# Final Candidate Contaminant List 3 Microbes: Identifying the Universe

### Office of Water (4607M) EPA 815-R-09-004 August 2009 www.epa.gov/safewaterEPA-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

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## Final CCL 3

EPA is including twelve pathogens on the fi nal Candidate Contaminant List 3 (CCL 3), one more than the eleven pathogens on the Dr aft CCL 3. The Agency is adding Adenovirus, Enterovirus, and Mycobacterium avium , and is removing Vibrio cholerae and Entamoeba histolytica from the Final CCL 3 (See Exhibit 1).

The protocol EPA used to select the micr obial contaminants for the Draft CCL 3 is described in detail in the February 21, 2008, notice (73 FR 9631, 9644; USEPA, 2008a). Except for a minor change in the scoring step of th e microbial CCL 3 process, (see the Final CCL 3 Microbes: PCCL to CCL Proce ss) the protocol for selecting pathogens for the final CCL 3 remains the same as the protocol for the draft CCL 3. Specifically, this step of the process for identifying the universe is unchanged from the Draft CCL 3.



## CCL 3 Microbes: Identifying the Universe

The Universe process began with the list of 1,415 human pathogens compiled by Taylor et al. (2001). This list of bact eria, viruses, protozoa, helminths, and fungi was adopted upon the recommendation of the National Drinking Water Advisory Committee (NDWAC) as the starting point for the CCL 3 microbial universe. The Agen cy added organisms to the Taylor et al. (2001) list and updated some nomenclature. EPA acknow ledges that given the dynamic nature of ongoing microbial research, any list of all human pathogens must be periodically updated to remain accurate.

1.0 Background and Scope

The Safe Drinking Water Act (SDWA), as amended in 1996, requires EPA to publish a list of contaminants that are known or anticipa ted to occur in public water systems and which may require regulation under the SDWA. This list is called the Contaminant Candidate List (CCL). The first CCL (CCL 1) was publishe d in March 1998 (USEPA, 1998) and the second CCL (CCL 2) was published Fe bruary 24, 2005 (USEPA, 2005).

EPA requested assistance from the National Academy of Sciences National Research Council’s Water Science and Technology Board (N RC) for developing a more robust approach for identifying and prioritizing potential drinking water contaminants. The NRC formed the Committee on Drinking Water Contaminan ts, and the committee published their recommendations in 1999 and 2001 (NRC, 1999a; NRC, 1999b; NRC, 2001).

In September 2002, at EPA’s request, NDWA C formed the CCL Classification Process workgroup to evaluate the NRC recommendati ons and provide advice to EPA regarding implementation of the recommendations. The NDWAC workgroup completed its deliberations and issued a report in May, 2004.EPA-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

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### 2.0 Additions to the List Compiled by Taylor et al., 2001

EPA followed NDWAC’s recommendation to sp ecifically use Taylor , et al. (2001) and literature reviews as the starti ng point for the Microbial CCL 3 Universe (NDWAC, 2004). As EPA reviewed Taylor et al. (2001) , additional microbial contaminants were also identified. EPA looked at fungi in drinking water literature and identified 6 fungi reporte d to occur in drinking water distribution systems that did not appear on the Taylor lis t (Exhibit 1). EPA also added reovirus to the universe based on additional health effects information (Tyler, et al., 2004).

In October 2006, EPA published a notice in the Federal Register (USEPA, 2006) requesting chemical and microbial contaminant nomi nations as part of th e process to identify emerging contaminants that should be consid ered for the CCL. Through this process, 24 microbial contaminants were nominated by th e public (USEPA, 2007). Twenty-two of the microbes were already included on the CCL 3 Univ erse. The two addition al microbes nominated

were Methylobacterium ( with two species) and mimivirus. These bacterial species, two viral groups and six fungal species were added to the microbial universe which brings the universe list to 1,425 microbes (noted with an *). The full CCL 3 microbial universe list is presented in Exhibit 2.

Exhibit 1. Fungi Added to the Microbial Universe

Organism Reference Arthrographis kelrae Patterson, 2005 Chryosporium zontatum

. Arvanitidou et al., 1999

Geotrichum candidum Rosenzweig et al., 1986 Sporotrichum pruinosum Doggett, 2000 Stachybotrys chartarum Dogget, 2000 Stemphylium macrosporoideum West, 1986EPA-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

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### 3.0 References

Arvanitidou, M. K. Kanellou, T. C. Cons tantinides, and V. Katsouyannopoulos. 1999. The occurrence of fungi in hospital and community potable waters. Letters in Applied Microbiology 29:81-84.

Doggett, M. S. 2000. Characteriza tion of fungal biofilm s within a municipal water distribution system. Applied and Environm ental Microbiology 66:1249-1251.

Nagy, L. A. and B. H. Olson. 1982. The occurren ce of filamentous fungi in drinking water distribution systems. Canadian Journal of Microbiology 28:667-671.

National Research Council (NRC) . 1999a. Setting Priorities for Drinking Water Contaminants. National Academy Press, Washington, DC.

National Research Council (NRC). 1999b. Identif ying Future Drinking Water Contaminants. National Academy Press, Washington, DC.

National Research Council (NRC). 2001. Classi fying Drinking Water Contaminants for Regulatory Consideration. National Academy Press, Washington DC.

National Drinking Water Advisory Council (NDWAC). 2004. National Drinking Water Advisory Council Report on the CCL Classifica tion Process to the U. S. Environmental Protection Agency, May 19, 2004

Patterson, Thomas F. 2005. Advances and challenges in management of invasive Mycoses. Lancet 2005; 366: 1013–25.

Rosenzweig, W. D., W. D., H. Minnigh, and W. O. Pipes. 1986. Fungi in potable water distribution systems. Journal of th e American Water Works Association 78(1):53-55.

Taylor, L. H., S. M. Latham, and M. E. Woolhouse. 2001. Risk factors for human disease emergence Philosophical Transactions of the Royal Society of London B. Vol. 356, pp. 983-989.

United States Environmental Protection Agency (USEPA). 1998. Announcement of the drinking water contaminant candidate list. Federal Register 63(49):10273-10287.

United States Environmental Protection Agency (USEPA). 2005. Drinking water contaminant candidate list 2; Final Notice. Federal Register 70(36):9071-9077.

United States Environmental Protection Agency (USEPA). 2006. Request for nominations of drinking water contaminants for the contaminan t candidate list. Federal Register 71(199):60704- 60708.

United States Environmental Protection Agency (USEPA). 2008. Summary of Nominations for the Third Contaminant Candidate List.EPA-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

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### West, P. R. 1986. Isolation rates and characterization of fungi in drinking water distribution systems. Proceedings of the Water Quality Technology Conference, American Water Works Association, Denver, CO.OW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

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## Appendix A: The CCL 3 Microbial Universe ListOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

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## The CCL 3 Microbial Universe List

The list of 1,415 microorganisms compiled by Tayl or et al. (2001) incl udes bacteria and rickettsia, viruses and prions, protozoa, helminth s, and fungi. The the microbial nomenclature of the list represents the nomenclature used by th e original author and the taxonomic understanding as of the date of publication. Due to the dynami c nature of microbial research, Appendix A is incomplete, and in a few instances inaccurate (e.g., listing a microorganism under different names). No attempt was made to correct erro rs in the list; and it was adopted verbatim. Additions to the list were made by EPA following solicitation of nominations from the scientific community and as the result of new informati on on emerging pathogens of potential relevance. The list is presented alphabetically for each of the five microbiological groups in Exhibit 2.

Exhibit 2. The CCL 3 Microbial Universe

Bacteria and Rickettsia

Abiotrophia defectiva Achromobacter piechaudii Achromobacter xylosoxidans Acidaminococcus fermentans Acinetobacter baumannii Acinetobacter calcoaceticus Acinetobacter haemolyticus Acinetobacter johnsonii Acinetobacter junii Acinetobacter lwoffii Acinetobacter radioresistens Actinobacillus equuli Actinobacillus hominis Actinobacillus lignieresii Actinobacillus pleuropneumoniae Actinobacillus suis Actinobacillus ureae Actinomyces georgiae Actinomyces gerencseriae Actinomyces israelii Actinomyces meyeri Actinomyces naeslundii Actinomyces neuii Actinomyces odontolyticus Actinomyces radingae Actinomyces turicensis Aerococcus viridans Aeromonas caviaeOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A3 Aeromonas hydrophila Aeromonas sobria Aeromonas veronii Alcaligenes odorans Amycolatopsis orientalis Arcanobacterium bernardiae Arcanobacterium heamolyticum Arcanobacterium pyogenes Arcobacter butzleri Arcobacter cryaerophilus Bacillus anthracis Bacillus cereus Bacillus circulans Bacillus co agulans Bacillus licheniformis Bacillus mycoides Bacillus pumilus Bacillus sphaericus Bacillus subtilis Bacillus thuringiensis Bacteroides caccae Bacteroides distasonis Bacteroides eggerthii Bacteroides forsythus Bacteroides fragilis Bacteroides galacturonicus Bacteroides merdae Bacteroides ovatus Bacteroides pectinophilus Bacteroides splanchnicus Bacteroides stercoris Bacteroides thetaiotaomicron Bacteroides uniformis Bacteroides ureolyticus Bacteroides vulgatus Bartonella bacilliformis Bartonella elizabethae Bartonella henselae Bartonella quintana Bergeyella zoohelcum Bifidobacterium dentium Bilophila wadsworthia Bordetella aviumOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A4 Bordetella bronchiseptica Bordetella parapertussis Bordetella pertussis Borrelia brasiliensis Borrelia burgdorferi Borrelia caucasica Borrelia crocidurae Borrelia duttonii Borrelia hermsii Borrelia hispanica Borrelia latyschewii Borrelia mazzottii Borrelia parkeri Borrelia persica Borrelia recurrentis Borrelia turicatae Borrelia venezuelensis Brevibacillus brevis Brevundimonas diminuta Brevundimonas vesicularis Brucella melitensis Burkholderia cepacia Burkholderia mallei Burkholderia pseudomallei Campylobacter coli Campylobacter concisus Campylobacter curvus Campylobacter fetus Campylobacter gracilis Campylobacter hyointestinalis Campylobacter jejuni Campylobacter lari Campylobacter rectus Campylobacter sputorum Campylobacter upsaliensis Capnocytophaga canimorsus Capnocytophaga cynodegmi Capnocytophaga gingivalis Capnocytophaga ochracea Capnocytophaga sputigena Cardiobacterium hominis Cedecea davisae Cedecea lapagei Cedecea neteriOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A5 Cellulomonas cellulans Cellulomonas turbata Centipeda periodontii Chlamydia trachomatis Chlamydophila pneumoniae Chlamydophila psittaci Chromobacterium violaceum Chryseobacterium balustinum Chryseobacterium meningosepticum Citrobacter amalonaticus Citrobacter braakii Citrobacter farmeri Citrobacter freundii Citrobacter koseri Citrobacter rodentium Citrobacter sedlakii Citrobacter werkmanii Citrobacter youngae Clostridium baratii Clostridium bifermentans Clostridium botulinum Clostridium butyricum Clostridium chauvoei Clostridium difficile Clostridium fallax Clostridium histolyticum Clostridium novyi Clostridium perfringens Clostridium ramosum Clostridium septicum Clostridium sordellii Clostridium sporogenes Clostridium tertium Clostridium tetani Collinsella aerofaciens Comamonas testosteroni Corynebacterium afermentans Corynebacterium argentoratense Corynebacterium bovis Corynebacterium diphtheriae Corynebacterium jeikeium Corynebacterium kutscheri Corynebacterium macginleyi Corynebacterium minutissimumOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A6 Corynebacterium propinquum Corynebacterium pseudodiphthericum Corynebacterium pseudotuberculosis Corynebacterium striatum Corynebacterium ulcerans Corynebacterium urealyticum Corynebacterium xerosis Coxiella burnetii Delftia acidovorans Dermatophilus congolensis Dichelobacter nodosus Edwardsiella hoshinae Edwardsiella tarda Eggerthella lenta Ehrlichia chaffeensis Ehrlichia equi Ehrlichia ewingii Ehrlichia phagocytophila Ehrlichia sennetsu Eikenella corrodens Enterobacter aerogenes Enterobacter amnigenus Enterobacter asburiae Enterobacter cancerogenus Enterobacter cloacae Enterobacter gergoviae Enterobacter hormaechei Enterobacter sakazakii Enterococcus avium Enterococcus casseliflavus Enterococcus durans Enterococcus faecalis Enterococcus faecium Enterococcus flavescens Enterococcus gallinarum Enterococcus hirae Enterococcus mundtii Enterococcus raffinosus Erysipelothrix rhusiopathiae Escherichia coli Eubacterium brachy Eubacterium combesii Eubacterium contortum Eubacterium cylindroidesOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A7 Eubacterium limosum Eubacterium moniliforme Eubacterium multiforme Eubacterium nodatum Eubacterium rectale Eubacterium saburreum Eubacterium saphenum Eubacterium sulci Eubacterium tenue Eubacterium timidum Ewingella americana Fibrobacter intestinalis Filifactor alocis Finegoldia magna Fluoribacter bozemanae Fluoribacter dumoffii Fluoribacter gormanii Francisella tularensis Fusobacterium mortiferum Fusobacterium necrophorum Fusobacterium nucleatum Fusobacterium periodonticum Fusobacterium ulcerans Fusobacterium varium Gardnerella vaginalis Gemella morbillorum Gordonia amarae Gordonia bronchialis Gordonia rubropertincta Gordonia sputi Gordonia terrae Granulicatella adiacens Haemophilus actinomycetemcomitans Haemophilus aphrophilus Haemophilus ducreyi Haemophilus haemolyticus Haemophilus influenzae Haemophilus parahaemolyticus Haemophilus parainfluenzae Haemophilus paraphrophilus Haemophilus segnis Hafnia alvei Helicobacter cinaediOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A8 Helicobacter fennelliae Helicobacter heilmannii Helicobacter pullorum Helicobacter pylori Kingella denitrificans Kingella kingae Klebsiella granulomatis Klebsiella ornithinolytica Klebsiella oxytoca Klebsiella pneumoniae Kluyvera ascorbata Kluyvera cryocrescens Lactobacillus sp. Legionella anisa Legionella birminghamensis Legionella cherrii Legionella cincinnatiensis Legionella feeleii Legionella hackeliae Legionella jordanis Legionella lansingensis Legionella longbeachae Legionella oakridgensis Legionella pneumophila Legionella rubrilucens Legionella sainthelensi Legionella tucsonensis Legionella wadsworthii Leifsonia aquatica Leptospira borgpetersenii Leptospira inadai Leptospira interrogans Leptospira kirschneri Leptospira meyeri Leptospira noguchii Leptospira santarosai Leptospira weilii Leptotrichia buccalis Listeria ivanovii Listeria monocytogenes Listeria seeligeri Listeria welshimeri Mannheimia haemolytica Megamonas hypermegaleOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A9 Megasphaera sp. Methylobacterium mesophilicum* Methylobacterium zatmanii* Micromonas micros Moraxella atlantae Moraxella bovis Moraxella catarrhalis Moraxella caviae Moraxella cuniculi Moraxella lacunata Moraxella lincolnii Moraxella liquefaciens Moraxella nonliquefaciens Moraxella osloensis Moraxella ovis Morganella morganii Mycobacterium abscessus Mycobacterium africanum Mycobacterium asiaticum Mycobacterium avium Mycobacterium bovis Mycobacterium celatum Mycobacterium chelonae Mycobacterium conspicuum Mycobacterium fortuitum Mycobacterium genavense Mycobacterium gordonae Mycobacterium haemophilum Mycobacterium kansasii Mycobacterium leprae Mycobacterium malmoense Mycobacterium marinum Mycobacterium mucogenicum Mycobacterium peregrinum Mycobacterium porcinum Mycobacterium scrofulaceum Mycobacterium senegalense Mycobacterium shimoidei Mycobacterium simiae Mycobacterium smegmatis Mycobacterium szulgai Mycobacterium tuberculosis Mycobacterium ulcerans Mycobacterium xenopiOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A10 Mycoplasma fermentans Mycoplasma genitalium Mycoplasma hominis Mycoplasma pneumoniae Mycoplasma salivarium Myroides odoratus Neisseria cinerea Neisseria elongata Neisseria flava Neisseria flavescens Neisseria gonorrhoeae Neisseria lactamica Neisseria meningitidis Neisseria mucosa Neisseria perflava Neisseria sicca Neisseria subflava Neisseria weaveri Nocardia asteroides Nocardia brasiliensis Nocardia caviae Nocardia farcinica Nocardia nova Nocardia otitidiscaviarum Nocardia pseudobrasiliensis Nocardia transvalensis Ochrobactrum anthropi Oligella ureolytica Oligella urethralis Orientia tsutsugamushi Paenibacillus alvei Paenibacillus macerans Pantoea agglomerans Pasteurella aerogenes Pasteurella caballi Pasteurella canis Pasteurella dagmatis Pasteurella multocida Pasteurella pneumotropica Pasteurella stomatis Peptococcus niger Peptostreptococcus anaerobius Peptostreptococcus asaccharolyticusOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A11 Peptostreptococcus lactolyticus Peptostreptococcus prevotii Peptostreptococcus vaginalis Photobacterium damselae Plesiomonas shigelloides Porphyromonas asaccharolytica Porphyromonas catoniae Porphyromonas circumdentaria Porphyromonas endodontalis Porphyromonas gingivalis Porphyromonas levii Porphyromonas macacae Prevotella bivia Prevotella buccae Prevotella buccalis Prevotella corporis Prevotella dentalis Prevotella denticola Prevotella disiens Prevotella enoeca Prevotella heparinolytica Prevotella intermedia Prevotella loescheii Prevotella melaninogenica Prevotella nigrescens Prevotella oralis Prevotella oris Prevotella oulora Prevotella ruminicola Prevotella tannerae Prevotella veroralis Prevotella zoogleoformans Propionibacterium acnes Propionibacterium avidum Propionibacterium granulosum Propionibacterium propionicus Proteus mirabilis Proteus penneri Proteus vulgaris Providencia alcalifaciens Providencia rettgeri Providencia stuartii Pseudomonas aeruginosa Pseudomonas alcaligenesOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A12 Pseudomonas fluorescens Pseudomonas pseudoalcaligenes Pseudomonas putida Pseudomonas stutzeri Pseudonocardia autotrophica Pseudoramibacter alactolyticus Psychrobacter phenylpyruvicus Rahnella aquatilis Ralstonia pickettii Rhodococcus equi Rhodococcus erythropolis Rhodococcus fascians Rhodococcus rhodnii Rhodococcus rhodochrous Rickettsia africae Rickettsia akari Rickettsia australis Rickettsia conorii Rickettsia felis Rickettsia honei Rickettsia japonica Rickettsia massiliae Rickettsia prowazekii Rickettsia rickettsii Rickettsia sibirica Rickettsia typhi Rothia dentocariosa Ruminococcus productus Saccharomonospora viridis Saccharopolyspora rectivirgula Salmonella bongori Salmonella choleraesuis Salmonella enteritidis Salmonella typhi Salmonella typhimurium Sebaldella termitidis Selenomonas artemidis Selenomonas dianae Selenomonas flueggei Selenomonas infelix Selenomonas noxia Serratia ficaria Serratia marcescens Serratia odoriferaOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A13 Serratia plymuthica Serratia proteamaculans Serratia rubidaea Shigella boydii Shigella dysenteriae Shigella flexneri Shigella sonnei Sphingomonas paucimobilis Spirillum minus Staphylococcus aureus Staphylococcus epidermidis Staphylococcus haemolyticus Staphylococcus hyicus Staphylococcus intermedius Staphylococcus lugdunensis Staphylococcus saprophyticus Staphylococcus warneri Stenotrophomonas maltophilia Streptobacillus moniliformis Streptococcus acidominimus Streptococcus agalactiae Streptococcus anginosus Streptococcus bovis Streptococcus canis Streptococcus constellatus Streptococcus criceti Streptococcus equi Streptococcus gordonii Streptococcus intermedius Streptococcus milleri Streptococcus mitis Streptococcus mutans Streptococcus pneumoniae Streptococcus pyogenes Streptococcus salivarius Streptococcus sanguis Streptococcus sobrinus Streptococcus suis Streptococcus uberis Sutterella wadsworthensis Suttonella indologenes Tatlockia maceachernii Tatlockia micdadei Tatumella ptyseosOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A14 Treponema carateum Treponema pallidum Tropheryma whippelii Tsukamurella inchonensis Tsukamurella paurometabola Tsukamurella pulmonis Tsukamurella tyrosinosolvens Ureaplasma urealyticum Veillonella atypica Veillonella dispar Veillonella parvula Vibrio alginolyticus Vibrio cholerae Vibrio cincinnatiensis Vibrio fluvialis Vibrio furnissii Vibrio hollisae Vibrio mimicus Vibrio parahaemolyticus Vibrio vulnificus Wolinella succinogenes Yersinia bercovieri Yersinia enterocolitica Yersinia frederiksenii Yersinia intermedia Yersinia kristensenii Yersinia mollaretii Yersinia pestis Yersinia pseudotuberculosis Yersinia rohdei Yersinia ruckeri



### Viruses and Prions

Andes virus Apoi virus Australian bat lyssavirus Bagaza virus Bangui virus Banna virus Banzi virus Barmah Forest virus Batken virus Bayou virusOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A15 Bebaru virus Bhanja virus BK virus Black creek canal virus Borna disease virus Bovine Ephemeral Fever virus Bovine Papular Stomatitis virus Bovine Spongiform Encephalopathy (BSE) agent Buffalopox virus Bunyamwera virus Bussuquara virus Bwamba virus California encephalitis virus Candiru virus complex Caraparu virus Catu virus Cercopithecine herpes virus 1 Chandipura virus Changuinola virus Chikungunya virus Chim virus Creutzfeld-Jokob Disease (CJD) agent Colorado tick fever virus Cote d'Ivoire Ebola virus Cowpox virus Crimea-Congo Haemorrhagic Fever Virus Dakar bat virus Dengue virus Dhori virus Dobrava-Belgrade virus Dugbe virus Duvenhage virus Eastern equine encephalitis virus Edge Hill virus Encephalomyocarditis virus European bat lyssavirus 1 European bat lyssavirus 2 European Tick-borne encephalitis virus Everglades virus Eyach virus Far eastern Tick-borne encephalitis virus Foot and mouth disease virus Ganjam virus Getah virusOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A16 Guama virus Guanarito virus Guaroa virus Hantaan virus Hendra virus Hepatitis A virus Hepatitis B virus Hepatitis C virus Hepatitis delta virus Hepatitis E virus Hepatitis G virus HU39694 virus Hughes virus Human adenovirus A Human adenovirus B Human adenovirus C Human adenovirus D Human adenovirus E Human adenovirus F Human astrovirus Human Coronavirus 229E Human Coronavirus OC43 Human enterovirus 68 Human enterovirus 70 Human enterovirus A Human enterovirus B Human enterovirus C Human enterovirus D Human Herpesvirus 1 Human Herpesvirus 2 Human Herpesvirus 3 Human Herpesvirus 4 Human Herpesvirus 5 Human Herpesvirus 6 Human Herpesvirus 7 Human Herpesvirus 8 Human Immunodeficiency Virus 1 Human Immunodeficiency Virus 2 Human papillomavirus Human parainfluenza virus 1 Human parainfluenza virus 2 Human parainfluenza virus 3 Human parainfluenza virus 4 Human parechovirus type 1OW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A17 Human parechovirus type 2 Human Respiratory Syncytial virus Human Rhinovirus A Human Rhinovirus B Human T-Lymphotropic Virus 1 Igbo-ora virus Ilheus virus Influenza A virus Influenza B virus Influenza C virus Issyk-Kul virus Japanese encephalitis virus JC virus Junin virus Juquitiba virus Karshi virus Kasokero virus Kedougou virus Kemerovo virus Kokobera virus Koutango virus Kyasanur forest disease virus Laguna Negra virus Lanjan virus Lassa virus Lebombo virus Lechiguanas virus Louping ill virus Lymphocytic choriomeningitis virus Machupo virus Madrid virus Marburg virus Marituba virus Mayaro virus Measles virus Menangle virus Mimivirus *

Mokola virus Molluscum contagiosum virus Monkeypox virus Monongahela virus Mucambo virus Mumps virusOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A18 Murray Valley encephalitis virus New York virus Newcastle disease virus Nipah virus Norwalk-like viruses Nyando virus Ockelbo virus Omsk haemorrhagic fever virus O'nyong-nyong virus Oran virus Orf virus Oriboca virus Oropouche virus Orungo virus Parvovirus B19 Phnom-Penh bat virus Picobirnavirus Piry virus Poliovirus Powassan virus Pseudocowpox virus Punta Toro virus Puumala virus Quaranfil Virus Rabies virus Reovirus *

Reston Ebola virus Rift Valley fever virus Rio Bravo virus Rocio virus Ross River virus Rotavirus A Rotavirus B Rotavirus C Rotavirus D Rotavirus E Rotavirus F Royal Farm virus Rubella virus Sabia virus Saimiriine herpesvirus 1 Salehabad virus Sandfly fever Naples virusOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A19 Sandfly fever virus group Saumarez Reef virus Sealpox virus Semliki Forest virus Seoul virus Sepik virus Sin Nombre virus Sindbis virus St. Louis encephalitis virus Sudan Ebola virus Suid herpesvirus Swine vesicular disease virus Tacaiuma virus Tamdy virus Tanapox virus Tataguine virus Thogoto virus Trubanaman virus Tyuleniy virus Usutu virus Variola virus Venezuelan Equine Encephalitis virus Vesicular stomatitis virus Wad Medani virus Wanowrie virus Wesselsbron virus West Nile virus Western Equine Encephalitis virus Wyeomyia virus Yaba monkey tumor virus Yellow fever virus Yogue virus Zaire Ebola virus Zika virus Zinga virus



### Protozoa

Acanthamoeba astronyxis Acanthamoeba castellani Acanthamoeba culbertsoni Acanthamoeba hatchetti Acanthamoeba palestinensis Acanthamoeba polyphagaOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A20 Acanthamoeba rhysoides Babesia bovis Babesia divergens Babesia gibsoni Babesia microti Balamuthia mandrillaris Balantidium coli Blastocystis hominis Cryptosporidium parvum Cyclospora cayetanensis Dientamoeba fragilis Encephalitozoon cuniculi Encephalitozoon hellem Encephalitozoon intestinalis Entamoeba chattoni Entamoeba histolytica Entamoeba moshkovskii Enterocytozoon bieneusi Giardia duodenalis Isospora belli Leishmania aethiopica Leishmania amazonensis Leishmania braziliensis Leishmania chagasi Leishmania donovani Leishmania guyanensis Leishmania infantum Leishmania lainsoni Leishmania major Leishmania mexicana Leishmania naiffi Leishmania panamensis Leishmania peruviana Leishmania pifanoi Leishmania shawi Leishmania tropica Leishmania venezuelensis Naegleria fowleri Nosema africanum Nosema ceylonensis Nosema connori Nosema ocularum Pentatrichomonas hominisOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A21 Plasmodium falciparum Plasmodium knowlesi Plasmodium malariae Plasmodium ovale Plasmodium simium Plasmodium vivax Retortamonas intestinalis Sarcocystis hominis Sarcocystis lindermanni Sarcocystis suihominis Toxoplasma gondii Trachipleistophora hominis Trichomonas tenax Trichomonas vaginalis Trypanosoma brucei Trypanosoma cruzi Vittaforma corneae



### Helminths

Acanthocephalus rauschi Achillurbainia nouveli Achillurbainia recondita Alaria americana Alaria marcianae Amphimerus pseudofelineus Anatrichosoma cutaneum Ancylostoma braziliense Ancylostoma caninum Ancylostoma ceylanicum Ancylostoma duodenale Ancylostoma malayanum Anisakis physeteris Anisakis simplex Aonchotheca philippinensis Apophallus donicus Artyfechinostomum mehrai Ascaris lumbricoides Ascaris suum Ascocotyle sp. Australobilharzia terrigalensis Baylisascaris procyonis Bertiella mucronata Bertiella studeriOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A22 Bilharziella polonica Bolbosoma sp. Brugia beaveri Brugia guyanensis Brugia malayi Brugia pahangi Brugia timori Bunostomum phlebotomum Calodium hepaticum Carneocephallus brevicaea Cathaemasia cabrerai Centrocestus armatus Centrocestus formosanus Cheilospirura sp. Clinostomum complanatum Contracaecum osculatum Corynosoma strumosum Cryptocotyle lingua Cyclodontostomum purvisi Dicrocoelium dendriticum Dicrocoelium hospes Dioctophyme renale Dipetalonema arbuta Dipetalonema reconditum Diphyllobothrium cameroni Diphyllobothrium cordatum Diphyllobothrium dalliae Diphyllobothrium dendriticum Diphyllobothrium elegans Diphyllobothrium erinaceieuropaei Diphyllobothrium hians Diphyllobothrium houghtoni Diphyllobothrium klebanovskii Diphyllobothrium lanceolatum Diphyllobothrium latum Diphyllobothrium mansonoides Diphyllobothrium nihonkaiense Diphyllobothrium orcini Diphyllobothrium pacificum Diphyllobothrium scoticum Diphyllobothrium stemmacephalum Diphyllobothrium theileri Diplogonoporus balaenopterae Diplogonoporus brauniOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A23 Diplogonoporus fukuokaensis Diplostomum spathaceum Dipylidium caninum Dirofilaria immitis Dirofilaria repens Dirofilaria striata Dirofilaria subdermata Dirofilaria tenuis Dirofilaria ursi Dracunculus insignis Dracunculus medinensis Drepanidotaenia lanceolata Echinochasmus japonicus Echinochasmus jiufoensis Echinochasmus perfoliatus Echinococcus granulosus Echinococcus multilocularis Echinococcus oligarthus Echinococcus vogeli Echinoparyphium recurvatum Echinostoma cinetorchis Echinostoma echinatum Echinostoma hortense Echinostoma ilocanum Echinostoma jassyense Echinostoma macrorchis Echinostoma malayanum Echinostoma revolutum Enterobius gregorii Enterobius vermicularis Episthmium caninum Eucoleus aerophilus Eurytrema pancreaticum Eustrongylides sp. Fasciola gigantica Fasciola hepatica Fasciola indica Fasciolopsis buski Fibricola seoulensis Gastrodiscoides hominis Gigantobilharzia huttoni Gigantobilharzia sturniae Gnathostoma doloresi Gnathostoma hispidumOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A24 Gnathostoma nipponicum Gnathostoma spinigerum Gongylonema pulchrum Gymnophalloides sp. Haemonchus contortus Haplorchis pumilo Haplorchis taichui Haplorchis vanissima Haplorchis yokogawai Heterobilharzia americana Heterophyes dispar Heterophyes heterophyes Heterophyes nocens Heterophyopsis continua Himasthala muehlensi Hymenolepis diminuta Hymenolepis nana Hypoderaeum conoideum Inermicapsifer madagascariensis Isoparorchis hypselobagri Lagochilascaris minor Ligula intestinalis Loa loa Macracanthorhynchus hirudinaceus Macracanthorhynchus ingens Mammomonogamus laryngeus Mammomonogamus nasicola Mansonella ozzardi Mansonella perstans Mansonella rodhaini Mansonella semiclarum Mansonella streptocerca Marshallagia marshalli Mathevotaenia symmetrica Mecistocirrus digitatus Meningonema peruzzii Mesocestoides lineatus Mesocestoides variabilis Metagonimus minutus Metagonimus yokogawai Metastrongylus elongatus Metorchis albidus Metorchis conjunctus Microfilaria bolivarensisOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A25 Micronema deletrix Moniezia expansa Moniliformis moniliformis Multiceps brauni Multiceps glomeratus Multiceps longihamatus Multiceps multiceps Multiceps serialis Nanophyetus salmincola Necator americanus Nematodirus abnormalis Neodiplostomum sp. Oesophagostomum aculeatum Oesophagostomum bifurcum Oesophagostomum stephanostomum Onchocerca volvulus Opisthorchis (Chlonorchis) sinensis Opisthorchis felineus Opisthorchis guayaquilensis Opisthorchis noverca Opisthorchis viverrini Orientobilharzia turkestanica Ornithobilharzia sp. Ostertagia ostertagi Paragonimus africanus Paragonimus bankokensis Paragonimus caliensis Paragonimus heterotremus Paragonimus hueitungensis Paragonimus kellicotti Paragonimus mexicanus Paragonimus miyazakii Paragonimus ohirai Paragonimus phillipinensis Paragonimus sadoensis Paragonimus siamensis Paragonimus skrjabini Paragonimus uterobilateralis Paragonimus westermani Parascaris equorum Parastrongylus cantonensis Parastrongylus costaricensis Pearsonema plica Pelodera strongyloidesOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A26 Phaneropsolus bonnei Philophthalmus lacrymosus Phocanema decipiens Physaloptera caucasica Physaloptera transfuga Plagiorchis harinasutai Plagiorchis javensis Plagiorchis muris Plagiorchis philippinensis Poikilorchis congolensis Procerovum calderoni Prohemistomum vivax Prosthodendrium molenkampi Pseudamphistomum aethiopicum Pseudamphistomum truncatum Psilorchis hominis Pygidiopsis summa Pyramicocephalus anthrocephalus Raillietina celebensis Raillietina demerariensis Rhabditis elongata Rhabditis inermis Rhabditis niellyi Rhabditis pellio Rictularia sp. Schistocephalus solidus Schistosoma bovis Schistosoma haematobium Schistosoma intercalatum Schistosoma japonicum Schistosoma malayensis Schistosoma mansoni Schistosoma mattheei Schistosoma mekongi Schistosoma rodhaini Schistosoma spindale Schistosomatium douthitti Setaria equina Spirocerca lupi Stellantchasmus falcatus Stictodora fuscata Strongyloides fuelleborni Strongyloides papillosus Strongyloides ransomiOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A27 Strongyloides stercoralis Strongyloides westeri Syphacea obvelata Taenia crassiceps Taenia saginata Taenia solium Taenia taeniaeformis Teladorsagia circumcincta Ternidens deminutus Thelazia californiensis Thelazia callipaeda Thelazia rhodesii Toxascaris leonina Toxocara canis Toxocara cati Trichinella britovi Trichinella nativa Trichinella nelsoni Trichinella pseudospiralis Trichinella spiralis Trichinella T5 Trichobilharzia brevis Trichobilharzia ocellata Trichobilharzia stagnicolae Trichostrongylus affinis Trichostrongylus axei Trichostrongylus brevis Trichostrongylus calcaratus Trichostrongylus capricola Trichostrongylus colubriformis Trichostrongylus instabilis Trichostrongylus lerouxi Trichostrongylus orientalis Trichostrongylus probolurus Trichostrongylus skrjabini Trichostrongylus vitrinus Trichuris suis Trichuris trichiura Trichuris vulpis Uncinaria stenocephala Watsonius watsoni Wuchereria bancrofti Wuchereria lewisiOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A28 

### Fungi

Absidia corymbifera Acremonium alabamense Acremonium curvulum Acremonium falciforme Acremonium kiliense Acremonium potronii Acremonium recifei Acremonium roseogriseum Acremonium strictum Acrophialophora fusispora Actinomadura madurae Actinomadura pelletieri Alternaria alternata Alternaria chlamydospora Alternaria dianthicola Alternaria infectoria Alternaria longipes Alternaria stemphyloides Alternaria tenuissima Aphanoascus fulvescens Apophysomyces elegans Arthrinium phaeospermum Arthrographis kelrae * Aspergillus candidus Aspergillus clavatus Aspergillus fisherianus Aspergillus flavipes Aspergillus flavus group Aspergillus fumigatus group Aspergillus glaucus Aspergillus nidulans group Aspergillus niger Aspergillus oryzae Aspergillus terreus group Aspergillus versicolor Aspergillus wentii Aureobasidium pullulans Basidiobolus ranarum Beauveria bassiana Bipolaris australiensis Bipolaris hawaiiensis Bipolaris spiciferaOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A29 Blastomyces dermatitidis Blastoschizomyces capitatus Botryomyces caespitosus Botryosphaeria subglobosa Candida albicans Candida catenulata Candida famata Candida glabrata Candida guilliermondii Candida haemulonis Candida intermedia Candida kefyr Candida krusei Candida lambica Candida lipolytica Candida lusitaniae Candida norvegensis Candida parapsilosis Candida rugosa Candida tropicalis Candida viswanathii Candida zeylanoides Cephaliophora irregularis Cerinosterus cyanescens Chaetomium atrobtunneum Chaetomium funicola Chaetomium globosum Chaetomium perpulchrum Chaetomium strumarium Chaetophoma dermo-unguis Chlamydoabsidia padenii Chlorella protothecoides Chryosporium zonatum* Chrysonilia sitophila Cladophialophora arxii Cladophialophora bantiana Cladophialophora boppii Cladophialophora carrionii Cladophialophora devriesii Cladorrhinum bulbillosum Cladosporium cladosporioides Cladosporium elatum Cladosporium oxysporum Cladosporium sphaerosphermumOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A30 Coccidioides immitis Cokeromyces recurvartus Colletotrichum coccodes Colletotrichum dematium Colletotrichum gloeosporioides Conidiobolus coronatus Conidiobolus incongruus Conidiobolus lamprauges Coniothyrium fuckelii Coprinus cinereus Cryptococcus neoformans Cunninghamella bertholletiae Curvularia brachyspora Curvularia clavata Curvularia geniculata Curvularia lunata Curvularia pallescens Curvularia senegalensis Curvularia verucculosa Cylindrocarpon cyanescens Cylindrocarpon lichenicola Cylindrocarpon vaginae Dichotomophthora portulacae Dichotomophthoropsis nymphaerum Dissitimurus exedrus Doratomyces stemonitis Drechslera biseptata Emmonsia crescens Emmonsia parva Engyodontium album Epidermophyton floccosum Exophiala dermatitidis Exophiala jeanselmei Exophiala moniliae Exophiala pisciphila Exophiala psychrophila Exophiala salmonis Exophiala spinifera Exserohilum longirostratum Exserohilum macginnisii Fusarium aquaeductuum Fusarium chlamydosporum Fusarium dimerum Fusarium incarnatumOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A31 Fusarium moniliforme Fusarium napiforme Fusarium nivale Fusarium oxysporum Fusarium pallidoroseum Fusarium proliferatum Fusarium sacchari Fusarium solani Fusarium subglutinans Fusarium ventricosum Fusarium verticillioides Geotrichum candidum * Hansenula anomala Histoplasma capsulatum Hortaea werneckii Lasiodiplodia theobromae Lecythophora hoffmannii Lecythophora mutabilis Leptosphaeria senegalensis Leptosphaeria tompkinsii Loboa loboi Madurella grisea Madurella mycetomatis Malassezia furfur Malassezia globosa Malassezia obtusa Malassezia pachydermatis Malassezia restricta Malassezia sloofiae Malassezia sympodialis Microascus cinereus Microascus cirrosus Microsporum audouinii Microsporum canis Microsporum equinum Microsporum ferrugineum Microsporum fulvum Microsporum gallinae Microsporum gypseum Microsporum nanum Microsporum persicolor Microsporum praecox Microsporum racemosum Microsporum vanbreuseghemiiOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A32 Moniliella suavelolens Mucor circinelloides Mucor hiemalis Mucor indicus Mucor racemosus Mucor ramosissimus Myceliophthora thermophila Mycocentrospora acerina Mycoleptodiscus indicus Myriodontium keratinophilum Nannizzia cajetani Nattrassia mangiferae Neocosmospora vasinfecta Neotestudina rosatii Nigrospora sphaerica Ochroconis gallopava Oidiodendron cerealis Onychocola canadensis Ovadendron ochraceum Ovadendron sulphureo-ochraceum Paecilomyces farinosus Paecilomyces fumerosoreus Paecilomyces javanicus Paecilomyces lilacinus Paecilomyces marquandii Paecilomyces variotii Paecilomyces viridis Paracoccidioides brasiliensis Penicillium chrysogenum Penicillium citrinum Penicillium commune Penicillium decumbens Penicillium dupontii Penicillium expansum Penicillium marneffei Penicillium purpurogenum Phaeoanellomyces elegans Phaeoanellomyces werneckii Phaeosclera dematioides Phaeotrichoconis crotalariae Phialemonium curvatum Phialemonium obovatum Phialophora bubakii Phialophora pedrosoiOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A33 Phialophora repens Phialophora richardsiae Phialophora verrucosa Phoma cava Phoma cruris-hominis Phoma eupyrena Phoma glomerata Phoma herbarum Phoma hibernica Phoma minutella Phoma oculo-hominis Phyllosticta citricarpa Piedraia hortae Pleurophoma pleurospora Pneumocystis carinii Prototheca wickerhamii Prototheca zopfii Pseudoallescheria boydii Pseudomicrodochium suttonii Pyrenochaeta mackinnonii Pyrenochaeta romeroi Pyrenochaeta unguis-hominis Pythium insidiosum Rhinocladiella aquaspersa Rhinocladiella compacta Rhinocladiella obovoidea Rhinocladiella schulzeri Rhinosporidium seeberi Rhizomucor miehei Rhizomucor pusillus Rhizopus azygosporus Rhizopus microsporus Rhizopus oryzae Rhizopus stolonifer Rhodotorula glutinis Rhodotorula minuta Rhodotorula mucilaginosa Rhodotorula rubra Saccharomyces cerevisiae Saksenaea vasiformis Sarcinomyces phaeomuriformis Scedosporium prolificans Schizophyllum commune Scolecobasidium humicolaOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A34 Scolecobasidium tshawytschae Scopulariopsis acremonium Scopulariopsis asperula Scopulariopsis brevicaulis Scopulariopsis brumptii Scopulariopsis candida Scopulariopsis flava Scopulariopsis fusca Scytalidium hyalinum Scytalidium infestans Setosphaeria rostrata Sporotrichum pruinosum* Sporothrix schenckii Stachybotrys chartarum * Stemphylium macrosporoideum * Stenella araguata Streptomyces somaliensis Taeniolella exilis Taeniolella stilbaspora Tetraploa aristata Thermomyces lanuginosus Torulopsis magnoliae Trichoderma pseudokoningii Trichoderma viride Trichomaris invadens Trichophyton ajelloi Trichophyton concentricum Trichophyton equinum Trichophyton gallinae Trichophyton gourvilii Trichophyton megninii Trichophyton mentagrophytes Trichophyton rubrum Trichophyton schoenleinii Trichophyton simii Trichophyton soudanense Trichophyton tonsurans Trichophyton verrucosum Trichophyton violaceum Trichosporon asahii Trichosporon beigelii Trichosporon cutaneum Trichosporon inkin Trichosporon mucoidesOW-OGWDW Final CCL 3 Microbes: EPA 815-R-09-004 Identifying the Universe August 2009

A35 Trichosporon ovoides Tritirachium oryzae Tubercularia vulgaris Ulocladium chartarum Veronaea botryosa Verticillium nigrescens Volutella cinerescens



### * Added by EPA