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Rotavirus
Surveillance Manual – Chapter 13: Rotavirus
Amin AB, Lash TL, Tate JE, Waller LA, Wikswo ME, Parashar UD, Stewart LS, Chappell J, Halasa NB, Williams JV, Michaels MG, Hickey RW, Klein EJ, Englund JA, Weinberg GA, Szilagyi PG, Staat MA, McNeal MM, Boom JA, Selvarangan R, Harrison CJ, Moffatt ME, Schuster JE, Pahud BA, Weddle GM, Azimi PH, Johnston SH, Payne DC, Bowen MD, Lopman BA. Understanding variation in rotavirus vaccine effectiveness estimates in the United States: the role of rotavirus activity and diagnostic misclassification. Epidemiology 2022;May 18. doi: 10.1097/EDE.0000000000001501. Online ahead of print. PMID: 35583516.
Esona MD, Guatam R, Katz E, Jaime J, Ward ML, Wikswo ME, Betrapally NS, Rustempasic SM, Selvarangan R, Harrison CJ, Boom JA, Englund JA, Klein EJ, Staat MA, McNeal M, Halasa NB, Chappell J, Weinberg GA, Payne DC, Parashar UD, Bowen MD. Comparative genomic analysis of genogroup 1 and genogroup 2 rotaviruses circulating in seven US cities, 2014-2016.  Virus Evolution 2021 March 12:veab023. doi.org/10.1093/ve/veab023. Online ahead of print. PMID: 34522389.Photo of laboratory
Esona MD, Ward ML, Wikswo ME, Rustempasic SM, Guatam R, Perkins C, Selvarangan R, Harrison CJ, Boom JA, Englund JA, Klein EJ, Staat MA, McNeal M, Halasa NB, Chappell J, Weinberg GA, Payne DC, Parashar UD, Bowen MD. Rotavirus genotype trends and gastrointestinal pathogen detection in the United States, 2014-2016: results from the New Vaccine Surveillance Network. J Infect Dis. 2021;16;224:1539-1549. PMID: 33822119.
Halasa N, Piya B, Stewart LS, Rahman H, Payne DC, Woron A, Thomas L, Constantine-Renna L, Garman K, McHenry R, Chappell J, Spieker AJ, Fonnesbeck C, Batarseh E, Hamdan L, Wikswo ME, Parashar U, Bowen MD, Vinjé J, Hall AJ, Dunn JR. The changing landscape of pediatric viral enteropathogens in the post-rotavirus vaccine era. Clin Infect Dis. 2020 Feb 3:ciaa100. doi: 10.1093/cid/ciaa100. Online ahead of print. PMID: 32009161.
Staat MA, Payne DC, Halasa N, Weinberg GA, Donauer S, Wikswo M, McNeal M, Edwards KM, Szilagyi PG, Bernstein DI, Curns AT, Sulemana I, Bowen M, Parashar UD, and the New Vaccine Surveillance Network. Continued evidence of the impact of rotavirus vaccine in children less than 3 years of age from the US New Vaccine Surveillance Network—a multi-site active surveillance program, 2006-2016. Clin Infect Dis. 2020;71:e421-e429. doi: 10.1093/cid/ciaa150. PubMed PMID: 32060546.
Wikswo ME, Parashar UD, Lopman B, Selvarangan R, Harrison CJ, Azimi PH, Boom JA, Sahni LC, Englund JA, Klein EJ Staat MA, McNeal MM, Halasa N, Chappell J, Weinberg GA, Szilagyi PG, Esona MD, Bowen MD, Payne DC. Evidence for household transmission of rotavirus in the United States, 2011-2016.  J Pediatr Infect Dis Soc 2020:9;181-187.  PubMed PMID: 30753568.
Aliabadi N, Wikswo ME, Tate JE, Cortese MM, Szilagyi PG, Staat MA, Weinberg GA, Halasa NB, Boom JA, Selvarangan, Englund JA, Azimi PH, Johnston SH, Klein EJ, Moffat ME, Harrison CJ, Sahni LC, Stewart L, Bernstein DI, Parashar UD, Payne DC. Factors associated with rotavirus vaccine coverage. Pediatrics 2019;143:e20181824. PubMed PMID: 30655333.
Payne DC, Englund JA, Weinberg GA, Halasa NB, Boom JA, Staat MA, Selvarangan R, Azimi PH, Klein EJ, Szilagyi PG, Chappell J, Sahni LC, McNeal M, Harrison CJ, Moffatt ME, Johnston SH, Mijatovic-Rustempasic S, Esona MD, Tate JE, Curns AT, Wikswo ME, Suleman I, Bowen MD, Parashar UD. Association of rotavirus vaccination with inpatient and emergency department visits among children seeking care for acute gastroenteritis, 2010-2016. JAMA Netw Open 2019; Sep 4;2(9):e1912242. doi: 10.1001/jamanetworkopen.2019.12242. PubMed PMID: 31560386.
Shane AL, Weinberg GA. Can we further increase protection against rotavirus by reducing 2 barriers to immunization, inpatient hospitalization and older age? J Pediatric Infect Dis Soc. 2019 Jul 18. pii: piz046. doi: 10.1093/jpids/piz046. [Epub ahead of print] PubMed PMID: 31318433.
Hassan F, Kanwar N, Harrison CJ, Halasa NB, Chappell JD, Englund JA, Klein EJ, Weinberg GA, Szilagyi PG, Moffatt ME, Oberste MS, Nix WA, Rogers S, Bowen MD, Vinjé J, Wikswo ME, Parashar UD, Payne DC, Selvarangan R. Viral etiology of acute gastroenteritis in US children <2 years in the post-rotavirus vaccine era. J Pediatr Infect Dis Soc. 2018 Sep 3. doi: 10.1093/jpids/piy077. [Epub ahead of print] PubMed PMID: 30184153
Hofstetter AM, Lacombe K, Klein EJ, Jones C, Strelitz B, Jacobson E, Ranade D, Ward ML, Mijatovic-Rustempasic S, Evans D, Wikswo M, Bowen MD, Parashar UD, Payne DC, Englund JA. Risk of Rotavirus Nosocomial Spread After Inpatient Pentavalent Rotavirus Vaccination. Pediatrics. 2018;141:e20171110.
Kolsin JM, Lopman BA, Payne DC, Wikswo ME, Dunn JR, Halasa NB, Hall AJ. Evaluating prior antibiotic use as a risk factor for acute gastroenteritis among children in Davidson County, Tennessee – 2014-2015.  Pediatr Infect Dis J 2018;7:e86-e91.
Bowen MD, Mijatovic-Rustempasic S, Esona MD, Teel EN, Gautam R, Sturgeon M, Azimi PH, Baker CJ, Bernstein DI, Boom JA, Chappell J, Donauer S, Edwards KM, Englund JA, Halasa NB, Harrison CJ, Johnston SH, Klein EJ, McNeal MM, Moffatt ME, Rench MA, Sahni LC, Selvarangan R, Staat MA, Szilagyi PG, Weinberg GA, Wikswo ME, Parashar UD, Payne DC. Rotavirus Strain Trends During the Postlicensure Vaccine Era: United States, 2008-2013. *J Infect Dis*. 2016 Sep 1;214(5):732-8.
Mijatovic-Rustempasic S, Roy S, Teel EN, Weinberg GA, Payne DC, Parashar UD, Bowen MD. Full genome characterization of the first G3P[24] rotavirus strain detected in humans provides evidence of interspecies reassortment and mutational saturation in the VP7 gene.  J Gen Virol 2016;97:389-402.
Nicholson MR, Van Horn GT, Tang YW, Vinjé J, Payne DC, Edwards KM, Chappell JD. Using multiplex molecular testing to determine the etiology of acute gastroenteritis in children. J Pediatr 2016;176:50-56.e2
Payne DC, Sulemana I, Parashar UD; New Vaccine Surveillance Network. Evaluation of Effectiveness of Mixed Rotavirus Vaccine Course for Rotavirus Gastroenteritis. *JAMA Pediatr*. 2016 Jul 1;170(7):708-10.
Tate JE, Patel MM, Cortese MM, Payne DC, Lopman BA, Yen C, Parashar UD. Use of patients with diarrhea who test negative for rotavirus as controls to estimate rotavirus vaccine effectiveness through case-control studies. Clin Infect Dis 2016;62(Suppl 2):S106-14.
Ward ML, Mijatovic-Rustempasic S, Roy S, Rungsrisuriyachai K, Boom JA, Sahni LC, Baker CJ, Rench MA, Wikswo ME, Payne DC, Parashar UD, Bowen MD. Molecular characterization of the first G24P[14] rotavirus strain detected in humans. Infect Genet Evol. 2016;43:338-342
Foster MA, Iqbal J, Zhang C, McHenry R, Cleveland BE, Romero-Herazo Y, Fonnesbeck C, Payne DC, Chappell JD, Halasa N, Gómez-Duarte OG. Enteropathogenic and enteroaggregative E. coli in stools of children with acute gastroenteritis in Davidson County, Tennessee. Diagn Microbiol Infect Dis 2015;83:319-24.
Payne DC, Currier RL, Staat MA, Sahni LC, Selvarangan R, Halasa NB, Englund JA, Weinberg GA, Boom JA, Szilagyi PG, Klein EJ, Chappell J, Harrison CJ, Davidson BS, Mijatovic-Rustempasic S, Moffatt MD, McNeal M, Wikswo M, Bowen MD, Morrow AL, Parashar UD. Epidemiologic Association Between FUT2 Secretor Status and Severe Rotavirus Gastroenteritis in Children in the United States. *JAMA Pediatr*. 2015 Nov;169(11):1040-5.
Payne DC, Selvarangan R, Azimi PH, Boom JA, Englund JA, Staat MA, Halasa NB, Weinberg GA, Szilagyi PG, Chappell J, McNeal M, Klein EJ, Sahni LC, Johnston SH, Harrison CJ, Baker CJ, Bernstein DI, Moffatt ME, Tate JE, Mijatovic-Rustempasic S, Esona MD, Wikswo ME, Curns AT, Sulemana I, Bowen MD, Gentsch JR, Parashar UD. Long-term Consistency in Rotavirus Vaccine Protection: RV5 and RV1 Vaccine Effectiveness in US Children, 2012-2013. *Clin Infect Dis*. 2015 Dec 15;61(12):1792-9.
Sahni LC, Tate JE, Payne DC, Parashar UD, Boom JA. Variation in rotavirus vaccine coverage by provider location and subsequent disease burden. Pediatrics 2015;135:e432-9.
Dennis AF, McDonald SM, Payne DC, Mijatovic-Rustempasic S, Esona MD, Edwards KM, Chappell JD, Patton JT. Molecular epidemiology of contemporary G2P[4] human rotaviruses co-circulating in a single U.S. community: footprints of a globally transitioning genotype. J Virol 2014;88:3789-801.
Weinberg GA. Unexpected Benefits of Immunization: Rotavirus Vaccines Reduce Childhood Seizures [invited editorial]. *Clin Infect Dis* 2014;58:178-180.
Mijatovic-Rustempasic S, Teel EN, Kerin TK, Hull J, Roy S, Weinberg GA, Payne DC, Parashar UD, Gentsch JR, Bowen MD. Genetic analysis of G12P[8] rotaviruses detected in the largest U.S. G12 genotype outbreak on record. *Infect Genetics Evol* 2014;21:214-219.
Donauer S, Payne DC, Edwards KM, Szilagyi PG, Hornung RW, Weinberg GA, Chappell J, Hall CB, Parashar UD, Staat MA. Determining the effectiveness of the pentavalent rotavirus vaccine against rotavirus hospitalizations and emergency department visits using two study designs. Vaccine 2013;31:2692-2697.
Payne DC, Boom JA, Staat MA, Edwards KM, Szilagyi PG, Klein EJ, Selvarangan R, Azimi PH, Harrison C, Moffatt M, Johnston SH, Sahni LC, Baker CJ, Rench MA, Donauer S, McNeal M, Chappell J, Weinberg GA, Tasslimi A, Tate JE, Wikswo M, Curns AT, Sulemana I, Mijatovic-Rustempasic S, Esona MD, Bowen MD, Gentsch JR, Parashar UD. Effectiveness of pentavalent and monovalent rotavirus vaccines in concurrent use among US children <5 years old, 2009-2011. *Clin Infect Dis* 2013;57:13-20.
Kilgore A, Donauer S, Edwards KM, Weinberg GA, Payne DC, Szilagyi PG, Rice M, Cassedy A, Ortega-Sanchez IR, Parashar UD, Staat MA. Rotavirus-associated hospitalization and emergency department costs and rotavirus vaccine program impact. *Vaccine* 2013;31:4164-4171.
Tate JE, Haynes A, Payne DC, Cortese MM, Lopman BA, Patel MM, Parashar UD.  Trends in national rotavirus activity before and after introduction of rotavirus vaccine into the National Immunization Program in the United States, 2000–2012.  Pediatr Infect Dis J 2013;32:741–4.
Tate JE, Mijatovic-Rustempasic S, Tam KI, Lyde FC, Payne DC, Szilagyi PG, Edwards KM, Staat MA, Weinberg GA, Hall CB, Chappell J, McNeal M, Gentsch JR, Bowen MD, and Parashar UD. Comparison of 2 assays for diagnosing rotavirus and evaluating vaccine effectiveness in children with gastroenteritis. Emerg Infect Dis 2013;19:1245-52.
Weinberg GA, Teel EN, Mijatovic-Rustempasic S, Payne DC, Roy S, Foytich K, Parashar UD, Gentsch JR, Bowen MD. Detection of novel rotavirus strain by vaccine postlicensure surveillance. Emerg Infect Dis 2013;19:1321-1323.
Boom JA, Sahni L, Payne DC, Bowen MD, Tate JE, Rench M, Parashar UD, Baker C et al. Symptomatic infection and detection of vaccine and vaccine-reassortant rotavirus strains in 5 children: A case series. *J Infect Dis* 2012; 206:1275-9.
Bowen MD, Payne DC.  Rotavirus vaccine-derived shedding and viral reassortants. Expert Rev Vaccines 2012; 11:1311–4.
Lopman BA, Payne DC, Tate JE, Patel MM, Cortese MM, Parashar UD. Post-licensure experience with rotavirus vaccination in high and middle income countries; 2006-2011.  Curr Opin Virol 2012;2:434–42.
Williams DJ, Edwards KM, Payne DC, Manning J, Parashar UD, Lopman BA. Decline in gastroenteritis-related triage calls during the rotavirus season following rotavirus vaccine licensure. *Pediatrics* 2012; 130: e872-8.
McDonald SM, McKell AO, Rippinger CM, McAllen JK, Akopov A, Kirkness EF, Payne DC, Edwards KM, Chappell JD, Patton JT. Diversity and relationships of co-circulating modern human rotaviruses revealed using large-scale comparative genomics. *J Virol* 2012; 86:9148-62.
Weinberg GA, Payne DC, Teel EN, Mijatovic-Rustempasic S, Bowen MD, Wikswo M, Gentsch JR, Parashar UD. First reports of human rotavirus G8P[4] gastroenteritis in the United States. *J Clin Microbiol* 2012;50:1118-1121.
Payne DC, Humiston S, Opel D, Kennedy A, Wikswo M, Downing K, Klein EJ, Kobayashi A, Locke D, Albertin C, Chesley C, Staat MA. A multi-center, qualitative assessment of pediatrician and maternal perspectives on rotavirus vaccines and the detection of porcine circovirus. BMC Pediatr 2011;11:83.
Payne DC, Staat MA, Edwards KM, Szilagyi PG, Weinberg GA, Hall CB, Chappell J, Curns AT, Wikswo M, Tate JE, Lopman BA, Parashar UD; New Vaccine Surveillance Network (NVSN). Direct and indirect effects of rotavirus vaccination upon childhood hospitalizations in 3 US Counties, 2006-2009. *Clin Infect Dis* . 2011;53:245-53.
Staat MA, Payne DC, Donauer S, Weinberg GA, Edwards KM, Szilagyi PG, Griffin MR, Hall CB, Curns AT, Gentsch JR, Salisbury S, Fairbrother G, Parashar UD; New Vaccine Surveillance Network (NVSN). Effectiveness of pentavalent rotavirus vaccine against severe disease. *Pediatrics* . 2011;128:e267-e275.
Payne DC, Edwards KM, Bowen MD, Keckley E, Peters J, Esona MD, Teel EN, Kent D, Parashar UD, Gentsch JR. Sibling transmission of vaccine-derived rotavirus (RotaTeq) associated with rotavirus gastroenteritis. Pediatrics 2010;125:e438-41.
Weinberg GA, Szilagyi PG. Vaccine epidemiology: efficacy, effectiveness, and the translational research roadmap. J Infect Dis. 2010;201:1607-10.
Payne DC, Szilagyi PG, Staat MA, Edwards KM, Gentsch JR, Weinberg GA, Hall CB, Curns AT, Clayton H, Griffin MR, Fairbrother G, Parashar UD. Secular variation in US rotavirus disease rates and serotypes—Implications for assessing the rotavirus vaccination program. Pediatr Infect Dis J 2009;28:948-953 [correction 2010;29:287-8].
Centers for Disease Control and Prevention. Delayed onset and diminished magnitude of rotavirus activity – United States, November 2007-May 2008.  MMWR 2008;57:697–700.
Payne DC, Staat MA, Edwards KM, Szilagyi PG, Gentsch JR, Stockman LJ, Curns AT, Griffin M, Weinberg GA, Hall CB, Fairbrother G, Alexander J, Parashar UD. Active population-based surveillance for severe rotavirus gastroenteritis in US children. Pediatrics 2008;122:1235-1243.Norovirus
Weinberg GA. Outbreak epidemiology: One of many new frontiers of norovirus biology [invited editorial].  J Infect Dis 2018; Nov 15. doi: 10.1093/infdis/jiy570. [Epub ahead of print] PubMed PMID: 30445582.
Currier RL, Payne DC, Staat MA, Selvarangan R, Shirley SH, Halasa N, Boom JA, Englund JA, Szilagyi PG, Harrison CJ, Klein EJ, Weinberg GA, Wikswo ME, Parashar U, Vinjé J, Morrow AL. Innate Susceptibility to Norovirus Infections Influenced by FUT2 Genotype in a United States Pediatric Population. *Pediatrics*. 2015 Feb;135(2):e432-9.
Payne DC, Vinjé J, Szilagyi PG, Edwards KM, Staat MA, Weinberg GA, Hall CB, Chappell J, Bernstein DI, Curns AT, Wikswo M, Shirley S, Hall AJ, Lopman BA, Parashar UD. Norovirus and medically attended gastroenteritis in U.S. children. *N Engl J Med* 2013;368:1121-30.
Hall AJ, Lopman BA, Payne DC, Patel MM, Gastañ aduy PA, Vinjé J, et al. Norovirus disease in the United States. *Emerg Infect Dis.,* 2013;19:1198-205.
Wikswo ME, Desai R, Edwards KM, Staat MA, Szilagyi PG, Weinberg GA, Curns AT, Lopman BA, Vinjé J, Parashar UD, Payne DC, Hall AJ. Clinical profile of children with norovirus disease in the rotavirus vaccine era. Emerg Infect Dis 2013;19:1691-1693.Other
Pahud BA, Hassan F, Harrison CJ, Halasa NB, Chappell JD, Englund JA, Klein EJ, Szilagyi PG, Weinberg GA, Sherman AK, Polage C, Wikswo ME, McDonald LC, Payne DC, Selvarangan  R. Detection of Clostridioides difficile by real-time polymerase chain reaction in young children does not predict disease. Hosp Pediatrics. 2020;10:555-562. PMID: 32482733.
Pindyck T, Hall AJ, Tate JE, Cardemil CV, Kambhampati AK, Wikswo ME, Payne DC, Grytdal S, Boom JA, Englund JA, Klein EJ, Halasa N, Selvarangan R, Staat MA, Weinberg GA, Beenhouwer DO, Brown ST, Holodniy M, Lucero-Obusan C, Marconi VC, Rodriguez-Barradas MC, Parashar U. Validation of acute gastroenteritis-related International Classification of Diseases, Clinical Modification codes in pediatric and adult US populations. Clin Infect Dis. 2020;70:2423-2427. PubMed PMID: 31626687..
Schuster JE, Johnston SH, Piya B, Dulek DE, Wikswo ME, McHenry R, Browne H, Gautam R, Bowen MD, Vinjé J, Payne DC, Azimi P, Selvarangan R, Halasa N, Englund JA. Infectious causes of acute gastroenteritis in us children undergoing allogeneic hematopoietic cell transplant: a longitudinal, multicenter study. J Pediatric Infect Dis Soc. 2020;9:421-427. PMID: 31550350.
Chhabra P, Gregoricus N, Weinberg GA, Halasa N, Chappell J, Hassan F, Selvarangan R, Mijatovic-Rustempasic S, Ward ML, Bowen M, Payne DC, Vinjé J. Comparison of three multiplex gastrointestinal platforms for the detection of gastroenteritis viruses. J Clin Virol. 2017;95:66-71.
Islam S, Selvarangan R, Kanwar N, McHenry R, Chappell JD, Halasa N, Wikswo ME, Payne DC, Azimi PH, McDonald LC, Gomez-Duarte OG. Intestinal Carriage of Third-Generation Cephalosporin-Resistant and Extended-Spectrum β-Lactamase-Producing Enterobacteriaceae in Healthy US Children. J Pediatric Infect Dis Soc. 2017;7:234-240.
Chhabra P, Payne DC, Szilagyi PG, Edwards KM, Staat MA, Shirley SH, Wikswo M, Nix
Chhabra P, Payne DC, Szilagyi PG, Edwards KM, Staat MA, Shirley SH, Wikswo M, Nix WA, Lu X, Parashar UD, Vinjé J. Etiology of viral gastroenteritis in children <5 years of age in the United States, 2008-2009. *J Infect Dis*. 2013;208:790-800.
Cortese MM, Staat MA, Weinberg GA, Edwards KM, Rice MA, Szilagyi PG, Hall CB, Payne DC, Parashar UD. Underestimation of intussusception rates in infants: implications for monitoring vaccine safety. J Infect Dis 2009;200(Suppl 1):S264-S270.Top of Page
							
					
							Last Reviewed:  September 9, 2022						Source: 	National Center for Immunization and Respiratory Diseases (NCIRD), Coronavirus and Other Respiratory Viruses Division
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