# Patent

## Title
Antimicrobial compounds

## Abstract

The present invention relates to certain tetramic acid derivatives that are suitable for use in the preparation and development of antimicrobial (e.g. antibacterial or antifungal) compositions. The present invention also relates to the use of such compounds as antimicrobial (e.g. antibacterial or antifungal agents) and, in particular, as topical antibacterial or antifungal agents.

## Background
The present invention relates to certain tetramic acid derivatives that are suitable for use in the preparation and development of antimicrobial (e.g. antibacterial or antifungal) compositions. The present invention also relates to the use of such compounds as antimicrobial (e.g. antibacterial or antifungal agents) and, in particular, as topical antibacterial or antifungal agents.
As the use of antibiotics becomes increasingly widespread, antibiotic-resistant strains of bacteria have evolved. As a result, there is a growing need for new antibiotics to combat the continuous emergence of such resistant strains.
Natural products containing a tetramate nucleus are known and some of these compounds are known to exhibit antibacterial activity. For example, streptolydigin and tirandamycin are known to have antibacterial activity against Gram-positive and Gram-negative bacteria, while reutericyclin (Formula III below) is bacteriostatic or bactericidal to Gram-positive bacteria.




Magnesidin A (Formula IV below) is also known to have antibacterial activity




Attempts have been made to use such natural product as starting points to identify synthetic compound libraries of antibacterial agents. Attempts have also been made to use the tetramate nucleus as a scaffold for designing compounds with antibacterial activity. Examples of antibacterial compounds that are based on a tetramate nucleus are described in WO 2008/014311 and EP 1116715. In particular, EP 1116715 specifically describes reutericyclin both in racemic and (R) form.
It is among the objects of embodiments of the present invention to provide alternative compounds that can be used for the preparation and/or development of antibacterial compositions, and, in particular, antibacterial compositions for topical use.
SUMMARY OF THE INVENTION
In one aspect of the present invention, there is provided a compound as defined herein.
In another aspect, the present invention provides an antimicrobial composition comprising a compound as defined herein. Preferably, the composition is a topical composition.
In another aspect, the present invention provides the use of a compound as defined herein as an antimicrobial agent, such as a preservative.
In another aspect of the present invention, there is provided a compound as defined herein for use as a medicament for treating a topical microbial infection, such as a bacterial or fungal infection.
The present invention further provides a method of synthesising a compound as defined herein.
The present invention also provides a method of inhibiting bacterial RNA polymerase and/or undecaprenyl pyrophosphate synthase, which method comprising contacting a cell with an effective amount of a compound as defined herein.
In another aspect, the present invention provides a compound obtainable by, or obtained by, or directly obtained by a method of synthesis as defined herein.
Preferred, suitable, and optional features of any one particular aspect of the present invention are also preferred, suitable, and optional features of any other aspect.


DETAILED DESCRIPTION OF THE INVENTION
Definitions
Unless otherwise stated, the following terms used in the specification and claims have the following meanings set out below.
In this specification, the term “hydrocarbyl” refers to any substituent that consists of carbon and hydrogen atoms. The hydrocarbyl group may be saturated or unsaturated, or aromatic or aliphatic. The hydrocarbyl group may also be cyclic, straight chain or branched. Cyclic hydrocarbyl groups include monocyclic and polycyclic groups. Polycyclic groups include fused ring and bridged ring systems.
In this specification the term “alkyl” includes cyclic and non-cyclic, such as straight and branched chain alkyl groups.
The term “alkenyl” refers to hydrocarbyl groups containing at least one C═C bond. Alkenyl groups include cyclic, straight chain and branched alkenyl groups.
The term “aryl” refers to substituents comprising a cyclic, e.g. monocyclic or polycyclic aromatic ring having at least 5 carbon atoms. The aryl group is preferably an aryl hydrocarbyl group. Examples of aryl groups include, but are not limited to, phenyl, biphenyl, naphthyl and the like. In one embodiment, the aryl group may include a linking group attached the cyclic or polycyclic aromatic ring. The linking group may be of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. For example, the aryl group may be —C6H5 or —CH2C6H5. Thus, if a particular substituent, such as a hydrocarbyl group, is substituted with an aryl group, the substitution may take place via the linking group.
The term “halo” refers to fluoro, chloro, bromo and iodo.
The term “haloalkyl” is used herein to refer to an alkyl group in which one or more hydrogen atoms have been replaced by halogen atoms. The term “trihaloalkyl” refers to alkyl groups in which three hydrogen atoms have been replaced by halogen atoms, such as fluoroatoms. An example of a trihaloalkyl is trifluoroalkyl, —CF3.
The term “heterocyclyl”, “heterocyclic” or “heterocycle” covers aromatic, non-aromatic, saturated or unsaturated monocyclic, fused, bridged, or spiro bicyclic heterocyclic ring system(s). Monocyclic heterocyclic rings contain from about 3 to 12 (suitably from 3 to 7) ring atoms, with from 1 to 5 (suitably 1, 2 or 3) heteroatoms selected from at least one of nitrogen, oxygen or sulphur in the ring. Bicyclic heterocycles contain from about 7 to about 17 ring atoms, suitably from 7 to 12 ring atoms. Bicyclic heterocyclic(s) rings may be fused, spiro, or bridged ring systems. Where the heterocycle comprises two or more ring structures, a heteroatom may be present in one or more of the rings. In one embodiment, the heterocycle group may include a linking group attached thereto. The linking group may be of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Thus, if a particular substituent, such as a hydrocarbyl or heterocyclic group, is substituted with another heterocyclic group, the substitution may occur via the linking group.
As the skilled person would appreciate, any heterocycle may be linked to another group via any suitable atom, such as via a carbon or nitrogen atom.
By “bridged ring systems” is meant ring systems in which two rings share more than two atoms, see for example Advanced Organic Chemistry, by Jerry March, 4th Edition, Wiley Interscience, pages 131-133, 1992.
As discussed above, the heterocyclic group may be an aromatic heterocyclic group (hereinafter a “heteroaryl” group). Examples of such heteroaryls include aromatic mono-, bi-, or polycyclic ring incorporating one or more (for example 1-4, particularly 1, 2 or 3) heteroatoms selected from nitrogen, oxygen or sulfur. Examples of heteroaryl groups are monocyclic and bicyclic groups containing from five to twelve ring members, and more usually from five to ten ring members. The heteroaryl group can be, for example, a 5- or 6-membered monocyclic ring or a 9- or 10-membered bicyclic ring, for example a bicyclic structure formed from fused five and six membered rings or two fused six membered rings.
By “bridged ring systems” is meant ring systems in which two rings share more than two atoms, see for example Advanced Organic Chemistry, by Jerry March, 4th Edition, Wiley Interscience, pages 131-133, 1992.
As discussed above, the heterocyclic group may be an aromatic heterocyclic group (hereinafter a “heteroaryl” group). Examples of such heteroaryls include aromatic mono-, bi-, or polycyclic ring incorporating one or more (for example 1-4, particularly 1, 2 or 3) heteroatoms selected from nitrogen, oxygen or sulfur. Examples of heteroaryl groups are monocyclic and bicyclic groups containing from five to twelve ring members, and more usually from five to ten ring members. The heteroaryl group can be, for example, a 5- or 6-membered monocyclic ring or a 9- or 10-membered bicyclic ring, for example a bicyclic structure formed from fused five and six membered rings or two fused six membered rings.
The term “optionally substituted” refers to either groups, structures, or molecules that are substituted and those that are not substituted.
Where optional substituents are chosen from “one or more” groups it is to be understood that this definition includes at least one of the substituents being chosen from one of the specified groups or two or more of the substituents being chosen from two or more of the specified groups. It is not necessary for all substituents to be chosen from one of the specified groups, although this may be preferred.
The phrase “compound of the invention” means those compounds which are disclosed herein, both generically and specifically. For the avoidance of doubt, the term “compound” covers the compound per se, as well as salts (including pharmaceutically acceptable salts) and solvates thereof.
It is to be appreciated that references to “treating” or “treatment” include prophylaxis as well as the alleviation of established symptoms of a condition. “Treating” or “treatment” of a state, disorder or condition therefore includes: (1) preventing or delaying the appearance of clinical symptoms of the state, disorder or condition developing in a human that may be afflicted with or predisposed to the state, disorder or condition but does not yet experience or display clinical or subclinical symptoms of the state, disorder or condition, (2) inhibiting the state, disorder or condition, i.e., arresting, reducing or delaying the development of the disease or a relapse thereof (in case of maintenance treatment) or at least one clinical or subclinical symptom thereof, or (3) relieving or attenuating the disease, i.e., causing regression of the state, disorder or condition or at least one of its clinical or subclinical symptoms.
A “therapeutically effective amount” means the amount of a compound that, when administered to a mammal for treating a disease, is sufficient to effect such treatment for the disease. The “therapeutically effective amount” will vary depending on the compound, the disease and its severity and the age, weight, etc., of the mammal to be treated.
Tetramic Acid Derivatives
In a first aspect, the present invention provides a compound of the Formula I or II below:




wherein

    x is 0 or 1,
    Y is OH or C1 to C15 alkyl,
    R4 is H or C1 to C6 alkyl,
    either
    R1 is a C1 to C15 hydrocarbyl optionally substituted with a heterocyclic group or an ether group, and
    R2 is H, ether, thioether or C1 to C8 alkyl, or
    R1 and R2 together form part of a 5-membered or 6-membered ring fused to the pyrrolidine/piperidine ring
    
        R3 and R5 are each independently selected from a group of the formula L1-L2-R6 or L2-L1-R6, where L1 is a linker of the formula —[CR8R9]n—, where n is an integer of from 0 to 12, and R8 and R9 are in each instance each independently selected from H or C1 to C2 alkyl, and
        where L2 is absent or a linker that is selected from O, S, SO, SO2, N(R′), C(O), C(O)O, [O(CH2)r]s, [(CH2)rO]s, OC(O), CH(OR′), C(O)N(R′), N(R′)C(O), N(R′)C(O)N(R′), SO2N(R′) or N(R′)SO2, where R′ and R′′ are each independently selected from hydrogen and a C1 to C2 alkyl, and where r is 1 or 2 and s is 1 to 4,
        where R6 is selected from OR11, a heterocyclic and C1 to C25 hydrocarbyl group, wherein R11 is a C1 to C6 alkyl, and wherein said heterocyclic and hydrocarbyl group is optionally substituted with at least one functional group selected from alkyl, alkenyl, aryl, halo, trihaloalkyl, alcohol, thio-alcohol, keto, S(O)R11, ester, thioester, ═O, ═S, alkanoyl, ether, thioether, amide, thioamide, urea, thiourea, amine and heterocyclic group,
        with the proviso that the compound is not a compound of the formula III or IV below:
    
    






wherein p is 2 or 4

When the compound is of Formula I and x=0, R3 is preferably not methyl when R2 is a C1 to C5 alkyl. When the compound is of Formula I and n=0, R3 is preferably not methyl. When the compound is of Formula I and n=0, R2 is may or may not be a C1 to C5 alkyl. In one embodiment, R1 is not CH═CHC7H15.
Where the compound is of Formula I and x=0, R3 may be a C3 to C7 alkyl, such as a C3H7 or C5H11. In this embodiment, R2 may be CH2CH(CH3)3 and R1 may be CH═CHC7H15.
The compounds of the present invention are useful in the development and/or manufacture of anti-microbial compositions, such as anti-bacterial or anti-fungal compositions. Without wishing to be bound by any theory, the antimicrobial activity is believed to be at least partially attributable to the tetramate nucleus and the substituent at the 3 position of the tetramate nucleus. The antimicrobial activity may also depend on the nature of the substituents at at least one of the R1, R2, R3, R4 and R5 positions. By varying at least one of these substituents, the antimicrobial activity of the compound may be optimised. Accordingly, the present invention provides the means for developing and optimising lead compounds for the synthesis of antimicrobial (e.g. antibacterial or antifungal) actives. In another embodiment, the present invention provides compounds for use as antimicrobial actives, and, in particular, antibacterial actives for topical use.
In one embodiment, R4 is H.
In another embodiment, R2 is selected from hydrogen, a C1 to C6 alkyl or a thioether group of the formula (CH2)qSR′, where q is 1 to 4 and R′ is a C1 to C4 alkyl group. Suitable alkyl groups include cyclic, straight chain or branched alkyl groups. Examples include methyl, ethyl, propyl (i-propyl or n-propyl) or butyl (n-butyl, t-butyl, s-butyl and i-butyl, preferably t-butyl). Branched alkyl groups, such as CH2CH(CH3)2 are preferred. Where R2 is a thioether group of the formula (CH2)qSR′, R′ is preferably a methyl group. An example of a suitable thioether is CH2CH2SCH3.
As noted above, R1 may be a C1 to C15 hydrocarbyl group. This may be saturated or unsaturated, or aromatic or aliphatic. The hydrocarbyl group may be cyclic, straight chain or branched. In one embodiment, R1 is an alkyl group. Suitable alkyl groups include straight chain alkyl groups, such as those of the formula CiH2i+1, where i is 1 to 10, preferably 3 to 6. Cyclic or branched alkyl groups may also be used. Such groups may also include hydrocarbyl linking groups, such as those of the formula  ̃[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. In one embodiment, R1 is an alkyl group selected from C3H7, C6H13 and CH2CH(CH3)CH2C(CH3)3.
In another embodiment, the hydrocarbyl group may be or include an aryl group. Suitable aryl groups may have 6 to 12 carbon atoms. A preferred example is phenyl. These groups may also include hydrocarbyl linking groups, such as those of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. The aryl group (e.g. phenyl) may optionally be substituted with a hydrocarbyl group, such as an alkyl group. Suitable alkyl groups include methyl groups. In one embodiment, C1 is a phenyl group or a phenyl group substituted with a methyl group.
In another embodiment, the hydrocarbyl may be or include an alkenyl group. Such groups may include 2 to 10 carbon atoms. Such alkenyl groups may also include hydrocarbyl linking groups, such as those of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. Where an alkenyl group is used, it may have a C═C bond at a position β to the C═O group. Preferably, the alkenyl group is of the formula CH═CHCiH2i+1, where i is an integer selected from 1 to 13. Specific examples of such groups include CH═CHC3H7 and CH═CHC7H15. The alkenyl group may be a cis- or trans-alkenyl and is preferably a trans-alkenyl group.
Where R1 is or includes a hydrocarbyl group, the hydrocarbyl group may optionally be substituted with a heterocyclic group. An example of such a group is a thiophenyl group. For example, R1 may be CH2C4H3S. Where R1 is or includes a hydrocarbyl group, the hydrocarbyl group may optionally be substituted with an ether group. Examples of suitable ether groups include those of the formula ORq, where q is an alkyl, such as a C1 to C6 alkyl (e.g. methyl or ethyl) or an aryl group, such as a phenyl group. In one embodiment, R1 is a phenyl group optionally substituted with an ether group, such as an OCH3 group.
In another embodiment, R1 and R2 form a 5- or 6-membered ring structure, for example, as shown below:




where x is 0 or 1, preferably 0. The 5- or 6-membered ring structure is preferably unsubstituted.

R3 and R5 are each a group of the formula L1-L2-R6 or L2-L1-R6, L1-L2-R6 being preferred. As noted above, L1 is a linker of the formula —[CR8R9]n—, where n is an integer of from 0 to 12, and R8 and R9 are each independently selected from H or C1 to C2 alkyl. Preferably, n is from 0 to 11, more preferably 0 to 6, even more preferably 0 to 4, for example, 0 or 1. Preferably, R8 and R9 are each independently selected from H or methyl. Where more than one —[CR8R9]— link is present (i.e. n is greater than 1), R8 may be the same or different in each instance of —[CR8R9]—. Similarly, R9 may be the same or different in each instance of —[CR8R9]—.
As noted above, L2 may be absent or a linker that is selected from O, S, SO, SO2, N(R′), C(O), C(O)O, OC(O), [O(CR′2)r]s, [(CR′2)rO]s CH(OR′), C(O)N(R′), N(R′)C(O), N(R′)C(O)N(R′), SO2N(R′) or N(R′)SO2 where R′ and R′′ are each independently selected from hydrogen and a C1 to C2 alkyl, and where r is 1 or 2 and s is 1 to 4. In one embodiment, L2 is absent. In another embodiment, L2 is selected from O, C(O)O, OC(O), C(O)N(R′) and N(R′)C(O).
As mentioned above, R6 is selected from OR11, heterocyclic and C1 to C25 hydrocarbyl group. Where R6 is OR11, R11 is a C1 to C6 alkyl, preferably a C1 to C4 alkyl group, such as methyl, ethyl, propyl (i-propyl or n-propyl) or butyl (n-butyl, t-butyl, s-butyl and i-butyl, preferably t-butyl).
R6 may be a heterocyclic group. Suitable heterocyclic groups include aromatic and non-aromatic, saturated and unsaturated, and monocyclic and polycyclic heterocycles. Such groups may contain one or more heteroatoms, such as O, N and S. Where two or more heteroatoms are present, these may be the same or different. Where polycyclic heterocycles are used, the heteroatom may be present in one or more (e.g. all) of the cyclic groups. The heterocyclic group preferably has 5 to 12 ring members, for example, 5, 6, 7, 8 or 9 ring members. Suitable heterocyclic groups include saturated heterocyclic groups comprising 1 or 2 heteroatoms selected from O, N and S, preferably O and N. Examples of such saturated heterocycles include tetrahydrofuranyl, oxanyl, pyrrolidinyl, piperidinyl, azepanyl, morpholinyl, dioxanyl and piperazinyl. Suitable heterocyclic groups also include saturated heterocyclic groups comprising 1 or 2 heteroatoms selected from O, N and S. Examples of such unsaturated heterocycles include furanyl, pyrrol, imidazolyl, pyrazolyl, thiazolyl, isothiazolyl, diazinyl. The heterocycles may be fused to another ring, such as a cyclohexyl ring or benzene ring. Examples of such fused heterocycles include indole, isoindole and benzothiazole. The heterocyclic group may or may be coupled to the acyl group, nitrogen of the enamine group, L1 or L2 via the heteroatom. Alternatively, the attachment may be via a C atom. In one embodiment, the heterocycle comprises a ring N atom, which is optionally protected with a protecting group, such as t-BOC (t-butoxycarbonyl).
R6 may be a C1 to C25 hydrocarbyl group. This may be saturated or unsaturated, or aromatic or aliphatic. The hydrocarbyl group may be cyclic, straight chain or branched. In one embodiment, R6 is an alkyl group. Suitable alkyl groups include straight chain alkyl groups, such as those of the formula CiH2i+1, where i is 1 to 22, preferably 6 to 19. Cyclic alkyl groups, including monocyclic, polycyclic and bridged cycloalkyls, may also be used. Suitable monocyclic cycloalkyl groups may comprise C3 to C6 cycloalkyl groups, such as cyclopropane, cyclobutane, cyclopentyl and cyclohexyl. Such groups may also include hydrocarbyl linking groups, such as those of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Suitable bridged cycloalkyls include adamantyl (e.g. 1-adamantyl), myrtanyl, norbornane and 6,6-dimethylbicyclo[3.1.1]heptan-2-yl)methyl. The bridged cycloalkyl substituent may be substituted, for example, with alkyl groups, such as methyl or ethyl groups, or alkanoyl group(s), such as acetyl. Such bridged cycloalkyl substituents may also include hydrocarbyl linking groups, such as those of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. In one embodiment, R6 is or comprises a norbornane group that is optionally substituted, for example, with an acetyl group specific example is 2-norbornaneacetyl.
In another embodiment, the hydrocarbyl group may be or include an aryl group. Suitable aryl groups may have 6 to 12 carbon atoms. A preferred example is phenyl. These groups may also include hydrocarbyl linking groups, such as those of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
In another embodiment, the hydrocarbyl may be or include an alkenyl group. Such groups may be derived from the alkyl groups defined above by replacing at least one C—C bond with a C═C bond. A specific example is 1-cyclohexene. Such alkenyl groups may also include hydrocarbyl linking groups, such as those of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
As mentioned above, the heterocyclic group or hydrocarbyl group may be substituted with at least one functional group selected from alkenyl, alkyl, aryl, halo, trihaloalkyl, alcohol, keto, thioketo, sulfonyl, thio-alcohol, ester, thioester, ether, thioether, amide, thioamide, urea, thiourea, ═O, ═S, sulfonyl and heterocyclic groups. These substituents, particularly, the aryl and heterocyclic groups may themselves be substituted further, for example, with alkenyl, alkyl, aryl, halo, trihaloalkyl, alcohol, keto, thioketo, sulfonyl, thio-alcohol, ester, thioester, ether, thioether, amide, thioamide, urea, thiourea, ═O, ═S, sulfonyl and heterocyclic groups, such as those described herein. Where the heterocyclic group or hydrocarbyl group is substituted, at least one substituent must be selected from alkenyl, alkyl, aryl, halo, trihaloalkyl, alcohol, keto, S(O)R13, sulfonyl, thio-alcohol, ester, thioester, ether, thioether, amide, thioamide, urea, thiourea, ═O, ═S, amine and heterocyclic groups. Where two or more substituents are present on the heterocyclic group or hydrocarbyl group, the second and subsequent substituent may also be selected from alkenyl, alkyl, aryl, halo, trihaloalkyl, alcohol, keto, S(O)R13, sulfonyl, thio-alcohol, ester, thioester, ether, thioether, amide, thioamide, urea, thiourea, ═O, ═S, alkanoyl, amine and heterocyclic groups.
The heterocyclic group or hydrocarbyl group may be substituted with any alkenyl group. Suitable alkenyl groups are those having at least one C═C bond. The C═C may be coupled directly to the heterocyclic group or hydrocarbyl group or via a linking group of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. The alkenyl group may have 2 to 20 carbon atoms, for example, 2 to 6 carbon atoms. The alkenyl group may be cyclic, straight chain or branched.
Where the substituent is an alkyl group, cyclic, straight chain and branched alkyl groups may be used. Suitable alkyl substituents may have 1 to 20 carbon atoms, for example, 1 to 6 carbon atoms. Preferred alkyl groups include methyl, ethyl, propyl (i-propyl or n-propyl) or butyl (n-butyl, t-butyl, s-butyl and i-butyl).
Where the substituent is an aryl group, the aryl group may be or include a hydrocarbyl aryl. Examples of aryl groups include, but are not limited to, phenyl, biphenyl, naphthyl and the like. Phenyl is preferred. In one embodiment, the aryl group may include a linking group attached the cyclic or polycyclic aromatic ring. The linking group may be of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. For example, the aryl group may be —C6H5 or —CH2C6H5. The aryl group may itself be substituted, for example, with alkyl, aryl, halo, trihaloalkyl, alcohol, keto, thioketo, sulfonyl, thio-alcohol, ester, thioester, ether, thioether, amide, thioamide, urea, thiourea, ═O, ═S, sulfonyl and heterocyclic groups as described herein. Examples of suitable substituents include alkyl groups, such as CH3, C2H5 and t-butyl groups. Other examples include OCH3, OC2H5 and OPh, phenyl, —OH, (CH2)gOH, where g is 1 to 3, OCH3, OC2H5, OPh, SCH3, SC2H5, SPh, NH2N(CH3)2, F, Cl, Br, CF3, C(O)CH3 and S(O)CH3. In one embodiment, R6 is or comprises a heterocyclic group, such as a furanyl group that is optionally substituted with a phenyl group, which, in turn, is optionally substituted with a CF3 group.
Where the substituent is halo, it may be a F, Cl, Br or I group. One or more halo substituents may be present. Where more than one halo substituent is present, the halo groups may be the same or different. In one embodiment, R6 is a CiF2i+1 group, such as a C6F13 group.
Where the substituent is a trihaloalkyl, the trihaloalkyl may be a trihalo(C1-C6)alkyl. The halo substituent may be F, Cl, Br or I. The three halo substituents may be the same or different. Preferably, the trihaloalkyl is trihalomethyl, more preferably trifluoromethyl.
Where the substituent is an alcohol or a thioalcohol, the OH or SH substituent may be coupled directly to the heterocyclic or hydrocarbyl group. Alternatively, the OH substituent may be coupled to the heterocyclic or hydrocarbyl group via, for example, —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is an ester, the substituent may have the formula C(O)OR16 or OC(O)R16, where R16 is a C1 to C6 alkyl (preferably methyl or ethyl), benzyl or phenyl group. Where the substituent is a thioester, the substituent may have the formula C(O)SR16 or SC(O)R16. The C(O)OR16, OC(O)R16 or C(O)SR16 or SC(O)R16 thioester may be coupled directly to the heterocyclic group or hydrocarbyl group or via a linking group, for example, of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is an ether, the ether substituent may have or may include a group having the formula OR17, where R17 is C1 to C6 alkyl, phenyl or benzyl. Preferably, R17 is a methyl, ethyl, propyl (i-propyl or n-propyl) or butyl (n-butyl, t-butyl, s-butyl and i-butyl). Preferred ether substituents include OCH3, OC4H9, OCH(CH3)2 and OPh. The OR17 group may be coupled directly to the heterocyclic group or hydrocarbyl group or via a linking group, for example, of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is a thioether, the thioether substituent may or may include a group having the formula SR17, where R17 is C1 to C6 alkyl, phenyl or benzyl. A preferred thioether substituent is SMe. The SR17 group may be coupled directly to the heterocyclic group or hydrocarbyl group or via a linking group e.g. of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is amide, the amide may have or may include a group of the formula N(R18)C(O)R19 or C(O)NR18R19. R18 may be selected from H and C1 to C10 alkyl, while R19 may be a C1 to C15 alkyl, trihaloalkyl (e.g. a trihalo(C1-C15)alkyl) or OR20, where R20 is a C1 to C6 alkyl. In one embodiment, R18 is H or C1 to C6 alkyl. Examples of suitable amide groups include HNC(O)C9H19, HNC(O)OC(CH3)3, HNC(O)C6F13, C(O)N(C6H13)(C6H13), HNC(O)Ph, N(CH3)C(O)C11H23, and HNC(O)1-adamantyl. The N(R18)C(O)R19 or C(O)NR18R19 group may be coupled directly to the heterocyclic group or hydrocarbyl group or via a linking group e.g. of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is thioamide, the thioamide may have or may include a group having the formula N(R18)C(S)R19 or C(S)NR18R19. The N(R18)C(S)R19 or C(S)NR18R19 group may be coupled directly to the heterocyclic group or hydrocarbyl group or via a linking group e.g. of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is urea, it may have the formula R30C(O)R31R32, where R30, R31 and R32 are independently selected from H and C1 to C6 alkyl, for example, methyl or ethyl.
Where the substituent is thiourea, it may have the formula R30C(S)R31R32, where R30, R31 and R32 are independently selected from H and C1 to C6 alkyl, for example, methyl or ethyl.
Where the substituent is a keto group, it may have or may include a group of the formula C(O)R20, where R20 is a C1 to C6 alkyl, such as a methyl, ethyl, propyl (i-propyl or n-propyl) or butyl (n-butyl, t-butyl, s-butyl and i-butyl). An example of a suitable keto group is a C(O)CH3 group. In one embodiment, the keto group comprises an oxo substituted cycloalkyl group. The cycloalkyl group may have 4 to 8 carbon atoms, for example, 5 or 6 carbon atoms. The C(O)R20 group may be coupled directly to the hydrocarbyl group or heterocyclic group or may be coupled via a linker, for example, of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is of the formula S(O)R13, R13 may be C1 to C6 alkyl, preferably methyl. The S(O)R13 may be coupled directly to the hydrocarbyl group or heterocyclic group or may be coupled via a linker, for example, of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is a sulfonyl, it may include a substituent having the formula SO2R21, where R21 is a C1 to C6 alkyl or a trihalo(C1 to C6) alkyl, such as trifluoroalkyl. These groups may be coupled directly to the hydrocarbyl or heterocyclic group or via a linker, such as one of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3.
Where the substituent is an ═O or ═S group, these are typically coupled to a ring atom of, for example, a heterocyclic, aryl or cyclic hydrocarbyl (e.g. alkyl or alkenyl) group. In one embodiment, an ═O substituent is provided on a cyclopentyl ring.
Where the substituent is an amine, the amine may be or comprise a group of the formula NR22R23, where R22 and R23 are independently selected from H and C1 to C6 alkyl. In one embodiment, both R22 and R23 are H. In another embodiment, R22 and R23 are independently selected from H, methyl and ethyl. Examples of preferred amine substituents are NH2, N(CH3)2 and N(C2H5)2. The amines may optionally be provided in salt form, for example, as a salt of HCl. The NR22R23 group may be coupled directly to the heterocyclic or hydrocarbyl group or may be coupled via a linking group, such as one of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. In one embodiment, R6 is a hydrocarbyl group that is substituted with an amine group, where the amine group is protected with a protecting group, such as t-BOC (t-butoxycarbonyl).
Where the substituent is a heterocyclic group, it may be or may include aromatic and non-aromatic, saturated and unsaturated, and monocyclic and polycyclic heterocycles. Such groups may contain one or more heteroatoms, such as O, N and S. Where two or more heteroatoms are present, these may be the same or different. Where polycyclic heterocycles are used, the heteroatom may be present in one or more (e.g. all) of the cyclic groups. The heterocyclic group preferably has 5 to 12 ring members, for example, 5, 6, 7, 8 or 9 ring members. Suitable heterocyclic groups include saturated heterocyclic groups comprising 1 or 2 heteroatoms selected from O, N and S, preferably O and N. Examples of such saturated heterocycles include tetrahydrofuranyl, oxanyl, pyrrolidinyl, piperidinyl, azepanyl, morpholinyl, dioxanyl and piperazinyl. Suitable heterocyclic groups also include saturated heterocyclic groups comprising 1 or 2 heteroatoms selected from O, N and S. Examples of such unsaturated heterocycles include furanyl, pyrrol, imidazolyl, pyrazolyl, thiazolyl, isothiazolyl, diazinyl. The heterocycles may be fused to another ring, such as a cyclohexyl ring or benzene ring. Examples of such fused heterocycles include indole, isoindole and benzothiazole. The heterocyclic group may be coupled directly to the hydrocarbyl or heterocyclic group coupled to the enamine nitrogen. Alternatively, the heterocyclic group may be coupled indirectly via a linking group, such as one of the formula —[CR14R15]t—, where t is an integer of from 0 to 12, and R14 and R15 are each independently selected from H or C1 to C2 alkyl. Preferably, t is an integer from 0 to 6, for example, 1 to 3. In one embodiment, the heterocycle comprises a ring N atom, which is optionally protected with a protecting group, such as t-BOC (t-butoxycarbonyl).
The heterocyclic group may itself be substituted. Suitable substituents are alkyl, aryl, alcohol, ether, thioether, amine, halo, trihaloalkyl, trihaloalkylether, keto, S(O)R25, where R25 is a C1 to C6 alkyl. These substituents are as defined above. However, specific examples of such substituents include methyl, ethyl, phenyl, —OH, (CH2)gOH, where g is 1 to 3, OCH3, OC2H5, OPh, SCH3, SC2H5, SPh, NH2N(CH3)2, F, Cl, Br, CF3, C(O)CH3 and S(O)CH3.
In a preferred embodiment, R6 is a phenyl group that is optionally substituted with at least one functional group selected from alkyl, aryl, halo, trihaloalkyl, alcohol, thio-alcohol, ester, thioester, ether, thioether, amide, thioamide, urea, thiourea and heterocyclic group.
The phenyl group may be substituted with a group selected from cyclohexyl, C1 to C3 alkyl, halo, halo(C1 to C3) alkyl, OH, SH, heterocyclic and OR10 or SR10, where R10 is a C1 to C4 alkyl or phenyl group. Preferably, however, the phenyl group is substituted with a heterocyclic group selected from a piperidine and morpholine group, or where the phenyl group is fused to an aromatic heterocyclic ring, preferably a pyrrole ring.
In one embodiment, R6 is selected from CH2CH(CH3)CH2C(CH3)3, cyclohexyl, adamantyl and phenyl optionally substituted with at least one functional group selected from acetyl, ═O, C2 to C6 alkenyl, C1 to C4 alkyl and thioether.
In another embodiment, R6 is selected from:




    
    
        optionally substituted with at least one functional group selected from OR12, ═O and C1 to C6 alkyl, where R12 is a C1 to C4 alkyl.
    
    


Examples of suitable compounds include:

























Preferred compounds are:



















Yet more preferred compounds are:













The following compounds are especially preferred:




Suitable or preferred features of any compounds of the present invention may also be suitable features of any other aspect.
A suitable pharmaceutically acceptable salt of a compound of the invention is, for example, a magnesium salt.
Compounds that have the same molecular formula but differ in the nature or sequence of bonding of their atoms or the arrangement of their atoms in space are termed “isomers”. Isomers that differ in the arrangement of their atoms in space are termed “stereoisomers”. Stereoisomers that are not mirror images of one another are termed “diastereomers” and those that are non-superimposable mirror images of each other are termed “enantiomers”. When a compound has an asymmetric center, for example, it is bonded to four different groups, a pair of enantiomers is possible. An enantiomer can be characterized by the absolute configuration of its asymmetric center and is described by the R- and S-sequencing rules of Cahn and Prelog, or by the manner in which the molecule rotates the plane of polarized light and designated as dextrorotatory or levorotatory (i.e., as (+) or (−)-isomers respectively). A chiral compound can exist as either individual enantiomer or as a mixture thereof. A mixture containing equal proportions of the enantiomers is called a “racemic mixture”.
The compounds of this invention may possess one or more asymmetric centers; such compounds can therefore be produced as individual (R)- or (S)-stereoisomers or as mixtures thereof. Unless indicated otherwise, the description or naming of a particular compound in the specification and claims is intended to include both individual enantiomers and mixtures, racemic or otherwise, thereof. The methods for the determination of stereochemistry and the separation of stereoisomers are well-known in the art (see discussion in Chapter 4 of “Advanced Organic Chemistry”, 4th edition J. March, John Wiley and Sons, New York, 2001), for example by synthesis from optically active starting materials or by resolution of a racemic form. Some of the compounds of the invention may have geometric isomeric centres (E- and Z-isomers). It is to be understood that the present invention encompasses all optical, diastereoisomers and geometric isomers and mixtures thereof.
It is also to be understood that certain compounds of the invention may exist in solvated as well as unsolvated forms such as, for example, hydrated forms. It is to be understood that the invention encompasses all such solvated forms.
Compounds of the invention may exist in a number of different tautomeric forms and references to compounds of the invention include all such forms. For the avoidance of doubt, where a compound can exist in one of several tautomeric forms, and only one is specifically described or shown, all others are nevertheless embraced by compounds of the invention. Examples of tautomeric forms include keto-, enol-, and enolate-forms, as in, for example, the following tautomeric pairs: keto/enol (illustrated below).




It shall also be appreciated that compounds of the present invention may also be covalently linked (at any suitable position) to other groups such as, for example, solubilising moieties (for example, PEG polymers), moieties that enable them to be bound to a solid support (such as, for example, biotin-containing moieties), and targeting ligands (such as antibodies or antibody fragments).
The compounds of the present invention are useful as antimicrobial (e.g. antibacterial or antifungal agents). Accordingly, a further aspect of the present invention provides an antimicrobial composition, preferably a topical antibacterial or antifungal composition, comprising a compound as defined herein. As discussed above, the reference to “compound” covers all isomers of that compound as well as salts and solvates thereof.
The compounds of the present invention may be used as an antimicrobial compound in paper, fabric, building materials, packaging materials, coating and paint compositions, disinfectants, detergents, household products, cosmetics and suncreams.
The compounds of the present invention may be capable of inhibiting bacterial RNA polymerase and/or undecaprenyl pyrophosphate synthase. Accordingly, a further aspect of the invention provides a method of inhibiting bacterial RNA polymerase and/or undecaprenyl pyrophosphate synthase, which comprises contacting a cell with an effective amount of a compound as defined herein (or a pharmaceutically acceptable salt thereof). This contacting step may be performed ex-vivo or on the surface of a human or animal's skin.
The compounds of the present invention may be effective against Gram positive and/or Gram negative bacteria. For example, the compounds may be effective against Gram positive bacteria selected from at least one of Metchillin-resistant S. Aureus; Penicillin and erythromycin-resistant S. pneumonia; Vancomycin resistant E. Faecium; and Vancomycin susceptible E. Faecalis. Alternatively or additionally the compounds may be effective against Gram negative bacteria, such as H. influenzae. Some embodiments of the present invention are active against Gram positive bacteria but only weakly active against Gram negative bacteria. Preferred embodiments of the present invention are especially active against bacteria, such as MRSA (Methicillin resistant Staphylococcus aureus), MDR (multi-drug resistant bacteria), PRSP (Penicillin resistant Streptococcus pneumoniae) and VRE (Vancomycin resistant enterococcus).
In a preferred embodiment, the compounds of the present invention exhibit a minimum inhibitory concentration (MIC) of 16 μg/ml or less, preferably 12 μg/ml or less, more preferably 10 μg/ml or less, even more preferably 8 μg/ml or less, yet more preferably 6 μg/ml or less. In one embodiment, the MIC is 4 μg/ml or less, preferably less than 4 μg/ml or less, for example, 2 μg/ml or less. The compounds may exhibit the above MIC's against at least one bacteria selected from Gram positive and Gram negative bacteria. Examples of bacteria are discussed herein. Specific examples are discussed herein.
Procedures for determining MIC are well known in the art. For example, for bacteria, MICs may be determined based the Clinical and Laboratory Standards Institute (CLSI) methodology (Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically; Approved Standard—seventh edition. 2006, M7-A7, CLSI, Wayne Pa.) by a 2-fold broth dilution technique in Mueller Hinton (pH7.4 Biorad). Overnight cultures may be diluted to obtain the final inoculum of 105 cfu/well. Incubation was 37° C. overnight in ambient air. The MIC may be defined as the lowest concentration which inhibited all visual growth and expressed in μg/ml. For each bacterial species, all of the molecules were tested in the same experiment in order to give a head-to-head comparison.
For fungi, MICs may be determined for the antifungus by microdilution methods using RPMI 1640 medium buffered with morpholinopropanesulfonic acid (MOPS) and supplemented with L-glutamine as described by CLSI procedures (M27-A method) (Reference method for broth dilution antifungal susceptibility testing of yeasts; Approved standard—third edition. 2006, M27-A2, CLSI, Wayne Pa.). After incubation for 24-48 hours at 35° C., the lowest concentration of drug which produced 80% reduction in visible growth compared with control may be considered as the MIC.
Synthesis
In the description of the synthetic methods described below and in the referenced synthetic methods that are used to prepare the staring materials, it is to be understood that all proposed reaction conditions, including choice of solvent, reaction atmosphere, reaction temperature, duration of the experiment and workup procedures, can be selected by a person skilled in the art.
It is understood by one skilled in the art of organic synthesis that the functionality present on various portions of the molecule must be compatible with the reagents and reaction conditions utilised.
Necessary starting materials may be obtained by standard procedures of organic chemistry. The preparation of such starting materials is described in conjunction with the following representative process variants and within the accompanying Examples. Alternatively necessary starting materials are obtainable by analogous procedures to those illustrated which are within the ordinary skill of an organic chemist.
It will be appreciated that during the synthesis of the compounds of the invention in the processes defined below, or during the synthesis of certain starting materials, it may be desirable to protect certain substituent groups to prevent their undesired reaction. The skilled chemist will appreciate when such protection is required, and how such protecting groups may be put in place, and later removed.
For examples of protecting groups see one of the many general texts on the subject, for example, ‘Protective Groups in Organic Synthesis’ by Theodora Green (publisher: John Wiley & Sons). Protecting groups may be removed by any convenient method described in the literature or known to the skilled chemist as appropriate for the removal of the protecting group in question, such methods being chosen so as to effect removal of the protecting group with the minimum disturbance of groups elsewhere in the molecule.
In one aspect, there is provided a method of synthesising a compound of the Formula I, which comprises:

    
    
        reacting a compound of the formula V below
    
    






    
    
        with a carboxylic acid of the formula R3CO2H; or
        reacting a compound of the formula V with i) a carboxylic acid of the formula R3CO2H or ii) an acid chloride of the formula R3COCl to form a compound of the formula VI below,
    
    






    
    
         and
        reacting the compound of the Formula VI with a base (preferably 4-dimethylaminopyridine or triethylamine) to convert the O-acyl derivative to the corresponding C-acyl derivative.
    
    


In another aspect, the present invention also provides a method of synthesising a compound of the Formula II, wherein Y is not OH, which comprises reacting a compound of Formula I with an amine of the formula R4R5NH.
In yet another aspect, the present invention provides a method of synthesising a compound of the Formula II, which comprises

    
    
        reacting a compound of the formula V with a compound of the formula R5—NCO, or
        reacting a compound of the formula VI′, where R is a hydrocarbyl group or R3, or preferably a C1 to C6 alkyl group,
    
    






with an amine of the formula R4R5NH, with the proviso that, where compound V is reacted with R5NCO, R4 is H.

The compound of Formula VI′ may be formed by acylating a compound of Formula V, preferably with R3OC(O)Cl.
The compound of the formula V may be prepared by reacting a compound of the Formula VII or VIII below with meldrum's acid in the presence of N,N′-Dicyclohexylcarbodiimide (DCC) and 4-dimethylaminopyridine (DMAP). Thereafter, the product is reacted with ethyl acetate under reflux.




A preferred synthetic route is shown in the scheme below:




EXAMPLES
The following compounds were tested in the Examples:































MIC determination (bacteria); MICs were determined based on Clinical and Laboratory Standards Institute (CLSI) methodology (Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically; Approved Standard—seventh edition. 2006, M7-A7, CLSI, Wayne Pa.) by a 2-fold broth dilution technique in Mueller Hinton (pH7.4 Biorad). For S. pneumoniae, the medium was supplemented with 2.5% laked horse blood. For H. influenzae, the medium was haemophilus test medium (H.T.M.). Overnight cultures were diluted to obtain the final inoculum of 105 cfu/well. Incubation was 37° C. overnight in ambient air. The MIC was defined as the lowest concentration which inhibited all visual growth and expressed in μg/ml. For each bacterial species, all of the molecules were tested in the same experiment in order to give a head-to-head comparison. The results are shown in the Tables 1 and 2 below:
MIC determination (fungus); MICs were determined for the antifungus by microdilution methods using RPMI 1640 medium buffered with morpholinopropanesulfonic acid (MOPS) and supplemented with L-glutamine as described by CLSI procedures (M27-A method) (Reference method for broth dilution antifungal susceptibility testing of yeasts; Approved standard—third edition. 2006, M27-A2, CLSI, Wayne Pa.). After incubation for 24-48 hours at 35° C., the lowest concentration of drug which produced 80% reduction in visible growth compared with control was considered as the MIC. The results are shown in the Tables 1 and 2 below.
The pharmacological properties of these derivatives were also determined and the results are shown in Table 3 below. These properties can be determined according to techniques that are well known in the art.







TABLE 1







In vitro antibiotic activity (MIC, μg/mL) of 3-acyl analogues 21-25.




















 


3ATs 20-24
3APs 25



 







Antibacterial strains



















no
n + 1
S1
S26
S4
S2
E1
E2
P1
P9
P9B
H3
H4





21a
 9
2  
8  
8  
4  
1  
2  
1  
1  
4
 8
2


21b
11
 0.25
2  
1  
1  
 0.25
0.5
<0.06
 0.12
2
 4
2


21c
13
 0.25
16  
4  
1  
2  
<0.06
 0.12
<0.06
1
>64
4


21d
 4
32  
32  
32  
32  
16  
16  
8  
4  
8
 4
1


21e
 6
1  
8  
8  
4  
2  
2  
1  
1  
4
 8
2


21f
11
8  
8  
—d
8  
8  
 0.12
2  
—c
—c
>64
—c


21g
13
64  
64  
—d
64  
8  
1  
2  
—c
—c
>64
—c


21h
 9
0.5 
2  
2  
2  
1  
1  
0.5
 0.25
4
>64
16 


21i
11
2  
8  
4  
4  
4  
0.5 
1  
1  
8
>64
>64 


21j
 8
32  
32  
32  
32  
32  
16  
4  
4  
8
 32
8


21k
10
2  
8  
8  
4  
2  
2  
1  
0.5
2
 32
4


23a
 1
8  
16  
8  
8  
8  
4  
2  
1  
4
 64
4


23b
 3
<0.06
0.5
 0.25
 0.25
 0.25
<0.06
 0.25
 0.12
1
>64
2


23c
 5
 0.25
0.5
0.5
0.5
 0.25
 0.12
<0.06
<0.06
2
>64
—c


24a
10
0.5
8  
4  
2  
0.5
0.5
0.5
 0.25
2
 8
4


24b
11
 0.25
2  
1  
1  
<0.06
<0.06
<0.06
<0.06
  0.5
 2
2


24c
12
0.5
4  
2  
2  
 0.12
 0.25
<0.06
<0.06
2
>64
8


24d
 5
2  
4  
2  
4  
2  
2  
2  
2  
4
 32
4


24e
 7
0.5
1  
2  
0.5
 0.25
0.5
 0.12
 0.12
1
 16
2


24i
 5
 0.25
1  
0.5
0.5
0.5
 0.25
 0.25
 0.25
2
 8
2


24j
 7
0.5
1  
0.5
0.5
 0.25
 0.25
 0.12
 0.12
4
>64
2


24k
 9
0.5
1  
0.5
0.5
0.5
 0.25
 0.25
 0.12
2
>64
64 


24l
 7
4  
8  
8  
8  
8  
2  
1  
1  
4
 8
2


24m
 9
2  
4  
2  
2  
2  
0.5
0.5
 0.25
4
 16
4


25a 
 9
2  
4  
2  
4  
2  
4  
0.5 
0.5
4
 16
8


25b
11
0.5
1  
0.5
0.5
0.25
0.5
 0.25
 0.25
1
 8
4


25c
13
2  
4  
1  
2  
2  
1  
1  
1  
8
>64
32 


25d
 9
8  
8  
4  
4  
4  
4  
2  
2  
8
 64
8


25e
11
4  
4  
1  
4  
1  
1  
0.5
0.5
8
>64
8
















TABLE 2







In vitro antibiotic activity (MIC, μg/mL) of 3-acyl analogues 19 and 26-31.



















S1
S26
S4
S2
E1
E2
P1
P9
P9B
H3
H4






















27a
1
4
2
2
1
2
1
0.5
4
4
1


27b
2
4
4
4
2
2
1
0.5
2
4
0.5


27c
0.25
1
0.5
1
0.5
0.12
0.12
<0.06
2
2
1


27h
0.25
0.5
0.5
0.5
0.25
0.25
<0.06
<0.06
1
2
2


27i
0.25
0.5
0.25
0.25
0.12
0.25
0.12
0.12
1
2
1


27j
16
16
16
16
8
8
4
4
4
16
4


27k
2
2
2
2
0.5
1
1
0.5
1
8
4


27n
>64
>64
>64
>64
8
2
0.5
0.5
8
>64
2


27o
4
8
16
4
4
2
0.5
0.5
4
8
2


27s
16
16
16
16
8
8
2
2
16
32
4


28b
2
4
2
2
2
1
0.5
0.25
2
8
2


28d
4
32
16
8
1
2
0.5
0.5
4
4
1


28h
1
4
4
2
0.5
0.5
0.5
0.5
4
8
4


30a
2
4
2
2
2
2
1
1
4
>64
8


31d
16
32
16
32
16
16
8
8
8
32
4


31e
2
1
4
4
4
4
2
2
4
32
4


31f
0.5
1
0.5
2
0.5
1
1
0.5
2
32
2


31g
0.12
0.5
0.5
0.5
0.25
0.25
0.5
0.25
2
32
2


31i
8
>64
16
8
2
1
2
1
4
>64
8


31j
0.5
1
1
0.5
1
0.25
0.5
0.25
8
>64
8


19c
1
2
2
2
2
2
1
1
4
16
8


19d
2
4
4
4
4
4
2
1
4
16
8


19e
4
4
4
4
2
2
2
2
8
>64
16





a-d; see foot note in Table 3,


e; Analogues 27d,e,g,p,t,u, 28j, 29b, 30b,c and 31h had MIC >32 μg/ml for all strains.


f; Analogues 27f,q (MIC; 32 μg/ml), 28a, 29a and 19b,f (MIC; 16 μg/ml) were active against H4, had MIC >32 μg/ml against the other strains.













TABLE 3







Pharmacological properties of selected tetramic acids
















RNAPa,b
DEPa
RBCLa
Hek293a
PMBCa






(IC50,
(IC50,
(IC50,
(LD50,
(LD50,

SOLa
PPBa



μM)
μM)
μM)
μM)
μM)
SIa
(μM)
(%)


















21b
—c
—c
—c
30.3
90.9
11
>300
99.9


21e
—c
>100
—c
90.9
90.9
7.3
—c
—c


21f
—c
>100
Inactived
30.3
30.3
1.5
—c
—c


21g
—c
>100
Inactived
>90.9
10.1
<0.06
—c
—c


21i
—c
>100
Actived
30.3
90.9
2.9
—c
—c


22b
>100
>100
Active
90.9
>90.9
8.6
38-75
—c


23a
—c
88.0e
Inactived
90.9
90.9
4.0
—c
—c


23b
—c
49.5
Inactived
90.9
90.9
137
—c
—c


23c
—c
19.6
Inactived
30.3
30.3
25
—c
—c


24b
25
—c
—c
30.3
90.9
12
>300
93.6


24c
—c
>100
Active
30.3
30.3
6.2
>300
99.9


24e
—c
>100
Inactived
>90.9
>90.9
>75
>300
—c


24i
33
>100
Active
10.1
30.3
<8.3
>300
100


24j
19
>100
Active
10.1
30.3
<8.9
>300
100


24k
—c
68.8
Active
10.1
90.9
<9.5
>300
—c


24m
—c
>100
Active
30.3
90.9
6.9
>300
—c


25a
>100
83.6
Inactived
>90.9
>90.9
>8.4
>300
98.9


25b
86
94.4
Inactived
>90.9
>90.9
>73
>300
—c


25d
—c
69.0
Active
90.9
90.9
9.1
150-300
—c


25e
—c
>100
Active
90.9
90.9
9.8
19-38
—c


26d
—c
>100
Inactived
>90.9
90.9
3.3
—c
—c


27a
—c
>100
Inactived
90.9
90.9
16
—c
—c


27c
>100
>100
—c
30.3
90.9
11
>200
100


27h
>100
—c
—c
30.3
90.9
21
150-300
91.9


27i
3.1
>100
Active
10.1
30.3
<16
 67-200
99.9


27k
6.7
>100
Active
30.3
90.9
5.7
>300
—c


28h
33
—c
—c
30.3
90.9
6.4
>300
100


30a
—c
>100
Inactived
>90.9
90.9
19
>300
—c


31e
11
91.4
Active
30.3
90.9
3.2
>300
—c


31f
40
>100
Inactived
90.9
>90.9
21
>300
—c


31g
>100
>100
Active
10.1
30.3
<9.1
>300
—c


31j
91
>100
Active
10.1
30.3
<11
>300
—c


19d
—c
—c
—c
90.9
90.9
9.7
>300
—c





a; Abbreviation; RNAP; In vitro activity against E. Coli RNAP, DEP; In vitro activity in depolarization of S. aureus membrane, RBCL; In vitro mammalian_red blood cell membrane lysis activity, CAN; In vitro antifungal activity against Candida albicans, Hek293; in vitro toxicities against human embryonic kidney 293 cells, PMBC; in vitro toxicities human peripheral blood cells, SI; Selectivity index; LD50 of one of lower value between Hek293 and PMBC divided by MIC against S. aureus 2, MRSA in vivo after converting the unit of LD50 from μM to μg/mL, SOL; aqueous solubility at pH 7.4 (water with 2% DMSO), PPB; ratio of plasma protein binding,


b; In vitro activity against RNAP (IC50) of analogues 24a (16 μM), 28c (>100 μM), 28g (>100 μM), 29a (>100 μM), 30c (85 μM), 31b (34 μM), 31d (>100 μM), and streptolydigin (1e, 38 μM) and In vitro activity against S. pneumonia UPPS (IC50) of analogues 25b (0.6 μM), 27i (0.4 μM) and 28g (>10 μM) were evaluated,


c; Not determined,


d; Active or inactive at 100 μM,


f; Not determined because of inactivity against S. aureus 2.

## Claims

1. An antibacterial composition comprising a compound or a pharmaceutically acceptable salt thereof, said composition optionally being a topical antibacterial composition; wherein the compound is of the Formula I or II below:




wherein
x is 0 or 1,
Y is OH or C1 to C15 alkyl,
R4 is H or C1 to C6 alkyl,
either
R1 is a C1 to C15 hydrocarbyl optionally substituted with a heterocyclic group or an ether group, and
R2 is H, ether, thioether or C1 to C8 alkyl, or
R1 and R2 together form part of a 5-membered or 6-membered ring fused to the pyrrolidine/piperidine ring,
R3 and R5 are each independently selected from a group of the formula L1-L2-R6 or L2-L1-R6, where L1 is a linker of the formula —[CR8R9]n—, where n is an integer of from 0 to 12, and R8 and R9 are in each instance each independently selected from H or C1 to C2 alkyl, and
where L2 is absent or a linker that is selected from O, S, SO, SO2, N(R′), C(O), C(O)O, [O(CH2)r]s, [(CH2)rO]s, OC(O), CH(OR′), C(O)N(R′), N(R′)C(O), N(R′)C(O)N(R′), SO2N(R′) or N(R′)SO2, where R′ and R′′ are each independently selected from hydrogen and a C1 to C2 alkyl, and where r is 1 or 2 and s is 1 to 4,
where R6 is selected from OR11, a heterocyclic and C1 to C25 hydrocarbyl group, wherein R11 is a C1 to C6 alkyl, and wherein said heterocyclic and hydrocarbyl group is optionally substituted with at least one functional group selected from alkyl, alkenyl, aryl, halo, trihaloalkyl, alcohol, thio-alcohol, keto, S(O)R11, ester, thioester, ═O, ═S, alkanoyl, ether, thioether, amide, thioamide, urea, thiourea, amine and heterocyclic group,

with the proviso that the compound is not a compound of the formula III or IV below:





wherein p is 2 or 4.

2. The composition as claimed in claim 1, wherein R1 is selected from a C1 to C10 straight chain or branched alkyl or alkenyl group, or a phenyl group that is optionally substituted with a C1 to C6 alkyl.

3. The composition as claimed in claim 1, wherein R2 is selected from hydrogen, a C1 to C6 alkyl or a thioether group of the formula (CH2)qSR′, where q is 1 to 4 and R′ is a C1 to C4 alkyl group.

4. The composition as claimed in claim 1, wherein L1 is absent or selected from (CH2)n where n is 1 to 5, or CH2C(CH3)2CH2.

5. The composition as claimed in claim 1, wherein L2 is selected from C(O)O, O(O)C, C(O)NH, HNC(O), NH, O and O(C2H4)2.

6. The composition as claimed in claim 1, with the proviso that, when the compound is of Formula I and x=0, the following condition is not met: a) R3 is methyl.

7. A method of using a compound or a pharmaceutically acceptable salt thereof as an antibacterial agent, wherein the compound is of the Formula I or II below:




wherein
x is 0 or 1,
Y is OH or C1 to C15 alkyl,
R4 is H or C1 to C6 alkyl,
either
R1 is a C1 to C15 hydrocarbyl optionally substituted with a heterocyclic group or an ether group, and
R2 is H, ether, thioether or C1 to C8 alkyl, or
R1 and R2 together form part of a 5-membered or 6-membered ring fused to the pyrrolidine/piperidine ring,
R3 and R5 are each independently selected from a group of the formula L1-L2-R6 or L2-L1-R6 , where L1 is a linker of the formula —[CR8R9]n—, where n is an integer of from 0 to 12, and R8 and R9 are in each instance each independently selected from H or C1 to C2 alkyl, and
where L2 is absent or a linker that is selected from O, S, SO, SO2, N(R′), C(O), C(O)O, [O(CH2)r]s, [(CH2)rO]s, OC(O), CH(OR′), C(O)N(R′), N(R′)C(O), N(R′)C(O)N(R′), SO2N(R′) or N(R′)SO2, where R′ and R′′ are each independently selected from hydrogen and a C1 to C2 alkyl, and where r is 1 or 2 and s is 1 to 4,
where R6 is selected from OR11 , a heterocyclic and C1 to C25 hydrocarbyl group, wherein R11 is a C1 to C6 alkyl, and wherein said heterocyclic and hydrocarbyl group is optionally substituted with at least one functional group selected from alkyl, alkenyl, aryl, halo, trihaloalkyl, alcohol, thio-alcohol, keto, S(O)R11, ester, thioester, ═O, ═S, alkanoyl, ether, thioether, amide, thioamide, urea, thiourea, amine and heterocyclic group,

with the proviso that the compound is not a compound of the formula III or IV below:





wherein p is 2 or 4.

8. The method as claimed in claim 7, wherein the compound is used as a preservative.

9. The method as claimed in claim 7, wherein the compound is used in a non-edible composition.

10. The method as claimed in claim 9, wherein the compound is used in paper, fabric, building materials, packaging materials, coating and paint compositions, disinfectants, detergents, household products, cosmetics and suncreams.

11. A method of synthesising a compound of the Formula II,




wherein
x is 0 or 1,
Y is OH or C1 to C15 alkyl,
R4 is H or C1 to C6 alkyl,
either
R1 is a C1 to C15 hydrocarbyl optionally substituted with a heterocyclic group or an ether group, and
R2 is H, ether, thioether or C1 to C8 alkyl, or
R1 and R2 together form part of a 5-membered or 6-membered ring fused to the pyrrolidine/piperidine ring,
R5 is selected from a group of the formula L1-L2-R6 or L2-L1-R6, where L1 is a linker of the formula —[CR8R9]n—, where n is an integer of from 0 to 12, and R8 and R9 are in each instance each independently selected from H or C1 to C2 alkyl, and
where L2 is absent or a linker that is selected from O, S, SO, SO2, N(R′), C(O), C(O)O, [O(CH2)r]s, [(CH2)rO]s, OC(O), CH(OR′), C(O)N(R′), N(R′)C(O), N(R′)C(O)N(R′), SO2N(R′) or N(R′)SO2, where R′ and R′′ are each independently selected from hydrogen and a C1 to C2 alkyl, and where r is 1 or 2 and s is 1 to 4,
where R6 is selected from OR11, a heterocyclic and C1 to C25 hydrocarbyl group, wherein R11 is a C1 to C6 alkyl, and wherein said heterocyclic and hydrocarbyl group is optionally substituted with at least one functional group selected from alkyl, alkenyl, aryl, halo, trihaloalkyl, alcohol, thio-alcohol, keto, S(O)R11, ester, thioester, ═O, ═S, alkanoyl, ether, thioether, amide, thioamide, urea, thiourea, amine and heterocyclic group, the method comprises

reacting a compound of the formula V below





with a compound of the formula R5NCO, or
reacting a compound of the formula VI below





with an amine of the formula R4R5NH, with the proviso that, where compound of the Formula V is reacted with R5NCO, R4 is H.

12. The method as claimed in claim 7, wherein R1 is selected from a C1 to C10 straight chain or branched alkyl or alkenyl group, or a phenyl group that is optionally substituted with a C1 to C6 alkyl.

13. The method as claimed in claim 7, wherein R2 is selected from hydrogen, a C1 to C6 alkyl or a thioether group of the formula (CH2)qSR′, where q is 1 to 4 and R′ is a C1 to C4 alkyl group.

14. The method as claimed in claim 7, wherein L1 is absent or selected from (CH2)n where n is 1 to 5, or CH2C(CH3)2CH2.

15. The method as claimed in claim 7, wherein L2 is selected from C(O)O, O(O)C, C(O)NH, HNC(O), NH, O and O(C2H4)2.

16. The method as claimed in claim 7, with the proviso that, when the compound is of Formula I and x=0, the following condition is not met: a) R3 is methyl.