UNITED STATES

SECURITIES AND EXCHANGE
COMMISSION

Washington,
D.C. 20549





FORM 20-F/A

(Amendment No. 1)





| ̈ | Registration statement pursuant to Section 12(b) or 12(g) of the Securities Exchange Act of 1934
|- | ------------------------------------------------------------------------------------------------

OR



|x | Annual report pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934
|- | ------------------------------------------------------------------------------------
|  | For the fiscal year ended June 30, 2011                                             

OR



| ̈ | Transition report pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934
|- | ----------------------------------------------------------------------------------------

OR



| ̈ | Shell company report pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934
|- | -------------------------------------------------------------------------------------------
|  | Date of event requiring this shell company report ___________________                      

Commission file number: 001-35022



Mission NewEnergy Limited

(Exact name of Registrant as specified in
its charter)





N/A(Translation of Registrant’s name into English)



Western Australia, Australia(Jurisdiction of incorporation or organization)



Unit 4, 97 Hector Street West

Osborne Park, Western Australia 6017,
Australia(Address of principal executive offices)



Guy Burnett

Chief Financial Officer and Company Secretary

+61 431747277; guy@missionnewenergy.com

Unit 4, 97 Hector Street West

Osborne Park, Western Australia 6017,
Australia(Name, Telephone, E-mail and/or Facsimile Number and Address of Company Contact Person)













Securities registered or to be registered
pursuant to Section 12(b) of the Act:



|                              |  |                                          
|----------------------------- |  | -----------------------------------------
|Title of each class           |  | Name of each exchange on which registered
|Ordinary Shares, no par value |  | The NASDAQ Global Market                 





Securities registered or to be registered
pursuant to Section 12(g) of the Act: None.





Securities for which there is a reporting
obligation pursuant to Section 15(d) of the Act: None.



Indicate the number of outstanding shares of each of the issuer’s
classes of capital or common stock as of June 30, 2011: 8,512,259 Ordinary Shares



Indicate by check mark if the registrant is a well-known seasoned
issuer, as defined in Rule 405 of the Securities Act.



 ̈
Yes     xNo



If this report is an annual or transition report, indicate by
check mark if the registrant is not required to file reports pursuant to Section 13 or 15(d) of the Securities Exchange Act
of 1934.



 ̈
Yes     xNo



Indicate by check mark whether the registrant (1) has filed
all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months
(or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing
requirements for the past 90 days.



x Yes ̈No



Indicate by check mark whether the registrant has submitted
electronically and posted on its corporate Web site, if any, every Interactive Data File required to be submitted and posted pursuant
to Rule 405 of Regulation S-T (§232.405 of this chapter) during the preceding 12 months (or for such shorter
period that the registrant was required to submit and post such files).



 ̈ Yes     
 ̈ No



Indicate by check mark whether the registrant is a large accelerated
filer, an accelerated filer, or a non-accelerated filer. See definition of “accelerated filer and large accelerated filer”
in Rule 12b-2 of the Exchange Act. (Check one):



| ̈ Large accelerated filer |  |  ̈ Accelerated filer |  | x
    Non-accelerated filer
|------------------------- |  | ------------------- |  | ---------------------------















Indicate by check mark which basis of accounting the registrant
has used to prepare the financial statements included in this filing:



US GAAP ̈

International
Financial Reporting Standards as issued by the International Accounting Standards BoardS

Other ̈



If “Other” has been checked in response to the previous
question, indicate by check mark which financial statement item the registrant has elected to follow.



 ̈ Item 17      
 ̈ Item 18



If this is an annual report, indicate by check mark whether
the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act).



 ̈
Yes     xNo





















Explanatory
Note



We filed our Annual Report on Form 20-F for
the fiscal year ended June 30, 2011 with the Securities and Exchange Commission (the “SEC”) on December 28, 2011 (the
“Original Report”). We are filing this Amendment No. 1 on Form 20-F/A (this “Amendment”) for the sole purpose
of correcting the numbering in the exhibit index to the Original Report to properly renumber Exhibit 4.16. No other changes to
the Original Report are included in this Amendment other than the change described above. We have made no attempt in this Amendment
to modify or update the disclosures presented in the Original Report other than as noted above. Also, this Amendment does not reflect
events occurring after the filing of the Original Report. Accordingly, this Amendment should be read in conjunction with the Original
Report and our other filings with the SEC subsequent to the filing of the Original Report.





















Item 19. Exhibits



|EXHIBIT NUMBER |   | Description of Exhibit                                                                                                                                                                                                                                
|-------------- | - | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
|               |   |                                                                                                                                                                                                                                                       
|1.1            |   | Constitution of Mission NewEnergy (incorporated by reference to Exhibit 3.1 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                           
|               |   |                                                                                                                                                                                                                                                       
|4.1            |   | Convertible Note Deed Poll (incorporated by reference to Exhibit 10.1 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                                 
|               |   |                                                                                                                                                                                                                                                       
|4.2            |   | Employee Option Plan Rules (incorporated by reference to Exhibit 10.2 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                                 
|               |   |                                                                                                                                                                                                                                                       
|4.3            |   | Executive Performance Rights Plan (incorporated by reference to Exhibit 10.3 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                          
|               |   |                                                                                                                                                                                                                                                       
|4.4            |   | EPCC contract with KNM Process Systems Sdn Bhd (incorporated by reference to Exhibit 10.4 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                             
|               |   |                                                                                                                                                                                                                                                       
|4.5            | # | Product Supply Agreement with Valero Marketing and Supply Company (incorporated by reference to Exhibit 10.5 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).          
|               |   |                                                                                                                                                                                                                                                       
|4.6            |   | Form of Access, Indemnity and Insurance Deed for Directors and Ex-Directors (incorporated by reference to Exhibit 10.6 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).
|               |   |                                                                                                                                                                                                                                                       
|4.7            |   | Employment agreement (as renewed) with Nathan Mahalingam (incorporated by reference to Exhibit 10.7 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                   
|               |   |                                                                                                                                                                                                                                                       
|4.8            |   | Employment agreement with Guy Burnett (incorporated by reference to Exhibit 10.8 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                      
|               |   |                                                                                                                                                                                                                                                       
|4.9            |   | Employment agreement with James Garton (incorporated by reference to Exhibit 10.9 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                     
|               |   |                                                                                                                                                                                                                                                       
|4.10           |   | Employment agreement of Kalaiselvan Somasundaram (incorporated by reference to Exhibit 10.10 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                          
|               |   |                                                                                                                                                                                                                                                       
|4.11           |   | Employment agreement of Nadason Sinnasami (incorporated by reference to Exhibit 10.11 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                 
|               |   |                                                                                                                                                                                                                                                       
|4.12           |   | Technology License Agreement with Crown Iron Works Company (incorporated by reference to Exhibit 10.12 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                













|     |     |                                                                                                                                                                                                                                                                     
|---- | --- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
|4.13 |     | Technology Transfer Agreement with Axens (incorporated by reference to Exhibit 10.13 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                                                
|     |     |                                                                                                                                                                                                                                                                     
|4.14 |     | Long Term Supply Contract with Cargill Palm Products Sdn Bhd (incorporated by reference to Exhibit 10.14 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                            
|     |     |                                                                                                                                                                                                                                                                     
|4.15 |     | Agreement (as amended) with Trafigura Beheer B.V. Amsterdam (incorporated by reference to Exhibit 10.15 of our registration statement on Form F-1 (File No. 333-170471), as amended, initially filed with the SEC on November 8, 2010).                             
|     |     |                                                                                                                                                                                                                                                                     
|4.16 | *## | Long Term Supply contract, dated as of April 1, 2011, by and between Felda Marketing Services Sdn. Bhd. And Mission Biotechnologies Sdn. Bhd.                                                                                                                       
|     |     |                                                                                                                                                                                                                                                                     
|4.17 | *   | Employment Agreement of Samsudeen Ganny, dated as of June 21, 2011.                                                                                                                                                                                                 
|     |     |                                                                                                                                                                                                                                                                     
|8.1  | *   | List of Subsidiaries.                                                                                                                                                                                                                                               
|     |     |                                                                                                                                                                                                                                                                     
|12.1 | *   | Certification of Chief Executive Officer pursuant to Rule 13(a)-14(a) of the Securities Exchange Act of 1934, as amended.                                                                                                                                           
|     |     |                                                                                                                                                                                                                                                                     
|12.2 | *   | Certification of Chief Financial Officer pursuant to Rule 13(a)-14(a) of the Securities Exchange Act of 1934, as amended.                                                                                                                                           
|     |     |                                                                                                                                                                                                                                                                     
|13.1 | *   | Certification of Chief Executive Officer and Chief Financial Officer pursuant to Rule 13(a)-14 (b) of the Securities Exchange Act of 1934, as amended, and 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, as amended.
|     |     |                                                                                                                                                                                                                                                                     

__________



*	Previously filed.

| | # | Order for confidential treatment of portions of this document has been granted by the SEC pursuant to Rule 406 of the Securities
Act.
| | - | -------------------------------------------------------------------------------------------------------------------------------------

| | ## | Confidential treatment being requested with respects to certain portions of this exhibit.
| | -- | -----------------------------------------------------------------------------------------













SIGNATURES



The registrant hereby certifies that it meets
all of the requirements for filing on Form 20-F and that it has duly caused and authorized the undersigned to sign this annual
report on its behalf.



|                   | Mission NewEnergy Limited
|------------------ | -------------------------
|                   |                          
|Date: May 10, 2012 | By:                      
|                   | Name:                    
|                   | Title: