- 1-yl)-pyrimidin-5-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea bis- trifluoroacetate
1H NMR (400 MHz, Me- d3-OD): 8.98 (2H, s), 8.85 (1H, d), 8.21 (1H, s), 8.17 (1H, s), 8.03 (1H, s), 7.85 (1H, d), 7.58 (1H, t), 7.46 (1H, d), 7.39 (1H, d), 4.60 (4H, t), 3.95 (2H, q).
504
General Route B, Procedure Z4 using 5-bromo- 2-chloro- pyrimidine and 3,3-difluoro- azetidine hydrochloride heated at 120° C.  for 3 hours, Procedure B3d using boronate from Procedure B2, heated in microwave at 120° C. for  40 min


 


88



   1-[3-(7-Pyridazin-4-yl- imidazo[1,2-a]pyridin-3-yl)- phenyl]-3-(2,2,2-trifluoro-ethyl)- urea formate
1H NMR (400 MHz, DMSO-d6): 9.84 (1H, s), 9.33 (1H, d), 8.99 (1H, s), 8.71 (1H, d), 8.46 (1H, s), 8.24-8.12 (2H, m), 7.92 (1H, s), 7.83 (1H, s), 7.62- 7.57 (1H, m), 7.51-7.43 (2H, m), 7.30 (1H, d), 6.87 (1H, t), 4.00-3.91 (2H, m).
413
General route B, procedure B3a using 4- Bromopyridazine 


 


89



   1-{3-[7-(5-Methoxy-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, DMSO-d6): 9.05 (1H, s), 8.96 (1H, s), 8.70-8.62 (1H, m), 8.45 (1H, s), 8.38 (1H, s), 7.87-7.80 (1H, m), 7.80-7.66 (2H, m), 7.47 (2H, d), 7.29 (1H, d), 6.85 (1H, t), 4.05-3.91 (5H, m).
443
General route B, procedure B3a using 2-bromo- 5- methoxypyrazine


 


90



   1-{3-[7-(6-Methoxy-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea formate
1H NMR (400 MHz, DMSO-d6): 9.08-9.02 (1H, m), 8.99 (1H, s), 8.73-8.65 (1H, m), 8.54 (1H, s), 8.33 (1H, s), 8.19-8.12 (1H, m), 7.89 (1H, s), 7.86-7.76 (2H, m), 7.51-7.42 (2H, m), 7.31 (1H, d), 6.89 (1H, t), 4.08 (3H, s), 4.02-3.89 (2H, m).
443
General route B, procedure B3a using 2-iodo-6- methoxypyrazine


 


91



   1-{3-[7-(5-Methyl-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea formate
1H NMR (400 MHz, Me- d3-OD): 8.67 (1H, d), 8.54 (1H, s), 8.26 (1H, s), 7.94 (1H, d), 7.89-7.75 (3H, m), 7.72 (1H, d), 7.50 (1H, t), 7.42 (1H, d), 7.33 (1H, d), 3.96 (2H, q), 2.43 (3H, s).
426
General Route B. Procedure B3c using 2- bromo-5-methyl- pyridine


 


92



   1-{3-[7-(5-Hydroxymethyl- pyridin-2-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.68 (2H, d), 8.30 (1H, s), 8.20 (1H, s), 8.04 (1H, d), 7.95 (1H, d), 7.84 (1H, s), 7.81 (1H, s), 7.76 (1H, d), 7.50 (1H, t), 7.43 (1H, d), 7.34 (1H, d), 4.74 (2H, s), 3.96 (2H, q).
442
General Route B. Procedure B3c using (6- chloro-pyridin-3- yl)-methanol


 


93



   1-{3-[7-(5-Methyl-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, Me- d3-OD): 9.12 (1H, s), 8.72- 8.59 (2H, m), 8.37 (1H, s), 8.15 (1H, s), 7.89-7.72 (3H, m), 7.49 (1H, t), 7.41 (1H, d), 7.32 (1H, d), 3.96 (2H, q), 2.62 (3H, s)
427
General route B, procedure B3a using 2-Bromo- 5- Methylpyrazine


 


94



   1-(3-{7-[2-(3-Oxo-piperazin-1- yl)-pyrimidin-5-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.99 (2H, s), 8.89- 8.80 (1H, m), 8.18 (2H, d), 8.05 (1H, s), 7.86 (1H, d), 7.58 (1H, t), 7.46 (1H, d), 7.39 (1H, d), 4.50 (2H, s), 4.18 (2H, t), 3.96 (2H, q), 3.49 (2H, t).
511
General Route B, Procedure Z4 using 5-bromo- 2- chloropyrimidine and piperazin-2- one heated at 120° C. for 3 hours, Procedure B3d using boronate from Procedure B2, heated in microwave at 120° C. for 30 min, Procedure Z5


 


95



   1-(3-{7-[6-(3-Oxo-piperazin-1- yl)-pyridazin-3-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea bis- hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.97 (1H, d), 8.66 (1H, s), 8.65-8.57 (1H, m), 8.31 (1H, s), 8.28-8.17 (1H, m), 8.08 (1H, s), 8.02 (1H, d), 7.60 (1H, t), 7.46 (1H, d), 7.42 (1H, d), 4.44 (2H, s), 4.15-4.02 (2H, m), 3.96 (2H, q), 3.63 (2H, t).
511
General Route B, Procedure Z4 using 3,6- dichloro- pyridazine and piperazin-2-one, heated at 120° C. for 3 hours, Procedure B3d using boronate from Procedure B2, heated in microwave at 120° C. for 30 min, Procedure Z5


 


96



   1-{3-[7-(5-Fluoro-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea bis-hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.90 (1H, d), 8.72 (1H, d), 8.63 (1H, s), 8.30 (1H, dd), 8.23 (2H, d), 8.05 (1H, s), 7.90-7.79 (1H, m), 7.59 (1H, t), 7.47 (1H, d), 7.41 (1H, d), 3.96 (2H, q).
430
General Route B, Procedure B3d using boronate from Procedure B2 and 2-chloro-5- fluoro pyridine, heated in microwave at 120° C. for 30 min, Procedure Z5


 


97



   1-{3-[7-(4-Methyl-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea bis-hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.97 (1H, d), 8.73 (1H, d), 8.66 (1H, s), 8.31 (1H, s), 8.23 (1H, s), 8.16 (1H, dd), 8.07 (1H, s), 7.64 (1H, t), 7.59 (1H, d), 7.48 (1H, d), 7.43 (1H, d), 3.96 (2H, q), 2.65 (3H, s).
426
General Route B, Procedure B3d using boronate from Procedure B2 and 2-chloro-5- methylpyridine, heated in microwave at 120° C. for 30 min, Procedure Z5


 


98



   1-{3-[7-(6-Methyl-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea bis-hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.99 (1H, d), 8.67 (1H, s), 8.33 (1H, s), 8.27 (1H, t), 8.18 (1H, d), 8.16- 8.11 (1H, m), 8.08 (1H, s), 7.74 (1H, d), 7.60 (1H, t), 7.48 (1H, d), 7.43 (1H, d), 3.96 (2H, q), 2.83 (3H, s).
426
General Route B, Procedure B3d using boronate from Procedure B2 and 2-chloro-6- methyl pyridine, heated in microwave at 120° C. for 30 min, Procedure Z5


 


99



   1-{3-[7-(6-Ethoxy-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea bis-hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.88 (1H, d), 8.67 (1H, s), 8.29-8.18 (2H, m), 8.06 (1H, s), 7.89 (1H, t), 7.80 (1H, d), 7.59 (1H, t), 7.46 (1H, d), 7.41 (1H, d), 6.95 (1H, d), 4.56 (2H, q), 3.96 (2H, q), 1.49 (3H, t).
456
General Route B, Procedure B3d using boronate from Procedure B2 and 2-chloro-6- ethoxy pyridine, heated in microwave at 120° C. for 30 min, Procedure Z5


 


100



   1-{3-[7-(6-Methyl-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, Me- d3-OD): 9.07 (1H, s), 8.70 (1H, d), 8.50 (1H, s), 8.42 (1H, s), 7.89-7.75 (3H, m), 7.51 (1H, t), 7.43 (1H, d), 7.35 (1H, d), 3.96 (2H, q), 2.67 (3H, s).
427
General route B, procedure B3a using 2-Bromo- 6- Methylpyrazine


 


101



   1-{3-[7-(6-Methoxy-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, Me- d3-OD): 8.66 (1H, d), 8.39 (1H, s), 7.90-7.84 (1H, m), 7.84-7.74 (3H, m), 7.63 (1H, d), 7.50 (1H, t), 7.46- 7.38 (1H, m), 7.38-7.30 (1H, m), 6.82 (1H, d), 4.07 (3H, s), 4.04-3.89 (2H, m).
442
General Route B. Procedure B3c using 2- bromo-6- methoxy- pyridine


 


102



   1-{3-[7-(4-Amino-5-fluoro- pyrimidin-2-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea bis- hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.91 (1H, d), 8.80 (1H, s), 8.41-8.33 (2H, m), 8.29 (1H, s), 8.05 (1H, s), 7.59 (1H, t), 7.47 (1H, d), 7.41 (1H, d), 3.96 (2H, q).
446
General Route B, Procedure B3d using boronate from Procedure B2 and 2-chloro-5- fluoro-pyrimidin- 4-ylamine, heated in microwave at 120° C. for 30 min, Procedure Z5


 


103



   1-{3-[7-(4-Fluoro-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, Me- d3-OD): 8.76-8.62 (2H, m), 8.34 (1H, s), 7.89 (1H, dd), 7.83 (1H, s), 7.82- 7.77 (1H, m), 7.74 (1H, dd), 7.55-7.46 (1H, m), 7.42 (1H, d), 7.33 (1H, d), 7.28-7.18 (1H, m), 3.96 (2H, q).
430
General Route B, Procedure B3d using boronate from Procedure B2 and 2-chloro-4- fluoro pyridine, heated in microwave at 120° C. for 30 min


 


104



   1-{3-[7-(3-Methyl-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea formate
1H NMR (400 MHz, Me- d3-OD): 8.69 (1H, d), 8.51 (1H, d), 8.20 (1H, s), 7.90- 7.73 (4H, m), 7.50 (1H, t), 7.47-7.37 (2H, m), 7.35 (1H, d), 7.24 (1H, d), 3.95 (2H, q), 2.48 (3H, s).
426
General Route B. Procedure B3c using 2- chloro-3-methyl- pyridine


 


105



   1-{3-[7-(5-Hydroxy-pyrazin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.62 (1H, d), 8.25 (1H, s), 8.13 (2H, d), 7.83 (1H, s), 7.73 (1H, s), 7.56- 7.47 (3H, m), 7.41 (1H, d), 7.33 (1H, d), 4.00-3.91 (3H, m), 3.44-3.23 (197H, m).
429
General route B, procedure B3a using 2-bromo- 5-hydroxy- pyrazine


 


106



   1-{3-[7-(6-Amino-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.99 (1H, d), 8.56 (1H, s), 8.35 (1H, s), 8.13- 8.01 (2H, m), 7.93 (1H, d), 7.60 (1H, t), 7.52-7.37 (3H, m), 7.15 (1H, d), 3.96 (2H, q).
427
General Route B. Procedure B3c using 6- bromo-pyridin-2- ylamine. Procedure Z5


 


107



   1-(3-{7-[3-(2-Hydroxy-ethyl)- phenyl]-imidazo[1,2-a]pyridin- yl}-phenyl)-3-(2,2,2-trifluoro- ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.60 (1H, d), 8.29 (1H, s), 7.85 (2H, d), 7.80- 7.68 (1H, m), 7.64 (1H, s), 7.62-7.53 (1H, m), 7.53- 7.42 (2H, m), 7.39 (2H, d), 7.33 (1H, d), 7.28 (1H, d), 3.95 (2H, q), 3.84 (2H, t), 2.93 (2H, t).
455
General Route B, Procedure B3d using boronate from Procedure B2 and 2-(3-bromo- phenyl)-ethanol


 


108



   1-{3-[7-(4-Amino-pyridin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea diformate
1H NMR (400 MHz, Me- d3-OD): 8.73 (1H, d), 8.39 (2H, s), 8.16-8.04 (2H, m), 7.91 (1H, s), 7.87 (1H, s), 7.50 (1H, t), 7.44-7.36 (2H, m), 7.33 (1H, d), 7.19 (1H, s), 6.86-6.77 (1H, m), 3.95 (2H, q).
427
General Route B. Procedure B3c using 2- chloro-pyridin-4- ylamine


 


109



   1-(3-{7-[4-(4-Hydroxy-piperidin- 1-yl)-pyrimidin-2-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2- trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.68-8.55 (2H, m), 8.28 (1H, d), 7.94 (1H, d), 7.81 (2H, d), 7.55-7.38 (2H, m), 7.34 (1H, d), 6.76 (1H, d), 4.33 (2H, s), 4.03- 3.89 (3H, m), 3.52-3.39 (2H, m), 2.00 (2H, s), 1.65-1.50 (2H, m).
512
General route B, procedure B3a 1-(2- Chloropyrimidin- 4-yl)Piperidin-4- ol


 


110



   1-{3-[7-(4-Amino-pyrimidin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea
1H NMR (400 MHz, DMSO-d6): 9.00-8.94 (1H, m), 8.63 (1H, d), 8.49 (1H, s), 8.27-8.20 (1H, m), 7.84 (2H, d), 7.75 (1H, s), 7.54- 7.43 (2H, m), 7.29 (1H, d), 7.06-6.98 (2H, m), 6.86 (1H, t), 6.42 (1H, d), 4.00- 3.90 (2H, m)
428
General route B, procedure B3a using 2-Chloro- 4- Aminopyrimidine


 


111



   1-(3-{7-[4-(2-Hydroxy-ethyl)- phenyl]-imidazo[1,2-a]pyridin- yl}-phenyl)-3-(2,2,2-trifluoro- ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.65 (1H, d), 8.22 (1H, s), 7.86 (2H, s), 7.83- 7.62 (3H, m), 7.56-7.47 (1H, m), 7.41 (4H, d), 7.33 (1H, d), 4.02-3.89 (2H, m), 3.83 (2H, t), 2.91 (2H, t).
455
General Route B, Procedure B3c using boronate from Procedure B2 and 2-(4-chloro- phenyl)-ethanol


 


112



   1-{3-[7-(3,5-Dimethyl-isoxazol-4- ylethynyl)-imidazo[1,2-a]pyridin-3- yl]-phenyl}-3-(2,2,2-trifluoro- ethyl)-urea trifluoroacetate
1H NMR (400 MHz, Me- d3-OD): 8.69 (1H, d), 8.02 (1H, s), 7.96 (1H, s), 7.92 (1H, s), 7.54 (1H, t), 7.46- 7.41 (1H, m), 7.37-7.30 (2H, m), 3.99-3.92 (2H, m), 2.59 (3H, s), 2.39 (3H, s).
454
General Route C. Procedure C3 using 4-iodo- 3,5-dimethyl- isoxazole, Procedure C2 using 3,5- dimethyl-4- trimethylsilanyl- ethynyl-isoxazole (reaction time 4 hrs)


 


113



   1-{3-[7-(6-Dimethylamino- pyridazin-3-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2- trifluoro-ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.66 (1H, d), 8.22 (1H, s), 8.15 (1H, s), 8.03 (1H, d), 7.88-7.80 (2H, m), 7.78 (1H, s), 7.50 (1H, t), 7.43 (1H, d), 7.34 (1H, d), 7.25 (1H, d), 3.96 (2H, q), 3.25 (6H, s).
456
General Route B. Procedure B3c using (6- chloro-pyridazin- 3-yl)-dimethyl- amine


 


114



   1-{3-[7-(Pyrimidin-2-yl)- imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)- urea hydrochloride
1H NMR (400 MHz, DMSO-d6): 9.29 (1H, s), 9.08 (2H, d), 8.90 (1H, d), 8.83 (1H, s), 8.47-8.40 (1H, m), 8.29 (1H, dd), 7.89 (1H, s), 7.66 (1H, t), 7.62-7.52 (2H, m), 7.35 (1H, d), 7.03 (1H, t), 4.00- 3.91 (2H, m).
413
General Route B. Procedure B3d using 2- chloropyrimidine. General modification Z5.









Example 114B
1-[3-(7-Pyrimidin-2-yl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea dimesylate




2-chlororpyrimidine (2.24 g, 19.64 mmol) and 2M Na2CO3 (66 ml, 13.2 mmol) were added to a solution of 1-{3-[7-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea [from procedure B2] (6 g, 13.04 mmol) in DME (66 ml) [reaction degassed by bubbling through nitrogen], followed by tetrakis(triphenylphosphine)palladium (0) (1.5 g, 1.2 mmol). The reaction was heated to 80° C. for 3 h, before being partitioned between water and EtOAc. The organic fraction was dried (MgSO4), filtered and concentrated in vacuo and the residue was purified by preparative HPLC to generate the product as TFA salt (1.8 g).
Product (1.1 g) taken up in CH2 Cl2 (700 ml) then washed with 2M NH4OH (300 ml) some solid formed between the layers filtered off (170 mgs). Aqueous re-extracted with CH2 Cl2 (250 ml), all organics combined and washed with water (100 ml) dried (MgSO4), filtered and concentrated in vacuo to generate the product as free base (0.548 g), both samples added together suspended in methanol (100 ml) treated with methane sulphonic acid (0.226 2 eq) and evaporated down, re-evaporated with CH2 Cl2/MeOH to give a foam (1.45 g) MS:
[M+H]+=413.
Example 115
1-[3-(7-Aminoimidazol[1,2-a]pyridin-3-yl)phenyl]-3-(2,2,2-trifluoroethyl)urea
Step 1:




Prepared using the method described in General Route A Procedure A2. MS: [M+H]+=259.
Step 2:




To a solution of 7-amino-3-iodoimidazo-[1,2,a]pyridine (840 mg, 3.2 mmol) in THF (80 ml) was added diisopropylethylamine (1.4 ml, 8.5 mmol) and ethyl chloroformate (0.36 ml, 3.8 mmol). The reaction was stirred at room temperature for 2 h and the resulting solid separated by filtration and washed with THF to give the product (468 mg) which was used without purification. MS: [M+H]+=331.
Step 3:




To a solution of (3-Iodo-imidazo[1,2-a]pyridin-7-yl)carbamic acid ethyl ester (100 mg, 0.30 mmol) in toluene (0.5 ml) was added 1-[3-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea (described in procedure A4) (126 mg, 0.36 mmol), K2CO3 (250 mg, 1.80 mmol), MeOH (0.5 ml), EtOH (0.5 ml) and water (0.7 ml) [reaction degassed by bubbling N2 through]. Bis(tri-tert-butylphosphine)palladium (0) (1.5 mg, 0.003 mmol) was added and the reaction was heated in a CEM discover microwave synthesizer (300W) at 135° C. for 30 min. The mixture was partitioned between water and EtOAc and the organic fraction was dried (MgSO4), filtered and concentrated in vacuo. The residue was purified by preparative HPLC to give the product (12 mg). MS: [M+H]+=350.
1H NMR (400 MHz, DMSO-d6): 8.97 (1H, s), 8.24 (1H, d), 7.61 (1H, s), 7.40-7.37 (2H, m), 7.33 (1H, s), 7.17-7.09 (1H, m), 6.92 (1H, t), 6.47 (1H, dd), 6.43 (1H, d), 5.71 (2H, s), 4.01-3.88 (2H, m).
Example 116
1-{3-[7-(2-Methylimidazol-1-yl)-1,7-dihydroimidazol[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoroethyl)urea
Step 1:




7-Bromoimidazo-[1,2,a]pyridine was prepared according to the method described in General Route A procedure A1.
Step 2:




7-Bromoimidazo-[1,2,a]pyridine (500 mg, 2.5 mmol), 2-methylimidazole (208 mg, 2.5 mmol), copper (I) iodide (24 mg, 0.13 mmol), trans-N,N′-Dimethyl-cyclohexane-1,2-diamine (360 mg, 0.5 mmol) and cesium carbonate (650 mg, 5 mmol) were dissolved in DMF (5 ml) and heated to 110° C. overnight under an inert atmosphere. The reaction was filtered, concentrated under reduced pressure and the residue purified by column chromatography (5-10% MeOH/DCM) to generate the product (120 mg). MS: [M+H]+=199.
Step 3:




Prepared according to the method described in General Route A Procedure A2.




Step 4:
Prepared according to the method described in General Route B Procedure B3a using the boronate described in General Route A Procedure A4. [M+H]+=415
1H NMR (400 MHz, Me-d3-OD): 8.72 (1H, d), 7.88 (1H, t), 7.82 (1H, s), 7.71 (1H, d), 7.51 (1H, t), 7.45-7.38 (1H, m), 7.38-7.31 (2H, m), 7.12 (1H, dd), 7.05 (1H, d), 4.02-3.88 (2H, m), 2.49 (3H, s).
Example 117
1-[5-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-thiazol-2-yl]-3-ethyl-urea hydrochloride
Step 1:




A mixture of the iodide (From Procedure A2, 1.06 g, 3.81 mmol), palladium acetate (catalytic amount), DavePhos (catalytic amount), cesium carbonate (1.86 g, 5.71 mmol), pivalic acid (583 mg, 5.71 mmol), dimethylacetamide (20 ml) and 2-acetamidothiazole (1.56 g, 9.52 mmol) was heated to 110° C. under nitrogen overnight. The reaction was then allowed to cool. The reaction was filtered under suction washing with ethyl acetate and water. These solids were discarded and the liquors were re-filtered to furnish some crude product. The liquors were taken; the ethyl acetate layer separated and was washed with 10% aqueous lithium chloride and brine. This solution was dried (MgSO4) and concentrated in vacuo. The residue was triturated with dichloromethane to furnish the desired product (500 mg). MS: [M+H]+=293.
1H NMR (400 MHz, DMSO-d6): 12.35 (1H, s), 8.56 (1H, d), 7.91-7.81 (3H, m), 7.08 (1H, dd), 2.20 (3H, s).
Step 2:




A mixture of the acetamide (200 mg, 0.685 mmol), methanol (3 ml) and concentrated hydrochloric acid (1 ml) was heated in a sealed tube in a microwave to 100° C. for 10 minutes. The solution was concentrated to dryness to furnish the crude amine as a tan solid (210 mg). MS: [M+H]+=251.
Step 3:




A mixture of the amine (75 mg crude), ethyl isocyanate (200u1) and 1,4-dioxane (2 ml) was stirred at room temperature for 2 hours before the temperature was raised to 40° C. After 2 hours at this temperature, a further portion of ethyl isocyanate (100u1) was added and the reaction was left at this temperature overnight. The reaction was allowed to cool before addition of water (5 ml). The reaction was heated to 40° C. for 1 hour then the reaction was allowed to cool and dichloromethane was added. The organic layer was separated, washed with water and brine, dried (MgSO4) and concentrated. The residue was purified on silica Biotage column eluting 0-10% methanol/dichloromethane and purified further by preparative HPLC. The hydrochloride salt was formed using the method described in Procedure Z5. Yield=2 mg. MS: [M+H]+=322
1H NMR (400 MHz, Me-d3-OD): 8.76 (1H, d), 8.31 (1H, s), 8.16 (1H, d), 7.90 (1H, s), 7.63 (1H, dd), 3.35 (obscured, 2H), 1.22 (3H, t).
Example 118
1-{3-[7-(5,6-Dimethyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
Step 1:




A mixture of the hydrazide (Chezal J M et. al. Tetrahedron 2002, 58(2), 295-308, 705 mg, 4.0 mmol), diacetyl (379 mg, 4.4 mmol) and ethanol (10 ml) was stirred at room temperature overnight. Ammonia in methanol (2M, 10 ml) was then added and after stirring for 30 minutes was heated to 110° C. in a seal tube in a microwave for 70 minutes. The reaction was then filtered to remove a while solid. The liquors were concentrated and purified on a silica Biotage column eluting with 0-10% methanol/dichloromethane. The product was further purified by trituration with diethyl ether to furnish the product as an off-white solid (277 mg). MS: [M+H]+=226.
Step 2:




Prepared using the method described in General Route A Procedure A2. MS: [M+H]+=338.
Step 3:




Prepared using the method described in General Route A Procedure A4 under conventional heating at 80° C. overnight. The product was purified by silica Biotage column eluting 0-15% ethyl acetate/petroleum ether. The product was salted using the method described in Procedure Z5. MS: [M+H]+=442.
1H NMR (400 MHz, Me-d3-OD): 9.02 (1H, s), 8.99 (1H, d), 8.57 (1H, d), 8.32 (1H, s), 8.06 (1H, s), 7.60 (1H, t), 7.49 (1H, d), 7.43 (1H, d), 3.96 (2H, q), 2.81 (3H, s), 2.74 (3H, s).
Examples 119 to 125
By following the methods described above, the compounds set out in the Table below were prepared.
All MS Data is [M+H]+














Eg.
Compound and Name
N.M.R. Data
M.S
Procedure







119



   [3-(7-Chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-urea
1H NMR (400 MHz, DMSO-d6): 8.71 (1H, s), 8.54 (1H, d), 7.83 (1H, s), 7.75 (1H, s), 7.71 (1H, s), 7.49-7.35 (2H, m), 7.18 (1H, d), 7.03 (1H, dd), 5.92 (2H, s).
287
Procedure E4 using 2N NH3 in MeOH


 


120



   1-{3-[7-(4-Dimethylamino-pyrimidin-2-yl)-imidazo[1,2- a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 9.05 (1H, d), 8.87 (1H, s), 8.42 (1H, s), 8.34 (1H, d), 8.29-8.20 (1H, m), 8.11 (1H, s), 7.60 (1H, t), 7.51-7.38 (2H, m), 7.12 (1H, d), 3.96 (2H, q), 3.65- 3.39 (6H, m).
456
General Route B. Procedure B3c using (2- chloro-pyrimidin- 4-yl)-dimethyl-amine


 


121



   1-(3-{7-[2-(3-Methyl-3H-imidazol-4-yl)-ethyl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.50 (1H, d), 7.79 (1H, s), 7.63 (1H, s), 7.55 (1H, s), 7.51-7.34 (3H, m), 7.28 (1H, d), 6.94 (1H, d), 6.75 (1H, s), 3.95 (2H, q), 3.65 (3H, s), 3.15-2.98 (4H, m).
443
General Route C. Procedure C2 using 5- ethynyl-1-methyl-1H- imidazoleol (reaction time 5 hrs), procedure G


 


122



   1-(3-{7-[5-(2-Hydroxy-ethyl)-pyridin-2-yl]-imidazo[1,2- a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea
1H NMR (400 MHz, Me- d3-OD): 8.61 (1H, d), 8.56 (1H, s), 8.24 (1H, s), 8.17 (1H, s), 7.92 (1H, d), 7.81 (3H, d), 7.76-7.66 (1H, m), 7.46 (1H, t), 7.39 (1H, d), 7.28 (1H, d), 3.95 (2H, q), 3.84 (2H, t), 2.90 (2H, t).
456
General Route B, Procedure B3c using boronate from Procedure B2 and X14


 


123



   1-{5-[7-(1-Azetidin-3-yl-1H-pyrazol-4-yl)-imidazo[1,2- a]pyridin-3-yl]-pyridin-3-yl}-3-(2,2,2-trifluoro-ethyl)-urea formate
1H NMR (400 MHz, Me- d3-OD): 8.63-8.51 (2H, m), 8.51-8.43 (1H, m), 8.43-8.36 (1H, m), 8.33 (2H, s), 8.29 (1H, s), 8.23 (1H, s), 7.82 (2H, s), 7.32 (1H, dd), 5.57-5.44 (1H, m), 4.60 (4H, d), 3.97 (2H, q).
457
General route B: procedure A1; A2; A4 using conditions in procedure B3d (substitutingPdC I2(PPh3)2 for Pd(PPh3)4 and 1-[5-(4,4,5,5-tetramethyl- [1,3,2]dioxaborolan-2-yl)- pyridin-3-yl]-3-(2,2,2- trifluoro-ethyl)-urea from procedure D4; B2, procedure B3c using 1- azetidin-3-yl-4-bromo- 1H-pyrazole prepared using conditions in procedure X3 (step 1 & 2)


 


124



   1-{3-[7-(5-Amino-pyridin-2-yl)-imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 8.98 (1H, d), 8.50 (1H, s), 8.33 (1H, s), 8.30- 8.19 (2H, m), 8.10-8.06 (1H, m), 8.00-7.91 (1H, m), 7.81 (1H, dd), 7.60 (1H, t), 7.51-7.37 (2H, m), 3.95 (2H, q).
427
General Route B. Procedure B3c using 6- chloro-pyridin-3-ylamine


 


125



   1-{3-[7-(3-Amino-pyridin-2-yl)-imidazo[1,2-a]pyridin-3-yl]- phenyl}-3-(2,2,2-trifluoro-ethyl)-urea hydrochloride
1H NMR (400 MHz, Me- d3-OD): 9.05 (1H, d), 8.45 (1H, s), 8.39 (1H, s), 8.18 (1H, dd), 8.14-8.07 (1H, m), 7.93 (1H, dd), 7.86- 7.75 (2H, m), 7.61 (1H, t), 7.51-7.38 (2H, m), 3.96 (2H, q).
427
General Route B. Procedure B3c using 2- chloro-pyridin-3-ylamine









Examples 126A-159B
The following compounds can be prepared using the methods described herein. In particular the appropriate coupling partner such as the required aromatic halide or aromatic boronic acid will be used in the cross-coupling reaction with 1-[3-(7-chloro-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea or 1-[3-(7-boronate-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea. The required coupling partners are commercially available or can be synthesised using the methods described herein.
Example 126A
1-(3-{7-[1-(2-Hydroxy-ethyl)-6-oxo-1,6-dihydro-pyridazin-3-yl]-imidazol[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 126B
Example 126B was prepared in accordance with the procedure set out in the Table below.

















Chemical
Route/
NMR Data
MS


Eg.
Structure
name
Method
(solvent)
Data







126B




1-(3-{7-[1-(2- Hydroxy- ethyl)-6-oxo- 1,6-dihydro- pyridazin-3-yl]- imidazo-[1,2- a]pyridin-3-yl}- phenyl)-3- (2,2,2- trifluoroethyl)- urea hydrochloride
General Route B followed by procedure B3d using 6-chloro-2- (2-chloro- ethyl)-2H- pyridazin- 3-one
(Me-d3-OD): 8.88 (1H, d), 8.47 (1H, s), 8.33-8.19 (2H, m), 8.14 (1H, d), 8.01 (1H, s), 7.57 (1H, t), 7.49 (1H, d), 7.39 (1H, d), 7.19 (1H, d), 4.46 (2H, t), 4.05 (2H, t), 3.95 (2H, q)
473









Example 127A
1-(3-{7-[1-(2-Amino-ethyl)-6-oxo-1,6-dihydro-pyridazin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 128A
1-(3-{7-[1-(2-Methoxy-ethyl)-6-oxo-1,6-dihydro-pyridazin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 129A
1-(3-{7-[1-(2-Methylamino-ethyl)-6-oxo-1,6-dihydro-pyridazin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 130A
1-(3-{7-[6-(Piperidin-4-yloxy)-pyridazin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 130B
Example 130B was prepared in accordance with the procedure set out in the Table below.

















Chemical
Route/
NMR Data
MS


Eg.
Structure
name
Method
(solvent)
Data







130B




1-(3-{7-[6- (Piperidin-4- yloxy)- pyridazin-3-yl]- imidazo[1,2- a]pyridin-3-yl}- phenyl)-3- (2,2,2- trifluoroethyl)- urea hydrochloride
General route B: procedure B1, procedure B2, procedure B3c using 3-chloro- 6-(piperidin-4- yloxy)- pyridazine, procedure Z5
(Me-d3-OD): 8.96 (1H, d), 8.65 (1H, s), 8.43 (1H, d), 8.33-8.23 (2H, m), 8.08 (1H, s), 7.60 (1H, t), 7.51- 7.37 (3H, m), 5.74-5.65 (1H, m), 3.96 (2H, q), 3.55-3.46 (2H, m), 2.46-2.33 (2H, m), 2.30- 2.17 (2H, m), 2.06-1.98 (1H, m), 1.29-1.18 (1H, m).
512









Example 131A
1-(3-{7-[6-(Piperidin-3-yloxy)-pyridazin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 131B
Example 131B was prepared in accordance with the procedure set out in the Table below.

















Chemical
Route/
NMR Data
MS


Eg.
Structure
name
Method
(solvent)
Data







131B




1-(3-{7-[6- (Piperidin-3- yloxy)- pyridazin-3-yl]- imidazo[1,2- a]pyridin-3-yl}- phenyl)-3- (2,2,2-trifluoro- ethyl)-urea hydrochloride
General route B: procedure B1, procedure B2, procedure B3c using 3-chloro- 6-(piperidin-3- yloxy)- pyridazine, procedure Z5
(Me-d3-OD): 8.96 (1H, d), 8.67 (1H, s), 8.47 (1H, d), 8.34-8.23 (2H, m), 8.12-8.03 (1H, m), 7.60 (1H, t), 7.55-7.45 (2H, m), 7.42 (1H, d), 5.80 (1H, s), 3.96 (2H, q), 3.74-3.60 (1H, m), 3.60-3.47 (1H, m), 3.47- 3.35 (2H, m), 3.28-3.16 (1H, m), 2.32-2.07 (3H, m), 1.99- 1.87 (1H, m).
512









Example 132A
1-{3-[7-(6-Methylamino-pyridazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 132B
Example 132B was prepared in accordance with the procedure set out in the Table below.

















Chemical
Route/
NMR Data
MS


Eg.
Structure
name
Method
(solvent)
Data







132B




1-{3-[7-(6- Methylamino- pyridazin-3-yl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2- trifluoroethyl)- urea formate
General route B: B1, B2, B3c using (6-chloro- pyridazin-3-yl)- methyl-amine
(Me-d3-OD): 8.98 (1H, d), 8.63 (1H, s), 8.56 (1H, d), 8.34 (1H, s), 8.17 (1H, dd), 8.10 (1H, s), 7.79-7.71 (1H, m), 7.60 (1H, t), 7.49-7.38 (2H, m), 3.96 (2H, q), 3.21 (3H, s).
442









Example 133A
1-(3-{7-[6-(3-Hydroxy-piperidin-1-yl)-pyridazin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 133B
Example 1338 was prepared in accordance with the procedure set out in the Table below.

















Chemical
Route/
NMR Data
MS


Eg.
Structure
name
Method
(solvent)
Data







133B




1-(3-{7-[6-(3- Hydroxy- piperidin-1-yl)- pyridazin-3-yl]- imidazo[1,2- a]pyridin-3-yl}- phenyl)-3- (2,2,2-trifluoro- ethyl)-urea hydrochloride
General route B: B1, B2, procedure B3c using 1-(6- bromo- pyridazin-3-yl)- piperidin-3-ol, procedure Z5
(Me-d3-OD): 8.95 (1H, d), 8.63 (1H, s), 8.55 (1H, d), 8.30 (1H, s), 8.18 (1H, d), 8.07 (2H, d), 7.59 (1H, t), 7.44 (2H, dd), 4.06 (1H, s), 4.02-3.87 (5H, m), 3.86-3.74 (1H, m), 2.16- 1.98 (2H, m), 1.90-1.72 (2H, m).
512









Example 134A
1-{3-[7-(4-Methyl-pyridazin-3-yl)-imidazol[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 135A
1-{3-[7-(6-Chloro-5-methyl-pyridazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 135B
Example 135B was prepared in accordance with the procedures set out in the Table below.


















Route/
NMR Data
MS


Eg.
Structure
Chemical name
Method
(solvent)
Data




















135B




1-{3-[7-(6- Chloro-5- methyl- pyridazin-3-yl)- imidazo-[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2- trifluoroethyl)- urea trifluoro- acetate
General Route B in step B3d used 3,6- dichloro-4- methyl- pyridazine
(Me-d3-OD): 8.96 (1H, d), 8.74 (1H, s), 8.45 (1H, s), 8.28 (2H, d), 8.04 (1H, s), 7.58 (1H, t), 7.48 (1H, d), 7.41 (1H, d), 3.95 (2H, q), 2.60 (3H, s).
461









Example 136A
1-{3-[7-(6-Chloro-4-methyl-pyridazin-3-yl)-imidazol[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 136B
Example 136B was prepared in accordance with the procedures set out in the Table below.


















Route/
NMR Data
MS


Eg.
Structure
Chemical name
Method
(solvent)
Data




















136B




1-{3-[7-(6- Chloro-4- methyl- pyridazin-3-yl)- imidazo-[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2- trifluoroethyl)- urea trifluoro- acetate
General Route B in step B3d used 3,6- dichloro-4- methyl- pyridazine
(Me-d3-OD): 8.97 (1H, d), 8.30 (2H, s), 8.06 (1H, s), 7.94 (1H, s), 7.81 (1H, d), 7.59 (1H, t), 7.48 (1H, d), 7.43 (1H, d), 3.95 (2H, q), 2.54 (3H, s).
461









Example 137A
1-{3-[7-(5-Methyl-pyridazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 137B
Example 1378 was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data
MS


Eg.
Structure
Chemical name
Method
(solvent)
Data







137B




1-{3-[7-(5- Methyl- pyridazin-3-yl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2-trifluoro- ethyl)-urea hydrochloride
General Route B in step B3c used 3-chloro-5- methylpyridazine
(Me-d3-OD): 9.48 (1H, s), 9.03 (1H, d), 8.83 (1H, s), 8.81 (1H, s), 8.36 (1H, s), 8.31 (1H, dd), 8.09 (1H, s), 7.61 (1H, t), 7.53-7.46 (1H, m), 7.44 (1H, d), 3.96 (2H, q), 2.71 (3H, s).
427









Example 138A
1-{3-[7-(5-Methoxy-pyrimidin-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2 ,2-trifluoro-ethyl)-urea




Example 138B
Example 138B was prepared in accordance with the procedure set out in the Table below.

















Chemical 
Route/
NMR Data 
MS 


Eg.
Structure
name
Method
(solvent)
Data







138B




1-{3-[7-(5- Methoxy- pyrimidin-2-yl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2-trifluoro- ethyl)-urea
General route B: B1, B2, procedure B3d using 2-chloro- 5-methoxy- pyrimidine (MW irradiation)
(Me-d3-OD): 8.66 (1H, d), 8.62 (3H, s), 8.04 (1H, dd), 7.88-7.83 (1H, m), 7.82 (1H, s), 7.51 (1H, t), 7.47- 7.40 (1H, m), 7.34 (1H, d), 4.04 (3H, s), 3.96 (2H, q).
443









Example 139A
1-{3-[7-(2-Chloro-5-methoxy-pyrimidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 139B
Example 139B was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







139B




1-{3-[7-(2- Chloro-5- methoxy- pyrimidin-4-yl)- imidazo-[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2- trifluoroethyl)- urea
General Route B followed by procedure B3d using 2,4-dichloro-5- methoxypyrimidine.
(Me-d3-OD): 8.56 (3H, d), 7.78 (3H, s), 7.46 (1H, t), 7.42-7.32 (1H, m), 7.28 (1H, d), 4.13 (3H, s), 3.96 (3H, q).
477









Example 140A
1-{3-[7-(5-Methoxy-pyrimidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2 ,2-trifluoro-ethyl)-urea




Example 140B
Example 140B was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







140B




1-{3-[7-(5- Methoxy- pyrimidin-4-yl)- imidazo-[1,2- a]pyridin-3-yl]- phenyl}-3-(2,2,2- trifluoroethyl)- urea hydrochloride
General Route B followed by B3d using 2,4- dichloro-5- methoxy- pyrimidine, then procedure G.
(Me-d3-OD): 9.02 (1H, s), 8.97-8.85 (3H, m), 8.42 (1H, d), 8.30 (1H, s), 8.07 (1H, s), 7.60 (1H, t), 7.47 (1H, d), 7.42 (1H, d), 4.22 (3H, s), 3.96 (2H, q).
443









Example 141A
1-[3-(7-[1,2,4]-Triazin-3-yl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea




The title compound could be prepared by routes described herein or using the reagents laid out below:




Example 141B
Example 141B was prepared in accordance with the procedure set out below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







141B




1-[3-(7- [1,2,4]Triazin-3- yl-imidazo[1,2- a]pyridin-3-yl)- phenyl]-3-(2,2,2- trifluoro-ethyl)- urea
Set out  below
(Me-d3-OD & CDCl3): 9.26 (1H, d), 8.91- 8.80 (2H, m), 8.67 (1H, d), 8.16-8.04 (2H, m), 7.85 (2H, d), 7.48 (1H, t), 7.39 (1H, d), 7.30 (1H, d), 3.91 (2H, q).
414









Example 141B
Process for preparing 1-[3-(7-[1,2,4]-Triazin-3-yl-imidazo[1,2-a]pyridin-3-yl-Phenyl]-3-(2,2,2-trifluoro-ethyl)-urea
Step (a) Imidazo[1,2-a]pyridine-7-carboxylic acid amide




Prepared as described in procedure A1 using 2-aminoisonicotinamide MS: [M+H]+162.
Step (b) Imidazo[1,2-a]pyridine-7-carbonitrile




To a solution of Imidazo[1,2-a]pyridine-7-carboxylic acid amide (38 mg, 0.24 mmol) and triethylamine (0.066 ml, 0.47 mmol) in CH2Cl2 (5 ml) was added trifluoroacetic anhydride (0.39, 2.83 mmol) dropwise. The reaction mixture was stirred at room temperature for 2 h before the crude mixture was loaded onto a SCX SPE cartridge, washing with MeOH and eluting with the product with 2M NH3/MeOH. Removal of solvent in vacuo afforded the title compounds (32 mg). MS: [M+H]+143.
Step (c) Imidazo[1,2-a]pyridine-7-carboximidic Acid Methyl Ester Hydrochloride




Hydrogen chloride gas was bubbled through a mixture of imidazo[1,2-a]pyridine-7-carbonitrile (1.0 g, 7.0 mmol), methanol (10 ml) and ether (25 ml) at room temperature for 3 minutes. The resultant mixture was stirred for 3 hours. The solid material was isolated by filtration and was washed with diethyl ether to furnish a 80% pure tan solid (1.7 g). MS:
[M+H]+176
Step (d) Imidazo[1,2-a]pyridine-7-carboximidic Acid, Hydrazide




Hydrazine hydrate (80% in water, 0.25 ml, 2 equiv) was added to a mixture of imidazo[1,2-a]pyridine-7-carboximidic acid methyl ester hydrochloride (1.0 g, 4.7 mmol, 1 equiv) in methanol (30 ml). The mixture was heated to 70 deg C. for 1 hour then allowed to cool to room temperature. After leaving to stand overnight, any solid was removed by vacuum filtration and the solution was concentrated in vacuo and re-concentrated from methanol and was used crude without further purification in the cyclisation step
Step (e) 7-[1,2,4]Triazin-3-yl-imidazo[1,2-a]pyridine




To half the material from step d (ca. 2.3 mmol) was added glyoxal (40% in water, 1 ml) and ethanol (15 ml) and the mixture heated to 100 deg C. After 1 hour the reaction was allowed to cool and was concentrated in vacuo. Water and dichloromethane was added and the mixture filtered under suction. The organic liquors were discarded and the aqueous layer was basified with 2N sodium hydroxide solution. To this was added dichloromethane and the mixture was again filtered under suction. The dichloromethane layer was separated and concentrated to furnish 289 mg of a yellow solid (80% clean). MS: [M+H]+198
Step (f) 3-Iodo-7-[1,2,4]triazin-3-yl-imidazo[1,2-a]pyridine




7-[1,2,4]Triazin-3-yl-imidazo[1,2-a]pyridine (280 mg) was iodinated according to Procedure A2 to furnish the title compound (96 mg). MS: [M+H]+324
Step (g) 1-[3-(7-[1,2,4]Triazin-3-yl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea




3-Iodo-7-[1,2,4]triazin-3-yl-imidazo[1,2-a]pyridine (96 mg, 0.3 mmol) and 1-[3-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea were coupled according to procedure D4 to furnish the title compound as a yellow solid (39 mg). 1H NMR (400 MHz, Me-d3-OD & CDCl3): 9.26 (1H, d), 8.91-8.80 (2H, m), 8.67 (1H, d), 8.16-8.04 (2H, m), 7.85 (2H, d), 7.48 (1H, t), 7.39 (1H, d), 7.30 (1H, d), 3.91 (2H, q). MS: [M+H]+414
Example 142A
1-{3-[7-(5-Methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




The title compound could be prepared by routes described herein or using the reagents laid out above but using pyruvic aldehyde in place of glyoxal.
Example 142B
Example 142B was prepared in accordance with the procedure set out below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







142B




1-{3-[7-(5- Methyl- [1,2,4]triazin-3- yl)-imidazo[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2-trifluoro- ethyl)-urea
Set out below
(DMSO-d6): 9.34 (1H, s), 8.99 (1H, s), 8.74 (1H, d), 8.67 (1H, s), 7.98 (1H, d), 7.93 (1H, s), 7.79 (1H, s), 7.55-7.43 (2H, m), 7.31 (1H, d), 6.87 (1H, t), 3.99- 3.88 (2H, m), 2.65 (3H, s).
428









Example 142B
Process for preparing 1-{3-[7-(5-Methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea
Step (a): Methyl imidazo[1,2-a]pyridine-7-carboxylate




To a solution of Methyl 2-aminopyridine-4-carboxylate (10.0 g, 66 mmol, 1.0 equiv) in EtOH (150 ml) was added NaHCO3 (11.1 g, 132 mmol, 2.0 equiv) followed by chloroacetaldehyde (13.0 ml, 99 mmol, 1.5 equiv). The mixture was refluxed for 2 h. Solvents were removed under reduced pressure and the crude mixture was partitioned between water and EtOAc. The resulting precipitate was washed with Et2O and recrystallised from MeOH/Et2O to afford 8.4 g of product. 1H NMR (400 MHz, DMSO-d6): 8.66 (1H, d), 8.16 (2H, s), 7.80 (1H, s), 7.33 (1H, d), 3.90 (3H, s). MS: [M+H]+177.
Step (b) Imidazo[1,2-a]pyridine-7-carboxylic Acid Hydrazide




To a suspension of methyl-3-Iodo-imidazo[1,2-a]pyridine-7-carboxylate (0.3 g, 1.7 mmol, 1.0 equiv) in ethanol (3 ml) was added hydrazine hydrate (0.414 ml, 8.52 mmol). The mixture was heated to 70 deg C. for 1 h then allowed to cool. The solid was filtered off and washed with ethyl acetate and ether then dried to afford 0.209 g of product. 1H NMR (400 MHz, DMSO-d6): 9.95 (1H, s), 8.60 (1H, d), 8.05 (2H, d), 7.70 (1H, d), 7.30 (1H, dd), 4.58 (2H, s).
Step (c) 7-(5-Methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridine




A suspension of imidazo[1,2-a]pyridine-7-carboxylic acid hydrazide (705 mg, 4.0 mmol, 1.0 equiv) and pyruvic aldehyde (40 wt % in water, 0.8 ml) in ethanol (10 ml) was stirred at room temperature for 2.5 hours. Ammonia (2M in methanol, 10 ml) was added and stirred at room temperature for 15 minutes before heating to 100 deg C. in a microwave for 60 minutes. The reaction mixture was concentrated in vacuo and dichloromethane was added. After stirring at room temperature for 15 minutes the solid (recovered starting material) was filtered off and the liquors were purified by column chromatography (0-10% methanol/dichloromethane) furnishing 200 mg of a yellow solid. MS: [M+H]+212
Step (d) 3-Iodo-7-(5-methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridine




7-(5-Methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridine (200 mg, 0.9 mmol, 1 equiv) and N-iodosuccinamide (300 mg, 1.3 mmol, 1.4 equiv) in dimethylformamide (5 ml) was stirred at room temperature. After 3 hours diethyl ether was added and the resultant solid was isolated by vacuum filtration furnishing 120 mg of a yellow solid. MS: [M+H]+338
Step (e) 1-{3-[7-(5-Methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




3-Iodo-7-(5-methyl-[1,2,4]triazin-3-yl)-imidazo[1,2-a]pyridine (120 mg, 0.4 mmol, 1 equiv) and 1-[3-(4,4,5,5-Tetramethyl-[1,3,2]dioxaborolan-2-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea were coupled according to procedure D4 to furnish the title compound as a yellow solid (85 mg). 1H NMR (400 MHz, DMSO-d6): 9.34 (1H, s), 8.99 (1H, s), 8.74 (1H, d), 8.67 (1H, s), 7.98 (1H, d), 7.93 (1H, s), 7.79 (1H, s), 7.55-7.43 (2H, m), 7.31 (1H, d), 6.87 (1H, t), 3.99-3.88 (2H, m), 2.65 (3H, s). MS: [M+H]+428
Example 143A
1-(3-{7-[6-(Piperidin-4-yloxy)-Pyridin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 144A
1-(3-{7-[6-(3-Dimethylamino-propoxy)-pyridin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 144B
Example 144B was prepared in accordance with the procedure set out in the table below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







144B




1-(3-{7-[6-(3- Dimethylamino- propoxy)- pyridin-3-yl]- imidazo[1,2- a]pyridin-3-yl}- phenyl)-3-(2,2,2- trifluoro-ethyl)- urea hydrochloride
General route A: A1, A2, A3, A4, A5a using dimethyl-{3-[5- (4,4,5,5- tetramethyl- [1,3,2]- dioxaborolan-2- yl)-pyridin-2- yloxy]-propyl}- amine, procedure Z5
(DMSO-d6): 9.66 (1H, s), 8.86-8.77 (2H, m), 8.43 (1H, s), 8.35 (1H, dd), 8.29 (1H, s), 7.92 (2H, s), 7.60-7.49 (2H, m), 7.36-7.21 (2H, m), 7.05 (1H, d), 4.03- 3.87 (2H, m), 3.28-3.13 (2H, m), 2.78 (7H, d), 2.20 (2H, s).
513









Example 145A
1-(3-{7-[6-(4-Acetyl-piperazin-1-yl)-pyridin-3-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 145B
Example 145B was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







145B




1-(3-{7-[6-(4- Acetyl- piperazin-1-yl)- pyridin-3-yl]- imidazo[1,2- a]pyridin-3-yl}- phenyl)-3- (2,2,2-trifluoro- ethyl)-urea hydrochloride
General route A: A1, A2, A3, A4, and A5a using 1- {4-[5-(4,4,5,5- tetramethyl- [1,3,2]- dioxaborolan-2- yl)-pyridin-2-yl]- pipera-zin-1-yl}- ethanone, procedure Z5
(Me-d3-OD): 8.92 (1H, d), 8.67-8.56 (2H, m), 8.36 (1H, s), 8.25 (1H, s), 8.06 (1H, s), 7.95-7.85 (1H, m), 7.67-7.53 (2H, m), 7.47 (1H, d), 7.40 (1H, d), 4.02-3.87 (10H, m), 2.21 (3H, s).
538









Example 146A
1-{3-[7-(3-Amino-5-chloro-pyridin-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 146B
Example 146B was prepared in accordance with the procedure set out in the table below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







146B




1-{3-[7-(3- Amino-5-chloro- pyridin-2-yl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-3-(2,2,2- trifluoroethyl)- urea formate
General Route B in step B3d used 2,5- dichloro-pyridin- 3-ylamine
(Me-d3-OD): 8.66 (1H, d), 8.17 (1H, s), 7.98 (1H, s), 7.92 (1H, d), 7.85 (1H, s), 7.80 (1H, s), 7.54-7.44 (1H, m), 7.43-7.34 (2H, m), 7.34- 7.24 (2H, m), 3.95 (2H, q).
461









Example 147A
1-{3-[7-(4-piperazin-1-yl-pyridin-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 148A
1-{3-[7-(4,6-Dimethyl-pyridin-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 148B
Example 148B was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data 
MS 


Eg.
Structure
Chemical name
Method
(solvent)
Data







148B




1-{3-[7-(4,6- Dimethyl- pyridin-2-yl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-3-(2,2,2- trifluoro-ethyl)- urea formate
General route B: B1, procedure B2, procedure B3d using 2-chloro- 4,6-dimethyl- pyridine
(Me-d3-OD): 8.67 (1H, d), 8.27 (1H, s), 8.18 (1H, s), 7.90-7.84 (1H, m), 7.82 (1H, s), 7.75(1H, dd), 7.67 (1H, s), 7.51 (1H, t), 7.43 (1H, d), 7.34 (1H, d), 7.16 (1H, s), 3.96 (2H, q), 2.59 (3H, s), 2.45 (3H, s).
440









Example 149A




Example 149B
Example 149B was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data
MS


Eg.
Structure
Chemical name
Method
(solvent)
Data







149B




Methyl-[3- methyl-5-(3-{3- [3-(2,2,2- trifluoro-ethyl)- ureido]-phenyl}- imidazo[1,2- a]pyridin-7-yl)- pyridin-2-yl]- carbamic acid tert-butyl ester
General route A: A1, A2, A3, A4, A5a using methyl-[3-methyl- 5-(4,4,5,5- tetramethyl- [1,3,2]- dioxaborolan-2- yl)-pyridin-2-yl]- carbamic acid tert-butyl ester
(Me-d3-OD): 8.76-8.64 (2H, m), 8.19 (1H, s), 7.97 (1H, s), 7.85 (1H, s), 7.77 (1H, s), 7.50 (1H, t), 7.40 (2H, d), 7.33 (1H, d), 3.96 (2H, q), 3.25 (3H, s), 2.38 (3H, s), 1.47 (9H, s).
555









Example 150A
1-{3-[7-(2-Methoxy-pyridin-3-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 150B
Example 150B was prepared in accordance with the procedures set out in the Table below.


















Route/
NMR Data
MS


Eg.
Structure
Chemical name
Method
(solvent)
Data







150B




1-{3-[7-(2- Methoxy- pyridin-3-yl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-3- (2,2,2-trifluoro- ethyl)-urea formate
General Route B in step B3c used 2-methoxy-3- (4,4,5,5- tetramethyl- [1,3,2]- dioxaborolan-2-yl pyridine
(Me-d3-OD): 8.60 (1H, d), 8.26-8.19 (1H, m), 8.16 (1H, s), 7.96-7.88 (2H, m), 7.86 (1H, s), 7.80 (1H, s), 7.48 (1H, t), 7.43-7.34 (2H, m), 7.31 (1H, d), 7.17-7.06 (1H, m), 4.02 (3H, s), 3.99-3.88 (2H, m).
442









Example 151A
1-(3-{7-[5-(4-Acetyl-piperazin-1-yl)-pyridin-2-yl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




Example 152A
1-{5-[7-(1-Piperidin-4-yl-1H-pyrazol-4-yl)-imidazo[1,2-a]pyridin-3-yl]-pyridin-3-yl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 152B
Example 152B was prepared in accordance with the procedure set out in the Table below.


















Route/
NMR Data 
MS 


Eg.
Compound
Name
Method
(solvent)
Data







152B




1-{5-[7-(1- Piperidin-4-yl- 1H-pyrazol-4- yl)-imidazo[1,2- a]pyridin-3-yl]- pyridin-3-yl}-3- (2,2,2- trifluoroethyl)- urea formate
General route B: B1 using monomer from procedure D4, B2, B3c using monomer from procedure X2, then Z1
(Me-d3-OD): 8.62-8.51 (2H, m), 8.47 (1H, s), 8.43-8.24 (4H, m), 8.08 (1H, s), 7.80 (2H, s), 7.32 (1H, d), 4.71-4.55 (1H, m), 3.97 (2H, q), 3.61 (2H, d), 3.30-3.12 (2H, m), 2.47-2.24 (4H, m).
485









Example 153A
1-{5-[7-(1-Piperidin-3-yl-1H-pyrazol-4-yl)-imidazo[1,2-a]pyridin-3-yl]-pyridin-3-yl}-3-(2,2,2-trifluoro-ethyl)-urea




Example 154A
{3-[7-(4-Fluoro-phenyl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-urea




Example 154B
Example 154B was prepared in accordance with the procedure set out in the Table below


















Route/
NMR Data 
MS 


Eg.
Compound
Name
Method
(solvent)
Data







154B




{3-[7-(4-Fluoro- phenyl)- imidazo[1,2- a]pyridin-3-yl]- phenyl}-urea hydrochloride
General route D: D1, D2 using 4- fluorophenyl- boronic acid and  A5c but heating thermally, procedure D3, D5 (substituting Na2CO3 for K3PO4) using [3- (4,4,5,5- Tetramethyl- [1,3,2]- dioxaborolan-2- yl)-phenyl]-urea, Z5
(DMSO-d6): 8.99 (1H, s), 8.79 (1H, d), 8.36 (1H, s), 8.22 (1H, s), 8.07-7.98 (2H, m), 7.91 (1H, s), 7.83 (1H, dd), 7.56-7.40 (4H, m), 7.31-7.23 (1H, m), 6.03 (1H, s).
347









Example 155A
1-(3-{7-[(E)-2-(3-Methyl-3H-imidazol-4-yl)-vinyl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




The E-isomer of the title compound could be prepared by routes described herein or via selective hydrogenation, using poisoned palladium on the alkyne precursor.
Example 155B
Example 155B was prepared in accordance with the procedure set out in the Table below


















Route/
NMR Data 
MS 


Eg.
Compound
Name
Method
(solvent)
Data







155B




1-(3-{7-[(E)-2- (3-Methyl-3H- imidazol-4-yl)- vinyl]- imidazo[1,2- a]pyridin-3-yl}- phenyl)-3- (2,2,2-trifluoro- ethyl)-urea hydrochloride
General Route H using 5- (chloromethyl)- 1H-imidazole hydrochloride in stepH3
(Me-d3-OD): 9.00 (1H, s), 8.82 (1H, d), 8.21 (1H, s), 8.12 (1H, s), 8.09 (1H, d), 8.06 (1H, t), 7.94 (1H, dd), 7.68-7.60 (2H, m), 7.60-7.54 (1H, m), 7.45 (1H, dd), 7.39 (1H, d), 4.09 (3H, s), 3.96 (2H, q).
441









Example 156A
1-(3-{7-[(Z)-2-(3-Methyl-3H-imidazol-4-yl)-vinyl]-imidazo[1,2-a]pyridin-3-yl}-phenyl)-3-(2,2,2-trifluoro-ethyl)-urea




The Z-isomer of the title compound could be prepared by routes described herein or using Wittig type chemistry from 1-[3-(7-formyl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-3-(2,2,2-trifluoro-ethyl)-urea and the phosphorous ylide derived from 2-(chloromethyl-1-methyl-1H-imidazole.
Example 157A
1-Cyclopropyl-3-{3-[7-(5-methyl-[1,3,4]oxadiazol-2-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-urea




Example 157B
Example 157B was prepared in accordance with the procedure set out below




To a solution of intermediate 39 (490 mg, 1.68 mmol) (from the Preparation of Intermediate section below) in triethylamine (0.47 ml) and DMF (20 ml), 4-nitrophenyl-N-cyclopropylcarbamic acid ester [(187 mg, 0.84 mmol) was added and the mixture was stirred at RT for 12 hours. Over a period of 36 hours, 3 additional amount of 4-nitrophenyl-N-cyclopropylcarbamic acid ester (187 mg, 0.84 mmol) had to be added to complete the conversion. The mixture was poured onto NH4OH 30% and water, stirred for 30 minutes and the precipitate was filtered off. It was washed with ACN and purified by Normal phase on Spherical SiOH 10 μm 60 g PharmPrep MERCK, Mobile phase (97% DCM, 3% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was taken up into Et2O, filtered and dried, yielding 371 mg (59%) of compound 157B. MP=229.6° C. (DSC)
Example 158A
1-Cyclopropyl-3-[3-(7-[1,3,4]thiadiazol-2-yl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-urea




Example 158B
Example 158B was prepared in accordance with the procedure set out below




A mixture of intermediate 44 (0.52 g, 1.77 mmol) (from the Preparation of Intermediate section below) and 4-nitrophenyl chloroformate (0.39 g, 1.95 mmol) in THF (10 ml) was heated at 60° C. for 2 hours. The mixture was cooled to RT, N-ethyl-N-(1-methylethyl)-2-propanamine (0.59 ml, 3.54 mmol) was added dropwise at RT followed by cyclopropanamine (0.135 ml, 1.95 mmol). The mixture was stirred at RT for 2 hours. The mixture was poured onto ice water and EtOAc was added. The organic layer was separated, washed with brine, dried (MgSO4), filtered and the solvent was evaporated. The residue was purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (92% DCM, 8% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was crystallized from DIPE/ACN (90/10), the precipitate was filtered, dried under vacuum, yielding 589 mg (88%) of compound 158B. MP=205° C. (kofler).
Example 159A
1-Cyclopropyl-3-[3-(7-pyrimidin-2-yl-imidazo[1,2-a]pyridin-3-yl)-phenyl]-urea




Example 159B
Preparation of the Intermediate Compounds for Example 159B
Example 1
Preparation of Intermediate A




A mixture of




prepared according to the procedure of Example 1.2 (1.34 g; 5.2 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane (2.7 g; 10.5 mmol), potassium acetate (1.54 g; 15.5 mmol) in dioxane (54 ml) was stirred at RT under a N2 flow. After 10 minutes, palladium(11)acetate 47% Pd (0.35 g; 1.57 mmol) and 2-dicyclohexylphosphino-2′,6′ dimethoxybiphenyl (1.08 g, 2.62 mmol) were added portionwise. Then the mixture was heated at 80° C. overnight. The solution was poured onto cooled water. EtOAc was added. The RM was filtered through a pad of celite. The product was extracted with EtOAc. The organic layer was dried over MgSO4, filtered and evaporated to dryness, yielding 3.1 g (>100%) of intermediate A. The product was used without further purification.

Example 2
a) Preparation of Intermediate B




2-amino-4-chloropyridine (20 g, 156 mmol) and NaHCO3 (26.14 g, 311 mmol) in EtOH (200 ml) were heated to 60° C. Chloroacetaldehyde, 50% weight solution in water (30.1 ml, 233 mmol) was added dropwise and the RM was heated to 80° C. for 1 hour. The RM was cooled to room temperature and evaporated to dryness. The residue was poured onto water and then, extracted with EtOAc. The organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue was poured onto a mixture of water and HCl 3N. The aqueous layer was washed with EtOAc to remove organic impurities. Then, the aqueous leyer was basified with K2CO3 and extracted with EtOAc. The organic layer was dried over MgSO4, filtered and evaporated to dryness to give 23.5 g (99%) of intermediate B .
b) Preparation of Intermediate C




Intermediate B (10 g; 65.5 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane (20 g, 78.65 mmol), K2CO3 (13.6 g, 98.3 mmol), tricyclohexylphosphine (1.84 g, 6.55 mmol), palladium(11)acetate 47% Pd (736 mg, 3.3 mmol) in 2-methoxyethyl ether (100 ml) and water (133 μl) were heated to 100° C. for 15 hours under N2. The RM was cooled to RT and then cooled to 5° C. The RM was filtered and the precipitate was washed with 2-methoxyethyl ether (2*10 ml). The residue was poured onto water (50 ml), then filtered. The precipitate was washed with water (2*20 ml) and dried to give 11.25 g (70%) of intermediate C .
c) Preparation of Intermediate D




The reaction was performed 2 times on 5.6 g of intermediate C .
A solution of intermediate C (5.6 g, 22.9 mmol) and 2-bromopyrimidine (5.47 g, 34.4 mmol) in dioxane (220 ml) was degassed under N2 for 30 minutes at RT. Aqueous 2M Na2CO3 (115 ml, 229.5 mol) and Pddppf (1.68 g, 2.3 mmol) were added and the solution was heated at 100° C. overnight. The RM was poured onto cooled water and filtered over a pad of celite. The filtrate was extracted with DCM. The organic layer was dried over MgSO4 and evaporated to dryness. The residue coming from each reaction were mixed (15.05 g) and purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (0.5% NH4OH, 97% DCM, 3% MeOH) to give 8.6 g (95%) of intermediate D .
d) Preparation of Intermediate E




N-iodosuccinimide (6.88 g, 30.6 mmol) was added in one portion to a solution of intermediate D (5 g, 25.5 mmol) in ACN (250 ml). The mixture was stirred at RT for 2 hours. The precipitate was filtered off, washed with ACN and dried, yielding 7.48 g (91%) of intermediate D.
Preparation of Example 159B




A solution of intermediate D (1.3 g; 4.05 mmol), intermediate A (1.59 g; 5.2 mmol) in dioxane (50 ml) was degassed by bubbling N2 through. K3PO4 (1.72 g; 8.1 mmol), Pddppf (661 mg; 0.81 mmol) and water (1 ml) were added under N2 flow. The solution was heated at 80° C. overnight. The RM was poured onto cooled water. EtOAc was added. The mixture was filtered through a pad of celite. The filtrate was extracted with EtOAc. The organic layer was dried over MgSO4, filtered and evaporated to dryness to afford a crude residue (3.59 g). This reaction was performed 2 other times respectively on 1.3 g and 0.105 g of intermediate D.
After work-up, the residue coming from the different reactions were mixed and purified by Normal phase on Irregular SiOH 20-45 μm 450 g MATREX, Mobile phase (0.5% NH4OH, 94% DCM, 6% MeOH. The desired fraction was collected and the solvent was evaporated. The residue was crystallized from a mixture of acetone/Et2O yielding 531 mg (15%) of compound 159B
MP=229.5 (DSC)
LC/MS data
Rt: 2.75
MH+: 371-Method: 1
The abbreviations used in the above protocol for 159B are as defined after example 248. Also method 1 (see above) refers to the method 1 described after example 337.
Examples 160 to 250
By following the methods described above, or by individual routes described following the below Table, the compounds set out in the Table below were prepared.
MS Data is [Molecular ion]+unless indicated
NMR Data: 1H NMR (400 MHz) unless indicated
















Route/
NMR Data 
MS 


Eg.
Structure and Chemical name
Method
(solvent)
Data







160




General route B: B1, B2, procedure B3c using 2- chloro-4,6-dimethyl- pyrimidine, procedure Z5
(Me-d3-OD): 8.98 (1H, s), 8.92 (1H, d), 8.57 (1H, d), 8.28 (1H, s), 8.05 (1H, s), 7.60 (1H, t), 7.48 (1H, d), 7.42 (1H, d), 7.34 (1H, s), 3.96 (2H, q), 2.63 (6H, s).
441


 


161




General route A: A1, A2, A3, A4, A5a using methyl- [3-methyl-5-(4,4,5,5- tetramethyl-[1,3,2]- dioxaborolan-2-yl)-pyridin- 2-yl]-carbamic acid tert- butyl ester, method Z1
(Me-d3-OD): 8.63 (1H, d), 8.31 (1H, s), 7.87 (1H, s), 7.82 (2H, s), 7.77 (1H, s), 7.50 (1H, t), 7.45- 7.35 (2H, br m), 7.32 (1H, d), 3.96 (2H, q), 3.05 (3H, s), 2.24 (3H, s).
455


 


162




General Route B in step B3d used 2-chloro-5-fluoro- N-methyl-4-pyrimidinamine
(Me-d3-OD): 8.84 (1H, s), 8.78 (1H, s), 8.37 (1H, d), 8.21 (1H, s), 8.16 (1H, d), 7.97 (1H, s), 7.55 (1H, t), 7.48 (1H, d), 7.40-7.25 (1H, m), 3.95 (2H, q), 3.13 (3H, s).
460


 


163




General route D: D1, D2 using 2-chloro-5-fluoro- pyrimidin-4-ylamine and A5c but heating thermally, procedure D3, A3 using ethylamine, D5 (using Na2CO3 for K3PO4) using 1- ethyl-3-[3-(4,4,5,5- tetramethyl-[1,3,2]- dioxaborolan-2-yl)-phenyl]- urea, Z5
(DMSO-d6): 9.14 (1H, s), 8.87 (1H, d), 8.66 (1H, s), 8.49 (1H, s), 8.42 (1H, d), 8.21 (1H, dd), 7.87 (1H, s), 7.72 (2H, s), 7.60-7.54 (1H, m), 7.50 (1H, t), 7.26 (1H, d), 3.12 (2H, q), 1.06 (3H, t).
392


 


164




General route B: B1, B2, procedure B3c using 2-(2- chloro-5-fluoro-pyrimidin-4- ylamino)-ethanol
(Me-d3-OD): 8.54 (1H, d), 8.47 (1H, s), 8.17 (1H, s), 8.06 (1H, d), 7.89 (1H, d), 7.78 (2H, d), 7.50- 7.33 (2H, m), 7.25 (1H, d), 3.96 (2H, q), 3.83 (2H, t), 3.74 (2H, t).
490


 


165A




General Route B followed by procedure B3c using 4- amino-2-chloropyrimidine- 5-carbonitrile
(DMSO-d6): 8.97 (1H, s), 8.78 (1H, s), 8.68 (1H, d), 8.56 (1H, s), 8.08 (2H, s), 7.91 (1H, s), 7.87- 7.80 (1H, m), 7.76 (1H, s), 7.55-7.43 (2H, m), 7.30 (1H, d), 6.87 (1H, t), 4.01- 3.90 (2H, m).
453


 


165B




See Below Example 2.2b)




 


166




General route D: D1, D2 using 2-chloro-5-fluoro- pyrimidin-4-ylamine and A5c but heating thermally, D3, A3 using cyclopropylamine, D5 (using Na2CO3 for K3PO4) using 1-cyclopropyl-3-[3- (4,4,5,5-tetramethyl-[1,3,2]- dioxaborolan-2-yl)-phenyl]- urea, Z5
(DMSO-d6): 8.95 (1H, s), 8.91-8.83 (1H, m), 8.66 (1H, s), 8.49 (1H, s), 8.42 (1H, d), 8.21 (1H, dd), 7.88 (1H, s), 7.72 (2H, br s), 7.58 (1H, d), 7.52 (1H, t), 7.28 (1H, d), 6.74 (1H, s), 2.60-2.53 (1H, m), 0.69-0.60 (2H, m), 0.46-0.37 (2H, m).
404


 


167




General route D: D1, D2 using 2-chloro-5-fluoro- pyrimidin-4-ylamine and method described in A5c but heating thermally, D3, A3 using NH3(g), procedure D5 (using Na2CO3 for K3PO4)
(DMSO-d6): 8.73 (1H, s), 8.62 (1H, d), 8.42 (1H, s), 8.32 (1H, d), 7.82 (1H, s), 7.79 (1H, dd), 7.76- 7.70 (1H, m), 7.53- 7.37 (4H, m), 7.22 (1H, d), 5.93 (2H, s).
364


 


168




General route D: D1, D2 using 2-chloro-5-fluoro- pyrimidin-4-ylamine and method described in A5c but heating thermally, D3, D4, D5 (using Na2CO3 for K3PO4), Z5
(Me-d3-OD): 9.37 (1H, s), 9.04 (1H, d), 8.94 (1H, s), 8.89 (2H, d), 8.61 (1H, s), 8.47-8.35 (2H, m), 4.01 (2H, q).
447


 


169




General Route B in step B3d used 2-chloro-5-fluoro- 4-dimethylaminopyrimidine
(DMSO-d6): 9.34 (1H, s), 8.85 (1H, d), 8.71 (1H, s), 8.47 (1H, s), 8.43 (1H, d), 8.25 (1H, dd), 7.91 (1H, s), 7.60-7.51 (2H, m), 7.38-7.29 (1H, m), 7.06 (1H, t), 4.03-3.90 (2H, m), 3.32 (6H, d).
[Adduct] +  474


 


170




General Route B in step B3c used 5-amino-2,4- dichloropyrimidine
(DMSO-d6): 9.39 (1H, s), 8.87 (1H, d), 8.47 (1H, s), 8.37 (2H, d), 7.92 (1H, s), 7.74 (1H, dd), 7.56 (2H, d), 7.36-7.28 (1H, m), 7.09 (1H, t), 3.43-3.35 (2H, m).
462


 


171




General Route B followed by procedure B3d using 2- chloro-6-methylpyrimidin-4- ylamine
(DMSO-d6): 8.96 (1H, s), 8.62 (1H, d), 8.49 (1H, s), 7.89- 7.80 (2H, m), 7.75 (1H, s), 7.52-7.43 (2H, m), 7.32-7.25 (1H, m), 6.91-6.82 (3H, m), 6.27 (1H, s), 4.01-3.90 (2H, m), 2.33 (3H, s).
442


 


172




General Route B followed by procedure B3d using 6- chloro-3-fluoro-2- methylpyridine
(Me-d3-OD): 8.66 (1H, d), 8.26 (1H, s), 7.92 (1H, dd), 7.84 (1H, s), 7.83-7.71 (2H, m), 7.62 (1H, t), 7.50 (1H, t), 7.42 (1H, d), 7.34 (1H, d), 3.96 (2H, q), 2.61 (3H, d).
444


 


173




General Route B in step B3c used 2-chloro-5- methoxy-pyrimidin-4- ylamine
(Me-d3-OD): 9.03 (1H, d), 8.80 (1H, s), 8.40 (1H, s), 8.20 (1H, dd), 8.09 (1H, s), 8.03 (1H, s), 7.60 (1H, t), 7.51-7.45 (1H, m), 7.42 (1H, d), 4.12 (3H, s), 3.96 (2H, q).
458


 


174




General Route B followed by procedure B3d using 5- amino-2-chloropyrimidine
(DMSO-d6): 9.00 (1H, s), 8.60 (1H, d), 8.33 (1H, s), 8.27 (2H, s), 7.84-7.70 (3H, m), 7.54-7.41 (2H, m), 7.27 (1H, d), 6.90 (1H, s), 5.87 (2H, s), 4.01-3.89 (2H, m).
428


 


175




General Route B followed by B3d using 4-amino-2- chloro-5-methylpyrimidine
(DMSO-d6): 8.96 (1H, s), 8.62 (1H, d), 8.47 (1H, s), 8.11 (1H, s), 7.88-7.79 (2H, m), 7.75 (1H, s), 7.52-7.43 (2H, m), 7.29 (1H, d), 6.86 (3H, t), 4.00- 3.91 (2H, m), 2.06 (3H, s).
442


 


176




General Route B followed by procedure B3d using 4- amino-2-chloro-5- methylpyrimidine (minor product)
(DMSO-d6): 8.98 (1H, s), 8.64 (1H, d), 8.23 (1H, s), 7.87 (2H, d), 7.82-7.75 (1H, m), 7.51-7.43 (2H, m), 7.32-7.24 (2H, m), 6.87 (1H, t), 6.53 (2H, s), 4.00- 3.90 (2H, m), 2.26 (3H, s).
442


 


177




General Route B followed by procedure B3d using X16
(DMSO-d6): 8.97 (1H, s), 8.63 (1H, d), 8.46 (1H, s), 8.27 (1H, d), 7.89-7.80 (3H, m), 7.77 (1H, s), 7.52-7.43 (2H, m), 7.32-7.25 (1H, m), 6.86 (1H, t), 4.00-3.90 (2H, m), 3.63-3.54 (2H, m), 3.18 (1H, d), 1.27 (3H, t).
474


 


178




General Route B in step B3d used 2-chloro-5- trifluoromethyl-pyrimidin-4- ylamine
(Me-d3-OD): 8.93 (2H, d), 8.68 (1H, s), 8.48 (1H, dd), 8.30 (1H, s), 8.05 (1H, t), 7.60 (1H, t), 7.48 (1H, dd), 7.42 (1H, d), 3.96 (2H, q).
496


 


179




General Route B in step B3d used 4-chloro-5- trifluoromethyl-pyrimidin-2- ylamine
(Me-d3-OD): 8.94 (1H, d), 8.73 (1H, s), 8.30 (1H, s), 8.19 (1H, s), 8.05 (1H, t), 7.71 (1H, dd), 7.60 (1H, t), 7.53-7.46 (1H, m), 7.42 (1H, d), 3.96 (2H, q).
496


 


180




General Route B followed by procedure B3d using X15
(DMSO-d6): 8.99 (1H, s), 8.64 (1H, d), 8.52 (1H, s), 8.29 (1H, d), 7.98 (1H, d), 7.92-7.82 (2H, m), 7.81-7.74 (1H, m), 7.52-7.42 (2H, m), 7.33-7.25 (1H, m), 6.89 (1H, t), 4.01- 3.89 (2H, m), 3.10- 3.02 (1H, m), 0.89- 0.80 (2H, m), 0.71- 0.63 (2H, m).
486


 


181




General route B: B1, B2, B3d using 2-chloro-5- methoxy-pyrimidine (MW irradiation 120° C., 1 hr)
(DMSO-d6): 9.00 (1H, s), 8.73-8.66 (2H, m), 8.66-8.60 (1H, m), 7.94 (1H, dd), 7.90 (1H, s), 7.80 (1H, s), 7.53- 7.42 (2H, m), 7.35- 7.26 (1H, m), 6.94 (1H, d), 6.89 (1H, t), 4.11 (3H, s), 4.04- 3.89 (2H, m).
443


 


182




General Route B, procedure B3d using X17 followed by procedure Z1a
(Me-d3-OD): 8.70- 8.61 (1H, m), 8.59 (1H, s), 8.39 (2H, s), 8.25 (1H, d), 8.02- 7.90 (2H, m), 7.86- 7.80 (1H, m), 7.55- 7.46 (1H, m), 7.41- 7.30 (2H, m), 4.02- 3.91 (4H, m).
489


 


183




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-iodo-6- methoxy-pyrimidine
(DMSO-d6): 9.01 (1H, s), 8.91 (1H, d), 8.67 (1H, d), 8.59 (1H, s), 7.90 (1H, s), 7.85-7.77 (2H, m), 7.73 (1H, s), 7.53- 7.43 (2H, m), 7.34- 7.25 (1H, m), 6.90 (1H, t), 4.01 (3H, s), 3.99-3.88 (2H, m).
443


 


184




General route B: B1, procedure B2, B3d (MW irradiation 120° C., 1 hr) using 4-iodo-6-methoxy- pyrimidine, procedure Z5
(Me-d3-OD): 8.66 (1H, d), 8.46 (1H, s), 8.31 (1H, s), 8.20 (1H, s), 7.88-7.80 (2H, m), 7.61 (1H, dd), 7.51 (1H, t), 7.47-7.39 (1H, m), 7.34 (1H, d), 7.05 (1H, s), 3.96 (2H, q).
429


 


185




General Route B in step B3d used 2-chloro- pyrimidine-4-carboxylic acid amide
(Me-d3-OD): 9.27 (1H, d), 9.15 (1H, s), 8.97 (1H, d), 8.72 (1H, dd), 8.33 (1H, s), 8.17 (1H, d), 8.08 (1H, s), 7.61 (1H, t), 7.54-7.47 (1H, m), 7.44 (1H, d), 3.96 (2H, q).
456


 


186




General RouteH using commercially available triphenyl(2-pyridylmethyl) phosphonium chloride hydrochloride in stepH4
(Me-d3-OD): 8.88 (1H, d), 8.84 (1H, d), 8.57 (1H, t), 8.42 (1H, d), 8.26 (2H, d), 8.13 (1H, d), 8.07 (1H, s), 8.01-7.88 (2H, m), 7.78 (1H, d), 7.59 (1H, t), 7.51- 7.43 (1H, m), 7.41 (1H, d), 3.96 (2H, q).
438


 


187




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 5-chloro- 2-fluoro-3-methyl-pyridine
(DMSO-d6): 8.96 (1H, s), 8.65 (1H, d), 8.57 (1H, s), 8.39 (1H, dd), 8.15-8.08 (1H, m), 7.83 (1H, s), 7.81 (1H, s), 7.51-7.39 (3H, m), 7.32-7.24 (1H, m), 6.85 (1H, t), 4.03- 3.88 (2H, m), 2.35 (3H, s).
444


 


188




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 5-chloro- 2-fluoro-3-methyl-pyridine, procedure Z5 (using MeOH to solubilise)
(DMSO-d6): 8.96 (1H, s), 8.62 (1H, d), 8.53 (1H, d), 8.11 (1H, d), 8.02 (1H, s), 7.80 (2H, s), 7.49- 7.43 (2H, m), 7.43- 7.37 (1H, m), 7.31- 7.24 (1H, m), 6.85 (1H, t), 4.02-3.90 (5H, m), 2.25 (3H, s).
456


 


189




General Route H
(Me-d3-OD): 8.74 (1H, d), 8.01 (3H, d), 7.77-7.66 (2H, m), 7.64-7.50 (4H, m), 7.45-7.32 (2H, m), 4.04 (3H, s), 4.01- 3.89 (2H, m).
441


 


190




General Route B followed by procedure B3d using 2- chloro-4-methoxypyrimidine then procedure Z7
(Me-d3-OD): 8.92 (1H, d), 8.82 (1H, s), 8.49 (1H, d), 8.39- 8.25 (2H, m), 8.04 (1H, s), 7.59 (1H, t), 7.52-7.37 (2H, m), 6.73 (1H, d), 3.96 (2H, q).
429


 


191




General Route B in step B3d used (4-chloro-5- trifluoromethyl-pyrimid-in-2- yl)-cyclobutyl-amine (as mixture with regioisomer)
(Me-d3-OD): 8.94 (1H, d), 8.71 (1H, s), 8.30 (1H, s), 8.18 (1H, s), 8.04 (1H, s), 7.71 (1H, d), 7.59 (1H, t), 7.49 (1H, d), 7.42 (1H, d), 4.54 (1H, d), 4.03-3.89 (3H, m), 2.38 (2H, s), 2.16-2.01 (2H, m), 1.87-1.69 (2H, m).
550


 


192




General Route B in step B3d used (2-chloro-5- trifluoromethyl-pyrimid-in-4- yl)-cyclobutyl-amine (as mixture with regioisomer)
(Me-d3-OD): 8.95 (2H, d), 8.65 (1H, s), 8.48 (1H, d), 8.31 (1H, s), 8.07 (1H, s), 7.60 (1H, t), 7.48 (1H, d), 7.43 (1H, d), 4.99-4.88 (2H, m), 4.03-3.90 (2H, m), 2.59-2.46 (2H, m), 2.35-2.19 (2H, m), 1.97-1.84 (2H, m).
550


 


193




General Route B in step B3d used [1-(2-chloro- pyrimidin-4-yl)-azetidin-3- yl]-carbamic acid tert-butyl ester
(DMSO-d6): 8.96 (1H, s), 8.64 (1H, d), 8.53 (1H, s), 8.34 (1H, d), 7.92-7.83 (2H, m), 7.77 (1H, s), 7.65 (1H, d), 7.52-7.43 (2H, m), 7.29 (1H, dd), 6.85 (1H, t), 6.41 (1H, d), 4.50 (1H, s), 4.38 (2H, d), 4.03-3.89 (4H, m), 1.41 (9H, s).
583


 


194




General Route B followed by procedure B3d using X18 then Z9
(Me-d3-OD): 8.66 (1H, d), 8.31 (1H, s), 7.88-7.78 (2H, m), 7.65 (1H, dd), 7.50 (1H, t), 7.47-7.40 (1H, m), 7.34 (1H, d), 7.12 (1H, s), 3.95 (2H, q), 3.85 (4H, d), 3.76 (2H, t), 2.67 (4H, t), 2.62 (2H, t), 2.56 (3H, s).
555


 


195




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using (6-chloro- pyrimidin-4-yl)-methyl- amine, method Z5
(Me-d3-OD): 9.03 (1H, d), 8.82 (1H, s), 8.60 (1H, s), 8.39 (1H, s), 8.11 (1H, s), 7.95-7.86 (1H, m), 7.60 (1H, t), 7.50- 7.37 (2H, m), 7.30 (1H, s), 3.96 (2H, q), 3.20 (3H, s).
442


 


196




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using (6-chloro- pyrimidin-4-yl)-dimethyl- amine, method Z5
(Me-d3-OD): 9.04 (1H, d), 8.81 (1H, s), 8.64 (1H, s), 8.40 (1H, s), 8.11 (1H, s), 7.98 (1H, dd), 7.61 (1H, t), 7.54 (1H, s), 7.50-7.38 (2H, m), 3.96 (2H, q), 3.48 (6H, s).
456


 


197




Prepared from {1-[2-(3-{3- [3-(2,2,2-trifluoroethyl)- ureido]-phenyl}- imidazo[1,2-a]-pyridin-7-yl)- pyrimi-din-4-yl]-azetidin-3- yl}-carbamic acid tert-butyl ester by depro-tection X3
(Me-d3-OD): 9.01 (1H, d), 8.90 (1H, s), 8.44 (1H, d), 8.38 (1H, s), 8.32 (1H, dd), 8.10 (1H, t), 7.60 (1H, t), 7.47 (1H, dd), 7.43 (1H, d), 6.81 (1H, d), 4.82-4.74 (2H, m), 4.53-4.38 (3H, m), 3.96 (2H, q).
483


 


198




General Route B followed by procedure B3d using (6- chloro-2-methyl-pyrimidin- 4-yl)-dimethyl-amine
(DMSO-d6): 9.08 (1H, s), 8.63 (1H, d), 8.54 (1H, s), 7.89- 7.75 (3H, m), 7.46 (2H, d), 7.33-7.24 (1H, m), 7.19 (1H, s), 6.99 (1H, d), 4.03-3.89 (2H, m), 3.21-3.11 (6H, m), 2.48 (3H, s).
470


 


199




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-chloro- 2-trifluoromethyl-pyrimidine, method Z5
(Me-d3-OD): 9.24 (1H, d), 9.01 (1H, d), 8.90 (1H, s), 8.51 (1H, d), 8.35 (1H, s), 8.33 (1H, dd), 8.12- 8.04 (1H, m), 7.60 (1H, t), 7.52-7.38 (2H, m), 3.96 (2H, q).
481


 


200




General Route B followed by procedure B3d using (2- Chloro-5-methyl-pyrimidin- 4-yl)-dimethyl-amine
(Me-d3-OD): 8.93- 8.85 (1H, m), 8.78 (1H, s), 8.30 (1H, dd), 8.21 (2H, d), 8.05 (1H, s), 7.58 (1H, t), 7.48-7.37 (2H, m), 3.96 (2H, q), 3.40 (6H, s), 2.50 (3H, s).
[Fragment] + 470


 


201




General Route B in step B3d used 4-azetidin-1-yl-2- chloro-pyrimidine
(Me-d3-OD): 9.04 (1H, d), 8.83 (1H, s), 8.42 (1H, s), 8.27 (1H, d), 8.19 (1H, dd), 8.11 (1H, t), 7.61 (1H, t), 7.49- 7.38 (2H, m), 6.74 (1H, d), 4.51 (4H, s), 3.96 (2H, q), 2.69- 2.58 (2H, m).
468


 


202




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 6-chloro- pyridin-3-ol, procedure Z5
(Me-d3-OD): 8.91 (1H, d), 8.53 (1H, s), 8.41 (1H, d), 8.24 (1H, s), 8.21 (1H, d), 8.12 (1H, d), 8.05 (1H, s), 7.68-7.54 (2H, m), 7.52-7.44 (1H, m), 7.41 (1H, d), 3.96 (2H, q).
428


 


203




General Route B in step B3d used 1-(2-chloro- pyrimidin-4-yl)-azetidin-3-ol
(Me-d3-OD): 9.06 (1H, d), 8.85 (1H, s), 8.44 (1H, s), 8.30 (1H, d), 8.20 (1H, d), 8.11 (1H, s), 7.61 (1H, t), 7.51-7.38 (2H, m), 6.82 (1H, d), 4.72 (2H, s), 4.26 (2H, d), 3.96 (2H, q).
484


 


204




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 2-chloro-5- methoxy-pyridine, method Z5
(Me-d3-OD): 8.90 (1H, d), 8.58 (1H, s), 8.55 (1H, d), 8.26 (1H, d), 8.23 (1H, s), 8.17 (1H, dd), 8.08- 8.00 (1H, m), 7.74 (1H, dd), 7.59 (1H, t), 7.53-7.45 (1H, m), 7.41 (1H, d), 4.03 (3H, s), 3.96 (2H, q).
442


 


205




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 3-chloro-5- methylsulfanylphenyl- amine, method Z5
(Me-d3-OD): 8.99 (1H, d), 8.62 (1H, s), 8.37 (1H, s), 8.09 (1H, s), 7.96 (1H, dd), 7.60 (1H, t), 7.51-7.37 (2H, m), 7.02 (1H, s), 3.96 (2H, q), 2.75 (3H, s).
474


 


206




General Route H using (E)- 3-imidazo-[1,2-a]pyridin-7- yl-prop-2-en-1-ol
(Me-d3-OD): 8.71 (1H, d), 8.15-8.07 (1H, m), 7.99 (1H, s), 7.88-7.80 (1H, m), 7.69 (1H, d), 7.56 (1H, t), 7.46 (1H, d), 7.36 (1H, d), 6.97-6.85 (2H, m), 4.38 (2H, d), 3.95 (2H, q).
391


 


207




General Route B in step B3d used 6- chloronicotinamide
(DMSO-d6): 9.16 (1H, s), 8.97 (1H, s), 8.69 (1H, d), 8.51 (1H, s), 8.38-8.30 (2H, m), 8.22 (1H, s), 7.90 (1H, s), 7.86 (1H, dd), 7.80 (1H, s), 7.64 (1H, s), 7.52-7.44 (2H, m), 7.34-7.26 (1H, m), 6.86 (1H, t), 4.01- 3.90 (2H, m).
455


 


208




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 3-chloro-5- methylphenylamine, method Z5
(Me-d3-OD): 9.02 (1H, d), 8.64 (1H, s), 8.39 (1H, s), 8.09 (1H, s), 7.93 (1H, d), 7.60 (1H, t), 7.52- 7.37 (2H, m), 7.21 (1H, s), 3.96 (2H, q), 2.73 (3H, s).
442


 


209




General Route B in B3d used 2- chloroisonicotinamide
(DMSO-d6): 8.98 (1H, s), 8.85 (1H, d), 8.69 (1H, d), 8.57 (1H, s), 8.50 (1H, s), 8.39 (1H, s), 7.87 (1H, s), 7.86-7.80 (2H, m), 7.80-7.75 (2H, m), 7.52-7.44 (2H, m), 7.34-7.26 (1H, m), 6.86 (1H, t), 4.02-3.90 (2H, m).
455


 


210




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 6-chloro-2- trifluoromethyl-pyrimid-in-4- ylamine
(Me-d3-OD): 8.68 (1H, d), 8.40 (1H, s), 7.89-7.84 (1H, m), 7.83 (1H, s), 7.69 (1H, dd), 7.50 (1H, t), 7.42 (1H, d), 7.34 (1H, d), 7.19 (1H, s), 3.96 (2H, q).
496


 


211




General Route B followed by procedure B3d using X19 sulphonamide deprotection Z8
(DMSO-d6): 9.46- 9.39 (1H, m), 9.12 (1H, s), 8.96 (1H, d), 8.70 (1H, d), 8.32 (1H, s), 8.13 (1H, dd), 7.96-7.82 (3H, m), 7.57-7.42 (3H, m), 7.40-7.23 (3H, m), 4.01-3.88 (2H, m).
479


 


212




General Route B followed by procedure B3c using X20
(DMSO-d6): 8.95 (1H, s), 8.62 (1H, s), 8.55 (1H, d), 8.25 (1H, s), 7.96-7.89 (1H, m), 7.77 (1H, s), 7.71 (1H, s), 7.47-7.39 (2H, m), 7.33-7.21 (2H, m), 6.85 (1H, t), 5.32- 5.23 (1H, m), 4.62 (1H, t), 4.45 (1H, dd), 4.34 (1H, t), 4.17 (1H, dd), 4.01- 3.90 (2H, m), 1.84 (3H, s)
498


 


213




General Route B followed by procedure B3d using 2- chloro-4-(1h-imidazol-1- yl)pyrimidine
(DMSO-d6): 9.07 (1H, d), 8.97 (2H, d), 8.82 (1H, s), 8.70 (1H, d), 8.30 (1H, s), 8.05 (1H, dd), 7.97- 7.87 (2H, m), 7.82 (1H, s), 7.53-7.45 (2H, m), 7.36-7.28 (1H, m), 7.25 (1H, s), 6.87 (1H, t), 4.02- 3.90 (2H, m).
479


 


214




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using (3-chloro- 5-trifluoro methyl-phenyl)- dimethyl-amine, method Z5
(Me-d3-OD): 8.93 (1H, d), 8.81 (1H, s), 8.32-8.23 (2H, m), 8.06 (1H, s), 7.59 (1H, t), 7.51 (1H, s), 7.47 (1H, d), 7.42 (1H, d), 3.96 (2H, q).
524


 


215




General Route B followed by procedure B3d using 2- (imidazol-1-yl)-4- chloropyrimidine
(Me-d3-OD): 9.91 (1H, s), 9.17 (1H, d), 9.03-8.91 (2H, m), 8.60 (1H, t), 8.44- 8.28 (3H, m), 8.12 (1H, t), 7.76 (1H, t), 7.60 (1H, t), 7.43 (2H, dd), 3.96 (2H, q).
479


 


216




General Route B followed by procedure B3d using X19
(DMSO-d6): 9.10 (1H, d), 8.97 (1H, s), 8.80-8.67 (2H, m), 8.02 (1H, dd), 7.96- 7.85 (3H, m), 7.77 (1H, s), 7.58-7.42 (2H, m), 7.40-7.27 (2H, m), 6.86 (1H, t), 4.03-3.89 (2H, m), 3.00 (6H, s)
586


 


217




General Route B followed by procedure B3c using X21 loss of THP occurred
(Me-d3-OD): 8.57 (1H, d), 8.48 (1H, s), 8.34 (1H, s), 8.14 (1H, s), 7.87-7.80 (1H, m), 7.78 (1H, s), 7.71-7.64 (1H, m), 7.48 (1H, t), 7.38 (1H, d), 7.29 (2H, t), 5.31-5.21 (1H, m), 4.25 (2H, t), 4.14- 4.03 (2H, m), 3.95 (2H, q), 3.77-3.63 (2H, m), 3.09 (2H, t).
500


 


218




General route B: B1, B2, B3c using (3-chloro-5- methyl-sulfanyl-phenyl)- methyl-amine, procedure Z5
(Me-d3-OD): 8.98 (1H, d), 8.57 (1H, br s), 8.36 (1H, s), 8.09 (1H, s), 7.91 (1H, br s), 7.60 (1H, t), 7.50- 7.37 (2H, m), 6.94 (1H, br s), 3.96 (2H, q), 3.17 (3H, s), 2.75 (3H, s).
488


 


219




General Route B in step B3a used 5-bromo-2- methylbenzothiazole
(DMSO-d6): 9.00 (1H, s), 8.65 (1H, d), 8.38 (1H, d), 8.17 (1H, d), 8.11 (1H, s), 7.91 (1H, dd), 7.81 (2H, d), 7.50 (1H, dd), 7.48-7.43 (2H, m), 7.33-7.25 (1H, m), 6.89 (1H, t), 4.02-3.90 (2H, m), 2.85 (3H, s).
482


 


220




General Route B in step B3d used 2-chloro- pyrimidine-4-carboxylic acid methylamide
(DMSO-d6): 9.46- 9.39 (1H, m), 9.17 (1H, d), 9.14 (1H, s), 8.98 (1H, s), 8.70 (1H, d), 8.12 (1H, dd), 7.95 (2H, d), 7.84 (1H, s), 7.52- 7.44 (2H, m), 7.36- 7.28 (1H, m), 6.87 (1H, t), 4.01-3.91 (2H, m), 2.93 (3H, d).
470


 


221




General Route B in step B3d used (2-chloro- pyrimidin-4-yl)-morpholin-4- yl-methanone
(Me-d3-OD): 9.19 (1H, d), 9.03-8.93 (2H, m), 8.53 (1H, dd), 8.32 (1H, s), 8.07 (1H, s), 7.77 (1H, d), 7.60 (1H, t), 7.53-7.46 (1H, m), 7.43 (1H, d), 3.96 (2H, q), 3.86 (4H, s), 3.76 (2H, t), 3.66 (2H, t).
526


 


222




General Route B in step B3d used (2-chloro- pyrimidin-4-yl)-morpholin-4- yl-methanone
(Me-d3-OD): 9.16 (1H, s), 8.95 (1H, d), 8.75 (1H, dd), 8.33 (1H, s), 8.09 (1H, s), 8.04 (1H, s), 7.61 (1H, t), 7.48 (1H, d), 7.44 (1H, d), 3.96 (2H, q), 3.07 (3H, s), 2.79 (3H, s).
484


 


223




General Route B in step B3d used (6-chloro-pyridin- 3-yl)-morpholin-4-yl- methanone
(Me-d3-OD): 8.94 (1H, d), 8.89 (1H, s), 8.74 (1H, s), 8.35 (1H, d), 8.28 (2H, d), 8.14 (1H, d), 8.04 (1H, s), 7.59 (1H, t), 7.50 (1H, d), 7.42 (1H, d), 3.96 (2H, q), 3.78 (6H, d), 3.67- 3.54 (2H, m), 1.19 (1H, t).
525


 


224




General Route B in step B3d used 6-chloro-N- methyl-nicotinamide
(Me-d3-OD): 9.21 (1H, d), 8.94 (1H, d), 8.75 (1H, s), 8.42 (1H, dd), 8.36-8.24 (3H, m), 8.06 (1H, s), 7.60 (1H, t), 7.48 (1H, d), 7.42 (1H, d), 3.96 (2H, q), 3.00 (3H, s).
469


 


225




General Route B in step B3d used 2-bromo-6- methylimidazo[2,1- B][1,3,4]thiadiazole
(Me-d3-OD): 8.75- 8.67 (1H, m), 8.16 (1H, s), 7.87 (2H, d), 7.80 (1H, s), 7.59 (1H, d), 7.56-7.46 (1H, m), 7.43 (1H, d), 7.35 (1H, d), 3.96 (2H, q), 2.38 (3H, s).
472


 


226




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 1-chloro-3- isopropyl-5-methyl- benzene, procedure Z5
(DMSO-d6): 9.35 (1H, s), 8.92 (1H, d), 8.79 (1H, s), 8.48 (1H, s), 8.20 (1H, d), 8.14 (1H, s), 7.94 (1H, s), 7.56 (2H, d), 7.35 (1H, s), 7.07 (1H, t), 4.01-3.91 (2H, m), 3.28-3.18 (1H, m), 2.60 (3H, s), 1.37 (6H, d).
469


 


227




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-chloro-6- trifluoro methyl-pyrimidine, procedure Z5
(Me-d3-OD): 9.59 (1H, s), 9.00 (1H, d), 8.96 (1H, s), 8.73 (1H, s), 8.44-8.33 (2H, m), 8.09 (1H, s), 7.61 (1H, t), 7.52- 7.39 (2H, m), 3.96 (2H, q).
481


 


228




General Route B. In A3 ethylamine was used and step B3d used 2-chloro-5- fluoro-6-picoline
(DMSO-d6): 8.63 (2H, d), 8.36 (1H, s), 8.11 (1H, dd), 7.81 (2H, d), 7.78-7.71 (2H, m), 7.42 (2H, d), 7.26-7.18 (1H, m), 6.20 (1H, t), 3.20-3.08 (2H, m), 2.57 (3H, d), 1.15- 1.02 (3H, m).
390


 


229




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 3-chloro- 6-trifluoro methyl-pyridazine, method Z5
(Me-d3-OD): 9.03 (1H, d), 8.88 (1H, s), 8.73 (1H, d), 8.42- 8.31 (3H, m), 8.09 (1H, s), 7.61 (1H, t), 7.53-7.39 (2H, m), 3.96 (2H, q).
481


 


230




General Route B. In A3 using ethylamine and step B3d used 2-chloro-5- methoxypyrimidine
(DMSO-d6): 8.72 (2H, s), 8.66 (1H, d), 8.62 (1H, s), 8.48 (1H, s), 7.87 (1H, dd), 7.83 (1H, s), 7.77 (1H, s), 7.49- 7.39 (2H, m), 7.27- 7.19 (1H, m), 6.20 (1H, t), 4.00 (3H, s), 3.18-3.08 (2H, m), 1.07 (3H, t).
389


 


231




General Route B in step B3d used 6-chloro-3- trifluoromethyl-pyridin-2- ylamine
(DMSO-d6): 9.66 (1H, s), 8.88 (1H, d), 8.60 (1H, s), 8.51 (1H, s), 8.13 (1H, dd), 8.01 (1H, d), 7.92 (1H, s), 7.64- 7.49 (3H, m), 7.33 (1H, d), 7.25 (1H, t), 4.03-3.88 (2H, m)
495


 


232




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 5-bromo- 2-trifluoro-methyl-pyrimidine, method Z5
(DMSO-d6): 9.64 (2H, s), 9.29 (1H, s), 8.92 (1H, d), 8.54 (1H, s), 8.37 (1H, s), 7.93 (2H, s), 7.53 (2H, s), 7.34 (1H, s), 7.04 (1H, t), 3.99- 3.92 (2H, m).
481


 


233




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-chloro- 2-isopropyl-pyrimidine, procedure Z5
(DMSO-d6): 9.53 (1H, s), 9.02 (1H, d), 8.92 (1H, d), 8.82 (1H, s), 8.52 (1H, s), 8.29-8.19 (2H, m), 7.94 (1H, s), 7.62- 7.51 (2H, m), 7.34 (1H, d), 7.17 (1H, t), 4.03-3.88 (2H, m), 3.35-3.24 (1H, m), 1.39 (6H, d).
455


 


234




General Route B in step B3d used 6-chloro-5- trifluoromethyl-pyridin-2- ylamine
(Me-d3-OD): 9.07 (1H, d), 8.72 (1H, s), 8.57 (1H, s), 8.42 (1H, s), 8.10 (1H, s), 7.88 (1H, dd), 7.61 (1H, t), 7.55 (1H, s), 7.48 (1H, d), 7.43 (1H, d), 3.96 (2H, q).
495


 


235




General Route B. In A3 used ethylamine and step B3d used 2-chloro-4- amino-5- triflouromethylpyrimidine which was prepared using the method described for Example 178
(Me-d3-OD): 8.93 (1H, d), 8.72 (1H, s), 8.27 (1H, s), 8.17 (1H, s), 8.03 (1H, t), 7.68 (1H, dd), 7.56 (1H, t), 7.42 (1H, d), 7.37 (1H, d), 3.31- 3.24 (2H, m), 1.24- 1.14 (3H, m).
442


 


236




General Route B. In A3 ethylamine and step B3d used 2-chloro-5- trifluoromethyl-(1,3,4)- thiadiazole
(Me-d3-OD): 8.76 (1H, d), 8.39 (1H, s), 7.91 (1H, s), 7.88 (1H, s), 7.73 (1H, dd), 7.50 (1H, t), 7.39 (1H, d), 7.32 (1H, d), 3.31-3.22 (2H, m), 1.19 (3H, t).
433


 


237




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-chloro- 6-methyl-2-trifluoromethyl- pyrimidine, method Z5
(DMSO-d6): 9.43 (1H, s), 8.93 (1H, d), 8.81 (1H, s), 8.66 (1H, s), 8.44 (1H, s), 8.14 (1H, dd), 7.92 (1H, s), 7.60-7.49 (2H, m), 7.38-7.29 (1H, m), 7.11 (1H, t), 4.03-3.88 (2H, m), 2.73 (3H, s).
495


 


238




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-chloro- 2-methyl-6-trifluoromethyl- pyrimidine, method Z5
(DMSO-d6): 9.44 (1H, s), 8.95 (1H, s), 8.90 (1H, d), 8.75 (1H, s), 8.45 (1H, s), 8.26 (1H, d), 7.93 (1H, s), 7.61-7.49 (2H, br m), 7.34 (1H, s), 7.12 (1H, t), 4.00- 3.91 (2H, m), 2.87 (3H, s).
495


 


239




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 4-chloro- 2-trifluoromethyl-pyrimi-dine, method Z5
(DMSO-d6): 9.29 (1H, d), 9.00 (1H, s), 8.92 (1H, d), 8.84 (1H, s), 8.73 (1H, d), 8.42 (1H, s), 8.16 (1H, d), 7.94 (1H, s), 7.50 (2H, s), 7.28 (1H, s), 6.41 (1H,  br s), 3.20-3.07 (2H, m), 1.07 (3H, t).
427


 


240




General route B: B1, B2, B3d (MW irradiation  120° C., 1 hr) using 2-chloro- 5-ethoxy-pyrimidine
(DMSO-d6): 8.99 (1H, s), 8.70 (2H, s), 8.67 (1H, d), 8.48 (1H, s), 7.87 (1H, dd), 7.85 (1H, s), 7.76 (1H, s), 7.55- 7.43 (2H, m), 7.29 (1H, dt), 6.88 (1H, t), 4.29 (2H, q), 4.01- 3.89 (2H, m), 1.41 (3H, t).
457


 


241




General Route B in step B3d used 2-bromo-5-(2- pyrroli-din-1-yl-ethyl)- [1,3,4]thiadiazole, which was prepared using method X1 from 5-(2-pyrrolidin-1-yl- ethyl)-[1,3,4] thiadiazol-2- ylamine
(DMSO-d6): 9.01- 8.94 (1H, m), 8.71- 8.63 (1H, m), 8.22 (1H, s), 7.94-7.87 (1H, m), 7.77 (1H, s), 7.64-7.54 (1H, m), 7.54-7.42 (2H, m), 7.34-7.25 (1H, m), 6.90-6.81 (1H, m), 4.01-3.89 (2H, m), 2.88-2.73 (2H, m), 2.59 (4H, s), 1.77 (4H, s).
516


 


242




General Route B in step B3d used 4-chloro-5- isopropyl-pyrimidin-2- ylamine
(Me-d3-OD): 9.00 (1H, d), 8.55 (1H, s), 8.36 (1H, s), 8.30 (1H, s), 8.09 (1H, s), 7.72 (1H, dd), 7.70- 7.62 (1H, m), 7.52- 7.45 (1H, m), 7.43 (1H, d), 3.96 (2H, q), 3.22-3.09 (1H, m), 1.30 (6H, d).
470


 


243




General Route B in step B3d used 2-chloro-4- isopropyl-pyrimidine
(Me-d3-OD): 9.02 (1H, s), 8.94 (1H, d), 8.89 (1H, d), 8.59 (1H, dd), 8.29 (1H, s), 8.05 (1H, s), 7.60 (1H, t), 7.54-7.46 (2H, m), 7.43 (1H, d), 3.96 (2H, q), 3.28-3.14 (1H, m), 1.43 (6H, d).
455


 


244




General Route B in step B3d used 2-chloro-5- trifluoromethyl-pyrimidine
(Me-d3-OD): 9.38 (2H, s), 9.09 (1H, s), 8.99 (1H, d), 8.59 (1H, dd), 8.34 (1H, s), 8.07 (1H, t), 7.60 (1H, t), 7.48 (1H, dd), 7.43 (1H, d), 3.96 (2H, q).
481


 


245




General Route B in step B3d used 2-amino-4- chloro-6- trifluoromethylpyrimidine
(DMSO-d6): 8.99 (1H, s), 8.69 (1H, d), 8.65 (1H, s), 7.93 (1H, s), 7.84-7.75 (3H, m), 7.53-7.45 (2H, m), 7.45-7.39 (2H, m), 7.35-7.26 (1H, m), 6.87 (1H, t), 4.01-3.89 (2H, m).
496


 


246




General Route B in step B3d used [2-(5-Bromo- [1,3,4]thiadiazol-2-yl)-ethyl]- diethyl-amine, which was prepared using method X1 from 5-(2-diethyl-amino- ethyl)-[1,3,4]thiadiazol-2- ylamine
(Me-d3-OD): 8.71 (1H, d), 8.19 (1H, s), 7.86 (2H, d), 7.66 (1H, dd), 7.51 (1H, t), 7.44 (1H, d), 7.35 (1H, d), 3.96 (2H, q), 4.41-3.36 (2H, m), 2.98 (2H, t), 2.79- 2.68 (4H, m), 1.14 (6H, t).
518


 


247




3-lodo-7-(6-methyl- imidazo[2,1-b]-[1,3,4]- thiadiazol-2-yl)-imidazo [1,2-a] pyridine prepared from 2-bromo-6-methyl- imidazo[2,1-b]- [1,3,4]thiadiazole using A1, A2 and A3. Then B3d
(DMSO-d6) 8.98 (1H, br s), 8.74 (1H, d), 8.22 (1H, s), 8.14 (1H, s), 7.78 (1H, s), 7.49 (1H, d), 7.43 (1H, m), 7.16 (1H, m), 6.94 (1H, m), 6.86 (1H, t), 4.64 (1H, m), 3.95 (2H, m), 2.48 (3H, s), 1.35 (6H, d)
530


 


248




General Route B in step B3d used 2,5-dichloro- pyrimidin-4-ylamine
(Me-d3-OD): 8.95 (1H, d), 8.85 (1H, s), 8.54 (1H, s), 8.38-8.29 (2H, m), 8.05 (1H, s), 7.60 (1H, t), 7.49 (1H, d), 7.42 (1H, d), 3.96 (2H, q).
462









The following examples further illustrate the present invention:
Hereinafter, “MeOH” is defined as methanol, “EtOH” is defined as ethanol, “EtOAc” is defined as ethyl acetate, “DCM” is defined as dichloromethane, “DME” is defined as 1,2-dimethoxyethane, “THF” is defined as tetrahydrofuran, “RM” is defined as reaction mixture, “RT” is defined as room temperature, “DMF” is defined as N,N-dimethylformamide, DMSO is defined as dimethylsulfoxide, “Et2O” is defined as diethyl ether, “ACN” is defined as acetonitrile, “DIPE” is defined as diisopropyl ether, “TFA” is defined as trifluoroacetic acid, “NH4OH” is defined as ammonium hydroxide, “Pddppf” is defined as 1,1′-bis(diphenylphosphino)ferrocenedichloropalladium, “MP” is defined as melting point.
Preparation of the Intermediate Compounds
Example 1.1
a) Preparation of Intermediate 1




3-Iodo-imidazo[1,2-a]pyridine-7-carboxylic acid hydrazide (1 g, 3.31 mmol) was diluted in EtOH (20 ml). Then, isothiocyanatocyclopropane (0.92 ml, 9.93 mmol) was added and the mixture was heated to 90° C. during 18 hours. The reaction mixture was filtered and washed with EtOH, then Et2O and dried under vacuum, yielding 1.4 g (>100%) of intermediate 1, used as it is in the next step.
b) Preparation of Intermediate 2




A mixture of intermediate 1 (1.33 g, 3.31 mmol) in concentrated H2SO4 (6 ml) was stirred for 30 minutes at RT. The reaction mixture was basified with NaOH (3N) at 0° C. The precipitate was filtered off, washed with acetone, then Et2O and dried, yielding 1.1 g (86%) of intermediate 2, used as it is in the next step.
Example 1.2
a) Preparation of Intermediate 3




1-Bromo-3-isocyanatobenzene (25 ml, 200 mmol) was added dropwise at 5° C. to a solution of 2,2,2-trifluoroethanamine (24.05 ml, 300 mmol) in THF (160 ml). The mixture was stirred at 5° C. then RT for 4 hours. The mixture was evaporated till dryness, yielding 58.8 g (100%) of intermediate 3.
b) Preparation of Intermediate 4




Intermediate 3 (20 g, 67.3 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane (18.8 g, 74.1 mmol) and potassium acetate (19.8 g, 202 mmol) in DMSO (149 ml) was stirred and degassed with N2 for 15 minutes, Pddppf (1.48 g, 2.02 mmol) was added. The mixture was heated at 100° C. for 20 hours. The mixture was poured onto water, EtOAc was added. The mixture was filtered through a pad of celite, the organic layer was separated, washed with water then brine, dried over MgSO4, filtered and evaporated till dryness. The crude product was taken-up by petroleum ether (200 ml) and EtOAc (5 ml), stirred at RT for 45 minutes. The precipitate was filtered, washed with petroleum ether (51 ml) and EtOAc (3 ml) and dried, yielding 20.19 g (87%) of intermediate 4.
Example 1.3
a) Preparation of Intermediate 5




A mixture of 3-fluoro-5-iodobenzenamine (2.7 g, 11.4 mmol) and 4-nitrophenyl chloroformate (2.3 g, 11.34 mmol) in THF (30 ml) was heated at 60° C. for 1 hour, then allowed to cool down to RT. N,N-diisopropylethylamine (1.9 ml, 11.4 mmol) then 2,2,2-trifluoroethanamine (1 ml, 12.53 mmol) were added dropwise at RT. The mixture was heated at 60° C. for 2 hours. The mixture was poured onto ice water and EtOAc was added. The organic layer was washed successively with 10% K2CO3 aqueous solution, 3N HCl aqueous solution and water. The organic layer was separated, dried (MgSO4), filtered and the solvent was evaporated. The crude product was crystallized from DIPE. The precipitate was filtered and dried under vacuum, yielding 3.2 g (78%) of intermediate 5.
b) Preparation of Intermediate 6




Intermediate 5 (3.2 g, 8.84 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane (2.47 g , 9.72 mmol) and potassium acetate (2.6 g, 26.52 mmol) in DMSO (40 ml) was stirred and degassed with N2 for 15 minutes. Pddppf (194 mg, 0.26 mmol) was added. The mixture was heated at 100° C. for 3 hours. The mixture was poured onto water. EtOAc was added and the mixture was filtered through of pad of celite. The organic layer was separated, washed with water, then brine, dried over MgSO4, filtered and evaporated to dryness. The crude product was taken-up with petrol ether, stirred at RT for 45 minutes, the precipitate was filtered and dried under vacuum, yielding 2.6 g (81%) of intermediate 6.




Intermediate 7 used in preparation Example B1b was made according to preparation Example 1.3.
Example 1.4
a) Preparation of Intermediate 8




A solution of 7-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)imidazo[1,2-a]pyridine (12.1 g, 49.6 mmol), 4-chloro-2-(trifluoromethyl)pyrimidine (8.24 g, 45.1 mmol), Cs2CO3 (44.1 g, 135.4 mmol) in toluene (190 ml), 1-butanol (190 ml) and H2O (50 ml) was degassed with N2 for 20 minutes. Tetrakis(triphenylphosphine)palladium (7.8 g, 6.7 mmol) was added and the mixture was heated at 80° C. (bath at 85° C.) for 2 hours under N2. The mixture was poured onto ice-water and filtered over a pad of celite which was rinced with EtOAc. The filtrate was extracted with EtOAc. The organic layer was washed with water (twice), dried over MgSO4, filtered and evaporated to dryness. The crude product was taken up into Et2O. The precipitate was filtered and dried, yielding 15.7 g (88%) of intermediate 8. MP=212° C. (kofler).
b) Preparation of Intermediate 9




1-Iodo-2,5-pyrrolidinedione (6.06 g, 26.9 mmol) was added portionwise to a solution of intermediate 8 (5.93 g, 22.44 mmol) in DMF (60 ml) at RT. The reaction mixture was stirred at RT for 2 hours. The reaction mixture was poured onto ice water. The precipitate was filtered, washed with water, then Et2O, and dried under vacuum, yielding 8.75 g (100%) of intermediate 9.
Example 1.5
a) Preparation of Intermediate 10




4-Amino-2-chloro-5-pyrimidinecarbonitrile (5 g, 32.35 mmol) and 7-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)imidazo[1,2-a]pyridine (9.48 g, 38.82 mmol) in dioxane (250 ml) were stirred under nitrogen. A solution of K3PO4 (13.73 g, 64.70 mmol) in H2O was added and the mixture was degassed with vacuum /nitrogen (×3). Pddppf (1.18 g, 1.62 mmol) was added and then the mixture was degassed with vacuum/nitrogen (×3). The RM was heated for 2 hours at 80° C. The RM was cooled to RT and concentrated under vacuum. Acetone was added and the precipitate was filtered, washed with water, acetone, then Et2O and dried yielding 6.8 g (89%) of intermediate 10.
b) Preparation of Intermediate 11




1-Iodo-2,5-pyrrolidinedione (2.86 g, 12.7 mmol) was added portionwise to a solution of intermediate 10 in CH3CN at RT. The RM was stirred at RT for 2 hours and then refluxed overnight. The RM was filtered hot and the precipitate was washed with ACN, then Et2O and dried under vacuum, yielding 3 g (98%) of intermediate 11.




Intermediate 12 used in preparation Example B1b was made according to preparation Example 1.5.
Example 1.6
a) Preparation of Intermediate 13




a-1) using a Heck Coupling
A mixture of 7-chloro imidazopyridine (5 g, 32.77 mmol), intermediate 3 (10.22 g, 34.41 mmol;), triphenylphosphine (1.72 g, 6.55 mmol;), cesium carbonate (21.35 g, 65.54 mmol), Palladium(II) acetate (0.74 g; 3.28 mmol) in DMF (70 ml) was stirred at RT under N2 flow. After 10 minutes, the mixture was heated at 100° C. for 2 hours. The RM was cooled to RT and poured onto ice water. EtOAc was added and the mixture was filtered through a pad of celite which was washed with EtOAc. The filtrate was extracted with EtOAc, washed with brine, dried (MgSO4), filtered and the solvent was evaporated.
The residue (15 g) was purified by silica gel chromatography on Irregular SiOH 20-45 μm 1000 g MATREX, Mobile phase (DCM/MeOH/NH4OH: 97/3/0.1). The pure fractions were collected, and the solvent evaporated under reduced pressure.
The residue was triturated in Et2O, filtered and dried under vacuum at 40° C., yielding 6.80 g (56%) of intermediate 13. MP=188° C., DSC.
a-2) using a Suzuki Coupling
A mixture of 3-iodo-7-chloro imidazopyridine (10 g; 35.9 mmol;), intermediate 4 (14.8 g, 43.1 mmol), potassium phosphate (15.2 g; 71.8 mmol) in water (51 ml) and dioxane (192 ml) was stirred at RT and degassed with a N2 flow. After 30 minutes, Pddppf (1.31 g, 1.8 mmol) was added portionwise at RT under N2 flow. The RM was heated at 80° C. overnight. The reaction was cooled to RT and poured onto ice-water. The aqueous layer was extracted with EtOAc, dried over MgSO4, filtered and concentrated. The residue was purified by silica gel chromatography on Irregular SiOH 20-45 μm 1000 g MATREX, Mobile phase (DCM/MeOH/NH4OH: 95/5/0.5). The pure fractions were collected, concentrated to afford, after drying, 13.3 g (100%) of intermediate 13.
b) Preparation of intermediate 14




A mixture of intermediate 13 (3 g, 8.14 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane [73183-34-3] (6.2 g, 24.41 mmol), tricyclohexylphosphine (0.91 g, 3.25 mmol), potassium acetate (3.19 g, 32.54 mmol) in dioxane (40 ml) was stirred at RT under a N2 flow. After 10 minutes, tris(dibenzylideneacetone)-dipalladium (1.12 g, 1.22 mmol) was added portionwise at RT. The RM was heated at 90° C. overnight and then cooled to RT and poured onto ice water. EtOAc was added and the mixture was filtered through a pad of celite. The celite was washed with EtOAc, then the filtrate was extracted with EtOAc. The organic layer was washed with brine, dried (MgSO4), filtered and the solvent was evaporated. The residue was taken up with DIPE, stirred overnight. The precipitate was filtered, dried under vacuum, yielding 3 g (80%) of intermediate 14.




Intermediate 15 used in preparation Example B5 was obtained in a reaction procedure similar to preparation Example 1.6.
Example 1.7
a) Preparation of Intermediate 16




Ethyl 4-amino-2-chloropyrimidinecarboxylic acid, ester (1.10 g, 5.43 mmol) and intermediate 14 (3 g, 6.52 mmol) in dioxane (125 ml) were stirred under nitrogen. A solution of K3PO4 (2.31 g, 10.86 mmol) in H2O (30 ml) was added and the mixture was degassed with vacuum/nitrogen (×3). Pddppf (198.72 mg, 0.27 mmol) was added and then the mixture was degassed with vacuum/nitrogen (×3). The RM was heated for 3 hours at 80° C., then cooled to RT, diluted with EtOAc and a 10% solution of K2CO3 was added. The organic layer was decanted, washed with brine, dried over MgSO4, filtered and evaporated to dryness. The residue (5.4 g) was crystallized from CH2Cl2/MeOH. The precipitate was filtered off, washed with CH3CN and dried, yielding 1.9 g (70%) of intermediate 16.
b) Preparation of Intermediate 17




Lithium aluminium hydride solution 1M in THF (3.0 ml, 3.00 mmol) was added dropwise at RT to a suspension of intermediate 16 (500 mg, 1.00 mmol) in THF. The RM was stirred at RT for 3 hours. 0.25 ml of iced water was added with caution, followed by 0.25 ml of NaOH 3N and 0.75 ml of water. The salts were removed by filtration over a büchner and washed with EtOAc. The filtrate was evaporated to dryness. The residue was taken up with DCM/MeOH 90/10 and the precipitate was filtered off and dried, yielding 300 mg (65%) of intermediate 17.
MP=235° C.
c) Preparation of Intermediate 18




Methanesulfonyl chloride (166 μl, 2.15 mmol) was added dropwise at RT to a suspension of intermediate 17 (490 mg, 1.07 mmol) and N,N-diethylethanamine (312 μl, 2.25 mmol) in a 50/50 mixture of DCM/THF (20 ml). The RM was stirred at RT for 1 hour, and directly used in the next step without further work-up.
Example 1.8
a) Preparation of Intermediate 19




Methyl 3-iodo-imidazo[1,2-a]pyridine-7-carboxylic acid, ester and intermediate 4 (5.47 g, 15.89 mmol) in dioxane (136 ml) were stirred under nitrogen. A solution of K3PO4 (5.62 g, 26.48 mmol) in H2O (30 ml) was added and the mixture was degassed with vacuum/nitrogen (×3). Pddppf (484.47 mg, 0.66 mmol) was added and then the mixture was degassed with vacuum/nitrogen (×3). The RM was heated overnight at 80° C. under nitrogen. The RM was cooled to RT, diluted with DCM/MeOH and quenched with water. The organic layer was decanted, washed with brine, dried over MgSO4, filtered and evaporated to dryness. The residue was purified by silica gel chromatography (90 g SiO2 15/40 μm, eluent: DCM/MeOH/NH4OH 100/0/0 to 96/4/0.1). The pure fractions were collected and the solvent was evaporated to dryness, yielding 4.17 g (80%) of intermediate 19.
b) Preparation of Intermediate 20




Lithium hydroxide monohydrate (0.65 g, 15.52 mmol) was added to a solution of intermediate 19 (4.06 g, 10.35 mmol) in THF (83 ml) and H2O (9 ml). The RM was stirred at RT overnight. HCl 3N was added and the RM was evaporated to dryness. The solid residue was taken up with water. The precipitate was filtered off, washed with Et2O and dried under vacuum, yielding 3.91 g (100%) of intermediate 20. MP=222° C.
c) Preparation of Intermediate 21




Intermediate 20 (0.5 g, 1.3 mmol), N,N-diethylethanamine (378 μl, 02.6 mmol), 1-[bis(dimethylamino)methylene]-1H-benzotriazoliumhexafluorophosphate(1-) 3-oxide (0.75 g, 1.98 mmol) and a 10/1 mixture of THF/DMF (20 ml) were mixed at RT. Then, thiosemicarbazide (0.24 g, 2.64 mmol) was added and the mixture was stirred for 4 hours. The reaction mixture was partitioned between DCM (50 ml) and water (30 ml). The organic layer was dried over MgSO4, filtered and concentrated, yielding 0.8 g (>100%) of intermediate 21.
Example 1.9
a) Preparation of Intermediate 22




1H-Imidazole (1 g, 14.7 mmol) was dissolved in DMF (20 ml). Then, the solution was cooled down to 0° C. and sodium hydride (646 mg, 16.1 mmol) was added. After 30 minutes stirring, (2-bromoethoxy)(tert-butyl)dimethyl silane (4.2 g, 17.6 mmol) was added and the reaction was stirred overnight allowing the temperature to raise to RT. The RM was partitioned between water (100 ml) and EtOAc (200 ml). Then the organic layer was washed twice with a saturated NaCl solution (100 ml), dried over MgSO4, filtered and concentrated. The residue was purified by silica gel chromatography (DCM/MeOH/NH4OH: 100/0/0 to 95/5/0.5). The pure fractions were collected and the solvent was evaporated, yielding 3.03 g (86%) of intermediate 22.
b) Preparation of Intermediate 23




Intermediate 22 (1 g, 4.41 mmol), N,N,N′,N′-tetramethylethylenediamine (1.68 ml, 11.02 mmol) were dissolved in THF (10 ml). The solution was cooled down to −78° C. and butyllithium 1.6M in hexane (6.9 ml, 11.0 mmol) was added dropwise. The RM was stirred for 1.5 hour allowing the temperature to raise to −30° C. Then, iodine (2.94 g , 11.5 mmol) in THF (10 ml) was added keeping the temperature below −30° C. The reaction was quenched with a 10% Na2S2O5 aqueous solution and diluted with EtOAc (150 ml). The organic layer was washed with 10% Na2S2O5 aqueous solution (100 ml) and water (100 ml), then dried over MgSO4, filtered and concentrated. The residue was purified by silica gel chromatograpy (Cyclohexane/EtOAc:5/5). The pure fractions were collected and the solvent was evaporated, yielding 0.8 g (51%) of intermediate 23.
c) Preparation of Intermediate 24




To a mixture of intermediate 23 (0.8 g, 2.27 mmol) N,N-diethylethanamine (6.3 ml, 45.4 mmol), CuI (44 mg, 0.23 mmol), dichlorobis(triphenylphosphine)palladium (160 mg, 0.23 mmol) and THF (4 ml) previously degassed under vacuum and refilled with N2, was added trimethylsilylacetylene (1.65 ml, 11.3 mmol). The RM was stirred at RT overnight, filtered over a pad of celite and the filtrate was diluted with EtOAc (200 ml). The organic layer was washed several times with a saturated aqueous NH4Cl solution (5×50 ml until pH=7), dried over MgSO4, filtered and concentrated. The residue was purified by silica gel chromatography (EtOAc/cyclohexane:2/8 to 4/6). The pure fractions were collected and the solvent was evaporated, yielding 0.138 g (23%) of intermediate 24.
d) Preparation of Intermediate 25




7-Chloro-imidazo[1,2-a]pyridine (63 mg, 0.41 mmol), intermediate 24 (146 mg, 0.4 mmol), Cs2CO3 (134 mg, 0.41 mmol), 1,8-diazabicyclo[5.4.0]undec-7-ene (7 μl, 0.07 mmol) in DMF (1.1 ml) were introduced in a tube. The mixture was degassed with N2 and dichlorobis(triphenylphosphine)palladium (6 mg, 0.008 mmol) and tri-tert-butylphosphine (5 μl, 0.016 mmol) were quickly introduced. The mixture was degassed again with N2. Then, it was heated at 150° C. in a microwave for 12 minutes. The RM was partitioned between EtOAc (50 ml) and water (25 ml). The organic layer was washed with brine (25 ml), dried over MgSO4, filtered and concentrated, yielding 0.16 g (>100%) of intermediate 25, used in the next without further purification.
e) Preparation of Intermediate 26




N-iodosuccinimide (0.1 g, 0.45 mmol) was added portionwise to intermediate 25 (0.15 g, 0.41 mmol) in DMF (2 ml) at RT. The RM was stirred for 5 hours at RT. Then, additional N-iodosuccinimide (48 mg, 0.21 mmol) was added and the RM was stirred overnight at RT. Water (50 ml) and EtOAc (100 ml) were added to the mixture. After decantation, the organic layer was washed with brine (50 ml), then dried over MgSO4, filtered and concentrated, yielding 0.23 g (>100%) of intermediate 26, used in the next step without further purification.
f) Preparation of Intermediate 27




A solution of intermediate 26 (210 mg, 0.43 mmol), intermediate 4 (176.11 mg, 0.51 mmol) and K3PO4 (181.05 mg, 0.85 mmol) in dioxane (11.7 ml) and H2O (3 ml) was degassed for few minutes with nitrogen. Then Pddppf (34.81 mg, 0.043 mmol) was added. The RM was heated to 80° C. for 5 hours. Then the RM was partitioned between water (50 ml) and EtOAc (100 ml). The organic layer was dried over MgSO4, filtered and concentrated, yielding 0.35 g (>100%) of intermediate 27, used in the next step without further purification.
Example 1.10
a) Preparation of Intermediate 28




A mixture of 7-chloro-imidazo[1,2-a]pyridine (1.5 g, 8.06 mmol), N-(3-bromophenyl)-N′-ethyl-urea (2.25 g, 9.27 mmol) and Cs2CO3 (5.25 g, 16.12 mmol) in DMSO (20 ml) was deoxygenated by evacuation/refill with N2 (×3). Triphenylphosphine (422.88 mg, 1.61 mmol) and palladium (II) acetate 47% Pd (180.98 mg, 0.81 mmol) were added and the mixture was deoxygenated again (×3) then stirred and heated at 100° C. for 4 hours. The RM was cooled to RT and poured onto ice water. The RM was stirred for 1 hour and the precipitate was filtered off. The residue was dissolved in DCM/MeOH. The organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue was purified by silica gel chromatography (90 g SiO2 15/40 μm, eluent: DCM/MeOH/NH4OH 100/0/0 to 95/5/0.5). The pure fractions were collected and evaporated to dryness yielding 1.8 g (71%) of intermediate 28.
b) Preparation of Intermediate 29




A mixture of intermediate 28 (1.9 g, 6.04 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane (4.6 g, 18.11 mmol), potassium acetate (2.37 g, 24.14 mmol) in dioxane (20 ml) was stirred at RT and degassed for 15 minutes under a N2 flow. Tricyclohexylphosphine (677 mg, 2.41 mmol) then tris(dibenzylideneacetone)dipalladium (829 mg, 0.90 mmol) were added at RT. The RM was heated at 90° C. overnight, cooled to RT and poured onto ice water. EtOAc was added and the mixture was filtered through a pad of celite, which was washed with EtOAc. The organic and the aqueous layers were separated. The aqueous layer was extracted with EtOAc. The organic layers were combined, washed with brine, dried (MgSO4), filtered and the solvent was evaporated. The residue was triturated with DIPE, filtered and dried, yielding 990 mg (40%) of intermediate 29.
c) Preparation of Intermediate




A solution of intermediate 14 (1 g, 2.17 mmol), intermediate 42 (1.3 g, 4.34 mmol), Cs2CO3 (2.12 g, 6.52 mmol) in toluene (20 ml), 1-butanol (5 ml) and H2O (20 ml) were degassed with N2 for 20 minutes. Tetrakis(triphenylphosphine)palladium (0.75 g, 0.65 mmol) was added and the mixture was heated at 80° C. for 20 hours under N2. The mixture was poured onto H2O and extracted with EtOAc. The organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue was purified by silica gel chromatography Irregular SiOH 20-45 μm 450 g MATREX, Mobile phase (DCM/MeOH/NH4OH 96/4/0.1). The pure fractions were collected and the solvent was evaporated, yielding 0.645 g (54%) of intermediate 30.
Example 1.11
a) Preparation of Intermediate 31




A mixture of 5-bromo-3-pyridinamine (2 g, 0.012 mol) and 4-nitrophenyl chloroformate (3.03 g, 0.015 mol) in THF (20 ml) was heated at 60° C. for 2 hours. The mixture was cooled to RT and 2,2,2-trifluoro-ethanamine (1.02 ml, 0.013 mol) then N-ethyl-N-(1-methylethyl)-2-propanamine (5.73 ml, 0.035 mol) were added. The mixture was stirred at RT for 1 hour. The mixture was poured onto 2N NaO and extracted with DCM. The organic layer was washed with water and brine, dried over MgSO4, filtered and evaporated till dryness. The residue was crystallized from Et2O, yielding 2.64 g (76%) of intermediate 31. MP 188° C. (Kofler).
b) Preparation of Intermediate 32




A mixture of intermediate 31 (1.58 g, 5.3 mmol), 4,4,4′,4′,5,5,5′,5′-octamethyl-2,2′-bi-1,3,2-dioxaborolane (2.69 g, 10.6 mmol), potassium acetate (1.56 g, 15.9 mmol) in DMSO (13.6 ml) was stirred at RT under a N2 flow (bubbling). After 30 minutes, Pddppf (388 mg, 0.53 mmol) was added and the mixture was heated at 80° C. for 16 hours. The RM was cooled to RT, diluted with EtOAc (200 ml) and poured onto water (150 ml). The mixture was filtered through a pad of celite (the celite was washed with EtOAc). After decantation and separation, the organic layer was washed with a saturated NaCl solution (2×150 ml) and water 1×150 ml). The organic layer was dried over MgSO4, filtered and concentrated. This residue was triturated with a 50/50 mixture of Et2O/petroleum ether, yielding 1.4 g (77%) of intermediate 32.
c) Preparation of Intermediate 33




K3PO4 (1.06 g, 4.98 mmol) was dissolved in H2O (3.9 ml). The resulting solution was added to intermediate 32 (1.29 g; 3.74 mmol) and 7-chloro-3-iodo-imidazo[1,2-a]pyridine (0.69 g ; 2.49 mmol) in dioxane (14.2 ml) under N2 flow. The resulting mixture was degassed with N2 for 30 minutes. Then, Pddppf (0.091 g, 0.00012 mol) was added and the RM was heated at 80° C. overnight under N2 flow. The RM was poured onto ice water and extracted with EtOAc. The organic layer was washed twice with a saturated aqueous NaCl solution, then dried over MgSO4, filtered and evaporated till dryness. The residue was purified by flash chromatography over silica gel (15-40 μm, 90 g, DCM/MeOH/NH4OH: 100/0/0 to 85/15/0.5) The pure fractions were collected and evaporated to dryness, yielding 0.82 g (89%) of intermediate 33.
Example 1.12
a) Preparation of Intermediate 34




1-(1-methylethyl)-1H-imidazole (330 mg, 3.00 mmol) was dissolved in THF (2,5 ml) at RT and the resulting solution was cooled down to −78° C. Butyllithium 1.6 M in hexane (1.87 ml, 3.00 mmol) was added dropwise. After completion of the addition, the temperature was increased to 0° C. and the RM was stirred at this temperature for 5 minutes. Then, the RM was cooled at −78° C. and a solution of iodine (844.81 mg, 3.30 mmol) in THF (5 ml) was added dropwise. Again, the temperature was increased to 0° C. and the RM was stirred for 20 minutes at this temperature followed by quenching with a 10% solution of Na2S2O3. The RM was extracted with DCM. The organic layer was washed with water, dried over MgSO4, filtered and concentrated, yielding 500 mg (71%) of intermediate 34.
b) Preparation of Intermediate 35




Trimethylsilylacetylene (4.46 ml, 31.35 mmol) was added to a mixture of intermediate 34 (1.48 g, 6.27 mmol), N,N-diethylethanamine (17.45 ml, 125.40 mmol), dichlorobis(triphenylphosphine)palladium (440.08 mg, 0.63 mmol) and CuI (119.41 mg, 0.63 mmol) in THF (11 ml) previously degassed under vacuum and refilled with N2. The mixture was stirred at RT overnight. The RM was filtered and the salts were washed with Et2O. The filtrate was evaporated to dryness. The residue was taken up with Et2O, the salts were filtered again, and the filtrate evaporated, yielding 2 g of intermediate 35, which was used in the next step without further purification.
Example 1.13
a) Preparation of Intermediate 36




Methyl 2-amino-4-pyridinecarboxylic acid, ester (20 g, 131.5 mmol), 2-chloroacetaldehyde 50% wt solution in water (22.5 ml, 197.2 mmol), NaH2CO3 (22.1 g, 262.9 mmol) in EtOH (200 ml) were stirred at 80° C. for 4 hours under nitrogen. After cooling down to RT, water was added and EtOH was evaporated. The residue was extracted twice from DCM. The organic layer was dried over MgSO4, filtered and evaporated, yielding 20.9 g of intermediate 36. The crude product was used in the next step without further purification.
b) Preparation of Intermediate 37




Hydrazine monohydrate (20.3 ml, 65.3 mmol) was added to a solution of intermediate 36 (11.5 g, 65.28 mmol) in MeOH (300 ml). The mixture was refluxed for 3 hours then hydrazine monohydrate (10 ml, 454 mmol) was added and the mixture was stirred at reflux overnight. After cooling down to RT, the precipitate was filtered off, washed with a few EtOH and dried, yielding 7.2 g (63%) of intermediate 37, used in the next step without further purification.
c) Preparation of Intermediate 38




Intermediate 37 (7,2 g; 40.87 mmol) and H2SO4 (0.23 ml) in 1,1,1-triethoxyethane (202 ml) were heated at 80° C. overnight. After cooling down to RT, the precipitate was filtered off, washed with EtOH and dried to afford solid 1. Water and DCM were added to the filtrate and the organic layer was washed with water, dried over MgSO4, filtered and concentrated to afford solid 2. Solids 1 and 2 were mixed, taken up in EtOH (the minimum) and filtered to afford 7.2 g (88%) of intermediate 38. Concentration of the filtrate followed by another filtration gave an additional amount of 0.92 g (11%) of intermediate 38.
d) Preparation of Intermediate 39




A mixture of intermediate 38 (3.5 g, 14.34 mmol), 3-iodobenzenamine (1.7 ml, 14.34 mmol) and Cs2CO3 (9.34 g, 28.67 mmol) in DMSO (20 ml) was desoxygenated by evacuation/refill with N2 (×3). Triphenylphoshpine (0.75 g, 2.87 mmol) and palladium (II) acetate 47% Pd (0.3 g, 1.43 mmol) were added and the mixture was desoxygenated again (×3) then stirred and heated at 100° C. for 4 hours. Water and EtOAc were added and the mixture was filtered over a pad of celite which was washed with DCM. The organic layer was washed with water, dried over MgSO4, filtered and evaporated, yielding 540 mg (13%) of intermediate 39, directly used in the next step without further purification.
Example 1.14
a) Preparation of Intermediate 40




A mixture of 3-(phenylmethoxy)propanal (4.5 g, 27.40 mmol) and thiosemicarbazide (2.48 g, 27.40 mmol) in EtOH (50 ml) was refluxed for 2 hours. The mixture was evaporated until dryness. The residue was crystallized from DIPE. The precipitate was filtered off and dried, yielding 5.4 g (83%) of intermediate 40.
b) Preparation of Intermediate 41




FeCl3 (18.62 ml, 68.26 mmol) was added dropwise to a solution of intermediate 40 (5.4 g, 22.75 mmol) in H2O (60 ml). The mixture was heated at 90° C. for 2 hours. The mixture was evaporated until dryness and the residue was treated with an aqueous solution of NH4OH. The mixture was extracted with DCM. An insoluble was filtered off. The organic layer was separated, dried over MgSO4, filtered, and the solvent was evaporated, yielding 3.9 g (73%) of intermediate 41.
c) Preparation of Intermediate 42




HBr (34 ml) was added to a solution of intermediate 41 (3.4 g, 14.45 mmol) in H2O (34 ml). The mixture was cooled to 0° C. and CuHBr (0.21 g, 1.44 mmol) was added. A solution of NaNO2 (1.0 g 14.45 mmol) in H2O (34 ml) was added dropwise. The mixture was stirred for 10 minutes at 5° C. and was allowed to reach RT. The mixture was stirred at RT for 2 hours. The solution was poured onto H2O, basified with K2CO3 (until the pH of the mixture reached 8) and extracted with DCM. The organic layer was separated, dried over MgSO4, filtered and evaporated to dryness. The residue (5.4 g) was purified by silica gel chromatography (SiO2 15-40 μm DCM 100%). The pure fractions were collected and the solvent was evaporated, yielding 2.9 g (67%) of intermediate 42.
Example 1.15
Preparation of Intermediate 44




HCl (50 ml) was added dropwise to a solution of intermediate 43




(1.96 g, 4.98 mmol) (was prepared according to a reaction procedure similar to Example B1a) in MeOH (50 ml). The mixture was stirred at 50° C. for 2 hours. The solution was cooled to RT, poured onto H2O, basified with 10% aqueous solution of K2CO3 and extracted with DCM. The organic layer was separated, dried over MgSO4, filtered and evaporated to dryness. The residue was taken up with DIPE/EtOAc, filtered and dried under vacuum yielding 1.1 g (75%) of intermediate 44.
Example 1.16
a) Preparation of Intermediate 45




A mixture of 7-chloro-imidazo[1,2-a]pyridine (200 mg, 1.08 mmol), 1,1-dimethylethyl N-(3-iodophenyl)carbamic acid, ester (0.40 g, 1.24 mmol) and Cs2CO3 (0.7 g, 2.15 mmol) in DMSO (2.5 ml) was deoxygenated by evacuation /refill with N2 (×3). Triphenylphoshpine (56.38 mg, 0.22 mmol) and palladium (II) acetate 47% Pd were added and the mixture was deoxygenated again (×3), then stirred and heated at 100° C. in a sealed tube for 4 hours. The RM was cooled to RT and poured onto water. The precipitate was filtered and washed several times with water, then dissolved in EtOAc. The organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue (480 mg) was purified by silica gel chromatography (30 g SiO2 15/40 μm—eluent: DCM/MeOH/NH4OH 97/3/0.3). The pure fractions were collected and evaporated to dryness, yielding 255 mg (69%) of intermediate 45.
b) Preparation of Intermediate 46




Intermediate 45 (3.2 g, 9.3 mmol), 5-ethynyl-1-methyl-1H-imidazole (4.94 g, 46.5 mmol), Cs2CO3 (6.06 g, 2.90 mmol), palladium(11)cloride (0.17 mg, 0.93 mmol), tricylcohexylphosphine (0.52 mg, 1.86 mmol) and DMSO (29 ml) were mixed together and the mixture was degassed 5 times under vacuum. Then, the mixture was heated for 2 hours at 100° C. The RM was partitioned between water (150 ml) and EtOAc (150 ml) and the resulting suspension was filtered over a pad of celite. The organic layer was washed with aqueous saturated NaCl solution (150 ml), dried over MgSO4, filtered and concentrated. The residue was purified by silica gel chromatography (200 g SiO2 15/40) (DCM/MeOH/NH4OH: 100/0/0 to 98/2/0.2 in 10 minutes then 98/2/0.2 for 5 minutes then 97/3/0.3 in 5 minutes and 7/3/0.3 for 20 minutes). The desired fraction was collected and the solvent was evaporated, yielding 1.1 g (29%) of intermediate 46.
c) Preparation of Intermediate 47




HCl (1.1 g, 2.66 mmol) was added dropwise to a solution of intermediate 46 (3 ml) in MeOH (11 ml), and the RM was stirred at 50° C. for 2 hours. The RM was cooled to RT, diluted with DCM and quenched with a 10% solution of K2CO3 at 0° C. The organic layer was decanted, dried over MgSO4, filtered and evaporated to dryness, yielding 0.78 g (93%) of intermediate 47.
d) Preparation of Intermediate 48




A mixture of intermediate 47 (0.75 g, 2.39 mmol) and 4-nitrophenylchloroformate (0.48 g, 2.39 mmol) in THF (37.5 ml) was heated at 60° C. for 2 hours and allowed to cool to RT for 5 hours. The precipitate was filtered, washed with THF then Et2O and dried under vacuum, yielding 1.1 g (99%) of intermediate 48.
Preparation of the Final Compounds
Example 2.1
a 1) Preparation of compound 250




A solution of intermediate 2 (1.1 g, 2.87 mmol), intermediate 4 (1.18 g, 3.44 mmol), K3PO4 (1.22 g, 5.74 mmol) in dioxane (75 ml) and H2O (20 ml) was degassed for a few minutes with nitrogen. Then Pddppf (0.12 g, 0.14 mmol) was added. The RM was heated to 80° C. for 4 hours. The RM was concentrated under vacuum. The precipitate was taken up with a 10% aqueous solution of K2CO3, then washed with MeOH and air dried. The residue was purified by silica gel chromatography (Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (DCM/MeOH/NH4OH 93/7/0.5). The pure fractions were collected and the solvent was evaporated to dryness. The residue was taken up with ACN, then the precipitate was filtered off and dried, yielding 177 mg (13%) of compound 250. MP>280° C. (kofler).
a 2) Preparation of Compound 251




A solution of intermediate 9 (400 mg, 1.02 mmol), intermediate 6 (412 mg, 1.14 mmol) and K3PO4 (484 mg, 2.28 mmol) in dioxane (25 ml) and H2O (5 ml) was degassed for 15 minutes with nitrogen. Then Pddppf (93 mg, 0.11 mmol) was added. The RM was heated to 80° C. for 2 hours. The mixture was cooled to RT, water and EtOAc were added. It was then filtered throught a pad of celite. The filtrate was extracted with EtOAc, washed with brine, dried over MgSO4, filtered and evaporated to dryness. The residue was purified by achiral super critical fluid chromatography on AMINO 6 μm 150×21.2 mm, Mobile phase (0.3% isopropylamine, 60% CO2, 40% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was crystallized from DIPE and the yellow precipitate was filtered, dried under vacuum, yielding 111 mg (19%) of compound 251. MP=263° C. (DSC).
1:21 Preparation of Compound 252




A solution of intermediate 12 (400 mg; 1.13 mmol), intermediate 7 (548 mg; 1.46 mmol) in dioxane (15 ml) was degassed by bubbling N2 through. K3PO4 (478 mg; 2.25 mmol), Pddppf (19 mg, 0.022 mmol), H2O (5 ml) and EtOH (2 ml) were added under N2 flow. The mixture was heated at 80° C. for 5 hours. The solution was poured onto ice-water and filtered over a pad of celite. The product was extracted with EtOAc. The organic layer was dried over MgSO4 and evaporated to dryness. The crude product was crystallized from DCM to give a crude product 1. The filtrate was evaporated to give a crude product 2. Both product 1 and 2 were purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (0.5% NH4OH, 97% DCM, 3% MeOH). The pure fraction was collected and the solvent was evaporated, yielding 35 mg (7%) of compound 252. MP=154° C. (DSC).
Example 2.2
a) Preparation of Compound 253




A mixture of intermediate 14 (0.8 g, 1.74 mmol), 2-chloro-4-pyrimidinecarbonitrile (0.48 g, 3.48 mmol), Na2CO3 (4 ml) in 1,2-dimethoxyethane (15 ml) was stirred at RT and degassed with N2 for 30 minutes. Tetrakis(triphenylphosphine)palladium (0.15 g, 0.13 mmol) was added and the mixture was heated at 130° C. for 30 minutes. The reaction was performed in a microwave device (Biotage 60). The mixture was poured onto water and filtered through a pad of celite. The organic layer was extracted with DCM, separated, dried, filtered, concentrated to dryness and purified by Normal phase on (Cartridge 15-40 μm 30 g). Mobile phase (0.5% NH4OH, 96% DCM, 4% MeOH). The desired fraction was collected and the solvent was evaporated. The residue was crystallized from DIPE, the precipitate was filtered, dried under vacuum, yielding 0.149 g (20%) of compound 253. MP=210° C. (kofler).
b) Preparation of Compound 165B




Intermediate 14 (1 g, 2.17 mmol), 4-amino-2-chloro-5-pyridinecarbonitrile (0.5 g, 3.26 mmol) and sodium carbonate (2.3 g, 21.7 mmol) were diluted in DME (20 ml) and water (10 ml). The resulting mixture was degassed under a N2 flow for 10 minutes. Then, tetrakis(triphenylphosphine)palladium (0.25 g, 0.22 mmol) was added and the RM was heated at 80° C. for 4 hours. Then, it was cooled to RT. Water was added and DME was concentrated. The insoluble was filtered, washed with water and poured onto DCM. The precipitate was then stirred for 3 hours, filtered and the filtrate was evaporated to dryness. The resulting residue was poured onto DCM/MeOH (8/2), stirred for 2 hours. The precipitate was filtered, dried and purified by Reverse phase on X-Terra-C18 10 μm 19×150 mm, Mobile phase (Gradient from 20% NH4HCO3 0.5% (pH 10), 80% ACN to 0% NH4HCO3 0.5% (pH 10), 100% ACN). The desired fraction was collected and the solvent was evaporated. The residue was crystallized from Et2O, the precipitate was filtered and dried under vacuum, yielding 0.052 g of compound 165B. MP=161° C. (DSC).
Example 2.3
a) Preparation of Compound 255




A mixture of 6-chloro-3-pyridazinecarbonitrile (211 mg, 1.43 mmol), intermediate 14 (858 mg, 1.86 mmol), K3PO4 (455 mg, 2.15 mmol), dicyclohexyl(2′,6′-dimethoxy-[1,1′-biphenyl]-2-yl)phosphine (294 mg, 0.72 mmol) in toluene (10 ml) and EtOH (3 ml) was stirred at RT under a N2 flow. After 10 minutes, palladium(II) acetate 47% Pd (97 mg, 0.43 mmol) was added portionwise. Then the mixture was heated at 80° C. for 5 hours. The solution was poured onto ice water and DCM was added. The mixture was filtered through a pad of celite. The filtrate was extracted with DCM, the organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue was purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (0.5% NH4OH, 93% DCM, 7% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was further purified by achiral super critical fluid chromatography on 2 ethylpyridine 6 μm 150×21.2 mm, Mobile phase (0.3% isopropylamine, 80% CO2, 20% EtOH). The desired fraction was collected and the solvent was evaporated. The residue was crystallized from Et2O, yielding 33 mg (5%) of compound 255. MP=267° C.
b) Preparation of compound 256




A mixture of 1,1-dimethylethyl N-[1-(5-bromo-2-pyridinyl)-4-piperidinyl]carbamic acid, ester [(480 mg; 1.35 mmol), intermediate 14 (930 mg; 2.02 mmol), K3PO4 (428 mg; 2.02 mmol), dicyclohexyl(2′,6′-dimethoxy[1,1′-biphenyl]-2-yl)phosphine (277 mg; 0.67 mmol) in toluene (20 ml) and EtOH (6 ml) was stirred at RT under a N2 flow. After 10 minutes, palladium(II) acetate 47% Pd (90.75 mg; 0.40 mmol) was added portionwise. Then the mixture was heated at 80° C. overnight. The solution was poured onto ice water, DCM was added and the mixture was filtered through a pad of celite. The filtrate was extracted with DCM, the organic layer was dried over MgSO4, filtered and evaporated. The residue was purified by Normal phase on Irregular SiOH 20-45 μm 450 g MATREX, Mobile phase (0.5% NH4OH, 92% DCM, 8% MeOH). The desired fraction was collected and the solvent was evaporated, yielding 587 mg (71%) of compound 256. MP=250/255° C. (kofler).
Example 2.4
Preparation of Compound 257




A solution of intermediate 14 (0.60 g, 1.31 mmol), 2-chloro-□,□-dimethyl-5-pyrimidinemethanol (0.34 g, 1.97 mmol), Cs2CO3 (1.25 g, 3.94 mmol) in toluene (13 ml), 1-butanol (13 ml) and H2O (4 ml) was degassed with N2 for 20 minutes. Tetrakis(triphenylphosphine)palladium (0.46 g, 0.39 mmol) was added and the mixture was heated at 80° C. (bath at 85° C.) for 6 hours under N2. The mixture was poured onto H2O and extracted with EtOAc. The organic layer was dried over MgSO4, filtered and evaporated till dryness. The residue was purified by Normal phase on Irregular SiOH 15-40 μm 300 g Merck, Mobile phase (1% NH4OH, 90% DCM, 10% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was further purified by achiral super critical fluid chromatography on 2-ethylpyridine 6 μm 150×21.2 mm, Mobile phase (0.3% Isopropylamine, 75% CO2, 25% EtOH). The pure fractions were collected and the solvent was evaporated, yielding 0.13 (21%) of compound 257. MP=146° C. (kofler).
Example 2.5
Preparation of Compound 258




A mixture of intermediate 15 (520 mg, 1.17 mmol) and 2-chloro-5-fluoro-4-pyrimidinamine (258 mg, 1.75 mmol) in a saturated aqueous solution of Na2CO3 (3 ml) and DME (15 ml) was degassed by bubbling nitrogen through for 15 minutes. Tetrakis(triphenylphosphine)palladium [(67 mg, 0.058 mmol) was added and the mixture was heated at 80° C. for 5 hours. The solution was cooled, poured onto ice water and DCM. The mixture was filtered through a pad of celite and the filtrate was extracted with DCM. The organic layer was dried over MgSO4, filtered and evaporated. The residue was purified by Normal phase on Spherical SiOH 10 μm 60 g PharmPrep MERCK, Mobile phase (0.5% NH4OH, 95% DCM, 5% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was crystallized from DIPE. The product was filtered off, yielding 71 mg (12%) of compound 258. MP=185° C. (kofler).
Example 2.6
Preparation of Compound 259




Azetidine (720 μl, 10.71 mmol.) was added to a 50/50 mixture of a suspension of intermediate 18 (573.66 mg, 1.07 mmol) in THF/DCM (20 ml) and the RM was stirred at 50° C. overnight. The RM was cooled to RT, poured onto water and extracted with EtOAc. The organic layer was decanted, dried over MgSO4, filtered and evaporated to dryness. The residue (800 mg) was purified by Normal phase on Stability Silica 5 μm 150×30.0 mm, Mobile phase (Gradient from 0.3% NH4OH, 97% DCM, 3% MeOH to 1.4% NH4OH, 86% DCM, 14% MeOH). The pure fractions were collected and the solvent was evaporated to dryness. The residue was crystallized from ACN. The precipitate was filtered off and dried, yielding 60 mg (11%) of compound 259. MP=195° C. (kofler).;
Example 2.7
Preparation of Compound 260




A mixture of intermediate 18 (175.65 mg, 0.33 mmol), a solution of N-methylmethanamine in THF 2.0 M (0.25 ml, 0.49 mmol) and Cs2CO3 (320.61 mg, 0.98 mmol) in DMF (3 ml) was stirred at RT overnight. The RM was cooled to RT, poured onto water and extracted with EtOAc. The organic layer was decanted, dried over MgSO4, filtered and evaporated to dryness. The residue was purified by Normal phase on Stability Silica 5 μm 150×30.0 mm, Mobile phase (Gradient from 0.2% NH4OH, 98% DCM, 2% MeOH to 1.3% NH4OH, 87% DCM, 13% MeOH). The pure fractions were collected and the solvent was evaporated to dryness, yielding 23 mg (14%) of compound 260. MP=130° C. (kofler).
Example 2.8
Preparation of Compound 261




Intermediate 21 (0.6 g, 1.33 mmol) was dissolved in H2SO4 (5 ml) at 0° C. and the RM was stirred for 1 hour at RT. The RM was neutralized with NaOH (3N) at 0° C. Then, the precipitate was filtered and was taken up into a 9/1 mixture of DCM/MeOH. The precipitate was filtered, yielding fraction 1 (15 mg). The filtrate was concentrated and taken up into a 1/1 mixture of DCM/Acetone (5 ml). The precipitate was filtered, yielding a fraction 2 (70 mg). Both fraction 1 and 2 were mixed, washed again with 5 ml of a 1/1 mixture of DCM/Acetone. The precipitate was filtered off and dried, yielding 80 mg (14%) of compound 261. MP>260° C. (kofler).
Example 2.9
Preparation of Compound 262




Intermediate 27 (250 mg, 0.43 mmol) was dissolved in THF (5 ml). Then, tetrabutylammoniumfluoride (192 μl, 0.64 mmol) was added and the RM was stirred at RT for 16 hours. Additional tetrabutylammoniumfluoride (100 μl, 0.34 mmol) was added and the RM was stirred for 5 additional hours. Then, it was partitioned between EtOAc (100 ml) and water (50 ml). The organic layer was dried over MgSO4, filtered, concentrated and purified by Normal phase on Stability Silica 5 μm 150×30.0 m, Mobile phase (Gradient from 0.3% NH4OH, 97% DCM, 3% MeOH to 1.4% NH4OH, 86% DCM, 14% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was precipated from CH3CN/MeOH, yielding 0.055 g (27%) of compound 262. MP=228° C. (kofler).
Example 2.10
Preparation of Compound 263




A solution of tribromoborane (2.17 ml, 2.17 mmol) was added to a solution of intermediate 30 (2.17 ml, 2.17 mmol) in DCM (20 ml) at −10° C. The mixture was stirred for 30 minutes. A saturated aqueous solution of NaHCO3 was added at −10° C. The organic layer was separated, washed with brine, dried (MgSO4), filtered and the solvent was evaporated. The residue was purified by Normal phase on Cartridge 15-40 μm 30 g, Mobile phase (97% DCM, 3% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was crystallized in Et2O, yielding 118 mg (23%) of compound 263. MP=230° C. (kofler).
Example 2.11
a) Preparation of Compound 264




A mixture of intermediate 28 (1.8 g, 5.72 mmol), 5-ethynyl-1-methyl-1H-imidazole (2.90 ml, 28.59 mmol) and Cs2CO3 (3.73 g, 11.44 mmol) in dry DMSO (30 ml) was deoxygenated by evacuation/refill with N2 (×3). Tricyclohexylphosphine (320.73 mg, 1.14 mmol) and palladium (II) chloride (102.55 mg, 0.57 mmol) were added and the mixture was deoxygenated again (×3), then stirred and heated at 100° C. under N2 for 2 hours. The RM was cooled to RT, poured onto ice water and extracted with EtOAc. The mixture was filtered over a pad of celite. The filtrate was decanted and the aqueous layer was extracted 3 times more with EtOAc. The pad of celite was then washed with DCM/MeOH 90/10. The combined organic layers were washed with a saturated aqueous solution of NaCl, dried over MgSO4, filtered and evaporated to dryness. The residue (6 g) was filtered over a pad of SiO2 63/200 μm (Eluent: DCM/MeOH 90/10). The fractions were collected and the solvent was evaporated to dryness. The residue was purified by Normal phase on Irregular SiOH 20-45 μm 450 g MATREX, Mobile phase (0.5% NH4OH, 93% DCM, 7% MeOH). The desired fraction was collected, evaporated and taken up in 2 ml of MeOH at RT. Then, ACN was added until precipitation of the compound, yielding 0.42 mg (19%) of compound 264. MP=163° C. (kofler).
b) Preparation of Compound 265




A mixture of intermediate 33 (0.71 g, 1.92 mmol), 5-ethynyl-1-methyl-1H-imidazole (0.97 ml, 9.6 mmol) and Cs2CO3 (1.25 g, 3.84 mmol) in DMSO (7 ml) was deoxygenated by evacuation/refill with N2 (×3). Dichlorobis(tricyclohexylphosphine)palladium (85 mg, 0.12 mmol) was added and the mixture was deoxygenated again (×3), then stirred and heated at 100° C. under N2 for 2 hours. The RM was cooled to RT, quenched with water and extracted with EtOAc. The organic layer was decanted, dried over MgSO4, filtered and evaporated to dryness. The crude was taken up into DOM/MeOH (9/1). The insoluble material removed by filtration was washed with DOM/MeOH (9/1). Then, the filtrate was washed with water and the organic layers were mixed, dried over MgSO4, filtered and evaporated. The residue was purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (0.8% NH4OH, 92% DCM, 8% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was crystallized from MeOH and Et2O, yielding 0.182 g (22%) of compound 265. MP>250° C. (kofler).
c) Preparation of Compound 266




A mixture of intermediate 35 (1.29 g, 6.27 mmol) in DMSO (15 ml) was deoxygenated by evacuation/refill with N2 (×3). Cs2CO3 (2.04, 6.27 mmol) was added and the RM was stirred at RT for 15 minutes. Intermediate 28 (950 mg, 2.58 mmol), tricyclohexylphosphine (175.83 mg, 0.63 mmol) and palladium(II) chloride (56.22 mg, 0.31 mmol) were added and the mixture was deoxygenated again (×3), then stirred and heated at 100° C. under N2 for 1 hour. The RM was cooled to RT, poured onto ice water and extracted with EtOAc. The mixture was filtered over a büchner. The filtrate was decanted and the aqueous layer was extracted 3 times more with EtOAc. The combined organic layers were washed with a saturated aqueous solution of NaCl, dried over MgSO4, filtered and evaporated to dryness. The residue was purified by Normal phase on Stability Silica 5 μm 150×30.0 mm, Mobile phase (Gradient from 0% NH4OH, 100% DCM, 0% MeOH to 0.8% NH4OH, 92% DCM, 8% MeOH). The pure fractions were collected and the solvent was evaporated to dryness, yielding 18 mg (1.5%) of compound 266.
Example 2.12




a) Preparation of Compound 267
To a solution of intermediate 48 (0.48 g, 1.0 mmol) in THF (16 ml) was added N, N-diethylethanamine (168 μl, 1.2 mmol) and a 0.5N solution of NH3 in dioxane (8 ml, 4 mmol). The resulting mixture was stirred at 0° C. for 2 hours. Then, additional 0.5N solution of NH3 in dioxane (4 ml, 2 mmol) was added and the mixture was stirred for 2 more hours. Additional 0.5N solution of NH3 in dioxane (4 ml, 2 mmol) was added again to complete the conversion. The yellow suspension was filtered, yielding fraction 1. The filtrate was diluted with DCM (100 ml) and washed with water (50 ml). The organic layer was dried over MgSO4, filtered and concentrated, yielding fraction 2. Fraction 1 was purified by Reverse phase on X-Bridge-C18 5 μm 30×150 mm, Mobile phase (Gradient from 20% NH4HCO3 0.5% , 80% ACN to 0% NH4HCO3 0.5% , 100% ACN). Fraction 2 was purified by Reverse phase on X-Bridge-C18 5 μm 30×150 mm, Mobile phase (Gradient from 80% NH4HCO3 0.5% , 20% ACN to 0% NH4HCO3 0.5% , 100% ACN). The pure fractions of both purifications were collected, yielding 0.235 g (65%) of compound 267. MP=162° C. (kofler).
Example 2.13
Preparation of Compound 268




To a solution of intermediate 44 (0.28 g, 0.95 mmol) in acetic acid (15 ml), potassium cyanate (0.12 g, 1.43 mmol) was added. The mixture was stirred at RT for 1 hour. The solvent was evaporated and the residue was taken up in DCM/10% aqueous K2CO3. The organic layer was separated, washed with brine, dried (MgSO4), filtered and the solvent was evaporated. The residue was purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (0.5% NH4OH, 97% DCM, 3% MeOH). The pure fractions were collected and the solvent was evaporated. The residue (0.170 g) was crystallized from DIPE/ACN (90/10), the precipitate was filtered and dried under vacuum, yielding 0.142 g (44%) of compound 268. MP=259° C. (kofler).
Example 2.14
a) Preparation of Compound 269




HCl (2.65 ml, 13.2 mmol) was added to a solution of compound 317 (263 mg; 0.44 mmol) in 2-propanol (10.5 ml) at RT. The RM was heated to 50° C. for the time necessary to complete the deprotection and cooled to RT. The precipitate was filtered off, washed with 2-propanol and dried, yielding 110 mg (38%) of compound 269. MP=200° C. (kofler).
b) Preparation of Compound 270




A mixture of compound 269 (223 mg, 0.42 mmol), 2-bromoethanol (105 mg, 0.84 mmol), NaHCO3 (105 mg, 1.26 mmol) in EtOH (7 ml) was stirred at RT overnight, then at 70° C. for 12 hours . H2O and DCM were added. The precipitate was filtered off and dried, yielding fraction 1. The organic layer was washed with a saturated aqueous NaCl solution, dried over MgSO4, filtered and evaporated, yielding fraction 2. The aqueous layer was extracted with DCM using a continuous method to obtain fraction 3 after evaporation.
Fractions 1, 2 and 3 were mixed and purified by Normal phase on Stability Silica 5 μm 150×30.0 mm, Mobile phase (Gradient from 0.3% NH4OH, 97% DCM, 3% MeOH to 1.4% NH4OH, 86% DCM, 14% MeOH). The pure fractions were collected and the solvent was evaporated, yielding 18 mg (8%) of compound 270. MP=179.8° C. (DSC).
c) Preparation of Compound 271




TFA (0.3 ml) was added to a solution of compound 318 (0.11 g, 0.17 mmol) in DCM (3 ml). The solution was stirred at RT for 4 hours, H2O was added and the solution was basified with K2CO3. The aqueous layer was extracted with DCM. The organic layer was dried over MgSO4 and evaporated to dryness. The residue was purified by Reverse phase on E5420 X-Bridge-C18 5 μm 30×150 mm, Mobile phase (Gradient from 80% NH4HCO3 0.5% , 20% ACN to 0% NH4HCO3 0.5% , 100% ACN). The pure fractions were collected and the solvent was evaporated to dryness, yielding 53.2 mg (60%) of compound 271. MP=80° C. (kofler).
d) Preparation of Compound 272




Compound 271 (0.155 g, 0.3 mmol), N,N-dimethyl sulfamoyl chloride (42 μl, 0.4 mmol), N-ethyl-N-(1-methylethyl)-2-propanamine (0.155 ml, 0.9 mmol) in THF (12 ml) were heated at reflux for 24 hours. The solution was cooled and evaporated to dryness. The residue was purified by silica gel chromatography (SiO2: 15-40 μm/30 g, mobile phase: DCM/MeOH/NH4OH: 95/5/0.5. The pure fractions were collected and the solvent was evaporated. The residue was purified again by Reverse phase on E5462 X-Bridge-C18 5 μm 30×150 mm, Mobile phase (Gradient from 60% NH4HCO3 0.5% , 40% ACN to 0% NH4HCO3 0.5% , 100% ACN). The pure fractions were collected and the solvent was evaporated, yielding 31.5 mg (17%) of compound 272. MP=145° C. (kofler).
Example 2.15
Preparation of Compound 273




Compound of Example 102 (210 mg, 0.47 mmol), N,N-dimethyl-4-pyridinamine (12 mg, 0.094 mmol), 2-methylpropyl chloroformate (190 μl, 1.46 mmol) and N,N-diethylethamine (230 μl, 1.65 mmol) in THF (5 ml) were stirred at 70° C. for 24 hours. EtOAc and H2O were added. The organic layer was dried over MgSO4, filtered and evaporated. The residue was purified by Normal phase on Irregular SiOH 15-40 μm 300 g MERCK, Mobile phase (Gradient from 0.2% NH4OH, 98% DCM, 2% MeOH to 1.1% NH4OH, 89% DCM, 11% MeOH). The pure fractions were collected and the solvent was evaporated. The residue was purified again by Reverse phase on X-Bridge-C18 5 μm 30×150 mm, Mobile phase (Gradient from 60% NH4HCO3 0.5%, 40% ACN to 0% NH4HCO3 0.5%, 100% ACN). The desired fraction was collected and the solvent was evaporated, yielding 54 mg (21%) of compound 273. MP=215.2° C. (DSC).
Example 2.16
Preparation of Compound 274




Compound 299 (330 mg , 0.65 mmol) and Ni (396 mg , 6.75 mmol) in NH3 7N in MeOH (50 ml) were hydrogenated under 4 bars pressure at RT in a bomb apparatus overnight. It was then filtered through a pad of celite and evaporated.
The residue was purified by Normal phase on Cartridge 15-40 μm 30 g, Mobile phase (1.2% NH4OH, 88% DCM, 12% MeOH). The pure fractions were collected and the solvent was evaporated, yielding 290 mg (87%) of compound 274. MP=190° C. (DSC)
Example 2.17
Preparation of Compound 275




Compound of Example 102 (0.5 g, 1.12 mmol), di-tert-butyldicarbonate (0.73 g, 3.37 mmol) and pyridine (0.32 ml, 3.93 mmol) in THF (6 ml) were stirred at RT for 3 days. Water and HCl 3N were added. The mixture was extracted with DCM. The organic layer was dried over MgSO4, filtered and evaporated. The residue was purified by Normal phase on Stability Silica 5 μm 150×30.0 mm, Mobile phase (Gradient from 0% NH4OH, 100% DCM, 0% MeOH to 0.6% NH4OH, 94% DCM, 6% MeOH). The desired fraction was collected and further purified by Reverse phase on X-Terra-C18 10 μm 19×150 mm, Mobile phase (Gradient from 40% NH4HCO3 0.5%, 60% MeOH to 0% NH4HCO3 0.5%, 100% MeOH). The desired fraction was collected and the solvent was evaporated, yielding 24 mg (3.3%) of compound 275. MP=157.7° C. (DSC)
Example 2.18
Preparation of Compound 276




Lithium aluminium hydride 1 M in THF (3.04 mmol) was added dropwise at RT to a suspension of compound 290 (476 mg, 1.01 mmol) in THF (57 ml). The RM was stirred at RT for 5 hours. Ice water (0.20 ml) was added with caution, followed by NaOH 3N (0.20 ml) and water (0.60 ml). The RM was partitioned between DCM/MeOH (90/10) and water.
The aqueous layer was extracted once with DCM/MeOH (90/10). The organic layers were mixed, dried over MgSO4, concentrated and filtered. The residue was purified by Normal phase on Cartridge 15-40 μm 30 g, Mobile phase (0.5% NH4OH, 95% DCM, 5% MeOH). The pure fractions were collected and the solvent was evaporated. The residue (120 mg, yellow solid) was not pure enough and was purified again by reverse phase HPLC. The pure fractions were collected and the solvent was evaporated, yielding 65 mg (14%) of compound 276. MP=222° C. (kofler, degradation not melting).
Example 2.19
Preparation of Compound 277




A mixture of compound 312 (90 mg, 0.18 mmol) and lithium hydroxide monohydrate (23 mg, 0.54 mmol) in THF/H2O (10/1, 6 ml) was stirred at RT for 60 hours. The RM was acidified with HCl 3N and the solution was evaporated to dryness. The solid residue was taken up with ACN/water. The precipitate was filtered off and taken up again with ACN. After stirring for 1 hour, filtration afforded 42 mg of compound 277. MP>260° C.
Example 2.20
Preparation of Compound 278




NaBH4 (24.98 mg, 0.66 mmol) was added portionwise at RT to a suspension of compound 292 (250 mg, 0.55 mmol) in MeOH (6 ml). The RM was stirred at RT for 15 minutes. The RM was quenched with water and the precipitate was filtered off. The solid was dissolved in DCM/MeOH and the organic layer was dried over MgSO4, filtered and evaporated to dryness. The residue was purified by Normal phase on Cartridge 15-40 μm 30 g, Mobile phase (1% NH4OH, 90% DCM, 10% MeOH). The pure fractions were collected and evaporated to dryness. The residue (100 mg) was crystallized from ACN/MeOH. The precipitate was filtered off and further purified by Reverse phase on (X-Bridge-C18 5 μm 30×150 mm, Mobile phase (Gradient from 40% NH4HCO3 0.5%, 60% MeOH to 0% NH4HCO3 0.5%, 100% MeOH). The pure fractions were collected and evaporated to dryness, yielding 60 mg (24%) of compound 278. MP=224° C. (kofler)
Example 2.21
Preparation of Compound 279




Under N2, sodium hydride (67.4 mg, 1.68 mmol) was added portionwise to a solution of compound of Example 102 (500 mg, 1.13 mmol) in N,N-dimethylacetamide (20 ml). The mixture was stirred for 3 hours at RT. Methanesulfonyl chloride (0.105 ml, 1.35 mmol) was added dropwise, and the mixture was stirred at RT for 48 hours. The mixture was poured onto water and the product was extracted with EtOAc. The organic layer was washed with water (twice), brine, dried over MgSO4, filtered and evaporated till dryness. The residue was purified by silica gel chromatography (15-40 μm, 30 g, DCM/MeOH/NH4OH 85/15/1) The pure fractions were collected and evaporated to dryness. The resulting residue was purified by Normal phase on Cartridge 15-40 μm 30 g, Mobile phase (80% DCM, 20% MeOH) to give 54 mg (9%) of compound 279. MP>350° C. (DSC)
Analytical Part in Relation to Compounds 250 to 337
LCMS-Method
General Procedure 1
The LC measurement was performed using a HPLC (Ultra Performance Liquid Chromatography) Acquity (Waters) system comprising a binary pump with degasser, an autosampler, a diode-array detector (DAD) and a column as specified in the respective methods below, the column is hold at a temperature of 40° C. Flow from the column was brought to a MS detector. The MS detector was configured with an electrospray ionization source. The capillary needle voltage was 3 kV and the source temperature was maintained at 130° C. on the Quattro (triple quadrupole mass spectrometer from Waters). Nitrogen was used as the nebulizer gas. Data acquisition was performed with a Waters-Micromass MassLynx-Openlynx data system.
Method 1
In addition to the general procedure 1: Reversed phase HPLC was carried out on a Waters Acquity BEH (bridged ethylsiloxane/silica hybrid) C18 column (1.7 μm, 2.1×100 mm) with a flow rate of 0.35 ml/min. Two mobile phases (mobile phase A: 95% 7 mM ammonium acetate/5% acetonitrile; mobile phase B: 100% acetonitrile) were employed to run a gradient condition from 90% A and 10% B (hold for 0.5 minutes) to 8% A and 92% B in 3.5 minutes, hold for 2 min and back to the initial conditions in 0.5 min, hold for 1.5 minutes. An injection volume of 2 μl was used. Cone voltage was 20 V for positive and negative ionization mode. Mass spectra were acquired by scanning from 100 to 1000 in 0.2 seconds using an interscan delay of 0.1 seconds.
General Procedure 2
The HPLC measurement was performed using an Alliance HT 2795 (Waters) system comprising a quaternary pump with degasser, an autosampler, a diode-array detector (DAD) and a column as specified in the respective methods below, the column is hold at a temperature of 30° C. Flow from the column was split to a MS spectrometer. The MS detector was configured with an electrospray ionization source. The capillary needle voltage was 3 kV and the source temperature was maintained at 100° C. on the LCT (Time of Flight ZsprayTM mass spectrometer from Waters. Nitrogen was used as the nebulizer gas. Data acquisition was performed with a Waters-Micromass MassLynx-Openlynx data system.
Method 2
In addition to the general procedure 2: Reversed phase HPLC was carried out on a Waters Xterra-RP C18 column (3.5 μm, 4.6×100 mm) with a flow rate of 0.8 ml/min. Two mobile phases (mobile phase A: 100% 7 mM ammonium acetate; mobile phase B: 100% acetonitrile) were employed to run a gradient condition from 80% A and 20% B (hold for 0.5 minute) to 90% B in 4.5 minutes, 90% B for 4 minutes and reequilibrated with initial conditions for 3 minutes. An injection volume of 5 μl was used. Cone voltage was 20 V for positive and negative ionization mode. Mass spectra were acquired by scanning from 100 to 1000 in 0.4 seconds using an interscan delay of 0.3 seconds.
The below Table lists compounds prepared by, or in a manner similar to, the above described examples (Ex: according example; Melting point (MP) was determined either by K=Koffler (° C.) or DSC=differential scanning calorimetry (° C.); LCMS data: Rt=retention time in minutes, MH+is the protonated mass and method reflects the method according to which LCMS data were generated).














Comp.


LCMS



No.
Ex.
Compound structure
Data
MP ° C.







250
2.1a1




Rt: 3.09 MH+: 474 Method: 1
>280 (K)


 


251
2.1a2




Rt: 3.77 MH+: 499 Method: 1
  263.18 (DSC)


 


252
2.1b




Rt: 3.11 MH+: 476 Method: 1
  154.10 (DSC)


 


253
2.2a




Rt: 3.37 MH+: 438 Method: 1
  210 (K)


 


165B
2.2b




Rt: 3.09 MH+: 453 Method: 1
  161 (DSC)


 


255
2.3a




Rt: 3.18 MH+: 438 Method: 1
  267 (K)   260.3 (DSC)


 


256
2.3b




—
  250-255 (K)


 


257
2.4




Rt: 3.04 MH+: 471 Method: 1
  146 (K)


 


258
2.5




Rt: 3.49 MH+: 514 Method: 1
  185 (K)


 


259
2.6




Rt: 2.86 MH+: 497 Method: 1
  195 (K)   185.4 (DSC)


 


260
2.7




Rt: 3.15 MH+: 485 Method: 1
  130 (K) 


 


261
2.8




Rt: 2.71 MH+: 434 Method: 1
>260 (K) 


 


262
2.9




Rt: 2.78 MH+: 469 Method: 1
  228 (K) 


 


263
2.10




Rt: 4.85 MH+: 463 Method: 2
  230 (K) 


 


264
2.11a




Rt: 2.66 MH+: 385 Method: 1
  163 (K) 


 


265
2.11b




Rt: 2.55 MH+: 440 Method: 1
>250 (K) 


 


266
2.11c




Rt: 3.34 MH+: 467 Method: 1



 


157B
157B




Rt: 2.58 MH+: 375 Method: 1
  229 (DSC) 


 


158B
158B




Rt: 2.52 MH+: 377 Method: 1
  205 (K)


 


267
2.12c




Rt: 2.36 MH+: 357 Method: 1
  162 (K)


 


268
2.13




Rt: 2.16 MH+: 337 Method: 1
  259 (K)


 


269
2.14a



   .2.84 HCl .2.64 H2O
Rt: 2.65 MH+: 497 Method: 1
  200 (K)


 


270
2.14b




Rt: 2.84 MH+: 541 Method: 1
  204 (K)   179.8 (DSC)


 


271
2.14c




Rt: 2.74 MH+: 524 Method: 1
   80 (K) 


 


272
2.14d




Rt: 3.45 MH+: 631 Method: 1
  145 (K) 


 


273
2.15




Rt: 3.71 MH+: 546 Method: 1
  232 (K)   215.2 (DSC) 


 


274
2.16




Rt: 2.91 MH+: 510 Method: 1
  190.14 (DSC) 


 


275
2.17




Rt: 3.09 MH+: 474 Method: 1
  157.79 (DSC) 


 


276
2.18




Rt: 2088 MH+: 443 Method: 1
  222 (K) 


 


277
2.19



   .1.16 HCl .3.31 H2O
Rt: 2.35 MH+: 472 Method: 1
>260 (K) 


 


278
2.20




Rt: 2.93 MH+: 457 Method: 1
  224 (K) 


 


279
2.21




Rt: 2.49 MH+: 524 Method: 1
>350 (K)


 


280
2.1a




Rt: 2.73 MH+: 359 Method: 1
  145 (K)


 


281
2.1a




Rt: 3.73 MH+: 530 Method: 1
  190.6 (K)


 


282
2.1a





  222 (K)


 


283
2.1a




Rt: 3.15 MH+: 460 Method: 1 
>260 (K)


 


284
2.1a




Rt: 3.86 MH+: 497 Method: 1
  215.47 (K)


 


285
2.1a




Rt: 3.08 MH+: 520 Method: 1
  226.2 (K)


 


286
2.1a




Rt: 3.02 MH+: 462 Method: 1
>260 (K)


 


287
2.1a




Rt: 3.52 MH+: 500 Method: 1
>260 (K)


 


288
2.1a




Rt: 2.94 MH+: 492 Method: 1
>260 (K)


 


289
2.1a




Rt: 3.03 MH+: 471 Method: 1
>260 (K)


 


290
2.1a




Rt: 3.43 MH+: 471 Method: 1
>260 (K)


 


291
2.1a




Rt: 3.22 MH+: 460 Method: 1
  188 (K)


 


292
2.1a




Rt: 3.23 MH+: 455 Method: 1
>260 (K)


 


293
2.1a




Rt: 3.61 MH+: 477 Method: 1
  258 (K)   235.40 (DSC)


 


294
2.1a




Rt: 3.97 MH+: 559 Method: 1
  210 (K) 


 


295
2.1a




Rt: 3.23 MH+: 511 Method: 1
  240 (K) 


 


296
2.1a




Rt: 3.98 MH+: 549 Method: 1
  219.27 (DSC) 


 


297
2.1a




Rt: 3.92 MH+: 515 Method: 1
  252 (K) 


 


298
2.1a




Rt: 4.21 MH+: 511 Method: 1
  250 (K) 


 


299
2.1a




Rt: 3.65 MH+: 506 Method: 1
>250 (K)   267.18 (DSC) 


 


300
B1a




Rt: 3.41 MH+: 480 Method: 1
  116 (K) 


 


301
2.1a




Rt: 3.62 MH+: 481 Method: 1
  212.60 (DSC) 


 


302
2.1a




Rt: 3.33 MH+: 431 Method: 1
  238.63 (DSC) 


 


303
2.1a




Rt: 3.31 MH+: 497 Method: 1
  258.89 (DSC) 


 


304
2.1a




Rt: 3.2 MH+: 443 Method: 1
  224 (DSC) 


 


305
2.1a




Rt: 3.25 MH+: 464 Method: 1
  256.73 (DSC)


 


306
2.1a




Rt: 3.77 MH+: 495 Method: 1
  254.03 (DSC)


 


307
2.1a




Rt: 3.69 MH+: 539 Method: 1
>250 (K)   248.89 (DSC)


 


308
2.1a




Rt: 3.15 MH+: 470 Method: 1
  219 (K) 


 


309
2.1a




Rt: 3.51 MH+: 447 Method: 1
  210 (DSC) 


 


310
2.1a




-Rt: 3.53 MH+: 520 Method: 1
  249.94 (DSC) 


 


311
2.2a




Rt: 3.25 MH+: 464 Method: 1
  235.4 (K) 


 


312
2.2a




Rt: 2.68 MH+: 443 Method: 1
—


 


313
2.2a




Rt: 2.9 MH+: 457 Method: 1
  171.6 (DSC) 


 


314
2.2a




Rt: 3.72 MH+: 546 Method: 1
  192 (K) 


 


315
2.2a




Rt: 3.33 MH+: 518 Method: 1
  201 (K) 


 


316
2.2a




Rt: 2.74 MH+: 488 Method: 1
—


 


317
2.2a




Rt: 3.13 MH+: 524 Method: 1
  290 (DSC) 


 


317
2.2a




—
—


 


318
2.3a




—
  213 (K) 


 


319
2.4




Rt: 3.01 MH+: 477 Method: 1
  198 (K) 


 


320
2.4




Rt: 3.37 MH+: 469 Method: 1
  207 (K) 


 


321
2.4




Rt: 3.34 MH+: 469 Method: 1
  230 (K) 


 


322
2.4




Rt: 3.51 MH+: 496 Method: 1
  193 (K) 


 


323
2.4




Rt: 3.52 MH+: 470 Method: 1
  162 (K)


 


324
2.4




Rt: 3.04 MH+: 472 Method: 1
>250 (K)


 


325
2.9




Rt: 2.79 MH+: 469 Method: 1
>260 (K)


 


326
2.11a




Rt: 3.02 MH+: 453 Method: 1
  228-230 (K)


 


327
2.11a




Rt: 3.06 MH+: 457 Method: 1
  214 (DSC)


 


328
2.12b




Rt: 2.16 MH+: 335 Method: 1
  237 (DSC)


 


329
2.12c




Rt: 2.69 MH+: 397 Method: 1
  222 (K)


 


330
2.14c




Rt: 2.71 MH+: 510 Method: 1
  164 (K)


 


331
1.15




Rt: 3.91 MH+: 560 Method: 1
  200 (K)   188.14 (DSC)


 


332
2.18




Rt: 2.71 MH+: 458 Method: 1
  235 (K) 


 


333
2.19




Rt: 2.35 MH+: 457 Method: 1
  222 (K) 


 


334
2.21




Rt: 2.63 MH+: 553 Method: 1
  179 (K) 


 


335
2.4




Rt: 2.94 MH+: 472 Method: 1
>250 (K) 


 


336
2.2b





  226-228 (K) 


 


337
159B













Biological Assays
FGFR3 and PDGFR In Vitro Kinase Inhibitory Activity Assays
Enzymes (from Upstate) were prepared at 2× final concentration in 1× kinase assay buffer (Table 1). Enzymes were then incubated with test compounds, biotinylated Flt3 substrate (biotin −DNEYFYV) (Cell Signalling Technology Inc.) and ATP. The reaction was allowed to proceed for 3 hours (FGFR3) or 2.5 hrs (PDGFR-beta) at room temperature on a plate shaker at 900 rpm before being stopped with 20 μl of 35 mM EDTA, pH 8 (FGFR3) or 55 mM EDTA, pH 8 (PDGFR-beta). Twenty pl of 5× detection mix (50 mM HEPES pH 7.5, 0.1% BSA, 2 nM Eu-anti-pY (PY20) (PerkinElmer) 15 nM SA-XL665 (Cisbio) for FGFR3 and 50 mM HEPES, pH 7.5, 0.5 M KF, 0.1% BSA, 11.34 nM Eu-anti-pY (PT66) (PerkinElmer), 94 nM SA-XL665 (Cisbio) for PDGFR-beta) was then added to each well and the plate sealed and incubated at room temperature for one hour on a plate shaker at 900 rpm. The plate was then read on a Packard Fusion plate reader in TRF mode.







TABLE 1







Final assay conditions for FGFR3 and PDGFR assay













1 x Assay
Flt3 substrate
ATP



Enzyme
Buffer
concentration
concentration







FGFR3
A
0.125 μM
 8 μM



PDGFR-beta
B
 0.15 μM
30 μM










Kinase Assay buffers were:
A: 50 mM HEPES pH 7.5, 6 mM MnCl2, 1 mM DTT, 0.1% TritonX-100
B: 20 mM MOPS pH 7.0, 10 mM MnCl2, 0.01% Triton X-100, 1 mM DTT, 0.1 mM Sodium orthovanadate
Examples 1-125 have IC50 values less than 10 μM against FGFR3 or provide at least 50% inhibition of the FGFR3 activity at a concentration of 10 μM. Examples 1-116 and 118-125 have IC50 values less than 1 μM against FGFR3 or provide at least 50% inhibition of the FGFR3 activity at a concentration of 1 μM.
Preferred compounds of the invention (for example Examples 1-24, 26-76, 78-83, 85-114, 118 and 120-125) have IC50 values of less than 0.1 μM against FGFR3 or provide at least 50% inhibition of the FGFR3 activity at a concentration of 0.1 μM in the FGFR3 assay.
FGFR3Data for the compounds of the invention in the above assays are provided in Table A3.
VEGFR2 In Vitro Kinase Inhibitory Activity Assay
Assay reactions containing VEGFR2 enzyme (purchased from Upstate), and 250 μM Poly (Glu,Tyr) 4:1 substrate (CisBio) in 50 mM HEPES, pH 7.5, 6 mM MnCl2, 1 mM DTT, 0.01% TritonX-100, 5 μM ATP (2.8 Ci/mmol) were set up in the presence of compound. Reactions were stopped after 15 minutes by adding an excess of phosphoric acid. The reaction mixture was then transferred to a Millipore MAPH filter plate where the peptide binds and the unused ATP is washed away. After washing, scintillant was added and the incorporated activity measured by scintillation counting on a Packard Topcount.
VEGFR2 in vitro Kinase Inhibitory Activity Assays
VEGFR2 (from Upstate), prepared at 2× final concentration, was incubated with test compounds, biotinylated Flt3 substrate (biotin-VASSDNEYFYVDF) (Cell Signalling Technology Inc.) and ATP in the appropriate assay buffer (Table 1). The reaction was allowed to proceed for 1 hour at room temperature on a plate shaker at 700 rpm before being stopped with 35 mM EDTA, pH 8 (VEGFR2). 5× detection mix (50 mM HEPES, pH 7.5, 0.1% BSA, 11.34 nM Eu-anti-pY (PY20), 187.5 nM SA-XL665) was then added to each well and the plate sealed and incubated at room temperature for one hour on a plate shaker at 700 rpm. The plate was then read on a Packard Fusion plate reader or a BMG Pherastar both in TRF mode.







TABLE 2







Final assay conditions for VEGFR2 assay













1 x Assay
Flt3 substrate
ATP



Enzyme
Buffer
concentration
concentration







VEGFR2
B
0.5 μM
0.5 μM










Kinase Assay buffers were:
B: 50 mM HEPES pH 7.5, 6 mM MnCl2, 1 mM DTT, 0.01% TritonX-100, 0.1 mM Sodium orthovanadate
VEGFR2Data for the compounds of the invention in the above assay are provided in Table A3.
FGFR1, FGFR2, FGFR4, VEGFR1 and VEGFR3 In Vitro Kinase Inhibitory Activity Assays
The inhibitory activity against FGFR1, FGFR2, FGFR4, VEGFR1 and VEGFR3 can be determined at Upstate Discovery Ltd. Enzymes were prepared at 10× final concentration in enzyme buffer (20 mM MOPS, pH 7.0, 1 mM EDTA, 0.1% B-mercaptoethanol, 0.01% Brij-35, 5% glycerol, 1 mg/ml BSA). Enzymes were then incubated in assay buffer with various substrates and 33P-ATP (−500 cpm/μmol) as described in the table. The reaction was initiated by the addition of Mg/ATP. The reaction was allowed to proceed for 40 minutes at room temperature before being stopped with 5 μl of a 3% phosphoric acid solution. Ten μl of the reaction mix was transferred to either a filtermatA or P30 filtermat and washed three times in 75 mM phosphoric acid and once in methanol before being dried for scintillation counting.
Compounds were tested at the concentrations of the assay reagents as detailed below in duplicate against all kinases and the percent activity compared to control was calculated. Where inhibition was high an IC50 was determined.
















ATP



Assay

Concentration


Enzyme
Buffer
Substrate
(μM)







FGFR1
A
250 μM KKKSPGEYVNIEFG
200 μM


FGFR2
B
0.1 mg/ml poly(Glu, Tyr) 4:1
 90 μM


FGFR4
C
0.1 mg/ml poly(Glu, Tyr) 4:1
155 μM


VEGFR1
A
250 μM KKKSPGEYVNIEFG
200 μM


VEGFR3
A
500 μM GGEEEEYFELVKKKK
200 μM









Enzyme buffer A: 8 mM MOPS, pH 7.0, 0.2 mM EDTA, 10 mM MgAcetate
Enzyme buffer B: 8 mM MOPS, pH 7.0, 0.2 mM EDTA, 2.5 mM MnCl2, 10 mM MgAcetate
Enzyme buffer C: 8 mM Mops, pH 7.0, 0.2 mM EDTA, 10 mM MnCl2, 10 mM MgAcetate.
Cell-Based PERK ELISA Method
LP-1 or JIM-1 multiple myeloma cells were seeded in 96 well plates at 1×106 cells/ml in 200u1 per well in serum free media. HUVEC cells were seeded at 2.5×105 cells /ml and allowed to recover for 24 h prior to transfer to serum free media. Cells were incubated for 16 h at 37° C. prior to the addition of a test compound for 30 minutes. Test compounds were administered at a 0.1% final DMSO concentration. Following this 30 minute incubation a FGF-1/Heparin (FGF-1 at 100 ng/mlfinal and Heparin at 100 ug/ml) mixture or VEGF165 (100 ug/ml) was added to each of the wells for a further 5 minutes. The media was removed and 50u1 ERK ELISA lysis buffer (R and D Systems DuoSet ELISA for pERK and Total ERK #DYC-1940E, DYC-1018E) added. ELISA plates and standards were prepared according to the standard DuoSet protocols and the relative amounts of pERK to total ERK in each sample calculated according to the standard curve.
Data for the compounds of the invention in the above assay are provided in Table A3.
In particular, compounds of the invention were tested against the LP-1 cell line (DSMZ no.: ACC 41) derived from human multiple myeloma. Many compounds of the invention (eg. Examples 1-24, 26-38, 40-53, 56, 58-70, 72-76, 78-83, 85-87, 89-102, 114 and 116) were found to have IC50 values of less than 20 μM in this assay and some compounds (for example Examples 1-19, 21-24, 26-38, 40-53, 56, 58-64, 66-70, 72-76, 78-83, 85-87, 89-94, 96-102 and 114) have IC50 values of less than 1 μM or provide at least 50% inhibition at a concentration of 1 μM.
HUVEC Cell Based Selectivity Assays
HUVEC cells were seeded in 6 well plates at 1×106 cells/well and allowed to recover for 24 h. They were transferred to serum free media for 16 hours prior to treatment with test compound for 30 minutes in 0.1% DMSO final. Following compound incubation FGF-1 (100 ng/ml) and Heparin (100 ug/ml) or VEGF165 (100 ng/ml) were added for 5 minutes. Media was removed, cells washed with ice-cold PBS and lysed in 100 ul TG lysis buffer (20 mM Tris, 130 nM NaCl, 1% Triton-X-100, 10% Glycerol, protease and phosphatase inhibitors, pH 7.5). Samples containing equivalent amounts of protein were made up with LDS sample buffer and run on SDS PAGE followed by western blotting for a number of downstream VEGFR and FGFR pathway targets including phospho-FGFR3, phospho-VEGFR2 and phospho-ERK1/2. The western blot can then be analysed by visual inspection or densitometry.
In vivo Models of Hypertension
A number of animal models exist to measure the potential hypertensive effects of small molecule inhibitors. They can be classified into two main types; indirect and direct measurements. The most common indirect method is the cuff technique. Such methods have the advantages of being non-invasive and as such can be applied to a larger group of experimental animals however the process allows only intermittent sampling of blood pressure and requires the animal to be restrained in some way. Application of restraint can stress the animal and means that changes in blood pressure attributable to a specific drug effect can be hard to pick up.
Direct methodologies include those that make use of radio telemetry technology or via indwelling catheters connected to externally mounted transducers. Such methods require a high level of technical expertise for the initial surgery involved in implantation and costs involved are high. However a key advantage is that they allow continuous monitoring of blood pressure without restraint over the time period of the experiment. These methods are reviewed in Kurz et al (2005), Hypertension. 45, 299-310.
hERG Activity
The activity of compound of formula (I) against the hERG K+ion channel can be determined using the assay described in the article by M. H. Bridgland-Taylor et al., Journal of Pharmacological and Toxicological Methods, 54 (2006), 189-199. This IonWorksTM HT hERG screening assay is performed commercially by Upstate (Millipore) using the PrecisIONTM hERG-CHO cell line.
Determination of Potency against Cytochrome P450
The potency of the compound of formula (I) against cytochrome P450 (CYP450) enzymes 1A2, 2C9, 2C19, 3A4 and 2D6 can be determined using the Pan Vera Vivid CYP450 screening kits available from Invitrogen (Paisley, UK). The CYP450s are supplied in the form of baculosomes containing the CYP450 and NADPH reductase and the substrates used are the fluorescent Vivid substrates. The final reaction mixtures are as follows:
1A2
100 mM potassium phosphate, pH 8, 1% acetonitrile, 2 μM 1A2 Blue vivid substrate, 100 μM NADP+, 4 nM CYP450 1A2, 2.66 mM glucose-6-phosphate, 0.32 U/ml glucose-6-phosphate dehydrogenase.
2C9
50 mM potassium phosphate, pH 8, 1% acetonitrile, 2 μM Green vivid substrate, 100 μM NADP+, 8 nM CYP450 2C9, 2.66 mM glucose-6-phosphate, 0.32 U/ml glucose-6-phosphate dehydrogenase.
2C19
50 mM potassium phosphate, pH 8, 1% acetonitrile, 8 μM Blue vivid substrate, 100 μM NADP+, 4 nM CYP450 2C19, 2.66 mM glucose-6-phosphate, 0.32 U/ml glucose-6-phosphate dehydrogenase.
3A4
100 mM potassium phosphate, pH 8, 1% acetonitrile, 10 μM 3A4 Blue vivid substrate, 100 μM NADP+, 2.5 nM CYP450 3A4, 2.66 mM glucose-6-phosphate, 0.32 U/ml glucose-6-phosphate dehydrogenase.
2D6
100 mM potassium phosphate, pH 8, 1% acetonitrile, 5 μM 2D6 Blue vivid substrate, 100 μM NADP+, 16 nM CYP450 2D6, 2.66 mM glucose-6-phosphate, 0.32 U/ml glucose-6-phosphate dehydrogenase.
Fluorescence is monitored for 20 minutes at 30 second intervals on a Molecular Devices Gemini fluorescence plate reader. The excitation and emission wavelengths are 390 nm and 460 nm for 1A2, 2C19 and 3A4, 390 nm and 485 nm for 2D6 and 485 nm and 530 nm for 2C9. Initial rates are determined from progress curves.
The test compound is made up in methanol or acetonitirile and tested against the CYP450s at a concentration of 10 μM.
The preferred compounds of formula (I) have an IC50 greater than 10 μM against 1A2, 2C9, 2C19, 3A4 and 2D6.
Ba/F3-TEL-FGFR3 & Ba/F3 (WT) cell proliferation assays Stably transfected Ba/F3-TEL-FGFR3 cells were plated out into black 96-well tissue culture plates with clear bottoms in RPMI medium containing 10% FBS and 0.25 mg/ml G418 at a density of 5×103 cells/well (200 μl per well). The parental wild-type Ba/F3 cells (DSMZ no.: ACC 300) were plated out into black 96-well tissue culture plates with clear bottoms in RPMI medium containing 10% FBS and 2 ng/ml mouse IL-3 (R&D Systems) at a density of 2.5×103 cells/well (200 μl per well). Plates were placed in an incubator overnight before adding the compounds the following day. Dilutions of compounds were made in DMSO starting at 10 mM and were diluted into the wells to give a final DMSO concentration of 0.1% in assay. Compounds were left on the cells for 72 hours before the plates were removed from the incubator and 20 μl of Alamar BlueTM (Biosource) was added to each well. Plates were placed in the incubator for 4-6 hours before reading plates at 535 nm (excitation)/590 nm (emission) on a Fusion plate reader (Packard). Where inhibition is high an IC50 can be determined.
Data for the compounds of the invention in the above assay are provided in Table A3.
In particular, compounds of the invention were tested against the Ba/F3-TEL-FGFR3 cell line. Many compounds of the invention (eg. Examples 1-4, 6-10, 12-19, 21-24, 26, 28-38, 40-47, 49-53, 56, 58-80, 84-87, 89-94, 96-104, 106-108, 110-111, 113-114, 118-120, 122 and 124-125) were found to have IC50 values of less than 20 μM in this assay and some compounds (for example Examples 1-4, 6-10, 12-19, 21-24, 26, 28-30, 32-34, 36-38, 40-42, 44-45, 47, 49-53, 56, 58-67, 69-76, 78-80, 85-87, 89-93, 96-104, 106-108, 110-111, 113-114, 118-120, 122 and 124) have IC50 values of less than 1 μM or provide at least 50% inhibition at a concentration of 1 μM. Many compounds are more active against Ba/F3-TEL-FGFR3 cell line than the parental wild-type Ba/F3 cell line, for example over 5-fold, in particular 10 fold more active against Ba/F3-TEL-FGFR3 cell line than the parental wild-type Ba/F3 cell line.












TABLE A3






FGFR3
VEGFR2

BaF3-TEL-




IC50(μM)*
IC50(μM)*
BaF3 WT
FGFR3
LP-1 pERK


Eg
or % I
or % I
prolif (μM)
prolif (μM)
ELISA (μM)




















114
0.0135
0.427
0.65
0.5
0.047


115
0.295
8.45


 0% at 10 μM


 1
0.000830
0.0451
0.92
0.087
0.0074


 2
0.000850
0.0410
12% at 10 μM
0.23
  62% at 0.003 μM


 3
0.00120
0.0370
0.16
0.095
0.0088


 4
0.000570
0.0106
51% at 10 μM
0.8
0.077


 5
0.00115
0.0669
 0% at 10 μM
 0% at 10 μM
45% at 1 μM 


 6
0.000545
0.0134
0.87
0.062
0.0092


 7
0.000550
0.0200
0.86
0.095
0.0063


 8
0.00110
0.0249
0.45
0.24
0.012


116
0.225
1.34


1.9


 9
0.00400
0.0812
6.40
0.797
0.14


 10
50% at 0.001 μM
0.0390
2.3
0.3
0.047


 11
0.0104
0.220


0.032


 12
0.00110
0.0133
3.7
0.24
0.041


 13B
0.00446
0.113
44% at 10 μM
0.48
0.031


 14
0.0110
0.195
1.4
0.29
0.1


 15
0.000640
0.0115
2.6
0.25
0.011


 16
0.0242
0.950
0.83
0.23
0.11


 17
0.00396
0.0650
0.056
0.047
0.044


 18
0.0133
0.198
1.4
0.19
0.095


 19
0.0247
0.349
0.55
0.57
0.13


 20
0.00736
0.110


1.1


 21
0.00629
0.0804
 0% at 10 μM
38% at 10 μM
0.41


 22
0.000704
0.00785
1.1
0.048
0.0044


 23
58% at 0.001 μM
0.00945
 0% at 10 μM
0.42
0.63


 24
0.00800
0.0893
2.20% at 10 μM  
0.63
0.57


 25
0.545
5.09


 26
0.0169
0.480
0.77
0.31
0.27


 27
0.0130
0.270


0.52


 28
0.0218
0.139
35% at 10 μM
0.92
0.17


 29
0.0167
0.269
3.1
0.77
0.12


 30
0.00926
0.145
0.13
0.062
0.045


 31
0.0800
2.60
 0% at 10 μM
2.6
0.82


 32
0.000613
0.0112
0.67
0.012
0.014


 33
0.00350
0.0510
0.32
0.14
0.057


 34
0.00305
0.0599
 0% at 10 μM
0.12
0.013


 35
0.0375
0.757
 0% at 10 μM
1.4
0.33


 36
0.000820
0.00906
 0% at 10 μM
0.38
0.065


 37
0.000807
0.0126
3.3% at 10 μM 
0.73
0.29


 38
0.000610
0.0130
0.44
0.022
0.0086


 39
0.00130
0.0475


 40
0.000612
0.0106
4
0.24
0.046


 41
0.00105
0.0160
2.8
0.072
0.025


 42
0.0270
0.593
1.1
0.41
0.27


 43
0.0103
0.285
 0% at 10 μM
2.7
0.35


 44
0.000582
0.0110
0.9
0.045
0.022


 45
0.000603
0.0103
 0% at 10 μM
0.58
0.35


 46
0.0384
1.20
27% at 10 μM
1.2
0.18


 47
0.000542
0.0155
0.68
0.021
0.0098


 48
0.0220
>30.0
 0% at 10 μM
 0% at 10 μM
0.13


 49
0.00225
0.0944
0.29
0.085
0.017


 50
 39% at 0.0003 μM

0.71
0.029
0.021


 51
0.00174
0.0315
10% at 10 μM
0.04
0.015


 52
0.00245
0.0370
51% at 10 μM
0.91
0.33


 53
0.000675
0.00785
4.1
0.028
0.023


 54
0.00125
0.0182


 55
 38% at 0.0003 μM
0.0180


 56
0.00460
0.230
4.6
0.16
0.021


 57
0.0341
0.351


40% at 3 μM 


 58
0.0150
0.420
0.7
0.25
0.077


 59
0.0235
0.628
5.1
0.41
0.1


 60
0.0145
0.350
 0% at 10 μM
0.27
0.087


 61
0.00412
0.0775
15% at 10 μM
0.053
0.064


 62
0.00370
0.0339
1.1
0.089
0.11


 63
50.5% at 0.0003 μM 
0.00800
1.4
0.092
0.05


 64
0.00495
0.125
2.5
0.13
0.049


 65
0.00774
0.110
8.3% at 10 μM 
0.83
1.3


 66
 43% at 0.0003 μM
0.0130
1.9
0.046
0.069


 67
0.000569
0.0143
2.1
0.69
0.84


 68
0.00280
0.0390
36% at 10 μM
1.5
0.53


 69
0.00125
0.0508
4.6
0.26
0.096


 70
0.000740
0.0208
2.7
0.15
0.027


 71
0.00110
0.0550
1.5
0.16


 72
0.00145
0.0475
32% at 10 μM
0.76
0.3


 73
60% at 0.001 μM
0.0270
3.7
0.13
0.12


 74
51.5% at 0.0003 μM 
0.0130
0.82
0.096
0.018


 75
0.000535
0.00890
32% at 10 μM
0.03
0.63


117
1.15
1.50


 76
0.000730
0.0130
26% at 10 μM
0.49
0.51


 77
0.100
2.70
53% at 10 μM
4.3


 78
0.00279
0.0589
0.15
0.11
0.017


 79
0.00375
0.0734
0.4
0.16
0.035


 80
0.000890
0.0177
 0% at 10 μM
0.08
0.039


 81
0.000447
0.0149
20% at 3 μM 
0.14
0.028


 82
0.000715
0.0125


0.0067


 83
0.00154
0.0325


0.012


 84
0.0789
1.64
1.4
1


 85
0.00489
0.118
0.17
0.16
0.065


 86
0.00628
0.150
1.9
0.32
0.04


 87
0.0130
0.230
0.41
0.26
0.072


 88
0.00787
0.130
 0% at 10 μM
0.4% at 10 μM 
16% at 10 μM


 89
0.00830
0.190
0.097
0.085
0.073


 90
0.0124
0.235
0.76
0.44
0.092


 91
0.000840
0.0269
0.1
0.072
0.0079


 92
0.000940
0.0290
0.53
0.26
0.11


 93
0.00904
0.240
0.043
0.033
0.065


 94
0.00475
0.0834
5.8
3.1
0.95


 95
0.000530
0.0120
 0% at 10 μM
21% at 10 μM
3.4


 96
0.00175
0.0504)
1.7
0.19
0.0063


 97
0.00130
0.0869
0.44
0.11
0.0081


 98
0.00255
0.0583
0.7
0.22
0.02


 99
0.00419
0.180
0.32
0.24
0.063


100
0.0140
0.329
0.97
0.47
0.09


101
0.00280
0.0790
0.16
0.064
0.055


102
0.00482
0.268
2.3
0.0283
0.0939


103
0.00370
0.130
0.078
0.057


104
0.0228
0.270
0.4
0.21


118
0.0135
0.330
0.88
0.19


105
0.00620
0.180
16% at 10 μM
2.7% at 10 μM 


106
0.00139
0.0214
0.41
0.033


107
0.00268
0.0324
0.89
0.1


108
0.00130
0.0490
46% at 10 μM
0.095
1.2


109
0.0185
0.398
32
0.67


110
0.00635
0.313
43% at 10 μM
0.25
0.0917


111
0.000890
0.0315
0.180
0.027
0.016


112
49% at 0.3 μM 


113
0.000610
0.00779
1.4
0.01
0.016


119
0.0927
1.38
23% at 3 μM 
0.55


120
0.0130
0.383
1.1
0.3


121
0.0862
0.847


122
0.000704
0.0185
2.4
0.041


123
0.00120
0.0134
8.90
1.61


124
0.000789
0.0191
0.27
0.047
0.024


125
0.0657
1.01
2.1
1.3


146
0.0917
51% at 1 μM
1.2% at 10 μM 
 0% at 10 μM


142
0.0171
0.455
1.1
0.25


126
0.00268
0.0384
3.7% at 10 μM 
1
0.98


152
0.000930
0.0153
10% at 10 μM
0.54
3.3


130
0.00230
0.0394
26% at 10 μM
1.5


150
0.0440
0.581
1.7
0.77


136
0.0600
0.465
0.44
0.47


135
0.00355
0.189
0.51
0.21


139
0.0349
0.980
3.6
1.9


145
0.000560
0.0135
0.82
0.077


144
0.00240
0.0353
3.6
0.19
0.13


131
0.00166
0.0247
2.9% at 10 μM 
0.78


160
0.0503
49.5% at 1 μM  


132
0.000710
0.0159
22.9% at 10 μM  
0.0936
0.172


140
0.0345
0.455
7.1% at 10 μM 
 0% at 10 μM


133
0.000484
0.00973
34% at 3 μM; 
0.099
0.0714





31% at 10 μM


149
0.00288
0.157


141
0.0179
0.448
0.042
0.043
0.11


161
0.00248
0.0973
0.15
0.077
0.01


162
0.0228
59% at 1 μM
37% at 3 μM 
0.403
0.091


264
0.0288
0.319
25% at 10 μM
0.63
0.31


336
0.00944
0.453
0.46
0.13
0.074


280
0.0973
1.38
74% at 3 μM 
0.62
0.35


163
0.0294
0.680
38% at 3 μM; 
1.45
0.22





11% at 10 μM


164
0.0190
0.588
4.2
0.95
0.26


329
0.0480
0.298
31% at 10 μM
11% at 10 μM
0.23


165A/B
0.00305
56.5% at 0.3 μM
 8% at 10 μM
0.17
0.042


166
0.0349
0.574
 0% at 10 μM
3.7
0.29


167
0.00576
0.235
 0% at 10 μM
56% at 3 μM 
60% at 10 μM


137
0.00420
0.114
23% at 10 μM
0.12
0.034


168
0.00697
0.332
 0% at 10 μM
0.39
0.43


328
0.0265
0.686
34% at 3 μM 
3


159
0.210
2.18


337
0.0353
0.706
23% at 10 μM
1
1.5


268
0.00489
0.0740
23.5% at 3 μM  
0.278
1.83


319
0.000643
0.0239
0.15
0.019
0.012


265
4.10
>30.0


327
0.00820
0.199
30% at 10 μM
0.25
0.31


169
0.0151
0.520


170
0.0598
1.11
14% at 3 μM 
0.82


148
0.00345
0.131


171
0.00920
0.340
16% at 1.0 μM 
0.26


172
0.00375
0.0630
3.4
0.068


173
0.00393
0.354
29.5% at 3 μM; 
0.249
0.052





22% at 10 μM


250
0.00460
38.7% at 0.3 μM
1.73
0.27
0.075


174
0.0133
0.449
1.5
0.79
0.49


138
0.00786
0.260
36% at 3 μM 
0.17
0.038


175
0.00583
0.419
10
0.45
0.077


176
0.0230
0.391
59% at 10 μM
0.6
0.33


154
0.00228
0.0431
5.6
0.38
0.086


177
0.0440
>1.00
16% at 10 μM
46% at 10 μM
47% at 10 μM


267
0.00965
0.0954
55% at 10 μM
0.35


158
0.0430
0.173
2.9
0.31


178
0.00391
0.480
4.52
0.036
0.018


179
0.0920
>10.0
22% at 1 μM 
15% at 1 μM 


180
0.0260
1.20
42% at 10 μM
0.67


181
0.0115
0.351
0.49
0.14
0.046


182
0.0555
0.647
10
0.46
2.5


183
0.00420
0.150
0.29
0.075
0.028


184
0.00950
0.240
22% at 10 μM
44% at 10 μM


263
0.00100
0.0190
21% at 1 μM 
0.074


311
0.0340
   20% at 0.978 μM
 2% at 3 μM;
1.2





32% at 10 μM


157
0.230
0.700
38% at 10 μM
1.6


185
0.00756
0.171
0% at 3 μM
0.55
0.14


269
0.0120
0.260
0% at 3 μM
2.6


326
0.0420
   45% at 0.978 μM
18% at 10 μM
2.1


281
42% at 0.1 μM 
>100 > 10.0
1.4


186
0.00218
0.0954
0.32
0.073
0.019


187
0.00670
0.200
1.8
0.16


188
0.00590
0.180
0.43
0.16
0.09


189
0.0110
0.260
3.4
0.63


190
0.0820
3.80
35% at 3 μM 
0% at 3 μM


282
0.00480
0.133
2.8
0.15


266
0.00866
0.403
1.4
0.3


191
0.520
>30.0
18% at 1 μM 
4.3


192
0.380 > 0.300
>3.00
49% at 3 μM 
2.4


320
0.00180
0.0450
0.71
0.086


193
0.0161
  36% at 0.89 μM;
1.5
0.68




  48% at 3.11 μM


194
0.00650
0.640
26% at 3 μM 
1.4


195
 66% at 0.00097 μM
0.0370
5
0.076


282
0.00720
0.120
23% at 10 μM
0.24


283
>1.00
>10.0


155
0.00460
0.0550
28% at 3 μM 
0.41


197
0.0240
0.240
2.6
44% at 1 μM 


198

0.270
39% at 3 μM 
0.27


199
0.00928
0.170
62% at 10 μM
0.23


200
0.0180
0.570


201
0.0240
0.820


325
0.00370
0.130


262
0.00440
0.150
20% at 10 μM
50% at 3 μM 


284
0.200
 62% at 10 μM
14% at 3 μM 
2.9





3.40


285
0.150
51% at 3 μM
12% at 1 μM 
2.6





10% at 10 μM


318
0.00420
0.170
0.42
0.084


202
46% at 0.001 μM
0.0250
21% at 1 μM 
0.26


203
0.0240
0.520
30% at 10 μM
0.89


253
0.0120
0.830
1.8
0.41


204
0.000990
0.0270
0.82
0.025


205
0.00130
0.0590
9.8
0.087


206
0.00770
0.170
2.9
0.25


313
0.0240
0.820
18% at 10 μM
36% at 10 μM


312
0.00520
0.340
 3% at 10 μM
1.3


255
0.00165
0.0500
 0% at 10 μM
0.062


207
0.00110
0.0320
14% at 10 μM
0.25


208
0.00150
0.0420
21% at 10 μM
0.11


209
0.0110
0.300
 0% at 10 μM
15% at 10 μM


210
0.00350
  42% at 0.1 μM
13% at 3 μM 
77% at 3 μM 


212
0.0130
>0.300
10% at 3 μM 
25% at 3 μM 


213
0.000460
0.0120
22% at 10 μM
0.16


214
0.0170
0.280
2.6
0.46


215
39% at 0.1 μM 
>10.0
10
8.8


314
0.0300
62% at 3 μM
21% at 10 μM
0.42


315
0.0170
0.640
35% at 10 μM
0.42


216
0.00320
0.0280
28% at 10 μM
0.1


217
0.0180
1.00
37% at 3 μM 
0.39


218
0.00100
0.0220
30% at 10 μM
0.38


219
0.00210
0.110
3.5
0.095


271
59% at 0.001 μM
0.0100
0.12
0.063


273
0.0260
40% at 1 μM
43% at 10 μM
0.69


331
42% at 0.03 μM 
43% at 3 μM
60% at 10 μM
1.6


220
0.00300
0.150
1.5
0.2


270
0.00910
0.670
16% at 3 μM 
0.92


261
0.000540
0.0140
 0% at 10 μM
0.16


221
0.0130
0.310
21% at 3 μM 
0.33


222
0.0190
0.560
2.3
0.81


223
0.0110
  39% at 0.3 μM
45% at 3 μM 
0.35


224
61% at 0.001 μM
0.0150
16% at 3 μM 
0.033


225
0.00120
0.0140
 0% at 10 μM
0.27


226
0.00280
0.0830
40% at 10 μM
0.2


316
0.00420
0.330
 0% at 10 μM
1.7


286
 57% at 0.0003 μM
0.00850
 0% at 10 μM
55% at 3 μM 


321
 36% at 0.0003 μM
0.0170
0.46
0.021


287
0.00460
0.610
0.99
0.18


227
0.00340
0.240
3.6
0.085


228
0.0170
0.110
5.1
0.27


229
67% at 0.03 μM 
  59% at 0.3 μM
5.5
0.32


230
49% at 0.003 μM
0.140
0.16
0.09


288
 54% at 0.0003 μM
0.00930
7.80% at 10 μM  
0.035


322
0.0190
0.930
1.2
0.29


277
0.00260
0.340
 0% at 10 μM
 0% at 10 μM


231
0.0440
0.790
23% at 10 μM
0.61


232
45% at 0.001 μM
0.0630
0.6
0.045


272
 51% at 0.00097 μM
0.0350
0.2
0.051


330
 66% at 0.00097 μM
0.00500
0.56
0.027


332
0.00540
0.400
 0% at 10 μM
1.6


233
0.0750
  62% at 3.1 μM
0.0149
0.0108


234
0.00250
0.0930
6.4
0.11


235
0.000880
0.140
1.2
0.071


236
46% at 0.31 μM 
6.40


237
0.0110
0.160
0.12
0.079


238
0.0130
  40% at 0.31 μM
41% at 10 μM
0.2


279
0.0140
2.10
 7% at 10 μM
15% at 10 μM


291
0.0160
  57% at 0.98 μM
24% at 1 μM 
0.24


289
0.000990
  48% at 0.03 μM
30% at 1 μM 
1.2


250
0.000500
0.0140
25% at 3 μM 
0.028


290
0.00850
0.260
16% at 1 μM 
0.61


239
0.0230
49% at 1 μM
26% at 3 μM 
0.57


240
0.0480
0.340
17% at 10 μM
0.56


241
0.00610
0.220
4.20% at 10 μM  
0.15


242
0.000830
0.0140
1.7
0.0097


243
0.410
5.64


244
0.0166
0.683
17% at 3 μM 
0.95


245
0.00740
  43% at 0.3 μM
2.2
0.3


246
0.00430
  45% at 0.3 μM
1
0.084


335
0.0830
5.50
20% at 10 μM
24% at 10 μM


323
0.0110
0.590
0% at 1 μM
29% at 1 μM 


260
0.00200
0.140
0% at 1 μM
0.049


333
0.00810
0.360
0% at 1 μM
0% at 1 μM


247
0.000960
0.0120
36% at 1 μM 
0.015


252
0.0360
>1.00
0% at 1 μM
54% at 1 μM 


275


276
0.00940
0.240
0% at 1 μM
74% at 1 μM 


278
0.00380
0.130
0% at 1 μM
0.18


258
0.0583
37% at 1 μM
36% at 3 μM 
0.95


335
0.000990
0.0620
0.74
0.039


257
0.00280
0.100
3.9
0.11


292
0.00520
0.150
38% at 10 μM
0.13


293
0.00370
0.180
36% at 3 μM 
0.13


259
0.00224
0.140
2.6
0.034


296
0.270
1.30


295
0.0780
0.440
30% at 10 μM
36% at 3 μM 


298
0.0930
0.956
3
0.86


297
0.0210
0.270
5.5
0.19


299
0.0170
0.0920
17% at 1 μM 
0.15


324
0.00560
0.340
9.40% at 10 μM  
0.099


300
0.00550
0.280
 0% at 10 μM
0.13


301
0.110
1.30
2.81
1.24


251
0.00510
0.140
 0% at 10 μM
0.089


302
0.00440
0.150
 0% at 10 μM
0.095


303
0.0550
0.600
 0% at 10 μM
 0% at 10 μM


294
0.0390
0.500
22% at 3 μM 
0.9


304
55% at 0.1 μM 
59% at 3 μM


305
0.00130
0.170
 6% at 10 μM
0.14


307
39% at 0.03 μM 
58% at 1 μM
 0% at 10 μM
25% at 10 μM


306
0.0390
60% at 1 μM
 0% at 10 μM
0.37


317
53% at 3 μM   
 56% at 10 μM


308
0.00220
0.120
 0% at 10 μM
0.14


309
0.00820
0.210
2.3
0.32


310
36% at 0.3 μM 
>3.00


274
0.150
55% at 1 μM


249
57.3% at 1 μM   
>30.0





*where compounds have been tested multiple times, values quoted in the table represent the geometric mean of the values obtained

## Claims

1. A compound of formula (I):



wherein
R2 represents C1-6 alkyl or halo C1-6 alkyl;
A is a group Ad which represents a phenyl group which may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
R3 represents hydrogen or C1-6 alkyl;
R4 is a group R4c;
R4c is selected from any one of (a)-(f), which represent:
(a) pyridazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Re groups, or two or more (e.g. 2, 3 or 4) Rb groups;
(b) pyrazinyl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(c) triazinyl optionally substituted by one or two Rb groups;
(d) pyrimidin-2-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rb groups;
(e) pyrimidin-4-yl optionally substituted by one or more (e.g. 1, 2 or 3) Rg groups or two or more (e.g. 2, 3 or 4) Rb groups;
(f) pyrimidin-5-yl optionally substituted by one or more (e.g. 1, 2 or 3) RP groups or two or more (e.g. 2, 3 or 4) Rb groups;
Rw, Rx, Ry and Rz independently represent hydrogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C1-6 alkanol, —COOC1-6 alkyl, hydroxy, C1-6 alkoxy, haloC1-6 alkyl, —(CH2)n—O—C1-6 alkyl, —CO—-(CH2)n—C1-6 alkoxy, C1-6 alkylamino, —C1-6 alkyl-N(C1-6 alkyl)2, —C1-6 alkyl-NH(C1-6 alkyl), C3-8 cycloalkyl or C3-8 cycloalkenyl or when attached to a nitrogen atom, Rw, Rx, Ry and Rz may form a ring;
Ra represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy,—(CH2)s—NRxCO2Ry,—O—(CH2)2—NRxRy,—O—(CH2)s—CRxRy—(CH2)t—ORzor —(CH2)s—SO2NRxRygroups;
Rb represents an Ra group or a -Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Y represents a bond, —CO—(CH2)s—, —(CRxRy)s—CO—, —COO—,—(CH2)n —(CRxRy)s—, —NRx—(CH2)s—, —(CH2)s—NRx—, —CONRx—, —NRxCO—, —SO2NRx—, —NRxSO2—, —NRxCONRy—, —NRxCSNRy—, —O—(CH2)s—, —(CH2)s—O—, —S—, —SO— or —(CH2)s—SO2—;
Re represents halogen, C2-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy, —(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rg represents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O —(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NHC1-6 alkyl, —(CH2)s—N(C1-6 alkyl)2, —(CH2)n—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH-SO2—NRxRy, —OCONRxRy,—(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRy groups, or a —Y-heterocyclyl group wherein said heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
Rprepresents halogen, C1-6 alkyl, C2-6 alkenyl, C2-6 alkynyl, C3-8 cycloalkyl, C3-8 cycloalkenyl, —ORx, —(CH2)n—O—C1-6 alkyl, —O—(CH2)n—ORx, haloC1-6 alkyl, haloC1-6 alkoxy, C1-6 alkanol, ═O, ═S, nitro, Si(Rx)4, —(CH2)s—CN, —S—Rx, —SO—Rx, —SO2—Rx, —CORx, —(CRxRy)s—COORz, —(CRxRy)s—CONRwRz, —(CH2)s—CONRxRy, —(CH2)s—NRxRy, —(CH2)s—NRxCORy, —(CH2)s—NRxSO2—Ry, —(CH2)s—NH—SO2—NRxRy, —OCONRxRy,—(CH2)s—NRxCO2Ry, —O—(CH2)s—CRxRy—(CH2)t—ORz or —(CH2)s—SO2NRxRygroups; a —Y-(4-membered heterocyclyl group) wherein said 4-membered heterocyclyl group is substituted by one or more (e.g. 1, 2 or 3) Ra groups; or a —Y-(5-10 membered heterocyclyl group) wherein said 5-10 membered heterocyclyl group may be optionally substituted by one or more (e.g. 1, 2 or 3) Ra groups;
n represents an integer from 1-4;
s and t independently represent an integer from 0-4;
including a pharmaceutically acceptable salt, solvate or tautomer thereof.

2. A compound as defined in claim 1 wherein Ad represents unsubstituted phenyl.

3. A compound as defined in claim 1 wherein R2 represents haloC1-6 alkyl.

4. A compound as defined in claim 1 wherein R2 represents ethyl or —CH2—CF3.

5. A compound as defined in claim 4 wherein R2 represents —CH2—CF3.

6. A compound as defined in claim 1 wherein R3 represents hydrogen or methyl.

7. A compound as defined in claim 6 wherein R3 represents hydrogen.

8. A compound as defined in claim 1 wherein R4 is a group R4c and R4c is selected from (d) and (e).

9. A compound as defined in claim 1 which is a compound of formula (Ia)




wherein R3 and R4 are as defined in claim 1.

10. A process for the preparation of a compound of formula (I) as defined in claim 1, which process comprises:
(i) the reaction of a compound of the formula (XX):





or a protected form thereof, wherein A, R3 and R4 are as defined in claim 1, with an appropriately substituted isocyanate or an appropriately substituted amine in the presence of carbonyl diimidazole (CDI) and thereafter removing any protecting group present; or
(ii) the reaction of a compound of the formula (XX):





or a protected form thereof, wherein A, R3 and R4 are as defined in claim 1, with p-nitrophenyl chloroformate and an appropriately substituted amine and thereafter removing any protecting group present; or (iii) reacting a compound of formula (V) and (VI):



wherein R1 is hydrogen, and R2, R3 and R4 are as defined in claim 1;
and optionally thereafter converting one compound of the formula (I) into another compound of the formula (I).

11. A pharmaceutical composition comprising a compound of formula (I) as defined in claim 1.

12. A method of inhibiting FGFR kinase, which method comprises contacting the kinase with a compound of the formula (I) as defined in claim 1.

13. A method for the treatment of a disease or condition selected from multiple myeloma, bladder carcinoma hepatocellular carcinoma oral squamous cell carcinoma, cervical carcinoma, and urothelial carcinoma, which method comprises administering to a subject in need thereof a compound of the formula (I) as defined in claim 1.

14. A compound as defined in claim 1 wherein the compound is selected from:




including a pharmaceutically acceptable salt, solvate or tautomer thereof.

15. A compound according to claim 14, wherein the compound is 1-(2,2,2-Trifluoro-ethyl)-3-{3-[7-(4-trifluoromethyl-pyrimidin-2-yl)-imidazo [1,2-a]pyridin-3-yl]-phenyl}-urea hydrochloride.

16. A compound according to claim 14, wherein the compound is 1-{3-[7-(Pyrimidin-2-yl)-imidazo [1,2-a]pyridin-3-yl]-phenyl}-3-(2,2,2-trifluoro-ethyl)-urea hydrochloride.

17. A compound according to claim 14, wherein the compound is 1-{3-[7-(4-Amino-5-trifluoromethyl-pyrimidin-2-yl)-imidazo-[1,2-a]pyridin-3 -yl]-phenyl}1 -3-(2,2,2-trifluoroethyl)-urea hydrochloride.

18. A compound according to claim 14, wherein the compound is 1-(2,2,2-Trifluoro-ethyl)-3-{3-[7-(6-trifluoromethyl-pyrimidin-4-yl)-imidazo[1,2-a]pyridin-3-yl]-phenyl}-urea hydrochloride.

19. A pharmaceutical composition according to claim 11 wherein the compound of formula (I) is selected from:




including a pharmaceutically acceptable salt, solvate or tautomer thereof.

20. A compound according to claim 1, wherein the compound is in the form of a free base or salt.

21. A compound according to claim 14, wherein the compound is in the form of a free base or salt.