EX-10.1



 Exhibit 10.1 

WAIVER 
 This Waiver (this
“Waiver”) is entered into as of May 23, 2016, by and between Great Basin Scientific, Inc., a Delaware corporation (the “Company”), and the undersigned holder (the “Holder”) which is one of the
investors listed on the Schedule of Buyers (“Schedule of Buyers”) attached to that certain Securities Purchase Agreement between the Company and all of the investors listed on the Schedule of Buyers (the
“Buyers”) dated December 28, 2015 (the “SPA”) with reference to the following facts: 
 A. On December 28,
2015, the Company and the Buyers (as defined in the Registration Rights Agreement) entered into the SPA in relation to the issuance and sale by the Company and purchase by the Holders of: (i) that aggregate principal amount of senior secured
convertible notes of the Company, in substantially the form attached to the SPA as Exhibit A (the “Notes”), set forth opposite such Buyer’s name in column (3) on the Schedule of Buyers (which aggregate principal amount
of Notes for all Buyers was $22,100,000) and (ii) related Series D Warrants, in substantially the form attached to the SPA as Exhibit B (the “Warrants”), representing the right to acquire that number of shares of common stock
of the Company, par value $0.0001 (“Common Stock”), set forth opposite such Buyer’s name in column (4) on the Schedule of Buyers (as exercised, collectively, the “Warrant Shares”), which totaled in the
aggregate 3,503,116 Warrant Shares. 
 B. The issuance of the Notes and the Warrants occurred at a closing on December 30, 2015 (the
“Closing Date”). 
 C. In accordance with the terms of Section 4(n)(ii) of the SPA, the Company agreed that until the later
of (I) the date that is ninety (90) days after the date the Company obtains the Stockholder Approval (as defined in the SPA) and (II) the earlier of (x) the time of the registration of all of the Registrable Securities (as defined in
the SPA) pursuant to and in accordance with the Registration Rights Agreement by and between the Company and each of the Buyers (the “Registration Rights Agreement”) entered into December 30, 2015, which registration remains in
effect or (y) such time as all of the Registrable Securities, if a registration statement is not available for the resale of all of the Registrable Securities, may be sold without restriction or limitation pursuant to Rule 144 and without the
requirement to be in compliance with Rule 144(c)(1), the Company shall not, directly or indirectly, file any registration statement with the SEC, or file any amendment or supplement thereto, or grant any registration rights to any Person that can be
exercised prior to the earlier of such time as set forth in such Section 4(n)(ii) (the “Lock-up”).. 
 D. On May 13, 2016,
the Company filed a Registration Statement on Form S-1 (333-211334) (the “Offering Registration Statement”) related to a proposed offering of units of the Company anticipated to consist of a unit comprised of one share of common
stock of the Company and one Series G Warrant to purchase one share of common stock for gross aggregate proceeds from the offering of approximately $6,000,000, with each Series G Warrant anticipated to be exercisable at a price equal to the per unit
price of the Subsequent Offering for a period of five years (“Subsequent Offering”), and the Company anticipates filing an amendment to the Offering Registration Statement and conducting the Subsequent Offering during the calendar
week starting May 23, 2016. 







 E. The Company desires to obtain a waiver of: (i) the Company’s failure to comply with the
provisions of Section 4(n)(ii) of the SPA and (ii) the Event of Default (as defined in the Notes) arising under Section 4(a)(x) of the Notes due to the Company’s failure to comply with the provisions of Section 4(n)(ii) of the SPA prior to the
date hereof, in each case, solely with respect to the filing of the Offering Registration Statement. 
 F. In compliance with Section 9(e) of
the SPA and Section 19 of the Notes , this Waiver shall only be effective upon the execution and delivery of this Waiver and waivers in form and substance identical to this Waiver (the “Other Waivers”) by other holders of
Registrable Securities (as defined in the SPA) (each an “Other Holder”) representing on the Closing Date at least fifty-one percent (51%) of the aggregate number of Registrable Securities issued or issuable under the Cash Notes and
Cash Warrants issued on the Closing Date and shall include Hudson Bay so long as Hudson Bay and/or any of its affiliates collectively hold at least five percent (5%) of the Registrable Securities, in the aggregate (the “Required
Holders”) (such time, the “Effective Time”). 
 NOW, THEREFORE, in consideration of the premises set forth above,
and other good and valuable consideration, the receipt and sufficiency of which are hereby acknowledged, the parties hereto hereby agree as follows: 

1. Waiver. The Holder hereby waives, effective as of the Effective Time: (i) the breach by the Company of Section 4(n)(ii) of the SPA
solely with respect to (x) the Company’s filing of the Offering Registration Statement, (y) the Company’s filing of an amendment to the Offering Registration Statement in the calendar week starting on May 23, 2016 and (z) the
Company’s consummation of the Subsequent Offering as set forth in the Offering Registration Statement, as amended by the amendment described in the immediately preceding clause (y), and (ii) the Event of Default arising under Section 4(a)(x) of
the Notes due to the Company’s failure to comply with Section 4(n)(ii) of the SPA as described in the immediately preceding clause (i). 

2. Acknowledgments. The Company hereby confirms and agrees that (i) except with respect to the waivers set forth in Section 1 above
that are effective as of the Effective Time, the SPA and Notes shall continue to be, in full force and effect; (ii) the execution, delivery and effectiveness of this Waiver shall not operate as an amendment of any right, power or remedy of the
Holder except to the extent expressly set forth herein. 
 3. Fees And Expenses. [NTD: HB ONLY: The Company shall reimburse the
Holder for its legal fees and expenses in connection with the preparation and negotiation of this Waiver and transactions contemplated thereby, by paying any such amount to Schulte Roth & Zabel LLP (the “Holder Counsel Expense”)
by wire transfer of immediately available funds in accordance with the written instructions of Schulte Roth & Zabel LLP delivered to the Company. The Holder Counsel Expense shall be paid by the Company whether or not the transactions
contemplated by this Waiver are consummated. Except as otherwise set forth above, each party to this Waiver shall bear its own expenses in connection with the transactions contemplated hereby.] [NTD: ALL OTHERS: Each party to this Waiver shall
bear its own expenses in connection with the transactions contemplated hereby.]. 

  
 - 2 - 








 4. No Material, Nonpublic Information. The Company hereby agrees and acknowledges
that the transactions contemplated by this Waiver do not constitute material, nonpublic information of the Company or any of its Subsidiaries, and that from and after the filing with the SEC of Amendment No. 1 to the Offering Registration Statement,
the Company represents to the Holder that it shall have publicly disclosed all material, non-public information delivered to the Holder by the Company or any of its Subsidiaries, or any of their respective officers, directors, employees or agents on
or prior to the date hereof and that the Holder shall not be in possession of any material, nonpublic information received from the Company, any of its Subsidiaries or any of their respective officers, directors, employees, affiliates or agents,
that is not disclosed in Amendment No. 1 to the Offering Registration Statement. In addition, effective upon the filing of Amendment No. 1 to the Offering Registration Statement, the Company acknowledges and agrees that any and all
confidentiality or similar obligations under any agreement, whether written or oral, between the Company, any of its Subsidiaries or any of their respective officers, directors, affiliates, employees or agents on the one hand, and the Holder or any
of its affiliates on the other hand, shall terminate. The Company shall not, and shall cause each of its Subsidiaries and its and each of their respective officers, directors, affiliates, employees and agents, not to, provide any Holder with any
material, nonpublic information regarding the Company or any of its Subsidiaries from and after the date hereof without the express prior written consent of the Holder. To the extent that the Company, any of its Subsidiaries or any of their
respective officers, directors, affiliates employees or agents delivers any material, non-public information to any Holder without the Holder’s consent, the Company hereby covenants and agrees that the Holder shall not have any duty of
confidentiality to the Company, any of its Subsidiaries or any of their respective officers, directors, affiliates, employees or agents with respect to, or a duty to the Company, any of its Subsidiaries or any of their respective officers,
directors, affiliates, employees or agents not to trade on the basis of, such material, non-public information. The Company understands and confirms that the Holder will rely on the foregoing representations in effecting transactions in securities
of the Company. 
 5. Independent Nature of Holder Obligations and Rights. The obligations of the Holder under this Waiver are
several and not joint with the obligations of any Other Holder, and the Holder shall not be responsible in any way for the performance of the obligations of any Other Holder under any Other Waiver. Nothing contained herein or in any Other
Waiver, and no action taken by the Holder pursuant hereto, shall be deemed to constitute the Holder and Other Holders as a partnership, an association, a joint venture or any other kind of entity, or create a presumption that the Holder and Other
Holders are in any way acting in concert or as a group with respect to such obligations or the transactions contemplated by this Waiver or any Other Waiver and the Company acknowledges that the Holders are not acting in concert or as a group with
respect to such obligations or the transactions contemplated by this Waiver or any Other Waiver. The Company and the Holder confirm that the Holder has independently participated in the negotiation of the transactions contemplated hereby
with the advice of its own counsel and advisors. The Holder shall be entitled to independently protect and enforce its rights, including, without limitation, the rights arising out of this Waiver or, any Other Waiver, and it shall not be
necessary for any Other Holder to be joined as an additional party in any proceeding for such purpose. 

  
 - 3 - 








 6. No Third Party Beneficiaries. This Waiver is intended for the benefit of the
parties hereto and their respective permitted successors and assigns, and is not for the benefit of, nor may any provision hereof be enforced by, any other Person. 

7. Counterparts. This Waiver may be executed in any number of counterparts and by different parties hereto in separate
counterparts, each of which when so executed and delivered shall be deemed to be an original and all of which taken together shall constitute but one and the same instrument. In the event that any signature is delivered by facsimile
transmission or by an e-mail which contains a portable document format (.pdf) file of an executed signature page, such signature page shall create a valid and binding obligation of the party executing (or on whose behalf such signature is executed)
with the same force and effect as if such signature page were an original thereof. 
 8. No Strict Construction. The language
used in this Waiver will be deemed to be the language chosen by the parties to express their mutual intent, and no rules of strict construction will be applied against any party. 

9. Headings. The headings of this Waiver are for convenience of reference and shall not form part of, or affect the interpretation
of, this Waiver. 
 10. Severability. If any provision of this Waiver is prohibited by law or otherwise determined to be invalid
or unenforceable by a court of competent jurisdiction, the provision that would otherwise be prohibited, invalid or unenforceable shall be deemed amended to apply to the broadest extent that it would be valid and enforceable, and the invalidity or
unenforceability of such provision shall not affect the validity of the remaining provisions of this Waiver so long as this Waiver as so modified continues to express, without material change, the original intentions of the parties as to the subject
matter hereof and the prohibited nature, invalidity or unenforceability of the provision(s) in question does not substantially impair the respective expectations or reciprocal obligations of the parties or the practical realization of the benefits
that would otherwise be conferred upon the parties. The parties will endeavor in good faith negotiations to replace the prohibited, invalid or unenforceable provision(s) with a valid provision(s), the effect of which comes as close as possible
to that of the prohibited, invalid or unenforceable provision(s). 
 11. Amendments. No provision of this Waiver may be amended
other than by an instrument in writing signed by the Company and the Required Holders. 
 12. Further Assurances. Each party
shall do and perform, or cause to be done and performed, all such further acts and things, and shall execute and deliver all such other agreements, certificates, instruments and documents, as the other party may reasonably request in order to carry
out the intent and accomplish the purposes of this Waiver and the consummation of the transactions contemplated hereby. 
 13.
Notice. Whenever notice is required to be given under this Waiver, unless otherwise provided herein, such notice shall be given in accordance with Section 9(f) of the SPA. 

14. Successors and Assigns. This Waiver shall be binding upon and inure to the benefit of the parties and their respective
successors and assigns. 

  
 - 4 - 








 15. Capitalized Terms. Capitalized terms used herein and not otherwise defined herein
shall have the respective meaning set forth in the Registration Rights Agreement. 
 16. Governing Law; Jurisdiction; Jury
Trial. All questions concerning the construction, validity, enforcement and interpretation of this Waiver shall be governed by the internal laws of the State of New York, without giving effect to any choice of law or conflict of law
provision or rule (whether of the State of New York or any other jurisdictions) that would cause the application of the laws of any jurisdictions other than the State of New York. Each party hereby irrevocably submits to the exclusive
jurisdiction of the state and federal courts sitting in The City of New York, Borough of Manhattan, for the adjudication of any dispute hereunder or in connection herewith or with any transaction contemplated hereby or discussed herein, and hereby
irrevocably waives, and agrees not to assert in any suit, action or proceeding, any claim that it is not personally subject to the jurisdiction of any such court, that such suit, action or proceeding is brought in an inconvenient forum or that the
venue of such suit, action or proceeding is improper. Each party hereby irrevocably waives personal service of process and consents to process being served in any such suit, action or proceeding by mailing a copy thereof to such party at the
address for such notices to it under this Waiver and agrees that such service shall constitute good and sufficient service of process and notice thereof. Nothing contained herein shall be deemed to limit in any way any right to serve process in
any manner permitted by law. EACH PARTY HEREBY IRREVOCABLY WAIVES ANY RIGHT IT MAY HAVE, AND AGREES NOT TO REQUEST, A JURY TRIAL FOR THE ADJUDICATION OF ANY DISPUTE HEREUNDER OR IN CONNECTION WITH OR ARISING OUT OF THIS WAIVER OR ANY
TRANSACTION CONTEMPLATED HEREBY. 
 [Signature Pages Follow] 

  
 - 5 - 








 IN WITNESS WHEREOF, each Undersigned and the Company have caused their respective signature page to this
Waiver to be duly executed as of the date first written above. 
  

					
	COMPANY:
	
	GREAT BASIN SCIENTIFIC, INC.
		
	By:	 	  

		 	Name:	 	Ryan Ashton
		 	Title:	 	President, CEO


 [Signature Page to Waiver] 







 IN WITNESS WHEREOF, each Undersigned and the Company have caused their respective signature page to this
Waiver to be duly executed as of the date first written above. 
  

					
	HOLDER:
			
		 	 By:
	 	
		 		 	  

		 		 	 Name:

		 		 	 Title:

			
		 		 	
		 		 	  



 [Signature Page to Waiver]