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 Crop Germplasm Research: College Station, TX
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ARS Home Plains Area College Station, Texas Southern Plains Agricultural Research Center Crop Germplasm Research People & Locations







Joshua A Udall

(Josh)
                        Crop Germplasm Research

                        




                        
                        Research Geneticist (Plants)
                        Phone: (979) 260-9311
                        
                        
                        Fax: (979) 260-9333(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)
                            ProjectsAdvancement of Cotton Genetic Resources Through Use of a Costa Rican Counter Season Nursery
                                                    Cooperative Agreement
                                                                    (A)Accession Number: 444338Management of Cotton Genetic Resources and Genetic Improvement of Cotton
                                                    In-House Appropriated
                                                                    (D)Accession Number: 444798Pecan Breeding and Management of the National Collection of Carya Genetic Resources
                                                    In-House Appropriated
                                                                    (D)Accession Number: 443446Developing Genome Editing Resources for Modifying Genes to Improve Priority Traits in Cotton
                                                    Non-Funded Cooperative Agreement
                                                                    (N)Accession Number: 436913Exploiting Genetic Variation of Australian and African Diploid Accessions for American Tetraploid Cotton
                                                    Non-Funded Cooperative Agreement
                                                                    (N)Accession Number: 440883Exploring the Genetics of Drought Resistance with Field-based Phenomics and Biophysical Process-based Modeling
                                                    Reimbursable Cooperative Agreement
                                                                    (R)Accession Number: 441631Renewal and Advance of Cotton Genetic Resources Through Use of a Costa Rican Counter Season Nursery
                                                    Non-Assistance Cooperative Agreement
                                                                    (S)Accession Number: 442355Developing Pecan Database Resources
                                                    Non-Assistance Cooperative Agreement
                                                                    (S)Accession Number: 440120Continued Development of a Publicly Accessible Comprehensive Cotton Database
                                                    Non-Assistance Cooperative Agreement
                                                                    (S)Accession Number: 440329Continued Development of a Publicly Accessible Comprehensive Cotton Database
                                                    Non-Assistance Cooperative Agreement
                                                                    (S)Accession Number: 445565**Publications**
                                                (Clicking on the reprint icon
                                                    Reprint Icon
                                                    will take you to the publication reprint.)Comparative analysis of genome sequences of the two cultivated tetraploid cottons, Gossypium hirsutum (L. )and G. barbadense (L.)
                                                        

- (Peer Reviewed Journal)Meng, Q., Gu, J., Xu, Z., Zhang, J., Tang, J., Wang, A., Wang, P., Liu, Z., Rong, Y., Xie, P., Hui, L., Udall, J.A., Grover, C.E., Wendell, J.C. 2023. Comparative analysis of genome sequences of the two cultivated tetraploid cottons, Gossypium hirsutum (L.) and G. barbadense (L.). Industrial Crops and Products. Article e116471. https://doi.org/10.1016/j.indcrop.2023.116471.Dual domestication, diversity, and differential introgression in Old World cotton diploids
                                                        

- (Peer Reviewed Journal)Grover, C.E., Arick II, M.A., Thrash, A., Sharbrough, J., Hu, G., Yuan, D., Miller, E.R., Ramaraj, T., Peterson, D.G., Udall, J.A., Wendell, J.F. 2022. Dual domestication, diversity, and differential introgression in Old World cotton diploids. Genome Biology and Evolution. 14(12). https://doi.org/10.1093/gbe/evac170.Homology-based identification of candidate genes for male sterility editing in Upland cotton (Gossypium hirsutum L.)
                                                        

- (Peer Reviewed Journal)Morales, K., Bridgeland, A.H., Kater, H., Udall, J.A., Yu, J., Thompson, M. 2022. Homology-based identification of candidate genes for male sterility editing in Upland cotton (Gossypium hirsutum L.). Frontiers in Plant Science. Article e2022.1006264. https://doi.org/10.3389/fpls.2022.1006264.The Gossypium herbaceum L. Wagad genome as a resource for understanding cotton domestication
                                                        

- (Peer Reviewed Journal)Ramaraj, T., Grover, C.E., Azalea, M., Arick II, M.A., Jareczek, J., Leach, A., Peterson, D., Wendel, J.F., Udall, J.A. 2022. The Gossypium herbaceum L. Wagad genome as a resource for understanding cotton domestication. G3, Genes/Genomes/Genetics. 13(2). https://doi.org/10.1093/g3journal/jkac308.CottonGen: The community database for cotton genomics, genetics, and breeding research
                                                        

- (Peer Reviewed Journal)Yu, J., Jung, S., Cheng, C., Lee, T., Zheng, P., Buble, K., Crabb, J., Humann, J., Hough, H., Jones, D., Campbell, B.T., Udall, J.A., Main, D. 2021. CottonGen: The community database for cotton genomics, genetics, and breeding research. Plants. 10(12):2805. https://doi.org/10.3390/plants10122805.The Gossypium anomalum genome as a resource for cotton improvement and evolutionary analysis of hybrid incompatibility
                                                        

- (Peer Reviewed Journal)Grover, C.E., Yuan, D., Arick, M.A., Miller, E.R., Hu, G., Peterson, D.G., Wendel, J.F., Udall, J.A. 2021. The Gossypium anomalum genome as a resource for cotton improvement and evolutionary analysis of hybrid incompatibility. Genes, Genomes, Genetics. Article jkab319. https://doi.org/10.1093/g3journal/jkab319.CottonGen: the community database for cotton genomics, genetics, and breeding research
                                                        

- (Peer Reviewed Journal)Yu, J., Jung, S., Cheng, C., Lee, T., Zheng, P., Buble, K., Crabb, J., Humann, J., Hough, H., Jones, D., Campbell, B.T., Udall, J.A., Main, D. 2021. CottonGen: the community database for cotton genomics, genetics, and breeding research . Plants. 10(12):2805. https://doi.org/10.3390/plants10122805.Genome assembly of two nematode-resistant cotton lines (Gossypium hirsutum L.)
                                                        

- (Peer Reviewed Journal)Perkin, L.C., Bell, A.A., Hinze, L.L., Suh, C.P., Arick II, M.A., Peterson, D., Udall, J.A. 2021. Genome assembly of two nematode-resistant cotton lines (Gossypium hirsutum L.). G3, Genes/Genomes/Genetics. 11(11). Article jkab276. https://doi.org/10.1093/g3journal/jkab276.The Gossypium stocksii genome as a novel resource for cotton improvement
                                                        

- (Peer Reviewed Journal)Grover, C.E., Yuan, D., Arick, M.A., Miller, E.R., Hu, G., Peterson, D.G., Wendel, J.F., Udall, J.A. 2021. The Gossypium stocksii genome as a novel resource for cotton improvement. G3, Genes/Genomes/Genetics. 11(7). Article jkab125. https://doi.org/10.1093/g3journal/jkab125.Parallel and intertwining threads of domestication in allopolyploid cotton
                                                        

- (Peer Reviewed Journal)Yuan, D., Grover, C.E., Hu, G., Pan, M., Miller, E., Conover, J.L., Hunt, S., Udall, J.A., Wendel, J.F. 2021. Parallel and intertwining threads of domestication in allopolyploid cotton. Advanced Science. Article 2003634. https://doi.org/10.1002/advs.202003634.Status of the National Cotton Germplasm Collection

- (Abstract Only)The Gossypium longicalyx genome as a resource for cotton breeding and evolution
                                                        

- (Peer Reviewed Journal)Grover, C.E., Pan, M., Yuan, D., Arick, M.A., Hu, G., Brase, L., Stelly, D.M., Lu, Z., Schmitz, R.J., Peterson, D.G., Wendel, J.F., Udall, J.A. 2020. The Gossypium longicalyx genome as a resource for cotton breeding and evolution. Genes, Genomes, Genetics. 10:1457-1467. https://doi.org/10.1534/g3.120.401050.Exploiting genetic variation of Gossypium gene pools for cotton improvement

- (Abstract Only)Yu, J., Frelichowski, J.E., Hinze, L.L., Udall, J.A. 2020. Exploiting genetic variation of Gossypium gene pools for cotton improvement [abstract]. Plant and Animal Genome Conference, January 11-15, 2020, San Diego, California. W820.Genetic analysis of the transition from wild to domesticated cotton (G. hirsutum L.)
                                                        

- (Peer Reviewed Journal)Grover, C.E., Yoo, M., Lin, M., Murphy, M.D., Harker, D.B., Byers, R.L., Lipka, A.E., Hu, G., Yuan, D., Conover, J., Udall, J.A., Paterson, A.H., Gore, M.A., Wendel, J. 2020. Genetic analysis of the transition from wild to domesticated cotton (G. hirsutum L.). G3, Genes/Genomes/Genetics. 10(2):731-754. https://doi.org/10.1534/g3.119.400909.The genome sequence of Gossypioides kirkii illustrates a descending dysploidy in plants
                                                        

- (Peer Reviewed Journal)Udall, J.A., Long, E., Ramaraj, T., Conover, J.L., Yuan, D., Grover, C.E., Gong, L., Arick, M.A., Masonbrink, R.E., Peterson, D.G., Wendel, J.F. 2019. The genome sequence of Gossypioides kirkii illustrates a descending dysploidy in plants. Frontiers in Plant Science. 10:1541. https://doi.org/10.3389/fpls.2019.01541.De novo genome assemblies of Gossypium raimondii and G. turneri
                                                        

- (Peer Reviewed Journal)Udall, J.A., Long, E., Hanson, C., Yuan, D., Ramaraj, T., Conover, J.L., Gong, L., Arick, M.A., Grover, C.E., Peterson, D.G., Wendel, J.F. 2019. De novo genome assemblies of Gossypium raimondii and G. turneri. G3, Genes/Genomes/Genetics. 9(10):3079-3085. https://doi.org/10.1534/g3.119.400392.The first genetic map for yellow lupin enables genetic dissection of adaptation traits in an orphan grain legume crop
                                                        

- (Peer Reviewed Journal)Munir Iqbal, M., Huynh, M., Udall, J.A., Kilian, A., Adhikari, K.N., Berger, J.D., Erskine, W., Nelson, M.N. 2019. The first genetic map for yellow lupin enables genetic dissection of adaptation traits in an orphan grain legume crop. BioMed Central (BMC) Genetics. 20:68. https://doi.org/10.1186/s12863-019-0767-3.


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