Exhibit 31.1

CERTIFICATION OF THE CHIEF EXECUTIVE OFFICER OF THE COMPANY
PURSUANT TO SECURITIES EXCHANGE ACT RULES 13A-14 AND 15D-14

CERTIFICATION

I, Joseph L. Boutin, certify that:

|1. | I have reviewed this annual report on Form 10-K of Merchants Bancshares, Inc.;                                                                                                                                                                                                                                          
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|2. | Based on my knowledge, this annual report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this annual report;
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|3. | Based on my knowledge, the financial statements, and other financial information included in this annual report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report;                          
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|4. | The registrant's other certifying officer and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) for the registrant and we have:                                                                                          
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|   | (c)                                                                                                                                                                                                                                                                                                                     
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|5. | The registrant's other certifying officer and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant's auditors and the audit committee of registrant's board of directors (or persons performing the equivalent function)::                             
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|   | (b)                                                                                                                                                                                                                                                                                                                     



Date: March 12, 2004

|/s/ Joseph L. Boutin                  | 
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|Joseph L. Boutin                      | 
|President and Chief Executive Officer | 



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