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                    U.S. DEPARTMENT OF AGRICULTURE
 Produce Safety and Microbiology Research: Albany, CA
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ARS Home Pacific West Area Albany, California Western Regional Research Center Produce Safety and Microbiology Research People & Locations







Vivian  Wu
                        Produce Safety and Microbiology Research

                        




                        
                        Research Leader
                        Phone: (510) 559-5829
                        
                        
                        Fax: (510) 559-6162(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)
                            ProjectsPrevention of Pathogen Contamination in the Lettuce Production Continuum - UC Davis
                                                    Cooperative Agreement
                                                                    (A)Accession Number: 441197Prevention of Pathogen Contamination in the Lettuce Production Continuum - TTU
                                                    Cooperative Agreement
                                                                    (A)Accession Number: 441200Prevention of Pathogen Contamination in the Lettuce Production Continuum- U-Arizona
                                                    Cooperative Agreement
                                                                    (A)Accession Number: 441201Novel Isochoric Processing for Sustainable, Safe and High Quality Preservation of Fluid Foods
                                                    Cooperative Agreement
                                                                    (A)Accession Number: 443408Rapid Antemortem Tests for the Early Detection of Transmissible Spongiform Encephalopathies and Other Animal Diseases
                                                    In-House Appropriated
                                                                    (D)Accession Number: 441758Elucidating the Factors that Determine the Ecology of Human Pathogens in Foods
                                                    In-House Appropriated
                                                                    (D)Accession Number: 440168Prevention of Pathogen Contamination in the Lettuce Production Continuum
                                                    Interagency Reimbursable Agreement
                                                                    (I)Accession Number: 441164Response to APHIS SARS-CoV-2 Research Priorities Phase 1
                                                    Interagency Reimbursable Agreement
                                                                    (I)Accession Number: 441231Aptamer-based Pen-side Diagnostics for Rapid Detection of SARS-CoV-2 Variants
                                                    Interagency Reimbursable Agreement
                                                                    (I)Accession Number: 442558Developing an Aptamer Magnetic Nanoparticle-Based Lateral Flow Assay for Detecting Pathogens
                                                    Non-Funded Cooperative Agreement
                                                                    (N)Accession Number: 436366Develop Novel Technology to Respond to Emerging Agriculture Problems in Animal and Food Caused by Pathogens
                                                    Non-Assistance Cooperative Agreement
                                                                    (S)Accession Number: 445825Implementation of gaseous chlorine dioxide fumigation to improve post-harvest stockpile management of almonds
                                                    Trust Fund Cooperative Agreement
                                                                    (T)Accession Number: 439610**Publications**
                                                (Clicking on the reprint icon
                                                    Reprint Icon
                                                    will take you to the publication reprint.)Transcriptional analysis of Escherichia coli O157:H7 and a non-pathogenic E. coli in response to the chlorine treatment regulated by the U.S. Environmental Protection Agency

- (Abstract Only)Aptamer-linked Immobilized Sorbent Assay for detecting Foot and Mouth Disease (FMD) Virus VP1 Serotype O

- (Abstract Only)DeepPL: a deep-learning-based tool for the prediction of bacteriophage lifecycle

- (Abstract Only)A new member of Tequintavirus bacteriophage isolated from sewage water with antimicrobial potential against multidrug-resistant Salmonella Infantis strains

- (Abstract Only)A new Rogue-like Escherichia phage UDF157lw to control Escherichia coli O157:H7
                                                        

- (Peer Reviewed Journal)Liao, Y., Ho, K., Zhang, Y., Salvador, A., Wu, V.C. 2024. A new Rogue-like Escherichia phage UDF157lw to control Escherichia coli O157:H7. Frontiers in Microbiology. 14. Article 1302032. https://doi.org/10.3389/fmicb.2023.1302032.Gut phageome- an insight into the role and impact of the gut microbiome and their correlation with mammal health and diseases
                                                        

- (Review Article)Zhang, Y.N., Sharma, S., Tom, L., Liao, Y., Wu, V.C. 2023. Gut phageome- an insight into the role and impact of the gut microbiome and their correlation with mammal health and diseases. Microorganisms. 11(10). Article 2454. https://doi.org/10.3390/microorganisms11102454.Characterization of Shiga toxin-producing Escherichia coli bacteriophages isolated from agricultural environments and examination of their prevalence with bacterial hosts
                                                        

- (Peer Reviewed Journal)Quintela, I.A., Valentine, D.C., Hwang, A., Vasse, T., Ho, K., Wu, V.C. 2023. Characterization of Shiga toxin-producing Escherichia coli bacteriophages isolated from agricultural environments and examination of their prevalence with bacterial hosts. Journal of Food Safety. Article e13084. https://doi.org/10.1111/jfs.13084.Metagenomic investigation reveals bacteriophage-mediated horizontal transfer of antibiotic resistance genes in microbial communities of an organic agricultural ecosystem
                                                        

- (Peer Reviewed Journal)Zhang, Y., Kitazumi, A., Liao, Y., De Los Reyes, B.G., Wu, V.C. 2023. Metagenomic investigation reveals bacteriophage-mediated horizontal transfer of antibiotic resistance genes in microbial communities of an organic agricultural ecosystem. Microbiology Spectrum. Article e00226-23. https://doi.org/10.1128/spectrum.00226-23.The effects of sanitizing hurdles against foodborne pathogens during blueberry processing
                                                        

- (Peer Reviewed Journal)Lacombe, A.C., Wu, V.C. 2023. The effects of sanitizing hurdles against foodborne pathogens during blueberry processing. Food Control. 154. Article 109981. https://doi.org/10.1016/j.foodcont.2023.109981.Efficacy of gaseous chlorine dioxide (ClO2) treatment on quality parameters and against Listeria innocua growth on apple surfaces under controlled atmosphere (CA) storage condition and post-treatment quality analysis

- (Peer Reviewed Journal)Outcomes of stakeholder meeting discussing outreach efforts of waterless, non-thermal food processing technology USDA
coordinated agriculture project / speaker's corner

- (Abstract Only)Characterization and encapsulation of a Salmonella phage cocktail for the biocontrol potential of Salmonella spp. in gastrointestinal environments

- (Abstract Only)Antimicrobial potential of a new Rogue-like Escherichia coli phage UDF157lw against E. coli O157:H7 biofilm

- (Abstract Only)Microbiome profiles of an organic agricultural environment microcosm: A window to bacteriophage-bacterial population dynamics and the evolution of antibiotic resistance in the agricultural environment microbiome

- (Abstract Only)Comparative metagenomics reveal the effect of diet on the fecal virome and the associations with production traits of beef cattle

- (Abstract Only)Reduction of Aspergillus flavus and aflatoxin AFB1 on almond kernels using gaseous chlorine dioxide fumigation

- (Abstract Only)The role of temperate phages in bacterial pathogenicity
                                                        

- (Review Article)Gummalla, V., Zhang, Y., Liao, Y., Wu, V.C. 2023. The role of temperate phages in bacterial pathogenicity. Microorganisms. 11(3). Article 541. https://doi.org/10.3390/microorganisms11030541.A new Kayfunavirus-like Escherichia phage vB_EcoP-Ro45lw with antimicrobial potential of Shiga toxin-producing Escherichia coli O45 strain
                                                        

- (Peer Reviewed Journal)Sun, X., Liao, Y., Zhang, Y., Salvador, A., Ho, K., Wu, V.C. 2022. A new Kayfunavirus-like Escherichia phage vB_EcoP-Ro45lw with antimicrobial potential of Shiga toxin-producing Escherichia coli O45 strain. Microorganisms. 11(1). Article 77. https://doi.org/10.3390/microorganisms11010077.Shiga toxin-producing Escherichia coli outbreaks in California’s leafy greens production continuum
                                                        

- (Review Article)Lacombe, A.C., Quintela, I.A., Liao, Y., Wu, V.C. 2022. Shiga toxin-producing Escherichia coli outbreaks in California’s leafy greens production continuum. Frontiers In Food Science And Technology. 2. Article 1068690. https://doi.org/10.3389/frfst.2022.1068690.Advances, applications, and limitations of portable and rapid detection technologies for routinely encountered foodborne pathogens
                                                        

- (Review Article)Quintela, I.A., Vasse, T., Lin, C., Wu, V.C. 2022. Advances, applications, and limitations of portable and rapid detection technologies for routinely encountered foodborne pathogens. Frontiers in Microbiology. 13. Article 1054782. https://doi.org/10.3389/fmicb.2022.1054782.Characterization of polyvalent Escherichia phage Sa157lw for the biocontrol potential of Salmonella Typhimurium and Escherichia coli O157:H7 on contaminated mung bean seeds
                                                        

- (Peer Reviewed Journal)Liao, Y., Zhang, Y., Salvador, A., Ho, K., Cooley, M.B., Wu, V.C. 2022. Characterization of polyvalent Escherichia phage Sa157lw for the biocontrol potential of Salmonella Typhimurium and Escherichia coli O157:H7 on contaminated mung bean seeds. Frontiers in Microbiology. 13. Article 1053583. https://doi.org/10.3389/fmicb.2022.1053583.Vibrio parahaemolyticus in seafood: Recent progress in understanding influential factors at harvest and food-safety intervention approaches
                                                        

- (Peer Reviewed Journal)Ndraha, N., Huang, L., Wu, V.C., Hsiao, H. 2022. Vibrio parahaemolyticus in seafood: Recent progress in understanding influential factors at harvest and food-safety intervention approaches. Current Opinion in Food Science. 48. Article 100927. https://doi.org/10.1016/j.cofs.2022.100927.Reduction of Aspergillus flavus and aflatoxin AFB1 on almond kernels using gaseous chlorine dioxide fumigation

- (Peer Reviewed Journal)Isochoric freezing and isochoric supercooling as innovative postharvest technologies for pomegranate preservation
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Chiou, B., Takeoka, G.R., Williams, T.G., Wood, D.F., Powell-Palm, M., Rubinsky, B., Wu, V.C., McHugh, T.H. 2022. Isochoric freezing and isochoric supercooling as innovative postharvest technologies for pomegranate preservation. Postharvest Biology and Technology. 194. Article 112072. https://doi.org/10.1016/j.postharvbio.2022.112072.Fundamental differences in inactivation mechanisms of Escherichia coli O157:H7 between chlorine dioxide and sodium hypochlorite
                                                        

- (Peer Reviewed Journal)Bridges, D.F., Lacombe, A.C., Wu, V.C. 2022. Fundamental differences in inactivation mechanisms of Escherichia coli O157:H7 between chlorine dioxide and sodium hypochlorite. Frontiers in Microbiology. 13. Article 923964. https://doi.org/10.3389/fmicb.2022.923964.Whole-genome analysis of Escherichia phage vB_EcoM-S1P5QW, isolated from manures collected from cattle farms in Maine
                                                        

- (Peer Reviewed Journal)Quintela, I.A., Hwang, A., Vasse, T., Salvador, A., Zhang, Y., Liao, Y., Wu, V.C. 2022. Whole-genome analysis of Escherichia phage vB_EcoM-S1P5QW, isolated from manures collected from cattle farms in Maine. Microbiology Resource Announcements. 11(4). Article e00041-22. https://doi.org/10.1128/mra.00041-22.Characterization of a T4-like bacteriophage vB_EcoM-Sa45lw as a potential biocontrol agent for Shiga toxin-producing Escherichia coli O45 contaminated on Mung Bean seeds
                                                        

- (Peer Reviewed Journal)Liao, Y., Zhang, Y., Salvador, A., Harden, L.A., Wu, V.C. 2022. Characterization of a T4-like bacteriophage vB_EcoM-Sa45lw as a potential biocontrol agent for Shiga toxin-producing Escherichia coli O45 contaminated on Mung Bean seeds. Microbiology Spectrum. 10(1). Article e02220-21. https://doi.org/10.1128/spectrum.02220-21.A review: Gaseous interventions for Listeria monocytogenes control in fresh apple cold storage
                                                        

- (Review Article)Guan, J., Lacombe, A.C., Rane, B., Tang, J., Sablani, S., Wu, V.C. 2021. A review: Gaseous interventions for Listeria monocytogenes control in fresh apple cold storage. Frontiers in Microbiology. 12. Article 782934. https://doi.org/10.3389/fmicb.2021.782934.Gaseous chlorine dioxide inactivation of microbial contamination on whole black peppercorns
                                                        

- (Peer Reviewed Journal)Rane, B., Lacombe, A.C., Guan, J., Bridges, D.F., Sablani, S., Tang, J., Wu, V.C. 2021. Gaseous chlorine dioxide inactivation of microbial contamination on whole black peppercorns. Journal of Food Safety. Article e12948. https://doi.org/10.1111/jfs.12948.Responses of Escherichia coli and Listeria monocytogenes to ozone treatment on non-host tomato: Efficacy of intervention and evidence of induced acclimation
                                                        

- (Peer Reviewed Journal)Shu, X., Singh, M., Karampudi, N., Bridges, D.F., Kitazumi, A., Wu, V.C., De los Reyes, B.G. 2021. Responses of Escherichia coli and Listeria monocytogenes to ozone treatment on non-host tomato: Efficacy of intervention and evidence of induced acclimation. PLoS ONE. 16(10). Article e0256324. https://doi.org/10.1371/journal.pone.0256324.A pilot-scale evaluation of using gaseous chlorine dioxide for decontamination of foodborne pathogens on produce and low-moisture foods
                                                        

- (Peer Reviewed Journal)Tan, J.N., Hwang, C., Huang, L., Wu, V.C., Hsiao, H. 2021. A pilot-scale evaluation of using gaseous chlorine dioxide for decontamination of foodborne pathogens on produce and low-moisture foods. Journal of Food Safety. http://doi.org/10.1111/jfs.12937.Efficacy of gaseous chlorine dioxide for decontamination of Salmonella, Shiga toxin-producing Escherichia coli, and Listeria monocytogenes on almonds and peppercorns
                                                        

- (Peer Reviewed Journal)Chai, H., Hwang, C., Huang, L., Wu, V.C., Sheen, L. 2021. Efficacy of gaseous chlorine dioxide for decontamination of Salmonella, Shiga toxin-producing Escherichia coli, and Listeria monocytogenes on almonds and peppercorns. Food Control. https://doi.org/10.1016/j.foodcont.2021.108556.A review of epidemic investigation on cold-chain food-mediated SARS-CoV-2 transmission and food safety consideration during COVID-19 pandemic
                                                        

- (Review Article)Lu, L., Quintela, I.A., Lin, C., Lin, T., Lin, C., Wu, V.C., Lin, C. 2021. A review of epidemic investigation on cold-chain food-mediated SARS-CoV-2 transmission and food safety consideration during COVID-19 pandemic. Journal of Food Safety. 41(6). Article e12932. https://doi.org/10.1111/jfs.12932.Characterization of two new Shiga toxin-producing Escherichia coli O103-infecting phages isolated from an organic farm
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Salvador, A., Lavenburg, M.V., Wu, V.C. 2021. Characterization of two new Shiga toxin-producing Escherichia coli O103-infecting phages isolated from an organic farm. Microorganisms. 9(7):1527. https://doi.org/10.3390/microorganisms9071527.Enhanced detection of major pathogens and toxins in poultry and livestock with zoonotic risks using nanomaterials-based diagnostics
                                                        

- (Review Article)Manhas, P.K., Quintela, I.A., Wu, V.C. 2021. Enhanced detection of major pathogens and toxins in poultry and livestock with zoonotic risks using nanomaterials-based diagnostics. Frontiers in Veterinary Science. 8. Article 673718. https://doi.org/10.3389/fvets.2021.673718.Preservation of grape tomato by isochoric freezing
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Sinrod, A., Dao, L.T., Takeoka, G.R., Williams, T.G., Wood, D.F., Chiou, B., Bridges, D.F., Wu, V.C., Lyu, C., Powell-Palm, M.J., Rubinsky, B., McHugh, T.H. 2021. Preservation of grape tomato by isochoric freezing. Food Research International. 143. Article 110228. https://doi.org/10.1016/j.foodres.2021.110228.Preservation of grape tomato by isochoric freezing
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Sinrod, A., Dao, L.T., Takeoka, G.R., Williams, T.G., Wood, D.F., Chiou, B., Bridges, D.F., Wu, V.C., Lyu, C., Powell-Palm, M.J., Rubinsky, B., McHugh, T.H. 2021. Preservation of grape tomato by isochoric freezing. Food Research International. 143. Article 110228. https://doi.org/10.1016/j.foodres.2021.110228.Genomic characterization of two Shiga toxin-converting bacteriophages induced from environmental Shiga toxin-producing Escherichia coli.
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Salvador, A., Wu, V.C. 2021. Genomic characterization of two Shiga toxin-converting bacteriophages induced from environmental Shiga toxin-producing Escherichia coli. Frontiers in Microbiology. 12. Article 587696. https://doi.org/10.3389/fmicb.2021.587696.Use of mathematic models to describe the microbial inactivation on baby carrots by gaseous chlorine dioxide
                                                        

- (Peer Reviewed Journal)Guan, J., Lacombe, A.C., Tang, J., Bridges, D.F., Sablani, S., Rane, B., Wu, V.C. 2021. Use of mathematic models to describe the microbial inactivation on baby carrots by gaseous chlorine dioxide. Food Control. 123. Article 107832. https://doi.org/10.1016/j.foodcont.2020.107832.Food safety lessons learned from the COVID-19 pandemic
                                                        

- (Review Article)Lacombe, A.C., Quintela, I.A., Liao, Y., Wu, V.C. 2020. Food safety lessons learned from the COVID-19 pandemic. Journal of Food Safety. 41:2. https://doi.org/10.1111/jfs.12878.Effects of moisture content and mild heat on the ability of gaseous chlorine dioxide against salmonella and enterococcus faecium NRRL B-2354 on almonds
                                                        

- (Peer Reviewed Journal)Rane, B., Lacombe, A.C., Sablani, S., Bridges, D.F., Tang, J., Guan, J., Wu, V.C. 2021. Effects of moisture content and mild heat on the ability of gaseous chlorine dioxide against salmonella and enterococcus faecium NRRL B-2354 on almonds. Food Control. 123. Article 107732. https://doi.org/10.1016/j.foodcont.2020.107732.Whole-genome analysis of a Shiga toxin-producing Escherichia coli O103:H2 strain isolated from cattle feces
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Wu, V.C. 2020. Whole-genome analysis of a Shiga toxin-producing Escherichia coli O103:H2 strain isolated from cattle feces. Microbiology Resource Announcements. 9:45. https://doi.org/10.1128/MRA.00896-20.The effects of environmental factors on the prevalence and diversity of bacteriophages lytic against top six non-O157 Shiga toxin-producing Escherichia coli on an organic farm
                                                        

- (Peer Reviewed Journal)Liao, Y., Lavenburg, V., Lennon, M., Salvador, A., Hsu, A.L., Wu, V.C.H. 2020. The effects of environmental factors on the prevalence and diversity of bacteriophages lytic against top 6 non-O157 Shiga toxin-producing Escherichia coli on an organic farm. Journal of Food Safety. https://doi.org/10.1111/jfs.12865.Use of lytic bacteriophages as an antimicrobial intervention to improve produce safety

- (Abstract Only)Effects of lyophilization on the stability of bacteriophages against different serogroups of Shiga toxin-producing Escherichia coli
                                                        

- (Peer Reviewed Journal)Lavenburg, V., Liao, Y., Salvador, A., Hsu, A.L., Harden, L.A., Wu, V.C. 2020. Effects of lyophilization on the stability of bacteriophages against different serogroups of Shiga toxin-producing Escherichia coli. Cryobiology. 96:85-91. https://doi.org/10.1016/j.cryobiol.2020.07.012.Effect of isochoric freezing on quality aspects of minimally processed potatoes
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Zhao, Y., Takeoka, G.R., Williams, T.G., Wood, D.F., Chiou, B., Powell-Palm, M., Wu, V.C., Rubinsky, B., McHugh, T.H. 2020. Effect of isochoric freezing on quality aspects of minimally processed potatoes. Journal of Food Science. 85(9):2656-2664. https://doi.org/10.1111/1750-3841.15377.Viability of listeria monocytogenes and salmonella typhimurium after isochoric freezing
                                                        

- (Peer Reviewed Journal)Bridges, D.F., Bilbao-Sainz, C., Powell-Palm, M.J., Williams, T.G., Wood, D.F., Sinrod, A., Ukpai, G., McHugh, T.H., Rubinsky, B., Wu, V.C.H. 2020. Viability of listeria monocytogenes and salmonella typhimurium after isochoric freezing. Journal of Food Safety. 40(5). Article e12840. https://doi.org/10.1111/jfs.12840.Gaseous antimicrobial treatments to control foodborne pathogens on almond kernels and whole black peppercorns
                                                        

- (Peer Reviewed Journal)Rane, B., Bridges, D.F., Wu, V.C. 2020. Gaseous antimicrobial treatments to control foodborne pathogens on almond kernels and whole black peppercorns. Food Microbiology. Volume 92. https://doi.org/10.1016/j.fm.2020.103576.Bacteriophages specific to Shiga toxin-producing Escherichia coli exist in goat feces and associated environments on an organic produce farm in Northern California, USA
                                                        

- (Peer Reviewed Journal)Lennon, M., Liao, Y., Salvador, A., Lauzon, C.R., Wu, V.C. 2020. Bacteriophages specific to Shiga toxin-producing Escherichia coli exist in goat feces and associated environments on an organic produce farm in Northern California, USA. PLoS One. 15(6):0234488. https://doi.org/10.1371/journal.pone.0234438.Preservation of tilapia (oreochromis aureus) fillet by isochoric (constant volume) freezing
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Sinrod, A., Williams, T.G., Wood, D.F., Chiou, B., Bridges, D.F., Wu, V.C., Lyu, C., Rubinsky, B., McHugh, T.H. 2020. Preservation of tilapia (oreochromis aureus) fillet by isochoric (constant volume) freezing. Journal of Aquatic Food Product Technology. 29(7):629-640. https://doi.org/10.1080/10498850.2020.1785602.Is Shiga toxin-producing Escherichia coli O45 no longer a food safety threat? The danger is still out there
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Sun, X., Wu, V.C.H. 2020. Is Shiga toxin-producing Escherichia coli O45 no longer a food safety threat? The danger is still out there. Microorganisms. 8(5):782. https://doi.org/10.3390/microorganisms8050782.Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on non-host tomato environment revealed by transcriptional network modeling: implications to adaptation and selection
                                                        

- (Peer Reviewed Journal)Shu, X., Singh, M., Karampudi, N.B., Bridges, D.F., Kitazumi, A., Wu, V.C., De Los Reyes, B.G. 2020. Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on non-host tomato environment revealed by transcriptional network modeling: implications to adaptation and selection. Frontiers in Microbiology. 11:1122. https://doi.org/10.3389/fmicb.2020.01122.Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on non-host tomato environment revealed by transcriptional network modeling: implications to adaptation and selection
                                                        

- (Peer Reviewed Journal)Shu, X., Singh, M., Bhushana, N.B., Bridges, D.F., Kitazumi, A., Wu, V.C., De Los Reyes, B.G. 2020. Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on non-host tomato environment revealed by transcriptional network modeling: implications to adaptation and selection. Frontiers in Microbiology. 11:1122. https://doi.org/10.3389/fmicb.2020.01122.Integrity of the Escherichia coli O157:H7 cell wall and membranes after chlorine dioxide treatment
                                                        

- (Peer Reviewed Journal)Bridges, David F., Alison Lacombe, and Vivian C. H. Wu. (2020). "Integrity of the Escherichia coli O157:H7 Cell Wall and Membranes after Chlorine Dioxide Treatment". Frontiers in Microbiology 11:888. doi: 10.3389/fmicb.2020.00888Strain specific response of Escherichia coli biofilms to chlorine dioxide

- (Abstract Only)Characterization of three lytic bacteriophages as an antimicrobial agent for biocontrol of Shiga toxin-producing Escherichia coli O145

- (Abstract Only)A lytic bacteriophage isolated from non-animal origin has better biocontrol features than a bacteriophage isolated from bovine feces to control Shiga toxin-producing Escherichia coli O157:H7

- (Abstract Only)Is Shiga toxin-producing Escherichia coli O45 no longer a food safety threat? The danger is still out there

- (Abstract Only)Zhang, Y., Liao, Y., Salvador, A., Sun, X., Wu, V.C. 2020. Is Shiga toxin-producing Escherichia coli O45 no longer a food safety threat? The danger is still out there [abstract]. Meeting Abstract.Modeling the efficacy of gaseous chlorine dioxide against Listeria on apple surfaces

- (Abstract Only)Guan, J., Lacombe, A.C., Tang, J., Bridges, D.F., Rane, B., Sablani, S., Wu, V.C. 2020. Modeling the efficacy of gaseous chlorine dioxide against Listeria on apple surfaces [abstract]. Meeting Abstract.Investigating the whole-genome sequences of a new locus of enterocyte effacement-positive Shiga toxin-producing Escherichia coli O157:H7 strain isolated from river water
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Salvador, A., Sun, X., Wu, V.C. 2020. Investigating the whole-genome sequences of a new locus of enterocyte effacement-positive Shiga toxin-producing Escherichia coli O157:H7 strain isolated from river water. Microbiology Resource Announcements. 9(12):e00112-20. https://doi.org/10.1128/MRA.00112-20.Scale-up model of forced air integrated gaseous chlorine dioxide for the decontamination of lowbush blueberries
                                                        

- (Peer Reviewed Journal)Lacombe, A.C., Antosch, J.G., Wu, V.C.H. 2020. Scale-up model of forced air integrated gaseous chlorine dioxide for the decontamination of lowbush blueberries. Journal of Food Safety: e12.Genomic characterization and potential pathogenetic analysis of Shiga toxin-converting bacteriophages induced from Shiga toxin-producing Escherichia coli strains.

- (Abstract Only)Prediction, diversity, and genomic analysis of temperate phages induced from Shiga toxin-producing Escherichia coli strains
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Salvador, A., Sun, X., Wu, V.C. 2020. Prediction, diversity, and genomic analysis of temperate phages induced from Shiga toxin-producing Escherichia coli strains. Frontiers in Microbiology. 10:e3093. https://doi.org/10.3389/fmicb.2019.03093.Phage therapy for controlling Shiga toxin-producing Escherichia coli O103 using lytic bacteriophages

- (Abstract Only)Preservation of spinach by isochoric (constant volume) freezing
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Sinrod, A., Dao, L.T., Takeoka, G.R., Williams, T.G., Wood, D.F., Bridges, D.F., Powell-Palm, M., Ukpai, G., Chiou, B., Wu, V.C., Rubinsky, B., McHugh, T.H. 2019. Preservation of spinach by isochoric (constant volume) freezing. International Journal of Food Science and Technology. 55(5):2141–2151. https://doi.org/10.1111/ijfs.14463.Antimicrobial effects and membrane damage mechanism of blueberry(Vaccinium corymbosum L.) extract against Vibrio parahaemolyticus
                                                        

- (Peer Reviewed Journal)Sun, X., Hao, L., Xie, Q., Lan, W., Zhao, Y., Pan, Y., Wu, V.C. 2019. Antimicrobial effects and membrane damage mechanism of blueberry (Vaccinium corymbosum L.) extract against Vibrio parahaemolyticus. Food Control. 111:107020. https://doi.org/10.1016/j.foodcont.2019.107020.In-situ generation of chlorine dioxide for decontamination of whole cantaloupes and sprout seeds
                                                        

- (Peer Reviewed Journal)Tan, J., Hwang, C., Huang, L., Wu, V.C., Hsiap, H. 2020. In-situ generation of chlorine dioxide for decontamination of whole cantaloupes and sprout seeds. Journal of Food Protection. 83:287-284. https://doi.org/10.4315/0362-028X.JFP-19-434.Feasibility and efficacy of using gaseous chlorine dioxide generated by sodium chlorite-acid reaction for pilot-scale decontamination of foodborne pathogens on produce
                                                        

- (Peer Reviewed Journal)Chai, H., Hwang, C., Huang, L., Wu, V.C., Sheen, L. 2019. Feasibility and efficacy of using gaseous chlorine dioxide generated by sodium chlorite-acid reaction for pilot-scale decontamination of foodborne pathogens on produce. Food Control. 108:106839. https://doi.org/10.1016/j.foodcont.2019.106839.Complete genome sequence of a Shiga toxin-converting bacteriophage, Escherichia phage Lys12581Vzw, induced from an outbreak Shiga toxin-producing Escherichia coli strain
                                                        

- (Peer Reviewed Journal)Zhang, Y., Liao, Y., Salvador, A., Sun, X., Wu, V.C. 2019. Complete genome sequence of a Shiga toxin-converting bacteriophage, Escherichia phage Lys12581Vzw, induced from an outbreak Shiga toxin-producing Escherichia coli strain. Microbiology Resource Announcements. 8:e00793-19. https://doi.org/10.1128/MRA.00793-19.Complete genome sequence of Escherichia coli phage vB_EcoM Sa157lw, isolated from surface water collected in Salinas, California
                                                        

- (Peer Reviewed Journal)Liu, F., Liao, Y., Li, R.W., Wu, V.C. 2019. Complete genome sequence of Escherichia coli phage vB_EcoM Sa157lw, isolated from surface water collected in Salinas, California. Microbiology Resource Announcements. 8:e00718-19. https://doi.org/10.1128/MRA.00718-19.Genome sequence of a T4-like phage, Escherichia phage vB_EcoM-Sa45lw, infecting Shiga toxin-producing Escherichia coli strains
                                                        

- (Peer Reviewed Journal)Liao, Y., Zhang, Y., Salvador, A., Wu, V.C. 2019. Genome sequence of a T4-like phage, Escherichia phage vB_EcoM-Sa45lw, infecting Shiga toxin-producing Escherichia coli strains. Microbiology Resource Announcements. 8:e00804-19. https://doi.org/10.1128/MRA.00804-19.Malvidin 3-glucoside modulated gut microbial dysbiosis and global metabolome disrupted in a murine colitis model induced by dextran sulfate sodium
                                                        

- (Peer Reviewed Journal)Liu, F., Wang, T.T., Tang, Q., Xue, C., Li, R.W., Wu, V.C. 2019. Malvidin 3-glucoside modulated gut microbial dysbiosis and global metabolome disrupted in a murine colitis model induced by dextran sulfate sodium. Molecular Nutrition and Food Research. 1900455:1-14. https://doi.org/10.1002/mnfr.201900455.Characterization of a lytic bacteriophage as an antimicrobial agent for biocontrol of Shiga toxin-producing Escherichia coli O145 strains
                                                        

- (Peer Reviewed Journal)Liao, Y., Salvador, A., Harden, L.A., Liu, F., Lavenburg, V.M., Li, R.W., Wu, V.C. 2019. Characterization of a lytic bacteriophage as an antimicrobial agent for biocontrol of Shiga toxin-producing Escherichia coli O145 strains. Antibiotics. 8(2):74. https://doi.org/10.3390/antibiotics8020074.Diverse Shiga toxin-producing Escherichia coli-specific bacteriophages exist in goat feces and the surrounding environments on an organic, produce-growing farm in Northern California, USA

- (Abstract Only)The Prevalence of Bacteriophages Lytic against Shiga Toxin-Producing Escherichia coli (STEC) and its Correlation with STEC Bacterial Hosts in an Organic Farm

- (Abstract Only)Simultaneous colorimetric detection of a variety of Salmonella spp. in food and environmental samples by optical biosensing using oligonucleotide-gold nanoparticles
                                                        

- (Peer Reviewed Journal)Quintela, I.A., De Los Reyes, B.G., Lin, C., Wu, V.C. 2019. Simultaneous colorimetric detection of a variety of Salmonella spp. in food and environmental samples by optical biosensing using oligonucleotide-gold nanoparticles. Frontiers in Microbiology. 10:1138. https://doi.org/10.3389/fmicb.2019.01138.Implementation of Fluorescent Assays to Measure Membrane Damage to Escherichia coli O157:H7 after Exposure to Chlorine Dioxide

- (Abstract Only)Identifying nonpathogenic Salmonella surrogates for industrial scale treatment of almonds using gaseous chlorine dioxide

- (Abstract Only)Identification of Nonpathogenic Surrogate Bacteria Applicable for Industrial-Scale Gaseous Chlorine Dioxide Treatment on Baby Carrots

- (Abstract Only)Synergistic effect of back-to-back treatment with two different low-dosage antimicrobial washes in combination with frozen storage increases Salmonella Typhimurium and Listeria monocytogenes reduction on wild blueberries
                                                        

- (Peer Reviewed Journal)Tadepalli, S., Bridges, D.F., Anderson, R., Zhang, R., Wu, V.C. 2019. Synergistic effect of back-to-back treatment with two different low-dosage antimicrobial washes in combination with frozen storage increases Salmonella Typhimurium and Listeria monocytogenes reduction on wild blueberries. Postharvest Biology and Technology. 102: 87-93. https://doi.org/10.1016/j.foodcont.2019.03.013.Discovery of novel shiga toxin-producing Escherichia coli (STEC)- specific bacteriophages from non-fecal composts using genomic characterization
                                                        

- (Peer Reviewed Journal)Liao, Y., Sun, X., Quintela, I.A., Bridges, D.F., Liu, F., Zhang, Y., Salvador, A., Wu, V.C. 2019. Discovery of novel shiga toxin-producing Escherichia coli (STEC)- specific bacteriophages from non-fecal composts using genomic characterization. Frontiers in Microbiology. 10:627. https://doi.org/10.3389/fmicb.2019.00627.Genomic Characterization of a T4-Like Bacteriophage Isolated from Surface Water in a Produce-Growing Area in Salinas, California as a Potential Biocontrol Agent for Shiga Toxin-Producing Escherichia coli

- (Abstract Only)Characterization of a Lytic Bacteriophage as an Antimicrobial Agent for Biocontrol of Shiga Toxin-Producing Escherichia coli O145 Strains

- (Abstract Only)Complete genome sequence of a lytic T7-like phage, Escherichia phage vB_EcoP-Ro45lw, isolated from non-fecal compost samples
                                                        

- (Peer Reviewed Journal)Liao, Y., Liu, F., Wu, V.C. 2019. Complete genome sequence of a lytic T7-like phage, Escherichia phage vB_EcoP-Ro45lw, isolated from non-fecal compost samples. Microbiology Resource Announcements. 8:e00036-19. https://doi.org/10.1128/MRA.00036-19.Effects of lyophilization on the stability of bacteriophages against different serogroups of Shiga toxin-producing Escherichia coli

- (Abstract Only)Prediction, diversity, and genomic analysis of temperate phages induced from Shiga toxin-producing Escherichia coli

- (Abstract Only)Reduction of Listeria monocytogenes and Salmonella Typhimurium on blueberries through brief-exposure to antimicrobial solutions coupled with freezing
                                                        

- (Peer Reviewed Journal)Bridges, D.F., Tadepalli, S., Anderson, R., Zhang, R., Wu, V.C. 2019. Reduction of Listeria monocytogenes and Salmonella Typhimurium on blueberries through brief-exposure to antimicrobial solutions coupled with freezing. Journal of Food Protection. 82(6):926-930. https://doi.org/10.4315/0362-028X.JFP-18-433.Kinetic analysis and dynamic prediction of growth of Vibrio parahaemolyticus in raw white shrimp at refrigerated and abuse temperature
                                                        

- (Peer Reviewed Journal)Chen, Y., Hwang, C., Wu, V.C., Huang, L., Hsiao, H. 2019. Kinetic analysis and dynamic prediction of growth of Vibrio parahaemolyticus in raw white shrimp at refrigerated and abuse temperature. Food Control. 100:204-211. https://doi.org/10.1016/j.foodcont.2019.01.013.Preservation of sweet cherry by isochoric (constant volume) freezing
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Sinrod, A., Powell-Palm, M., Dao, L.T., Takeoka, G.R., Williams, T.G., Wood, D.F., Ukpai, G., Aruda, J., Bridges, D.F., Wu, V.C., Rubinsky, B., McHugh, T.H. 2018. Preservation of sweet cherry by isochoric (constant volume) freezing. Innovative Food Science and Emerging Technologies. 52:108-115. https://doi.org/10.1016/j.ifset.2018.10.016.Preservation of sweet cherry by isochoric (constant volume) freezing
                                                        

- (Peer Reviewed Journal)Bilbao-Sainz, C., Sinrod, A., Powell-Palm, M., Dao, L.T., Takeoka, G.R., Williams, T.G., Wood, D.F., Ukpai, G., Aruda, J., Bridges, D.F., Wu, V.C., Rubinsky, B., McHugh, T.H. 2018. Preservation of sweet cherry by isochoric (constant volume) freezing. Innovative Food Science and Emerging Technologies. 52:108-115. https://doi.org/10.1016/j.ifset.2018.10.016.Complete genome sequence of Escherichia Phage vB_EcoM-Pr121LW isolated from soil in an organic farm
                                                        

- (Peer Reviewed Journal)Liao, Y., Liu, F., Wu, V.C. 2018. Complete genome sequence of Escherichia Phage vB_EcoM-Pr121LW isolated from soil in an organic farm. Microbiology Resource Announcements. 7:e01236-18. https://doi.org/10.1128/MRA.01236-18.Gaseous chlorine dioxide maintained the sensory and nutritional zuality of grape tomatoes and reduced populations of salmonella enterica serovar typhimurium
                                                        

- (Peer Reviewed Journal)Wang, L., Sokorai, K.J., Wu, V.C., Fan, X. 2018. Gaseous chlorine dioxide maintained the sensory and nutritional zuality of grape tomatoes and reduced populations of salmonella enterica serovar typhimurium. Food Control. 96:299-309. https://doi.org/10.1016/j.foodcont.2018.09.023.Antibacterial effect and mechanism of anthocyanin rich Chinese wild blueberry extract on various foodborne pathogens
                                                        

- (Peer Reviewed Journal)Sun, X., Zhou, T., Wei, C., Lan, W., Zhao, Y., Pan, Y., Wu, V.C. 2018. Antibacterial effect and mechanism of anthocyanin rich Chinese wild blueberry extract on various foodborne pathogens. Food Control. 94:155-161. https://doi.org/10.1016/j.foodcont.2018.07.012.Gaseous chlorine dioxide for post-harvest treatment of produce

- (Book / Chapter)Bridges, D.F., Wu, V.C. 2018. Gaseous chlorine dioxide for post-harvest treatment of produce. Book Chapter. Editor: M.W. Siddiqui. Elsevier Ltd, Academic Press, Oxford, GB. Ch. 13. pp 243-252.Complete genome sequence of Escherichia coli Phage vB_EcoS Sa179lw isolated from surface water in a produce-growing area in northern california
                                                        

- (Peer Reviewed Journal)Liao, Y., Liu, F., Sun, X., Li, R.W., Wu, V.C. 2018. Complete genome sequence of Escherichia coli Phage vB_EcoS Sa179lw isolated from surface water in a produce-growing area in northern California. Genome Announcements. 6(27):e00337-18. https://doi.org/10.1128/genomeA.00337-18.The effectiveness of closed-circulation gaseous chlorine dioxide or ozone treatment against bacterial pathogens on produce food control
                                                        

- (Peer Reviewed Journal)Bridges, D.F., Rane, B., Wu, V.C. 2018. The effectiveness of closed-circulation gaseous chlorine dioxide or ozone treatment against bacterial pathogens on produce food control. Food Control. 91(2018):261-267. https://doi.org/10.1016/j.foodcont.2018.04.004.Antimicrobial carvacrol in solution blow-spun fish-skin gelatin nanofibers
                                                        

- (Peer Reviewed Journal)Liu, F., Saricaoglu, F., Avena Bustillos, R.D., Bridges, D.F., Takeoka, G.R., Wu, V.C., Chiou, B., Wood, D.F., Mchugh, T.H., Zhong, F. 2018. Antimicrobial carvacrol in solution blow-spun fish-skin gelatin nanofibers. Journal of Food Science. 83(4):984-991. https://doi.org/10.1111/1750-3841.14076.Isolation of bacteriophages against non-O157 and O157 Shiga toxin-producing Escherichia coli (STEC) from composting of non-fecal materials and the potential impact on produce safety

- (Abstract Only)Prevalence and molecular typing of Vibrio parahaemolyticus isolated from seafood in Shanghai using multilocus sequence typing (MLST)

- (Abstract Only)Characterization of free lytic bacteriophages isolated from compost against O145 Shiga toxin-producing Escherichia coli (STEC) as a potential biocontrol agent

- (Abstract Only)Identification of novel bacteriophage peptides using a combination of gene sequence LC-MS-MS analysis and BLASTP

- (Abstract Only)Effectiveness of different antimicrobial washes combined with
freezing against Escherichia coli O157:H7, Salmonella Typhimurium,
and Listeria monocytogenes inoculated on blueberries
                                                        

- (Peer Reviewed Journal)Tadepalli, S., Bridges, D.F., Driver, R., Wu, V.C. 2018. Effectiveness of different antimicrobial washes combined with freezing against Escherichia coli O157:H7, Salmonella Typhimurium, and Listeria monocytogenes inoculated on blueberries. Food Microbiology. 74:34-39. https://doi.org/10.1016/j.fm.2018.02.018.Preparation of fish skin gelatin-based nanofibers incorporating cinnamaldehyde by solution blow spinning
                                                        

- (Peer Reviewed Journal)Liu, F., Saricaoglu, F., Avena-Bustillos, R.D., Bridges, D.F., Takeoka, G.R., Wu, V.C., Chiou, B., Wood, D.F., McHugh, T.H., Zhong, F. 2018. Preparation of fish skin gelatin-based nanofibers incorporating cinnamaldehyde by solution blow spinning. International Journal of Molecular Sciences. 19(2):618. https://doi.org/10.3390/ijms19020618Investigation of prevalence of free Shiga toxin-producing Escherichia coli (STEC)-specific bacteriophages and the correlation with STEC bacterial hosts in produce-growing area in Salinas, California
                                                        

- (Peer Reviewed Journal)Liao, Y., Quintela, I., Nguyen, K.M., Salvador, A., Cooley, M.B., Wu, V.C. 2018. Investigation of prevalence of free Shiga toxin-producing Escherichia coli (STEC)-specific bacteriophages and the correlation with STEC bacterial hosts in produce-growing area in Salinas, California. PLoS One. 13(1):e0190534. https://doi.org/10.1371/journal.pone.0190534.The risk of Vibrio parahaemolyticus infections associated with consumption of raw oysters as affected by processing and distribution conditions in Taiwan

- (Peer Reviewed Journal)Huang, Y., Hwang, C., Huang, L., Wu, V.C., Hsiao, H. 2017. The risk of Vibrio parahaemolyticus infections associated with consumption of raw oysters as affected by processing and distribution conditions in Taiwan. Food Control. 86:101-109.Inhibition of Tulane Virus replication via exposure to lowbush blueberry (Vaccinium angustifolium) fractional components

- (Peer Reviewed Journal)Bridges, D., Beard, A., Lacombe, A., Valentine, D.C., Tadepalli, S., Wu, V.C. 2017. Inhibition of Tulane Virus replication via exposure to lowbush blueberry (Vaccinium angustifolium) fractional components. Journal of Berry Research. 7(4):281-289. doi:10.3233/JBR-170164.Biotinylation of environmentally isolated Shiga toxin-producing Escherichia coli (STEC) – specific bacteriophages for biosensor and biocontrol applications

- (Abstract Only)Disruption the Outer Membrane of Enteropathogenic and Enterotoxigenic Escherichia coli using Proanthocyanidins

- (Abstract Only)Prevalence and Molecular Typing of Vibrio parahaemolyticus (tdh+) isolated from seafood using PCR-based methods

- (Abstract Only)Investigation of environmental factors on the prevalence of free bacteriophages against Shiga toxin-producing Escherichia coli strains in produce pre-harvest environment in Salinas, California

- (Abstract Only)Antibacterial characteristics of anthocyanins extracted from wild blueberries against foodborne pathogens

- (Abstract Only)Investigation of environmental factors on the prevalence of free bacteriophages against Shiga toxin-producing Escherichia coli strains in produce pre-harvest environment in Salinas, California

- (Proceedings)Liao, Y., Quintela, I., Nguyen, K.M., Salvador, A., Cooley, M.B., Wu, V.C. 2017. Investigation of environmental factors on the prevalence of free bacteriophages against Shiga toxin-producing Escherichia coli strains in produce pre-harvest environment in Salinas, California. Meeting Proceedings. 2017 USDA-ARS/FSIS Annual Food Safety Meeting. NCTC, Shepherdstown, WV. Section Z, P13.Isolation and characterization of bacteriophages as potential agents against Shiga toxin – producing Escherichia coli (STEC) strains

- (Proceedings)Quintela, I.A., Liao, Y., Valentine, D., Zhang, R., Anderson, G., Delos Reyes, B.G., Nguyen, K.M., Wu, V.C. 2017. Isolation and characterization of bacteriophages as potential agents against Shiga toxin – producing Escherichia coli (STEC) strains. Meeting Proceedings. . 2017 USDA-ARS/FSIS Annual Food Safety Meeting. NCTC, Shepherdstown, WV. Section Z, P12.Overcoming the challenges of safely quantifying and distinguishing among Shiga toxins in complex media and human serum

- (Abstract Only)Silva, C.J., Erickson-Beltran, M.L., Skinner, C.B., Patfield, S.A., He, X., Wu, V.C. 2017. Overcoming the challenges of safely quantifying and distinguishing among Shiga toxins in complex media and human serum. Meeting Abstract. Poster. ARS-FSIS 2017 meeting.Salmonella spp. dynamics in wild blueberry, Vaccinium angustifolium Aiton

- (Peer Reviewed Journal)Wu, V.C., Drummond, F., Tadepalli, S., Camire, M., Davis-Dentici, K., Bushway, A., Yarborough, D.E. 2017. Salmonella spp. dynamics in wild blueberry, Vaccinium angustifolium Aiton. World Journal of Microbiology. 4(1):64-71.Simultaneous direct detection of Shiga-toxin producing Escherichia coli (STEC) strains by gold nanoparticle optical sensing

- (Abstract Only)The Potential of Berries to Serve as Selective Inhibitors of Pathogens and Promoters of Beneficial Microorganisms

- (Review Article)Lacombe, A., Wu, V.C. 2017. The Potential of Berries to Serve as Selective Inhibitors of Pathogens and Promoters of Beneficial Microorganisms. Food Quality and Safety. 1(1):3-12. doi:10.1093/fqs/fyx001.In-situ generation of chlorine dioxide for surface decontamination of produce

- (Peer Reviewed Journal)Hwang, C., Huang, L., Wu, V.C. 2017. In-situ generation of chlorine dioxide for surface decontamination of produce. Journal of Food Protection. 80(4):567-572.Inactivation of Toxoplasma gondii on blueberries using low dose irradiation without affecting quality

- (Peer Reviewed Journal)Lacombe, A.C., Beard, A., Hwang, C., Hill, D., Fan, X., Huang, L., Yoo, B.K., Niemira, B.A., Gurtler, J., Wu, V.C. 2016. Inactivation of Toxoplasma gondii on blueberries using low dose irradiation without affecting quality. Food Control. 73(2017):981-985.Detecting and discriminating among Shiga toxins

- (Abstract Only)Silva, C.J., Erickson-Beltran, M.L., Skinner, C.B., Patfield, S.A., He, X., Wu, V.C. 2016. Detecting and discriminating among Shiga toxins. doi: 10.1021/acs.jafc.6b00379.Safe, rapid, and sensitive method of quantitating and distinguishing among Shiga toxins in complex media and human serum

- (Abstract Only)Wu, V.C., Silva, C.J., Erickson-Beltran, M.L., Skinner, C.B., Patfield, S.A., He, X. 2016. Safe, rapid, and sensitive method of quantitating and distinguishing among Shiga toxins in complex media and human serum. ARS Food Safety and Inspection Service Research Workshop. ARS-FSIS.
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