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ARS Home Plains Area Clay Center, Nebraska U.S. Meat Animal Research Center Livestock Bio-Systems People & Locations







Jeremy R Miles
                        Livestock Bio-Systems

                        




                        
                        Research Physiologist (Animals)
                        Phone: (402) 762-4182
                        
                        
                        Fax: (402) 762-4382(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)
                            ProjectsImproving Lifetime Productivity in Swine using Systems Biology and Precision Management Approaches
                                                    In-House Appropriated
                                                                    (D)Accession Number: 442712Assessing the Utility of Geophones to Determine Animal Activity in Swine Farrowing Pens for Precision Management Monitoring - Stanford University
                                                    Non-Funded Cooperative Agreement
                                                                    (N)Accession Number: 439413Influence of Maternal- and Embryonic- Derived Extracellular Vesicles on the Initiation of Porcine Conceptus Elongation.
                                                    Reimbursable Cooperative Agreement
                                                                    (R)Accession Number: 441290**Publications**
                                                (Clicking on the reprint icon
                                                    Reprint Icon
                                                    will take you to the publication reprint.)The influence of choline and follistatin supplementation during in-vitro bovine oocyte maturation on oocyte maturation and blastocyst development

- (Peer Reviewed Journal)Transcriptomic analysis of luteal tissue supports the delayed timing of luteolysis in heifers with greater ovarian reserve

- (Abstract Only)Early- and mid-lactation milk traits are associated with piglet growth during lactation
                                                        

- (Peer Reviewed Journal)Rempel, L.A., Oliver, W.T., Miles, J.R. 2023. Early- and mid-lactation milk traits are associated with piglet growth during lactation. Journal of Animal Science. 101. Article skad340. https://doi.org/10.1093/jas/skad340.Maternal amino acid supplementation from pre-breeding through early gestation alters fetal muscle development

- (Other)Hauxwell, K.M., Cushman, R.A., Caton, J.S., Ward, A.K., Lindholm-Perry, A.K., Snider, A.P., Freetly, H.C., Dahlen, C.R., Amat, S., Neville, B.W., Thorson, J.F., Oliver, W.T., Miles, J.R., Crouse, M.S. 2023. Maternal amino acid supplementation from pre-breeding through early gestation alters fetal muscle development. North Dakota Livestock Research Report. 18-21. Available: https://www.ndsu.edu/agriculture/extension/publications/2023-north-dakota-livestock-research-reportEvaluation of uterine capacity during late gestation in young commercial females over the past twenty years
                                                        

- (Abstract Only)Miles, J.R., Rempel, L.A. 2023. Evaluation of uterine capacity during late gestation in young commercial females over the past twenty years. Reproduction, Fertility and Development. 36(2).Article 178. https://doi.org/10.1071/RDv36n2Ab54.Embryo transfer medium supplemented with bovine plasminogen increases zona pellucida diameter and decreases thickness

- (Abstract Only)PigSense: Structural vibration-based activity and health monitoring system for pigs
                                                        

- (Peer Reviewed Journal)Dong, Y., Bonde, A., Codling, J.R., Bannis, A., Cao, J., Macon, A., Rohrer, G., Miles, J., Sharma, S., Brown-Brandl, T., Sangpetch, A., Sangpetch, O., Zhang, P., Noh, H. 2023. PigSense: Structural vibration-based activity and health monitoring system for pigs. ACM Transactions on Sensor Networks. 20(1):1-43. https://doi.org/10.1145/3604806.Characterization of mRNA expression for key glycerophospholipid and sphingolipid enzymes within trophectoderm and embryonic disc during initiation of porcine conceptus elongation
                                                        

- (Abstract Only)Miles, J.R., Rempel, L.A., Snider, A.P., Pannier, A.K. 2023. Characterization of mRNA expression for key glycerophospholipid and sphingolipid enzymes within trophectoderm and embryonic disc during initiation of porcine conceptus elongation [abstract]. Molecular Reproduction and Development. 90(7):736. https://doi.org/10.1002/mrd.23697.Combination of 1.8 Mm choline and follistatin supplementation may reduce transcript abundance of CEPT1 and CPBE4 during in-vitro bovine oocyte maturation
                                                        

- (Abstract Only)Snider, A.P., Rempel, L.A., Cushman, R., Miles, J.R. 2023. Combination of 1.8 Mm choline and follistatin supplementation may reduce transcript abundance of CEPT1 and CPBE4 during in-vitro bovine oocyte maturation. Journal of Animal Science. 101(Supplement 3):591-592. https://doi.org/10.1093/jas/skad281.689.Influence of dietary methionine and guanidinoacetic acid on estrous cycles and early pregnancy in beef heifers
                                                        

- (Abstract Only)Cushman, R., Hauxwell, K., Snider, A.P., Freetly, H., Oliver, W.T., Amat, S., Neville, B.W., Thorson, J., Lindholm-Perry, A., Miles, J.R., Dahlen, C.R., Ward, A., Perry, G.A., Caton, J.S., Crouse, M.S. 2023. Influence of dietary methionine and guanidinoacetic acid on estrous cycles and early pregnancy in beef heifers. Journal of Animal Science. 101(Supplement 3):580-581. https://doi.org/10.1093/jas/skad281.678.Methionine and guanidinoacetic acid supplementation throughout the periconceptual period of gestation alters metabolite concentrations and fetal development
                                                        

- (Abstract Only)Hauxwell, K.M., Cushman, R.A., Caton, J.S., Ward, A.K., Lindholm-Perry, A.K., Snider, A.P., Freetly, H.C., Dahlen, C.R., Amat, S., Oliver, W.T., Miles, J.R., Crouse, M.S. 2023. Methionine and guanidinoacetic acid supplementation throughout the periconceptual period of gestation alters metabolite concentrations and fetal development. Journal of Animal Science. 101(Supplement 3):329-330. https://doi.org/10.1093/jas/skad281.395.Methionine and guanidinoacetic acid supplementation during the periconceptual period of gestation shifts methionine metabolism of fetal bull calves at d 63 of gestation
                                                        

- (Abstract Only)Crouse, M.S., Hauxwell, K., Caton, J.S., Ward, A., Dahlen, C.R., Amat, S., Freetly, H.C., Lindholm-Perry, A., Neville, B.W., Oliver, W.T., Thorson, J., Snider, A.P., Miles, J.R., Cushman, R.A. 2023. Methionine and guanidinoacetic acid supplementation during the periconceptual period of gestation shifts methionine metabolism of fetal bull calves at d 63 of gestation. Journal of Animal Science. 101(Supplement 3):172. https://doi.org/10.1093/jas/skad281.208.Is scrotal ultrasound a useful tool in ram breeding soundness examination?
                                                        

- (Abstract Only)Murphy, T.W., Freking, B.A., Wildeus, S., Miles, J.R., Cushman, R., Snider, A.P., Rempel, L.A. 2023. Is scrotal ultrasound a useful tool in ram breeding soundness examination? Journal of Animal Science. 101(Supplement 3):654. https://doi.org/10.1093/jas/skad281.761.Secreted metabolome of porcine blastocysts encapsulated within in vitro 3D alginate hydrogel culture systems undergoing morphological changes provides insights into specific mechanisms involved in the initiation of porcine...
                                                        

- (Peer Reviewed Journal)Walsh, S.C., Miles, J.R., Broeckling, C.D., Rempel, L.A., Wright-Johnson, E.C., Pannier, A.K. 2023. Secreted metabolome of porcine blastocysts encapsulated within in vitro 3D alginate hydrogel culture systems undergoing morphological changes provides insights into specific mechanisms involved in the initiation of porcine conceptus elongation. Journal of Reproduction, Fertility and Development. 35(5):375-394. https://doi.org/10.1071/RD22210.Polymorphism of the follicle stimulating hormone receptor does not impact reproductive performance or in-vitro embryo production in beef heifers
                                                        

- (Peer Reviewed Journal)Snider, A.P., Yake, H.K., Granger, C.D., Rosasco, S.L., McDaneld, T.G., Snelling, W.M., Chase Jr., C.C., Miles, J.R., Lents, C.A., Quail, L.K., Rich, J.J., Epperson, K.M., Crouse, M.S., Summers, A.F., Perry, G.A., Bennett, G.L., Cushman, R.A. 2023. Polymorphism of the follicle stimulating hormone receptor does not impact reproductive performance or in-vitro embryo production in beef heifers. Theriogenology. 195:131-137. https://doi.org/10.1016/j.theriogenology.2022.10.025.Polymorphism of the follicle stimulating hormone receptor does not impact reproductive performance or in-vitro embryo production in beef heifers

- (Abstract Only)Mechanisms regulating the initiation of porcine conceptus elongation

- (Review Article)Mechanisms regulating the initiation of porcine conceptus elongation
                                                        

- (Review Article)Miles, J.R., Walsh, S.C., Rempel, L.A., Pannier, A.K. 2022. Mechanisms regulating the initiation of porcine conceptus elongation. Molecular Reproduction and Development. Article 23623. https://doi.org/10.1002/mrd.23623.Sperm characteristics of maternal composite rams before and after the breeding season

- (Abstract Only)Snider, A.P., Freking, B.A., Miles, J.R., Rempel, L.A., Crouse, M.S., Cushman, R.A., Wildeus, S., Murphy Jr, T.W. 2022. Sperm characteristics of maternal composite rams before and after the breeding season [abstract]. Society for the Study of Reproduction Annual Meeting, July 26-29, 2022, Spokane, Washington. Poster P233.Greater numbers of antral follicles in the ovary are associated with increased concentrations of glucose in uterine luminal fluid of beef heifers
                                                        

- (Peer Reviewed Journal)Snider, A.P., Crouse, M.S., Rosasco, S.L., Epperson, K.M., Northrop-Albrecht, E.J., Rich, J.J., Chase, C.C. Jr., Miles, J.R., Perry, G.A., Summers, A.F., Cushman, R.A. 2022. Greater numbers of antral follicles in the ovary are associated with increased concentrations of glucose in uterine luminal fluid of beef heifers. Animal Reproduction Science. 239. Article 106968. https://doi.org/10.1016/j.anireprosci.2022.106968.Sow posture and feeding activity monitoring in a farrowing pen using ground vibration

- (Proceedings)Global analysis of differential gene expression within the porcine conceptus transcriptome as it transitions through spherical, ovoid, and tubular morphologies during the initiation of elongation
                                                        

- (Peer Reviewed Journal)Walsh, S.C., Miles, J.R., Keel, B.N., Rempel, L.A., Wright-Johnson, E.C., Lindholm-Perry, A.K., Oliver, W.T., Pannier, A.K. 2022. Global analysis of differential gene expression within the porcine conceptus transcriptome as it transitions through spherical, ovoid, and tubular morphologies during the initiation of elongation. Molecular Reproduction and Development. Article 23553. https://doi.org/10.1002/mrd.23553.Injectable decellularized nucleus pulposus tissue maintains neuroinhibitory properties

- (Peer Reviewed Journal)Characterizing lactating sow posture in farrowing crates utilizing automated image capture and wearable sensors

- (Proceedings)Macon, A., Sharma, S., Lee, B., Markvicka, E., Rohrer, G.A., Miles, J.R., Brown-Brandl, T. 2021. Characterizing lactating sow posture in farrowing crates utilizing automated image capture and wearable sensors. Proceedings of the European Conference on Agricultural Engineering AgEng 2021, July 4-8, 2021, Evora, Portugal. p. 634-642.Parity and lactation stage affect the sow milk microbiome
                                                        

- (Abstract Only)Henniger, M.T., Rempel, L.A., Oliver, W.T., Miles, J.R., Lindholm-Perry, A.K., Myer, P.R. 2021. Parity and lactation stage affect the sow milk microbiome. Journal of Animal Science. 99(Supplement 3):498. https://doi.org/10.1093/jas/skab235.878.Uterine function during maternal recognition of pregnancy differs due to size of the ovarian reserve in beef heifers
                                                        

- (Abstract Only)Cushman, R.A., Rosasco, S., Epperson, K.M., Northrop-Albrecht, E.J., Rich, J.J., Chase, C., Miles, J.R., Crouse, M.S., Perry, G.A., Summers, A., Snider, A. 2021. Uterine function during maternal recognition of pregnancy differs due to size of the ovarian reserve in beef heifers [abstract]. Journal of Animal Science. 99(Supplement 3):123. Article 235. https://doi.org/10.1093/jas/skab235.225.Beef heifers with increased number of follicles have greater uterine luminal glucose concentrations
                                                        

- (Abstract Only)Snider, A., Crouse, M.S., Rosasco, S., Epperson, K.M., Northrop-Albrecht, E.J., Rich, J.J., Chase, C., Miles, J.R., Summers, A., Cushman, R.A. 2021. Beef heifers with increased number of follicles have greater uterine luminal glucose concentrations [abstract]. In: Proceedings of National American Society of Animal Science, Louisville, KY, July 14-18, 2021. Journal of Animal Science. 99(Supplement 3):128. https://doi.org/10.1093/jas/skab235.233.Ovarian follicular profiling of high- and low-immunocrit gilts on postnatal day 14
                                                        

- (Abstract Only)Lynnes, B.M., Cushman, R.A., Miles, J.R., Oliver, W.T., Bartol, F.F., Bagnell, C.A., Lents, C.A. 2021. Ovarian follicular profiling of high- and low-immunocrit gilts on postnatal day 14 [abstract]. Journal of Animal Science. 99(Supplement 1):150-151. https://doi.org/10.1093/jas/skab054.257.Epigenetic marks within the swine placenta are differentially expressed due to season
                                                        

- (Abstract Only)Cheek, R., Rempel, L.A., Miles, J.R. 2020. Epigenetic marks within the swine placenta are differentially expressed due to season. Journal of Animal Science. 98(Supplement2):80. https://doi.org/10.1093/jas/skz397.188.Utilization of a 3D hydrogel culture system to study reproductive process of conceptus elongation in vitro

- (Abstract Only)Genes associated with chromatin modification within the swine placenta are differentially expressed due to factors associated with season
                                                        

- (Peer Reviewed Journal)Rempel, L.A., Parrish, J.J., Miles, J.R. 2020. Genes associated with chromatin modification within the swine placenta are differentially expressed due to factors associated with season. Frontiers in Genetics. 11:1019. https://doi.org/10.3389/fgene.2020.01019.Early- and mid-lactation milk traits are associated with piglet growth during lactation
                                                        

- (Abstract Only)Rempel, L.A., Oliver, W.T., Miles, J.R. 2020. Early- and mid-lactation milk traits are associated with piglet growth during lactation [abstract]. In: Proceedings of American Society of Animal Science, Madison, WI, July 19-23, 2020. Journal of Animal Science. 98(Supplement 4):373-374. https://doi.org/10.1093/jas/skaa278.657.Uterine gland development and FOXA2 immunolocalization in gilts at postnatal 14 affected by lactocrine deficiency from birth

- (Abstract Only)Paranjpe, N.E., Ho, T., Wiley, A.A., Oliver, W.T., Miles, J.R., Lents, C.A., Bartol, F.F., Bagnell, C.A. 2020. Uterine gland development and FOXA2 immunolocalization in gilts at postnatal 14 affected by lactocrine deficiency from birth [abstract]. Society for the Study of Reproduction Annual Meeting, Virtual. p. 245. Abstract 1929. Available: https://www.ssr.org/news-events/past-meetings/ssrvirtual2020.Breed differences in placental development during late gestation between Chinese Meishan and White crossbred gilts in response to intrauterine crowding
                                                        

- (Peer Reviewed Journal)Miles, J.R., Vallet, J.L. 2021. Breed differences in placental development during late gestation between Chinese Meishan and White crossbred gilts in response to intrauterine crowding. Animal Production Science. 226:106711. https://doi.org/10.1016/j.anireprosci.2021.106711.Influence of age of dam on daughter reproductive performance and follicle numbers in beef heifers
                                                        

- (Abstract Only)Cushman, R., Spuri-Gomes, R., Tenley, S., Rosasco, S., Rich, J., Northrop, E., Miles, J., Lindholm-Perry, A., Keel, B., Perry, G., Summers, A., Cupp, A. 2020. Influence of age of dam on daughter reproductive performance and follicle numbers in beef heifers [abstract]. Journal of Animal Science. 98(Supplement 3):115. https://doi.org/10.1093/jas/skaa054.195.Metabolic compounds within the porcine uterine environment are unique to the type of conceptus present during the early stages of blastocyst elongation
                                                        

- (Peer Reviewed Journal)Walsh, S.C., Miles, J.R., Yao, L., Broeckling, C.D., Rempel, L.A., Wright-Johnson, E.C., Pannier, A.K. 2020. Metabolic compounds within the porcine uterine environment are unique to the type of conceptus present during the early stages of blastocyst elongation. Journal of Molecular Reproduction and Development. 87:174-190. https://doi.org/10.1002/mrd.23306.Brangus cows have ovarian reserve parameters more like Brahman than Angus cows
                                                        

- (Peer Reviewed Journal)Cushman, R.A., Soares, E.M., Yake, H.K., Patterson, A.L., Rosasco, S.L., Beard, J.K., Northrop, E.J., Rich, J.J., Miles, J.R., Chase, C.C., Gonda, M.G., Perry, G.A., McNeel, A.K., Summers, A.F. 2019. Brangus cows have ovarian reserve parameters more like Brahman than Angus cows. Animal Reproduction Science. 209:106170. https://doi.org/10.1016/j.anireprosci.2019.106170.Transcriptomic profiles of uniform populations of in vivo-produced spherical, ovoid, or tubular porcine embryos during the initiation of elongation
                                                        

- (Abstract Only)Walsh, S., Miles, J.R., Wright-Johnson, E.C., Keel, B.N., Rempel, L.A., Pannier, A.K. 2019. Transcriptomic profiles of uniform populations of in vivo-produced spherical, ovoid, or tubular porcine embryos during the initiation of elongation [abstract]. Reproduction, Fertility and Development. 32(2):152. https://doi.org/10.1071/RDv32n2Ab53.Relationship between early gestation maternal plasma progesterone concentrations and within-litter birth weight variation from Yorkshire sired litters
                                                        

- (Abstract Only)Miles, J.R., Rempel, L.A., Cushman, R.A., Lents, C.A. 2019. Relationship between early gestation maternal plasma progesterone concentrations and within-litter birth weight variation from Yorkshire sired litters [abstract]. Journal of Animal Science. 97(Supplement 3):368-369. https://doi.org/10.1093/jas/skz258.735.The influence of preovulatory estradiol on trophectoderm and uterine gene transcript abundance around maternal recognition of pregnancy in beef cattle

- (Abstract Only)Northrop, E.J., Rich, J.J., Cushman, R.A., Miles, J.R., Lindholm-Perry, A.K., Keel, B.N., Yao, R., Ge, X., Perry, G.A. 2019. The influence of preovulatory estradiol on trophectoderm and uterine gene transcript abundance around maternal recognition of pregnancy in beef cattle [abstract]. Society for the Study of Reproduction Annual Meeting. Abstract Program, p. 317.  Available: https://community.ssr.org/news-events/past-meetings/annual-meeting575Abundance of transcript for bovine interferon tau is decreased in blastocysts produced from ovaries with increased numbers of antral follicles

- (Abstract Only)Cushman, R.A., Northrop, E.J., Rich, J.J., Perry, G.A., Miles, J.R., Chase, Jr., C.C. 2019. Abundance of transcript for bovine interferon tau is decreased in blastocysts produced from ovaries with increased numbers of antral follicles [abstract]. Society for the Study of Reproduction Annual Meeting. Abstract Program p. 308. Available: https://community.ssr.org/news-events/past-meetings/annual-meeting575Impact of seasonality, storage of semen, and sperm head-shape on whole tissue methylation and expression of methylation responsive candidate genes in swine placenta and fetal livers from summer and winter breedings
                                                        

- (Peer Reviewed Journal)Rempel, L.A., Krautkramer, M.M., Parrish, J.J., Miles, J.R. 2019. Impact of seasonality, storage of semen, and sperm head-shape on whole tissue methylation and expression of methylation responsive candidate genes in swine placenta and fetal livers from summer and winter breedings. Molecular Reproduction and Development. 86(4):465-475. https://doi.org/10.1002/mrd.23125.Epigenetic marks within the swine placenta are differentially expressed due to factors associated with season
                                                        

- (Abstract Only)Rempel, L.A., Miles, J.R. 2019. Epigenetic marks within the swine placenta are differentially expressed due to factors associated with season [abstract]. Journal of Animal Science. 97(Supplement 2):124. Abstract 214. https://doi.org/10.1093/jas/skz122.221.Maternal age influences the number of primordial follicles in the ovaries of yearling Angus heifers
                                                        

- (Peer Reviewed Journal)Tenley, S.C., Spuri Gomes, R., Rosasco, S.L., Northrop, E.J., Rich, J.J., McNeel, A.K., Summers, A.F., Miles, J.R., Chase, Jr., C.C., Lents, C.A., Perry, G.A., Wood, J.R., Cupp, A.S., Cushman, R.A. 2019. Maternal age influences the number of primordial follicles in the ovaries of yearling Angus heifers. Animal Reproduction Science. 200:105-112. https://doi.org/10.1016/j.anireprosci.2018.12.004.Complete blood count data and leukocyte expression of cytokine genes and cytokine receptor genes associated with bovine respiratory disease in calves
                                                        

- (Peer Reviewed Journal)Lindholm-Perry, A.K., Kuehn, L.A., McDaneld, T.G., Miles, J.R., Workman, A.M., Chitko-McKown, C.G., Keele, J.W. 2018. Complete blood count data and leukocyte expression of cytokine genes and cytokine receptor genes associated with bovine respiratory disease in calves. BMC Research Notes. 11:786. https://doi.org/10.1186/s13104-018-3900-x.Neonatal lactocrine deficiency affects the adult porcine endometrial transcriptome at pregnancy day 13
                                                        

- (Peer Reviewed Journal)George, A.F., Ho, T., Prasad, N., Keel, B.N., Miles, J.R., Vallet, J.L., Bartol, F.F., Bagnell, C.A. 2019. Neonatal lactocrine deficiency affects the adult porcine endometrial transcriptome at pregnancy day 13. Biology of Reproduction. 100(1):71-85. https://doi.org/10.1093/biolre/ioy180.Non-targeted metabolomic profiles within the uterine milieu of porcine pregnancies containing populations of uniform or diverse spherical, ovoid or tubular conceptuses during initiation of embryo elongation
                                                        

- (Proceedings)Miles, J.R., Wright-Johnson, E.C., Walsh, S., Broeckling, C.D., Yao, L., Rempel, L.A., Pannier, A.K. 2018. Non-targeted metabolomic profiles within the uterine milieu of porcine pregnancies containing populations of uniform or diverse spherical, ovoid or tubular conceptuses during initiation of embryo elongation [abstract]. Reproduction, Fertility and Development. 31(1):154. https://doi.org/10.1071/RDv31n1Ab57.Genotypic differences in placental development during late gestation between Chinese Meishan and White crossbred gilts in response to intrauterine crowding

- (Abstract Only)Miles, J.R., Vallet, J.L. 2018. Genotypic differences in placental development during late gestation between Chinese Meishan and White crossbred gilts in response to intrauterine crowding [abstract]. In proceedings: Society for the Study of Reproduction 51st Annual Meeting, 10-13 July 2018, New Orleans, LA. p. 25-26. Available: https://www.ssr.org/sites/ssr.org/files/2018_annual_meeting_abstracts_updated.pdfImpact of seasonality and storage of semen on epigenetics in swine placenta and fetal livers

- (Abstract Only)Rempel, L.A., Krautkramer, M.M., Parrish, J.J., Miles, J.R. 2018. Impact of seasonality and storage of semen on epigenetics in swine placenta and fetal livers [abstract]. In proceedings: Society for the Study of Reproduction 51st Annual Meeting, 10-13 July 2018, New Orleans, LA. p. 27-28. Available: https://www.ssr.org/sites/ssr.org/files/2018_annual_meeting_abstracts_updated.pdfLong-term effects of lactocrine-deficiency on the global porcine endometrial transcriptome and the microRNA-mRNA interactome at pregnancy day 13

- (Abstract Only)George, A.F., Ho, T., Prasad, N., Keel, B.N., Miles, J.R., Vallet, J.L., Bartol, F.F., Bagnell, C.A. 2018. Long-term effects of lactocrine-deficiency on the global porcine endometrial transcriptome and the microRNA-mRNA interactome at pregnancy day 13 [abstract]. In proceedings: Society for the Study of Reproduction 51st Annual Meeting, 10-13 July 2018, New Orleans, LA. p. 23-24.  Available: https://www.ssr.org/sites/ssr.org/files/2018_annual_meeting_abstracts_updated.pdfMaternal age influences folliculogenesis and gene networks in the ovaries of beef heifers

- (Abstract Only)Cushman, R.A., Tenley, S.C., Spuri Gomes, R., Rosasco, S.L., Northrop, E.J., Rich, J.J., McNeel, A.K., Summers, A.F., Miles, J.R., Chase, C.C., Lents, C.A., Perry, G.A., Wood, J.R., Cupp, A.S. 2018. Maternal age influences folliculogenesis and gene networks in the ovaries of beef heifers [abstract]. Society for the Study of Reproduction Annual Meeting. Abstract Program p. 137-138. Available: https://www.ssr.org/sites/ssr.org/files/2018_annual_meeting_abstracts_updated.pdf.Season of collection and sperm head shape impacts expression of CARHSP and FTL from motile-rich boar sperm
                                                        

- (Peer Reviewed Journal)Rempel, L.A., Krautkramer, M.M., Loether, T.M., Parrish, J.J., Miles, J.R. 2018. Season of collection and sperm head shape impacts expression of CARHSP and FTL from motile-rich boar sperm. AGRI GENE. 7:1-6. https://doi.org/10.1016/j.aggene.2017.10.002.Expression of cytokine genes and receptors in white blood cells associated with divergent body weight gain in beef steers
                                                        

- (Peer Reviewed Journal)Lindholm-Perry, A.K., Artegoitia, V.M., Miles, J.R., Foote, A.P. 2017. Expression of cytokine genes and receptors in white blood cells associated with divergent body weight gain in beef steers. AGRI GENE. 6:37-39.. https://doi.org/10.1016/j.aggene.2017.09.005.Glucosamine supplementation during late gestation alters placental development and increases litter size
                                                        

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R., Freking, B.A., Meyer, S. 2017. Glucosamine supplementation during late gestation alters placental development and increases litter size. JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY. 8:68. https://doi.org/10.1186/s40104-017-0198-9.In vitro porcine blastocyst development in three-dimentional alginate hydrogels

- (Peer Reviewed Journal)Miles, J.R., Laughlin, T.D., Sargus-Patino, C.N., Pannier, A.K. 2017. In vitro porcine blastocyst development in three-dimentional alginate hydrogels. Molecular Reproduction and Development. 84(9):775-787. https://doi.org/10.1002/mrd.22814.Development of pre-implantation porcine blastocysts cultured within alginate hydrogel systems either supplemented with secreted phosphoprotein 1 or conjugated with Arg-Gly-Asp Peptide

- (Peer Reviewed Journal)Laughlin, T.D., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Lents, C.A., Pannier, A.K. 2017. Development of pre-implantation porcine blastocysts cultured within alginate hydrogel systems either supplemented with secreted phosphoprotein 1 or conjugated with Arg-Gly-Asp Peptide. Reproduction, Fertility and Development. 29(12):2345-2356. https://doi.org/10.1071/RD16366.Beef heifers with diminished numbers of antral follicles have decreased uterine protein concentrations
                                                        

- (Peer Reviewed Journal)McNeel, A.K., Soares, E.M., Patterson, A.L., Vallet, J.L., Wright, E.C., Larimore, E.L., Amundson, O.L., Miles, J.R., Chase Jr., C.C., Lents, C.A., Wood, J.R., Cupp, A.S., Perry, G.A., Cushman, R.A. 2017. Beef heifers with diminished numbers of antral follicles have decreased uterine protein concentrations. Animal Reproduction Science. 179:1-9. doi: 10.1016/j.anireprosci.2017.01.004.The effect of farrowing induction on colostrum and piglet serum immunocrits is dependent on parity
                                                        

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R. 2017. The effect of farrowing induction on colostrum and piglet serum immunocrits is dependent on parity. Journal of Animal Science. 95(2):688-696. doi:10.2527/jas.2016.0993.Genetic improvement of sow lifetime productivity

- (Abstract Only)Rohrer, G.A., Cross, A.J., Lents, C.A., Miles, J.R., Nonneman, D.J., Rempel, L.A. 2017. Genetic improvement of sow lifetime productivity. [Abstract] In proceedings: Midwestern Section of the American Society of Animal Science. March 13-15, 2017. Omaha, NE. Journal of Animal Science Supplement 95(Suppl 2):11-12  doi:10.2527/asasmw.2017.026.Non-targeted plasma metabolomic profile at early and late lactation in parity 1 dams with diverging body composition at weaning

- (Abstract Only)Rempel, L.A., Miles, J.R. 2014. Non-targeted plasma metabolomic profile at early and late lactation in parity 1 dams with diverging body composition at weaning [abstract]. Journal of Animal Science. 92(E-Supplement 2):954 (Abstract #1963).Non-targeted plasma metabolome of early and late lactation gilts
                                                        

- (Peer Reviewed Journal)Rempel, L.A., Miles, J.R., Oliver, W.T., Broeckling, C.D. 2016. Non-targeted plasma metabolome of early and late lactation gilts. Frontiers in Molecular Biosciences. 3:77. doi:10.3389/fmolb.2016.00077.Effect of antral follicle count in beef heifers on in vitro fertilization/production

- (Abstract Only)Chase, C.C., Cushman, R.A., McNeel, A.K., Wright-Johnson, E.C., Perry, G.A., Tenley, S.C., Wood, J.R., Cupp, A.S., Vallet, J.L., Miles, J.R. 2017. Effect of antral follicle count in beef heifers on in vitro fertilization/production [abstract]. Reproduction, Fertility and Development. 29(1):180.Impact of collection season and storage of semen on methylation activity in swine placental and fetal tissues derived from summer or winter breedings

- (Abstract Only)Rempel, L.A., Miles, J.R. 2016. Impact of collection season and storage of semen on methylation activity in swine placental and fetal tissues derived from summer or winter breedings [abstract]. International Society for Animal Genetics (35th ISAG). Abstract Book. p. 44 (Abstract # P2013).Non-targeted metabolomic evaluation of the uterine milieu during the transitional period of embryo elongation in the pig

- (Abstract Only)Miles, J.R., Wright-Johnson, E.C., Laughlin, T.D., Broeckling, C.D., Rempel, L.A., Pannier, A.K. 2016. Non-targeted metabolomic evaluation of the uterine milieu during the transitional period of embryo elongation in the pig [abstract]. Journal of Animal Science Supplement. 94 (E-Supplement 5):503-504 (Abstract # 1070).Evaluation of contributions to seasonal reproductive inefficiency; NPB project #14-052

- (Research Technical Update)Rempel, L.A., Miles, J.R., Parrish, J. 2016. Evaluation of contributions to seasonal reproductive inefficiency; NPB #14-052. National Pork Board. Available: http://research.pork.org/FileLibrary/ResearchDocuments/14-052-REMPEL-final%20rpt.pdf.Transcriptome differences in the rumen of beef steers with variation in feed intake and gain
                                                        

- (Peer Reviewed Journal)Kern, R.J., Lindholm-Perry, A.K., Freetly, H.C., Snelling, W.M., Kern, J.W., Keele, J.W., Miles, J.R., Foote, A.P., Oliver, W.T., Kuehn, L.A., Ludden, P.A. 2016. Transcriptome differences in the rumen of beef steers with variation in feed intake and gain. Gene. 586:12-26.Glucosamine supplementation affects placental development in swine

- (Abstract Only)Vallet, J., Miles, J., Freking, B., Meyer, S. 2016. Glucosamine supplementation affects placental development in swine [abstract]. Society for the Study of Reproduction Annual Meeting. Abstract # 287 (Scientific Program p. 181). Available: http://www.ssr.org/sites/ssr.org/files/uploads/attachments/node/320/2016_ssr_abstracts.pdfUterine and placenta characteristics during early vascular development in the pig from day 22 to 42 of gestation
                                                        

- (Peer Reviewed Journal)Wright, E.C., Miles, J.R., Lents, C.A., Rempel, L.A. 2016. Uterine and placenta characteristics during early vascular development in the pig from day 22 to 42 of gestation. Animal Reproduction Science. 164:14-22.Litter-of-origin trait effects on gilt development
                                                        

- (Peer Reviewed Journal)Vallet, J.L., Calderón-Díaz, J.A., Stalder, K.J., Phillips, C., Cushman, R.A., Miles, J.R., Rempel, L.A., Rohrer, G.A., Lents, C.A., Freking, B.A., Nonneman, D.J. 2016. Litter-of-origin trait effects on gilt development. Journal of Animal Science. 94(1):96-105.In vitro fertilization (IVF) using semi-defined culture conditions from low or high antral follicle count pubertal beef heifers

- (Abstract Only)Chase Jr., C.C., Cushman, R.A., McNeel, A.K., Amundson, O.L., Perry, G.A., Tenley, S.C., Wood, J.R., Cupp, A.S., Vallet, J.L., Miles, J.R. 2016. In vitro fertilization (IVF) using semi-defined culture conditions from low or high antral follicle count pubertal beef heifers. Reproduction, Fertility and Development. 28(1-2):221.Differences in transcript abundance of genes on BTA15 located within a region associated with gain in beef steers
                                                        

- (Peer Reviewed Journal)Lindholm-Perry, A.K., Kern, R.J., Kuehn, L.A., Snelling, W.M., Miles, J.R., Oliver, W.T., Freetly, H.C. 2015. Differences in transcript abundance of genes on BTA15 located within a region associated with gain in beef steers. Gene. 572(1):42-48. doi:10.1016/j.gene.2015.06.076.Can we make the pig placenta work better?

- (Abstract Only)Vallet, J.L., McNeel, A.K., Calderon-Diaz, J.A., Stalder, K.J., Phillips, C.E., Rohrer, G.A., Miles, J.R., Freking, B.A. 2015. Can we make the pig placenta work better? [abstract]. Society for the Study of Reproduction Annual Meeting. pp. 40-41 (Abstract #107). Available: https://www.ssr.org/Development of pre-implantation porcine embryos cultured within a three-dimensional alginate hydrogel system either conjugated with Arg-Gly-Asp (RGD) peptide or supplemented with secreted phosphoprotein 1 (SPP1)

- (Abstract Only)Miles, J., Laughlin, T., Wright-Johnson, E., Rempel, L., Pannier, A. 2015. Development of pre-implantation porcine embryos cultured within a three-dimensional alginate hydrogel system either conjugated with Arg-Gly-Asp (RGD) peptide or supplemented with secreted phosphoprotein 1 (SPP1) [abstract]. Society for the Study of Reproduction Annual Meeting. p. 172 (Abstract #432). Available: https://www.ssr.org/In vitro fertilization (IVF) from low or high antral follicle count pubertal beef heifers using semi-defined culture conditions

- (Abstract Only)Chase Jr., C.C., Cushman, R.A., McNeel, A.K., Wright-Johnson, E.C., Amundson, O.L., Larimore, E.L., Richardson, B.N., Perry, G.A., Tenley, S.C., Wood, J.R., Cupp, A.S., Vallet, J.L., Sypherd, D.D., Miles, J.R. 2015. In vitro fertilization (IVF) from low or high antral follicle count pubertal beef heifers using semi-defined culture conditions [abstract]. Journal of Animal Science. 93 (Supplement s3):424.Age at puberty, ovulation rate, and uterine length of developing gilts fed two lysine and three metabolizable energy concentrations from 100 to 260 d of age
                                                        

- (Peer Reviewed Journal)Calderón Díaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D.J., Miles, J.R., Wright, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C., Dedecker, A., Foxcroft, G., Stalder, K.J. 2015. Age at puberty, ovulation rate, and uterine length of developing gilts fed two lysine and three metabolizable energy concentrations from 100 to 260 d of age. Journal of Animal Science. 93(7):3521-3527.Seasonal and cryopreservation impacts on semen quality in boars

- (Abstract Only)Krautkramer, M.M., Parrish, J.J., Loether, T.M., Miles, J.R., Rempel, L.A. 2015. Seasonal and cryopreservation impacts on semen quality in boars [abstract]. Journal of Animal Science. 93(Supplement 2):185 (Abstract #413).Age at puberty, ovulation rate, and reproductive tract traits of developing gilts fed two lysine levels and three metabolizable energy levels from 100 to 260 d of age

- (Abstract Only)Calderon Diaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C.E., DeDecker, A.E., Foxcroft, G., Stalder, K. 2015. Age at puberty, ovulation rate, and reproductive tract traits of developing gilts fed two lysine levels and three metabolizable energy levels from 100 to 260 d of age [abstract]. Journal of Animal Science. 93(Supplement 2):81 (Abstract #180).Relationships between day one piglet serum immunoglobulin immunocrit and subsequent growth, puberty attainment, litter size, and lactation performance
                                                        

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R., Rempel, L.A., Nonneman, D.J., Lents, C.A. 2015. Relationships between day one piglet serum immunoglobulin immunocrit and subsequent growth, puberty attainment, litter size, and lactation performance. Journal of Animal Science. 93(6):2722-2729.Optimal dietary energy and protein for gilt development: Age at puberty, ovulation rate, and reproductive tract traits

- (Research Technical Update)Calderon Diaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D.J., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C., Dedecker, A., Foxcroft, G., Stalder, K.J. 2015. Optimal dietary energy and protein for gilt development: Age at puberty, ovulation rate, and reproductive tract traits. Iowa State University Animal Industry Report. AS 661(ASL R3022). Available: https://lib.dr.iastate.edu/asn_air/vol661/iss1/85.Contributions...uterine environment and piglet genotype on weaning survivability potential: II. Piglet growth, lactation performance, milk composition...blood profiles...lactation...reciprocal embryo transfers...Meishan and White...gilts
                                                        

- (Peer Reviewed Journal)Miles, J.R., Vallet, J.L., Ford, J.J., Freking, B.A., Oliver, W.T., Rempel, L.A. 2015. Contributions of the maternal uterine environment and piglet genotype on weaning survivability potential: II. Piglet growth, lactation performance, milk composition, and piglet blood profiles during lactation following reciprocal embryo transfers between Meishan and White crossbred gilts. Journal of Animal Science. 93(4):1555-1564.Metabolomic differences in early and late lactation first-parity gilts

- (Abstract Only)Rempel, L.A., Miles, J.R. 2015. Metabolomic differences in early and late lactation first-parity gilts [abstract]. Journal of Animal Science. 93(Supplement 2):8 (Abstract #17).Litter of origin effects on gilt development in a commercial setting

- (Abstract Only)Vallet, J.L., Calderon-Diaz, J.A., Stalder, K.J., Phillips, C.E., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Lents, C.A., Nonneman, D., Rohrer, G.A., Freking, B.A., Cushman, R.A. 2015. Litter of origin effects on gilt development in a commercial setting [abstract]. Journal of Animal Science. 93(Supplement 2):79-80 (Abstract #177).Genomewide association analysis for average birth interval and stillbirth in swine
                                                        

- (Peer Reviewed Journal)Schneider, J.F., Miles, J.R., Brown-Brandl, T.M., Nienaber, J.A., Rohrer, G.A., Vallet, J.L. 2015. Genomewide association analysis for average birth interval and stillbirth in swine. Journal of Animal Science. 93(2):529-540.Placental accommodations for transport and metabolism during intra-uterine crowding in pigs
                                                        

- (Review Article)Vallet, J.L., McNeel, A.K., Miles, J.R., Freking, B.A. 2014. Placental accommodations for transport and metabolism during intra-uterine crowding in pigs. Journal of Animal Science and Biotechnology. 5(1):55.Effect of increased systemic concentrations of urea nitrogen in crossbred heifers on in vitro fertilization (IVF)

- (Abstract Only)Chase, C.C., Amundson, O.L., Cushman, R.A., Freetly, H.C., McNeel, A.K., Wright-Johnson, E.C., Perry, G.A., Sypherd, D.D., Miles, J.R. 2015. Effect of increased systemic concentrations of urea nitrogen in crossbred heifers on in vitro fertilization (IVF)[abstract]. American Society of Animal Science, Southern Section, January 31-February 3, 2015, Atlanta, GA. p. 30.Effect of high and low antral follicle count in pubertal beef heifers on in vitro fertilization (IVF)

- (Abstract Only)Chase, Jr., C.C., Wright, E.C., McNeel, A.K., Cushman, R.A., Perry, G.A., Cupp, A.S., Vallet, J.L., Sypherd, D.D., Miles, J.R. 2014. Effect of high and low antral follicle count in pubertal beef heifers on in vitro fertilization (IVF) [abstract]. American Embryo Transfer Association/Canadian Embryo Transfer Association Joint Convention Proceedings, October 6-8, 2014, Middleton, Wisconsin.  49.Optimal dietary energy and protein for the development of gilts - NPB #12-209

- (Research Technical Update)Vallet, J., Calderon, J., Stalder, K., Phillips, C., Bradley, G., Miles, J., Rempel, L., Lents, C., Freking, B., Rohrer, G., Nonneman, D., Cushman, R. 2014. Optimal dietary energy and protein for the development of gilts - NPB #12-209. National Pork Board. Available: http://research.pork.org/FileLibrary/ResearchDocuments/12-209-Vallet-USDA.pdf.RNA-Seq detection of differential gene expression in the rumen of beef steers associated with feed efficiency phenotypes

- (Abstract Only)Kern, R.J., Lindholm-Perry, A.K., Freetly, H.C., Snelling, W.M., Kern, J.W., Miles, J.R., Ludden, P.A. 2014. RNA-Seq detection of differential gene expression in the rumen of beef steers associated with feed efficiency phenotypes [abstract]. Journal of Animal Science. 92(E-Supplement 2):918.Effect of essential fatty acid and zinc supplementation during pregnancy on birth intervals, neonatal piglet brain myelination, stillbirth, and preweaning mortality
                                                        

- (Peer Reviewed Journal)Vallet, J.L., Rempel, L.A., Miles, J.R., Webel, S.K. 2014. Effect of essential fatty acid and zinc supplementation during pregnancy on birth intervals, neonatal piglet brain myelination, stillbirth, and preweaning mortality. Journal of Animal Science. 92(6):2422-2432.DNA polymorphisms and transcript abundance of PRKAG2 and phosphorylated AMP-activated protein kinase in the rumen are associated with gain and feed intake in beef steers
                                                        

- (Peer Reviewed Journal)Lindholm-Perry, A.K., Kuehn, L.A., Oliver, W.T., Kern, R.J., Cushman, R.A., Miles, J.R., McNeel, A.K., Freetly, H.C. 2014. DNA polymorphisms and transcript abundance of PRKAG2 and phosphorylated AMP-activated protein kinase in the rumen are associated with gain and feed intake in beef steers. Animal Genetics. 45(4):461-472.Energy dynamics during fetal to neonatal transition and the influence of perinatal energy stores on early neonatal survival

- (Abstract Only)Miles, J.R. 2014. Energy dynamics during fetal to neonatal transition and the influence of perinatal energy stores on early neonatal survival [abstract]. Journal of Animal Science. 92(Supplement 2):85-86 (Abstract #192).Global changes in uterine protein secretion are associated with differences in the number of antral follicles in heifers

- (Abstract Only)Vallet, J.L., Cushman, R.A., McNeel, A.K., Wright, E.C., Larimore, E., Miles, J.R., Chase, C.C., Lents, C.A., Wood, J.R., Cupp, A.S., Perry, G.A. 2014. Global changes in uterine protein secretion are associated with differences in the number of antral follicles in heifers [abstract]. Journal of Animal Science. 92(Supplement 2):89 (Abstract #200).Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy
                                                        

- (Peer Reviewed Journal)Rohrer, G.A., Rempel, L.A., Miles, J.R., Keele, J.W., Wiedmann, R.T., Vallet, J.L. 2014. Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy. Animal Genetics. 45(3):340-349.Surface enlargement factor of rumen papillae and expression of genes involved in dermatological diseases and their relationships with feed intake in beef steers

- (Abstract Only)Kern, R.J., Lindholm-Perry, A.K., Freetly, H.C., Snelling, W.M., Miles, J.R., Ludden, P.A. 2014. Surface enlargement factor of rumen papillae and expression of genes involved in dermatological diseases and their relationships with feed intake in beef steers [abstract]. Journal of Animal Science. 92(Supplement 2):32.An evaluation of the differences in the rumen transcriptome among beef steers with extreme feed efficiency phenotypes

- (Abstract Only)Lindholm-Perry, A.K., Kern, R.J., Kuehn, L.A., Miles, J.R., Freetly, H.C., Snelling, W.M., Ludden, P.A. 2014. An evaluation of the differences in the rumen transcriptome among beef steers with extreme feed efficiency phenotypes.  Plant & Animal Genome XXII Conference, January 11-15, 2014, San Diego, CA. Abstract No. W155.Effect of progesterone on kisspeptin and neurokinin B cell numbers in the arcuate nucleus of the female pig

- (Abstract Only)Hileman, S.M., Meadows, L.J., Porter, K.L., Coolen, L.M., Fergani, C., Rempel, L.A., Cushman, R.A., Oliver, W.T., Wright, E.C., Miles, J.R., Lents, C.A. 2013. Effect of progesterone on kisspeptin and neurokinin B cell numbers in the arcuate nucleus of the female pig [abstract]. Abstracts of Society for Neuroscience Annual Meeting, November 9-13, 2013, San Diego, California. Poster # BBB25. Available: http://www.sfn.org/annual-meeting/past-and-future-annual-meetings.Adipose and muscle tissue gene expression of two genes (NCAPG and LCORL) located in a chromosomal region associated with cattle feed intake and gain
                                                        

- (Peer Reviewed Journal)Lindholm-Perry, A.K., Kuehn, L.A., Oliver, W.T., Sexten, A.K., Miles, J.R., Rempel, L.A., Cushman, R.A., Freetly, H.C. 2013. Adipose and muscle tissue gene expression of two genes (NCAPG and LCORL) located in a chromosomal region associated with cattle feed intake and gain. PLoS One. 8(11):e80882.The effect of soluble uterine factors on porcine embryo development within a three-dimensional alginate matrix system

- (Abstract Only)Sargus-Patino, C.N., Wright, E.C., Miles, J.R., Pannier, A.K. 2013. The effect of soluble uterine factors on porcine embryo development within a three-dimensional alginate matrix system [abstract]. In: Proceedings of the Tissue Engineering & Regenerative Medicine International Society - TERMIS-Americas 2013 (TERMIS-AM 2013) Conference and Exposition, November 10-13, 2013, Atlanta, Georgia.Uterine and placental interactions during necrotic tip development in the pig from day 22 to 42 of gestation

- (Abstract Only)Wright, E.C., Miles, J.R., Lents, C.A., Rempel, L.A. 2014. Uterine and placental interactions during necrotic tip development in the pig from day 22 to 42 of gestation. Reproduction, Fertility and Development. 26(1):153-154 (Abstract #79).Effect of high and low antral follicle count in pubertal beef heifers on IVF

- (Abstract Only)Chase, C.C., Jr., Wright, E.C., McNeel, A.K., Cushman, R.A., Perry, G.A., Cupp, A.S., Vallet, J.L., Sypherd, D.D., Miles, J.R. 2014. Effect of high and low antral follicle count in pubertal beef heifers on IVF. Reproduction, Fertility and Development. 26(1):184 (Abstract #142).In vitro development of preimplantation porcine embryos using alginate hydrogels as a three-dimensional extracellular matrix
                                                        

- (Peer Reviewed Journal)Sargus-Patino, C.N., Wright, E.C., Plautz, S.A., Miles, J.R., Vallet, J.L., Pannier, A.K. 2014. In vitro development of preimplantation porcine embryos using alginate hydrogels as a three-dimensional extracellular matrix. Reproduction, Fertility and Development. 26(7):943-953.Lipogenic-associated gene activity of adipose tissue from beef heifers and relation to production and reproductive traits

- (Abstract Only)Rempel, L.A., Cushman, R.A., McDaneld, T.G., Miles, J.R., Kuehn, L.A., Lindholm-Perry, A.K. 2013. Lipogenic-associated gene activity of adipose tissue from beef heifers and relation to production and reproductive traits. Journal of Animal Science. 91 (E-Supplement 2):466 (Abstract #510).Identification of an ionotropic glutamate receptor AMPA1/GRIA1 polymorphism in crossbred beef cows differing in fertility

- (Peer Reviewed Journal)Cushman, R.A., Miles, J.R., Rempel, L.A., McDaneld, T.G., Kuehn, L.A., Chitko-McKown, C.G., Nonneman, D., Echternkamp, S.E. 2013. Identification of an ionotropic glutamate receptor AMPA1/GRIA1 polymorphism in crossbred beef cows differing in fertility. Journal of Animal Science. 91(6):2640-2646.Effect of creatine supplementation during the last week of gestation on birth intervals, stillbirth, and preweaning mortality in pigs

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R., Rempel, L.A. 2013. Effect of creatine supplementation during the last week of gestation on birth intervals, stillbirth, and preweaning mortality in pigs. Journal of Animal Science. 91(5):2122-2132.Fetal liver glycogen production and glycogenic transcript expression during prenatal development from pig breeds differing in preweaning survivability

- (Abstract Only)Miles, J.R., Noel, J.A., Rempel, L.A., Vallet, J.L., Freking, B.A. 2013. Fetal liver glycogen production and glycogenic transcript expression during prenatal development from pig breeds differing in preweaning survivability [abstract]. Journal of Animal Science. 91 (Supplement 2):124 (Abstract #P105).Estrogen receptor 1 and 2 mRNA expression and protein localization in the porcine endometrium during the estrous cycle and early pregnancy

- (Abstract Only)Swanson, O.L., Miles, J.R., Vallet, J.L. 2013. Estrogen receptor 1 and 2 mRNA expression and protein localization in the porcine endometrium during the estrous cycle and early pregnancy [abstract]. Journal of Animal Science. 91 (Supplement 2):2-3 (Abstract #O006).Methylation patterns in fetal tissues generated from gilts inseminated with fresh or cryopreserved semen

- (Abstract Only)Rempel, L.A., Miles, J.R. 2013. Methylation patterns in fetal tissues generated from gilts inseminated with fresh or cryopreserved semen [abstract]. Journal of Animal Science. 91 (Supplement 2):123-124 (Abstract #P103).Identification of QTL affecting a piglet’s ability to acquire and absorb gamma-immunoglobulin from colostrum

- (Abstract Only)Rohrer, G.A., Rempel, L.A., Miles, J.R., Keele, J.W., Vallet, J.L. 2013. Identification of QTL affecting a piglet’s ability to acquire and absorb gamma-immunoglobulin from colostrum [abstract]. Journal of Animal Science. 91 (Supplement 2):63-64 (Abstract #O189).A simple novel measure of passive transfer of maternal immunoglobulin is predictive of preweaning mortality in piglets

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R., Rempel, L.A. 2013. A simple novel measure of passive transfer of maternal immunoglobulin is predictive of preweaning mortality in piglets. The Veterinary Journal. 195(1):91-97.Litter size influences lamb weight and ovarian reserve but not reproductive tract development or expression of genes involved in early follicular development

- (Abstract Only)Comparison of myelination between large and small pig fetuses during late gestation

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R. 2012. Comparison of myelination between large and small pig fetuses during late gestation. Animal Reproduction Science. 132(1-2):50-57.Adipose and muscle tissue expression of two genes (NCAPG and LCORL) located in a chromosomal region associated with cattle feed intake and gain

- (Abstract Only)Lindholm-Perry, A.K., Sexten, A.K., Kuehn, L.A., Rempel, L.A., Miles, J.R., Cushman, R.A., Freetly, H.C. 2012. Adipose and muscle tissue expression of two genes (NCAPG and LCORL) located in a chromosomal region associated with cattle feed intake and gain [abstract]. Journal of Animal Science. 90(Suppl. 3):453.Zearalenone enhances reproductive tract development, but does not alter skeletal muscle signaling in prepubertal gilts

- (Peer Reviewed Journal)Oliver, W.T., Miles, J.R., Diaz, D.E., Dibner, J.J., Rottinghaus, G.E., Harrell, R.J. 2012. Zearalenone enhances reproductive tract development, but does not alter skeletal muscle signaling in prepubertal gilts. Animal Feed Science And Technology. 174(1-2):79-85.Contributions of the maternal uterine environment and piglet genotype on weaning survivability potential: I. Development of neonatal piglets after reciprocal embryo transfers between Meishan and White crossbred gilts

- (Peer Reviewed Journal)Miles, J.R., Vallet, J.L., Ford, J.J., Freking, B.A., Cushman, R.A., Oliver, W.T., Rempel, L.A. 2012. Contributions of the maternal uterine environment and piglet genotype on weaning survivability potential: I. Development of neonatal piglets after reciprocal embryo transfers between Meishan and White crossbred gilts. Journal of Animal Science. 90(7):2181-2192.MicroRNA expression profile in bovine cumulus–oocyte complexes: Possible role of let-7 and miR-106a in the development of bovine oocytes

- (Peer Reviewed Journal)Miles, J.R., McDaneld, T.G., Wiedmann, R.T., Cushman, R.A., Echternkamp, S.E., Vallet, J.L., Smith, T.P.L. 2012. MicroRNA expression profile in bovine cumulus–oocyte complexes: Possible role of let-7 and miR-106a in the development of bovine oocytes. Animal Reproduction Sciences. 130(1-2):16-26.Differential gene regulation of steroidogenic transcripts and estradiol production following in vitro pig embryo elongation in alginate hydrogel three-dimensional matrix

- (Abstract Only)Miles, J.R., Sargus, C.N., Plautz, S.A., Vallet, J.L., Pannier, A.K. 2012. Differential gene regulation of steroidogenic transcripts and estradiol production following in vitro pig embryo elongation in alginate hydrogel three-dimensional matrix. Reproduction, Fertility and Development. 24(1):162 (Abstract #99).Association of porcine heparanase and hyaluronidase 1 and 2 with reproductive and production traits in a Landrace-Duroc-Yorkshire population

- (Peer Reviewed Journal)Rempel, L.A., Freking, B.A., Miles, J.R., Nonneman, D.J., Rohrer, G.A., Schneider, J.F., Vallet, J.L. 2011. Association of porcine heparanase and hyaluronidase 1 and 2 with reproductive and production traits in a Landrace-Duroc-Yorkshire population. Frontiers in Livestock Genomics. 2:20.Effect of empty uterine space on birth intervals and fetal and placental development in pigs

- (Peer Reviewed Journal)Vallet, J.L., Freking, B.A., Miles, J.R. 2011. Effect of empty uterine space on birth intervals and fetal and placental development in pigs. Animal Reproduction Sciences. 125:158-164.Piglet growth and blood components during lactation following reciprocal embryo transfer between Meishan and White crossbred gilts

- (Abstract Only)Miles, J.R., Vallet, J.L., Ford, J.J., Freking, B.A., Cushman, R.A., Oliver, W.T., Christenson, R.K. 2011. Piglet growth and blood components during lactation following reciprocal embryo transfer between Meishan and White crossbred gilts [abstract]. Reproduction, Fertility and Development. 23(1):177-178 (Abstract #148).In Vitro Elongation of Porcine Embryos Using Alginate Hydrogels as a Three-Dimensional Extracellular Matrix

- (Abstract Only)Sargus, C.N., Plautz, S.A., Miles, J.R., Vallet, J., Pannier, A.K. 2010. In vitro elongation of porcine embryos using alginate hydrogels as a three-dimensional extracellular matrix [abstract]. In: Proceedings of Biomedical Engineering Society (BMES) Annual Meeting, October 6-9, 2010, Austin, Texas. PS-7A-9-I 43.A Low-fat Liquid Diet Increases Protein Accretion and Alters Cellular Signaling for Protein Synthesis in 10-day-old Pigs

- (Peer Reviewed Journal)Oliver, W.T., Miles, J.R. 2010. A Low-fat Liquid Diet Increases Protein Accretion and Alters Cellular Signaling for Protein Synthesis in 10-day-old Pigs. Journal of Animal Science. 88(8):2576-2584.Reproductive Tract Differences in Repeat-Breeder Cows

- (Abstract Only)Cushman, R.A., Miles, J.R., Echternkamp, S.E. 2010. Reproductive Tract Differences in Repeat-Breeder Cows [abstract]. Journal of Animal Science. 88 (E-Supplement 2):220. (Abstract #168).The “Immunocrit,” a Simple Measure of Passive Transfer, is a Useful Predictor of Nursing Ability and Preweaning Mortality of Piglets

- (Abstract Only)Vallet, J.L., Miles, J.R., Rempel, L.A., Kuehn, L.A. 2010. The “Immunocrit,” a Simple Measure of Passive Transfer, is a Useful Predictor of Nursing Ability and Preweaning Mortality of Piglets [abstract]. Journal of Animal Science. 88(E-Supplement 2):501. (Abstract #523).Zearalenone Increases Reproductive Tract Development, but not Skeletal Muscle Signaling in Prepubertal Gilts

- (Abstract Only)Oliver, W.T., Miles, J.R., Diaz, D.E., Dibner, J.J., Rottinghaus, G.E., Harrell, R.J. 2010. Zearalenone Increases Reproductive Tract Development, but not Skeletal Muscle Signaling in Prepubertal Gilts [abstract]. Journal of Animal Science, 88(E-Supplement 2):113.Finishing Growth and Carcass Characteristics Following Reciprocal Embryo Transfer between Meishan and White Crossbred Pigs

- (Abstract Only)Miles, J.R., Vallet, J.L., Freking, B.A., Ford, J.J., Shackelford, S.D., Wheeler, T.L. 2010. Finishing Growth and Carcass Characteristics Following Reciprocal Embryo Transfer between Meishan and White Crossbred Pigs [abstract]. Journal of Animal Science. 88 (E-Supplement 2):355. (Abstract #T152).In Vitro Elongation of Porcine Embryos Using Alginate Hydrogels as a Three-Dimensional Extracellular Matrix

- (Abstract Only)Screening and Characterization of Spontaneous Porcine Congenital Heart Defects for Gene Identification and Models of Human Disease

- (Abstract Only)Metlay, L.A., Goldman, B.I., Cassady, J., Miles, J.R., Rohrer, G.A., Vallet, J.L., Ackerman, K.G. 2010. Screening and Characterization of Spontaneous Porcine Congenital Heart Defects for Gene Identification and Models of Human Disease [abstract]. Society for Pediatric Pathology Spring Meeting, Washington, D.C., 3/20-21/2010. #27. (available: http://www.spponline.org/2010-1SpringMtg/FullAbstractsAcceptedPresentationOrder.pdf)Myelination is Decreased in the Brain Stem of Small Piglets Compared to Larger Littermates During Late Gestation

- (Abstract Only)Vallet, J.L., Miles, J.R. 2010. Myelination is Decreased in the Brain Stem of Small Piglets Compared to Larger Littermates During Late Gestation [abstract]. Journal of Animal Science. 88 (E-Supplement 3):119-120. (Abstract #249).Proportion of the Litter Farrowed, Litter Size, and Progesterone and Estradiol Effects on Piglet Birth Intervals and Stillbirths

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R., Brown Brandl, T.M., Nienaber, J.A. 2010. Proportion of the Litter Farrowed, Litter Size, and Progesterone and Estradiol Effects on Piglet Birth Intervals and Stillbirths. Animal Reproduction Science. 119(1-2):68-75.Effect of Fetal Size on Fetal Placental Hyaluronan and Hyaluronoglucosaminidases Throughout Gestation in the Pig

- (Peer Reviewed Journal)Vallet, J.L., Miles, J.R., Freking, B.A. 2010. Effect of Fetal Size on Fetal Placental Hyaluronan and Hyaluronoglucosaminidases Throughout Gestation in the Pig. Animal Reproduction Science. 118(2-4):297-309.Molecular Cloning and Characterisation of Heparanase mRNA in Porcine Placenta Throughout Gestation

- (Peer Reviewed Journal)Miles, J.R., Vallet, J.L., Freking, B.A., Nonneman, D.J. 2009. Molecular Cloning and Characterisation of Heparanase mRNA in Porcine Placenta Throughout Gestation. Reproduction, Fertility and Development. 21(6):757-772.Development of the Pig Placenta

- (Review Article)Vallet, J.L., Miles, J.R., Freking, B.A. 2009. Development of the Pig Placenta. IN: Control of Pig Reproduction VIII (Rodriguez-Martinez, H., Vallet, J.L., Ziecik, A.J., eds.), Nottingham University Press. Proceedings of the Eighth International Conference on Pig Reproduction, May 31-June 4, 2009, The Banff Centre, Banff, Alberta, Canada. Society of Reproduction and Fertility Supplement. 66:265-279.Effect of Empty Uterine Space on Placental Development, Farrowing Intervals, and Stillbirth

- (Abstract Only)Vallet, J.L., Miles, J.R., Brown Brandl, T.M., Nienaber, J.A. 2009. Effect of Empty Uterine Space on Placental Development, Farrowing Intervals, and Stillbirth [abstract]. Proceedings of VIIIth International Conference on Pig Reproduction, Banff, Alberta, Canada, p. 158.MicroRNA Transcriptome Profiles During Swine Skeletal Muscle Development

- (Peer Reviewed Journal)McDaneld, T.G., Smith, T.P., Doumit, M.E., Miles, J.R., Coutinho, L.L., Sonstegard, T.S., Matukumalli, L.K., Nonneman, D.J., Wiedmann, R.T. 2009. MicroRNA Transcriptome Profiles During Swine Skeletal Muscle Development. Biomed Central (BMC) Genomics. 10:77.Development of Neonatal Piglets Following Reciprocal Embryo Transfers Between Meishan and White Crossbred Gilts

- (Abstract Only)Miles, J.R., Vallet, J.L., Ford, J.J., Freking, B.A., Cushman, R.A., Oliver, W.T., Christenson, R.K. 2009. Development of Neonatal Piglets Following Reciprocal Embryo Transfers Between Meishan and White Crossbred Gilts [abstract]. Proceedings of VIIIth International Conference on Pig Reproduction, Banff, Alberta, Canada, p. 148.Impact of Selection for Uterine Capacity on the Placental Transcriptome

- (Abstract Only)Freking, B.A., Miles, J.R., Bischoff, S.R., Tsai, S., Hardison, N., Xia, Y., Nonneman, D.J., Vallet, J.L., Piedrahita, J.A. 2009. Impact of Selection for Uterine Capacity on the Placental Transcriptome [Abstract]. In: Control of Pig Reproduction VIII (H. Rodriguez-Martinez, J.L. Vallet and A.J. Ziecik, eds.) Journal of Reproduction and Fertility Supplement. 66:207-208.MicroRNA expression profile in bovine cumulus-oocyte complexes during late oogenesis

- (Abstract Only)Miles, J.R., McDaneld, T.G., Wiedmann, R.T., Cushman, R.A., Echternkamp, S.E., Vallet, J.L., Smith, T.P.L. 2009. MicroRNA expression profile in bovine cumulus-oocyte complexes during late oogenesis [abstract]. Reproduction, Fertility and Development. 21(1):186 (Abstract #174).MicroRNA profiles of the fetal pig during skeletal muscle development

- (Abstract Only)McDaneld, T.G., Wiedmann, R.T., Miles, J.R., Smith, T.P. 2008. MicroRNA profiles in skeletal muscle of fetal pig. XXXI Animal Genetics International Conference Proceedings. Poster #2206.Conceptus development during blastocyst elongation in lines of pigs selected for increased uterine capacity or ovulation rate

- (Peer Reviewed Journal)Miles, J.R., Freking, B.A., Blomberg, L., Vallet, J.L., Zuelke, K.A. 2008. Conceptus development during blastocyst elongation in lines of pigs selected for increased uterine capacity or ovulation rate. Journal of Animal Science. 86(9):2126-2134.A low-fat liquid diet decreases AMPK and increases mTOR phosphorylation in skeletal muscle of 10-day-old pigs

- (Abstract Only)Oliver, W.T., Miles, J.R. 2008. A low-fat liquid diet decreases AMPK and increases mTOR phosphorylation in skeletal muscle of 10-day-old pigs [abstract]. Journal of Animal Science. 86(E-Supplement 2):560-561.Relationship of antral follicle counts to fertility and ovarian AMH mRNA levels in beef cows

- (Abstract Only)Cushman, R., Miles, J., Allan, M., Kuehn, L., Echternkamp, S., Freetly, H. 2008. Relationship of antral follicle counts to fertility and ovarian AMH mRNA levels in beef cows [abstract]. Biology of Reproduction. Special Issue:224 (Abstract #722).Placental hyaluronidase expression during gestation in swine

- (Abstract Only)Vallet, J., Miles, J., Freking, B. 2008. Placental hyaluronidase expression during gestation in swine [abstract]. Biology of Reproduction. Special Issue:217-218 (Abstract #694).Molecular cloning and characterization of heparanase mRNA in porcine placenta throughout gestation

- (Abstract Only)Miles, J., Vallet, J., Freking, B. 2008. Molecular cloning and characterization of heparanase mRNA in porcine placenta throughout gestation [abstract]. Biology of Reproduction. Special Issue:125-126 (Abstract #305).Placental transcriptome profile differences associated with selection for uterine capacity

- (Abstract Only)Freking, B.A., Miles, J.R., Bischoff, S.R., Xia, Y., Nonneman, D.J., Vallet, J.L., Piedrahita, J.A. 2008. Placental transcriptome profile differences associated with selection for uterine capacity [abstract]. Journal of Animal Science. 86(E-Suppl. 3):49. Abstract #36.MicroRNA (MiRNA) technology in livestock: expression profiling of bovine oocyte and developmental stages of porcine skeletal muscle

- (Proceedings)Mcdaneld, T.G., Wiedmann, R.T., Miles, J.R., Cushman, R.A., Vallet, J.L., Smith, T.P. 2007. MicroRNA (MiRNA) technology in livestock: expression profiling of bovine oocyte and developmental stages of porcine skeletal muscle. Conference Proc., National Swine Improvement Federation Conference & Ann. Mtg., Dec. 5-7, 2007. Kansas City, MO, NSIF Volume 32, www.nsif.com.Maternal plasma progesterone and estradiol concentrations prior to farrowing are not associated with either birth intervals or stillbirth rates in pigs

- (Abstract Only)Vallet, J.L., Nienaber, J.A., Brown Brandl, T.M., Miles, J.R. 2008. Maternal plasma progesterone and estradiol concentrations prior to farrowing are not associated with either birth intervals or stillbirth rates in pigs [abstract]. Journal of Animal Science. 86 (E-Supplement 3):107 (Abstract #234).Conceptus development during embryo elongation in lines of pigs selected for ovulation rate or uterine capacity

- (Abstract Only)Miles, J.R., Freking, B.A., Blomberg, L., Vallet, J.L. 2008. Conceptus development during embryo elongation in lines of pigs selected for ovulation rate or uterine capacity [abstract]. Journal of Animal Science. 86 (E-Supplement 3):107 (Abstract #233).COMPARATIVE TRANSCRIPTOME ANALYSIS OF IN VIVO AND IN VITRO PORCINE BLASTOCYSTS BY SMALL AMPLIFIED RNA SERIAL ANALYSIS OF GENE EXPRESSION (SAR-SAGE)

- (Peer Reviewed Journal)Miles, J.R., Blomberg, L.A., Krisher, R.L., Everts, R.E., Sonstegard, T.S., Van Tassell, C.P., Zuelke, K.A. 2008. Comparative transcriptome analysis of in vivo- and in vitro- produced porcine blastocysts by small amplified RNA-serial analysis of gene expression (SAR-SAGE). Molecular Reproduction and Development. 75:976-88.Differential gene regulation of estrogen receptor 1 and 2 in the porcine endometrium during the pre-implantation period of pregnancy

- (Abstract Only)Miles, J., Vallet, J. 2007. Differential gene regulation of estrogen receptor 1 and 2 in the porcine endometrium during the pre-implantation period of pregnancy [abstract]. Biology of Reproduction. Special Issue:127.Factors affecting litter size in pigs

- (Proceedings)Vallet, J.L., Freking, B.A., Miles, J.R., Nienaber, J.A., Brown Brandl, T.M. 2006. Factors affecting litter size in pigs. Proceedings National Swine Improvement Federation (NSIF) Conference and Annual Meeting (7-8 Dec 2006; Nashville, TN). NSIF Vol. 31:15-21.Characterization of mRNA expression for the endothelial differentiation G-protein-coupled (EDG) receptors in porcine endometrial tissue during the pre-implantation period of pregnancy

- (Abstract Only)Miles, J., Vallet, J. 2007. Characterization of mRNA expression for the endothelial differentiation G-protein-coupled (EDG) receptors in porcine endometrial tissue during the pre-implantation period of pregnancy [abstract]. Journal of Animal Science. 85 (Supplement 2):117-118. (Abstract #235)Seasonal, litter size and birth order effects on farrowing intervals and stillbirth rate in swine

- (Abstract Only)Vallet, J.L., Nienaber, J.A., Brown-Brandl, T.M., Miles, J.R. 2007. Seasonal, litter size, and birth order effects on farrowing intervals and stillbirth rate in swine [abstract]. Journal of Animal Science. 85 (Supplement 2):118. (Abstract #236)IDENTFICATION OF MRNAS ASSOCIATED WITH GONADOTROPIN-INDUCED MATURATION OF MURINE CUMULUS OOCYTE COMPLEXES USING SERIAL ANALYSIS OF GENE EXPRESSION (SAGE)

- (Peer Reviewed Journal)Rodriguez, K.F., Blomberg, L., Zuelke, K.A., Miles, J.R., Alexander, J.E., Farin, C.E. 2006. Identfication of mrnas associated with gonadotropin-induced maturation of murine cumulus oocyte complexes using serial analysis of gene expression (sage). Physiological Genomics. 27(3):318-327.SMALL AMPLIFED RNA- SERIAL ANALYSIS OF GENE EXPRESSION (SAR-SAGE) FROM PORCINE BLASTOCYSTS PRODUCED IN VIVO OR IN VITRO

- (Abstract Only)This is a poster presentation for BARC Poster Day 4/26/2006.TRANSCRIPTOME PROFILING OF THE TUBULAR PORCINE CONCEPTUS IDENTIFIES THE DIFFERENTIAL REGULATION OF GROWTH AN DDEVELOPMENTALLY ASSOCIATED GENES

- (Peer Reviewed Journal)Blomberg, L., Garrett, W.M., Guillomot, M., Miles, J.R., Sonstegard, T.S., Van Tassell, C.P., Zuelke, K.A. 2006. Transcriptome profiling of the tubular porcine conceptus identifies the differential regulation of growth and developmentally associated genes. Molecular Reproduction and Development. 73(12):1491-1502.UNIQUE EXPRESSION PATTERNS OF DIFFERENTIATION, GROWTH AND CELL STRUCTURE FACTORS IN THE ELONGATING PORCINE CONCEPTUS

- (Abstract Only)Blomberg, L., Miles, J.R., Talbot, N.C., Garrett, W.M., Zuelke, K.A. 2006. Unique expression patterns of differentiation, growth and cell structure factors in the elongating porcine conceptus. Reproduction, Fertility and Development.  18:170.LINES OF PIGS SELECTED FOR COMPONENT TRAITS OF LITTER SIZE EXHIBIT DIFFERENTIAL GENE REGULATION AT THE ONSET OF EMBRYO (TROPHOECTODERM) ELONGATION

- (Abstract Only)Miles, J.R., Blomberg, L., Freking, B.A., Zuelke, K.A. 2006. Lines of pigs selected for component traits of litter size exhibit differential gene regulation at the onset of embryo (trophoectoderm) elongation [abstract]. International Embryo Transfer Society Annual Meeting. 18:235-236.PIG LINES GENETICALLY SELECTED FOR COMPONENT TRAITS OF LITTER SIZE EXHIBIT DIFFERENTIAL GENE REGULATION AT THE ONSET OF EMBRYO (TROPHECTODERM) ELONGATION

- (Abstract Only)This is a poster presentation for BARC Poster Day on 5/12/2005.


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