Exhibit



Exhibit 4.1



SECOND SUPPLEMENTAL INDENTURE
SECOND SUPPLEMENTAL INDENTURE (this “Second Supplemental Indenture”), dated as of July 26, 2017, among Holly Energy Holdings LLC, a Delaware limited liability company, HEP Cheyenne Shortline LLC, a Delaware limited liability company (the “Guaranteeing Subsidiaries”), Holly Energy Partners, L.P., a Delaware limited partnership (“Holly Energy Partners”), and Holly Energy Finance Corp. (“Finance Corp.” and collectively with Holly Energy Partners, the “Issuers”), the other Guarantors (as defined in the Indenture referred to herein) and U.S. Bank National Association, as trustee under the Indenture referred to herein (the “Trustee”).
W I T N E S S E T H
WHEREAS, the Issuers have heretofore executed and delivered to the Trustee an indenture (the “Indenture”), dated as of July 19, 2016, providing for the issuance of 6% Senior Notes due 2024 (the “Notes”) and a First Supplemental Indenture dated as of November 2, 2016, providing for the addition of Woods Cross Operating LLC, a Delaware limited liability company, as Guarantor under the Indenture;
WHEREAS, the Indenture provides that under certain circumstances the Guaranteeing Subsidiaries shall execute and deliver to the Trustee a supplemental indenture pursuant to which the Guaranteeing Subsidiaries shall unconditionally guarantee all of the Issuers’ Obligations under the Notes and the Indenture on the terms and conditions set forth herein (the “Note Guarantee”); and
WHEREAS, pursuant to Section 9.01 of the Indenture, the Trustee is authorized to execute and deliver this Second Supplemental Indenture.
NOW, THEREFORE, in consideration of the foregoing and for other good and valuable consideration, the receipt of which is hereby acknowledged, each Guaranteeing Subsidiary and the Trustee mutually covenant and agree for the equal and ratable benefit of the Holders of the Notes as follows:
1.    CAPITALIZED TERMS.  Capitalized terms used herein without definition shall have the meanings assigned to them in the Indenture.
2.    AGREEMENT TO GUARANTEE.  Each Guaranteeing Subsidiary hereby agrees to provide an unconditional Guarantee on the terms and subject to the conditions set forth in the Note Guarantee and in the Indenture including but not limited to Article 10 thereof.
3.    NO RECOURSE AGAINST OTHERS.  No past, present or future director, officer, employee, incorporator, stockholder or agent of the Guaranteeing Subsidiaries, as such, shall have any liability for any obligations of the Issuers or any Guaranteeing Subsidiaries under the Notes, any Note Guarantees, the Indenture or this Second Supplemental Indenture or for any claim based on, in respect of, or by reason of, such obligations or their creation.  Each Holder of the Notes by accepting a Note waives and releases all such liability.  The waiver and release are part of the consideration for issuance of the Notes.  Such waiver may not be effective to waive liabilities under 


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the federal securities laws and it is the view of the U.S. Securities and Exchange Commission that such a waiver is against public policy.
4.    NEW YORK LAW TO GOVERN.  THE LAW OF THE STATE OF NEW YORK SHALL GOVERN AND BE USED TO CONSTRUE THIS FIRST SUPPLEMENTAL INDENTURE.
5.    COUNTERPARTS.  The parties may sign any number of copies of this Second Supplemental Indenture.  Each signed copy shall be an original, but all of them together represent the same agreement.
6.    EFFECT OF HEADINGS.  The Section headings herein are for convenience only and shall not affect the construction hereof.
7.    THE TRUSTEE.  The Trustee shall not be responsible in any manner whatsoever for or in respect of the validity or sufficiency of this Second Supplemental Indenture or for or in respect of the recitals contained herein, all of which recitals are made solely by each Guaranteeing Subsidiary and the Issuers.




[Remainder of Page Intentionally Left Blank]


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IN WITNESS WHEREOF, the parties hereto have caused this First Supplemental Indenture to be duly executed and attested, all as of the date first above written.
GUARANTEEING SUBSIDIARIES:
HOLLY ENERGY HOLDINGS LLC, a Delaware limited liability company




By:  /s/ John Harrison                                                                       
John Harrison
Vice President and Treasurer




HEP CHEYENNE SHORTLINE LLC, a Delaware limited liability company




By:  /s/ John Harrison                                                               
John Harrison
Vice President and Treasurer


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ISSUERS:


HOLLY ENERGY PARTNERS, L.P.


		
	By:
	HEP Logistic Holdings, L.P., 
its general partner




		
	By:
	Holly Logistic Services, L.L.C., 
its general partner






By:  /s/ John Harrison             
John Harrison
Vice President and Treasurer




HOLLY ENERGY FINANCE CORP.




By:  /s/ John Harrison             
John Harrison
Vice President and Treasurer








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OTHER GUARANTORS:
EL DORADO OPERATING LLC, a Delaware limited liability company


HEP CASPER SLC LLC, a Delaware limited liability company


HEP CHEYENNE LLC, a Delaware limited liability company


HEP EL DORADO LLC, a Delaware limited liability company


HEP LOGISTICS GP, L.L.C., a Delaware limited liability company


HOLLY ENERGY PARTNERS-OPERATING, L.P., a Delaware limited partnership


HOLLY ENERGY STORAGE-LOVINGTON LLC, a Delaware limited liability company


CHEYENNE LOGISTICS LLC, a Delaware limited liability company


EL DORADO LOGISTICS LLC, a Delaware limited liability company


EL DORADO OSAGE LLC, a Delaware limited liability company


HEP PIPELINE GP, L.L.C., a Delaware limited liability company


HEP REFINING GP, L.L.C., a Delaware limited liability company


HEP REFINING, L.L.C., a Delaware limited liability company


HEP TULSA LLC, a Delaware limited liability company




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LOVINGTON-ARTESIA, L.L.C., a Delaware limited liability company


ROADRUNNER PIPELINE, L.L.C., a Delaware limited liability company


HEP SLC, LLC, a Delaware limited liability company


HEP UNEV HOLDINGS LLC, a Delaware limited liability company


HEP UNEV PIPELINE LLC, a Delaware limited liability company


WOODS CROSS OPERATING LLC, a Delaware limited liability company


HEP MOUNTAIN HOME, L.L.C., a Delaware limited liability company


HEP PIPELINE, L.L.C., a Delaware limited liability company


HEP WOODS CROSS, L.L.C., a Delaware limited liability company


By:  /s/ John Harrison             
John Harrison
Vice President and Treasurer










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HEP FIN-TEX/TRUST RIVER, L.P., a Texas limited partnership


HEP NAVAJO SOUTHERN, L.P., a Delaware limited partnership


HEP PIPELINE ASSETS, LIMITED PARTNERSHIP, a Delaware limited partnership


		
	Each by:
	HEP Pipeline GP, L.L.C., a Delaware limited liability company, its General Partner








By:  /s/ John Harrison             
John Harrison
Vice President and Treasurer








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HEP REFINING ASSETS, L.P., a Delaware limited partnership


		
	By:
	HEP Refining GP, L.L.C., a Delaware limited liability company, its General Partner








By:  /s/ John Harrison             
John Harrison
Vice President and Treasurer














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U.S. BANK NATIONAL ASSOCIATION, 
as Trustee
By:    /s/ Brad Hounsel    
Name:    Brad Hounsel
Title:    Vice President




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