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 Characterization and Interventions for Foodborne Pathogens: Wyndmoor, PA
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ARS Home Northeast Area Wyndmoor, Pennsylvania Eastern Regional Research Center Characterization and Interventions for Foodborne Pathogens People & Locations







Siddhartha  Kanrar

                                                                (PhD)
                        Characterization and Interventions for Foodborne Pathogens

                        




                        
                        Computational Biologist
                        Phone: (215) 233-6732
                        
                        
                        Fax: (215) 233-6581(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)
                            ProjectsDetection, Quantification and Characterization Technologies for Foodborne Pathogens
                                                    In-House Appropriated
                                                                    (D)Accession Number: 440529Molecular Analysis of Foodborne Pathogen Responses to Stressors
                                                    In-House Appropriated
                                                                    (D)Accession Number: 441489**Publications**
                                                (Clicking on the reprint icon
                                                    Reprint Icon
                                                    will take you to the publication reprint.)Comparative genomics of extra intestinal pathogenic E. coli from human clinical and food samples

- (Abstract Only)Detection of Escherichia coli O157:H7 in ground beef using long-read sequencing
                                                        

- (Peer Reviewed Journal)Counihan, K.L., Kanrar, S., Tilman, S.M., Capobianco Jr, J.A., Armstrong, C.M., Gehring, A.G. 2024. Detection of Escherichia coli O157:H7 in ground beef using long-read sequencing. Foods. (13)6:828. https://doi.org/10.3390/foods13060828.Whole genome sequences, de novo assembly, and annotation of antibiotic resistant Campylobacter jejuni strains S27, S33, and S36 newly isolated from chicken meat
                                                        

- (Peer Reviewed Journal)He, Y., Kanrar, S., Reed, S., Lee, J., Capobianco Jr, J.A. 2024. Whole genome sequences, de novo assembly, and annotation of Campylobacter jejuni strains S27, S33, and S36 newly isolated from chicken meat. Microorganisms. 12(1):159. https://doi.org/10.3390/microorganisms12010159.Whole genome sequencing and characterization of Escherichia coli human isolate DP033
                                                        

- (Peer Reviewed Journal)Liu, Y., Kanrar, S., Elder, J., Ream, A.R., Huang, L., Gehring, A.G., Uhlich, G.A., Clabots, C., Johnson, J.R. 2023. Whole genome sequencing and characterization of Escherichia coli human isolate DP033. Microbiology Resource Announcements. Available online: January 2024 13 Issue 1. https://doi.org/10.1128/mra.00792-23.Complete closed genome sequences of multidrug resistant uropathogenic Escherichia coli
                                                        

- (Peer Reviewed Journal)Guragain, M., Kanrar, S., Bagi, L.K., Chen, C. 2023. Complete closed genome sequences of multidrug resistant uropathogenic Escherichia coli. Microbiology Resource Announcements. 12:10. https://doi.org/10.1128/MRA.00422-23.Genome sequences of a stress resistant outbreak-associated Shiga Toxin-Producing Escherichia coli O157:H7 strain and a variant with enhanced congo red-binding capability
                                                        

- (Peer Reviewed Journal)Chen, C., Kanrar, S., Paoli, G. 2022. Genome sequences of a stress resistant outbreak-associated Shiga Toxin-Producing Escherichia coli O157:H7 strain and a variant with enhanced congo red-binding capability. Microbiology Resource Announcements. 12(1). https://doi.org/10.1128/mra.00974-22.Complete genomic sequences of Campylobacter coli strains isolated from poultry sold in Pennsylvania farmers’ markets
                                                        

- (Peer Reviewed Journal)Gunther, N.W., Kanrar, S., Uhlich, G.A. 2021. Complete genomic sequences of Campylobacter coli strains isolated from poultry sold in Pennsylvania farmers’ markets. Microbiology Resource Announcements. Available online: Microbiol Resource Announcements 10:e00015-21. https://doi.org/10.1128/MRA.00015-21.Complete genome sequence of Escherichia coli strain FEX669, a ColV plasmid-containing isolate from retail chicken meat
                                                        

- (Peer Reviewed Journal)Elders, J., Liu, Y., Kanrar, S., Gehring, A.G., Sommers, C.H., Johnston, B.D., Johnson, J.R. 2021. Complete genome sequence of Escherichia coli strain FEX669, a ColV plasmid-containing isolate from retail chicken meat. Microbiology Resource Announcements. 10(8):e01340. https://doi.org/10.1128/MRA.01340-20.Escherichia coli serotype O157:H7 PA20R2R complete genome sequence
                                                        

- (Peer Reviewed Journal)Uhlich, G.A., Paoli, G., Kanrar, S. 2020. Escherichia coli serotype O157:H7 PA20R2R complete genome sequence. Microbiology Resource Announcements. 9(50): e01143-20. https://doi.org/10.1128/MRA.01143-20.


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