# Patent

## Title
Anti-RhD monoclonal antibodies

## Abstract

Anti-RhD monoclonal antibodies and methods for the production thereof.

## Background
FIELD OF INVENTION
The present invention relates to the production and use of anti-Rhesus D mononclonal antibodies and antigen binding fragments thereof.
BACKGROUND AND PRIOR ART
Rhesus D antigen (also referred to in the art as RhD antigen, Rhesus factor, and/or Rh factor) is an antigen which may be present on the surface of human red blood cells. Those individuals whose red blood cells have this antigen are usually referred to as “RhD-positive”, while those individuals whose red blood cells do not have this antigen are referred to as “RhD-negative”.
A person who is RhD-negative and has never been exposed to the RhD antigen will not produce anti-RhD antibodies (antibodies against the RhD antigen). However, transfer of RhD-positive blood to a RhD-negative individual will lead to sensitisation (immunization) of the RhD-negative individual against the RhD antigen. This can lead to a number of complications. In particular, where a RhD-negative woman gives birth to a RhD-positive infant there is a risk of small amounts of the infant's blood entering the maternal circulation, causing the mother to produce anti-RhD antibodies. Whilst this will not normally harm the first baby, should the now immunized mother fall pregnant with another RhD positive child then maternal anti-RhD antibodies may cross the placenta and attack the infant's blood cells, leading to a condition known as haemolytic disease of the newborn (HDN).
Anti-RhD antibodies are therefore routinely administered to RhD-negative patients where there is a risk of exposure to RhD-positive blood, in order to prevent the patient from becoming immunized against the RhD-positive blood. For example, a RhD-negative patient may be given anti-RhD antibodies: prior to and/or shortly after giving birth to or having an abortion of an RhD-positive baby; after any incident during pregnancy which may have lead to bleeding across the placenta; as a routine preventative measure during pregnancy; or prior to or soon after any transfusion of blood components containing RhD-positive red blood cells.
Traditionally, the anti-RhD antibodies used have been polyclonal antibodies obtained from the blood plasma of RhD negative volunteers who have been repeatedly immunized against RhD-positive red blood cells. However, the use of polyclonal antibodies has a number of recognised drawbacks, not least of which are the continuing need for a number of volunteer donors sufficient to meet the demand for antibody, and the risk of contamination of the antibody preparation with any viruses or other pathogens that may be present in the donor's blood.
Whereas polyclonal antibodies constitute antibodies secreted by a number of different plasma cells, and thus constitute a mixture of immunoglobulin molecules secreted against a specific antigen and potentially recognising a variety of epitopes, monoclonal antibodies are produced from cells that are all clones of a single parent cell, and thus constitute a homogeneous population of antibodies, as is well known in the art. The cell lines from which monoclonal antibodies are produced are developed and cultured in-vitro, and this means monoclonal antibodies have the potential to be produced as and when required both in large amounts and at high levels of purity. Accordingly, monoclonal anti-RhD antibodies have a number of potential advantages over the polyclonal anti-RhD antibody preparations that have traditionally been used.
A number of techniques for producing human monoclonal antibodies in general, and human monoclonal anti-RhD antibodies in particular, have been described. For example, EP-A2-0251440 discloses an anti-RhD monoclonal antibody producing heterohybridoma formed by fusion of non-Ig secreting mouse mylenoma cells with an anti-RhD Ig producing population of Epstein Barr virus (EBV) transformed human lymphocytes.
U.S. Pat. No. 5,665,356 describes the production of human monoclonal anti-RhD antibodies having certain defined characteristics, produced by culturing selected EBV-transformed human B-lymphocytes.
U.S. Pat. No. 6,312,690 describes the production anti-RhD monoclonal antibodies by recombinant techniques. An EBV immortalized human cell line producing an anti-Rhesus D monoclonal antibody called D7C2 was selected. The sequences encoding the variable regions of the heavy (H) and light (L) chains of D7C2 were cloned, sequenced, and inserted into a recombinant baculovirus expression vector under the control of a strong baculovirus promoter. Insect cells transfected with the recombinant baculovirus were cultured, and the recombinant D7C2 monoclonal antibody recovered from the cell supernatant.
US-A1-2003/0175969 describes a method for preparing a anti-RhD monoclonal antibodies capable of activating effector cells expressing FcγRIII, comprising: a) purifying monoclonal antibodies obtained from cell lines selected from human B lymphocyte heterohybridomas, or recombinant animal or human cell lines (such as CHO-K, CHO-Lec10, CHO Lec-1, CHO Pro-5, CHO dhfr-, Wil-2, Jurkat, Vero, Molt-4, COS-7, HEK293, YB2/0, BHK, K6H6, NSO, SP2/0-Ag 14 and P3X63Ag8.653 cells); b) adding each antibody obtained in step a) to a different reaction mixture comprising RhD-positive red blood cells, effector cells comprising cells expressing FcγRIII, polyvalent IgGs; and c) determining the percentage lysis of the target cells and selecting the monoclonal antibodies which activate the effector cells causing significant lysis of the RhD-positive red blood cells.
U.S. Pat. No. 6,475,787 discloses a method for preparing monoclonal antibodies, in which a suitable eukaryotic host cell is transformed with a DNA sequence encoding an antibody heavy chain and a DNA sequence encoding an antibody light chain, the two sequences being linked to different amplifiable marker genes so as to allow differential amplification of the heavy and light chain DNAs in order to optimize the relative gene copy numbers of the heavy and light chain DNAs. In a preferred embodiment the host cell is a Chinese Hamster Ovary (CHO) cell which is DHFR deficient (i.e. incapable of producing dihydrofolate reductase), one of the amplifiable marker genes is an adenosine deaminase (ADA) gene, and the other is a DHFR gene. Amplification of the DNA encoding one antibody chain and linked in the ADA gene can then be achieved by treating the recombinant cells with increasing concentrations of 2′-deoxycoformycin, whilst amplification of the DNA encoding the other antibody chain and linked in the DHFR gene is achieved by treating the cell with increasing concentrations of methotrexate (MTX).
Nevertheless, there remains a need for further anti-RhD monoclonal antibodies and methods for the production thereof.
DESCRIPTION OF THE INVENTION
According to a first aspect of the present invention there is provided an isolated anti-RhD monoclonal antibody comprising:
a) a heavy chain variable region having first, second and third CDRs (complementarity determining regions) which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 2, and a light chain variable region having first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 4; or
b) a heavy chain variable region having first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 6, and a light chain variable region having first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 8; or
c) a heavy chain variable region having first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 10, and a light chain variable region having first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 12.
As used herein, the term “anti-RhD antibody” refers to both whole antibodies and to fragments thereof that have binding specificity for RhD antigen. The binding affinity/specificity of an antibody can be measured by a various assays, as will be known to and can be routinely implemented by one of ordinary skill in the art. For example, antibodies recognising and specifically binding to RhD antigen can be determined using one or more standard techniques as known to one of ordinary skill in the art, such as but not limited to: EIA/ELISA techniques, such as competitive EIA (enzyme linked-immunoassay); flow cytometry; and/or ADCC (antibody-dependant cellular toxicity) assays. Exemplary competitive EIA, flow cytometry, and ADCC techniques are described in further detail in the Examples that follow.
As is well known in the art, whole antibodies are typically formed of one or two heavy and one or two light chains. The heavy and light chains each comprise a variable region and a constant region. The variable regions (also referred to as the variable domains) dictate the antibody's antigen binding specificity. Each variable domain is composed of complementarity determining regions (CDRs, of which there are typically three, designated CDR1, CDR2 and CDR3) interspersed with more conserved regions known as framework regions. On folding of the antibody to adopt the correct quaternary structure, the CDRs of a heavy and light chain together form the antigen binding site. The constant region of the heavy chain is composed of three or more constant domains and is dependent on the class (eg. IgA, IgD, IgE, IgG, or IgM) and isotype (eg. IgA1, IgA2, IgG1, IgG2, IgG3, IgG4) of the antibody. It is identical in all antibodies of the same class and isotype, but differs in antibodies of different isotypes. The light chain constant region is composed of a single constant domain of which is of one of two isotypes, kappa or lambda, and is likewise identical in all antibodies of the same isotype. The constant regions of the antibodies typically mediate binding of the antibody to host tissues or factors.
Antibody fragments according to the present invention typically include at least the CDRs and sufficient of the framework regions to specifically bind the antigen. Exemplary types of fragment include, but are not limited to, a Fab′ fragment (consisting of the variable domain and a constant domain of both the light and heavy chains), a F(ab′)2 fragment (two Fab′ fragments linked by a disulfide bridge at the hinge region), a Fv fragment (consisting of the variable domains only of the light and heavy chains), and other types of fragment as known to one skilled in the art.
SEQ ID NOs: 2 and 4 are the amino acid sequences of the heavy and light chains of the anti-RhD monoclonal antibody referred to herein as RhD1 and described below in further detail. SEQ ID NOs: 6 and 8 are the amino acid sequences of the heavy and light chains of the anti-RhD monoclonal antibody referred to herein as RhD2 and described below in further detail. SEQ ID NOs: 10 and 12 are the amino acid sequences of the heavy and light chains of the anti-RhD monoclonal antibody referred to herein as RhD3 and described below in further detail.
The antibodies according to the first aspect of the present invention therefore comprise heavy chain and light chain variable regions having first second and third complementarity determining regions (i.e. CDR1, CDR2 and CDR3) which are identical or substantially identical to the first second and third complementarity determining regions (CDR1, CDR2 and CDR3) of antibody RhD1, RhD2 or RhD3.
As used herein, two CDRs are “substantially identical” if they have amino acid sequences that preferably are at least 80% identical and/or differ in no more than one amino acid. More preferably the sequences are at least 90% identical and/or differ in no more than one amino acid. Preferably, where amino acid substitutions occur such substitutions are conservative substitutions. Where the CDRs of two antibodies are at least substantially identical, it is reasonable to predict that the resulting antigen binding site of the two antibodies will have similar antigen binding properties. For example, antibodies RhD1 and RhD2 have highly similar CDRs, as can be seen from FIGS. 1 and 2 (described below in further detail), and both have high binding affinity for the RhD antigen.
Most preferably, the CDRs of the antibody are identical to those of RhD1, RhD2 or RhD3.
As used herein the term “an isolated monoclonal antibody” refers to an antibody which has been produced by monoclonal techniques and which has been isolated from antibodies of other types. In other words, the only other antibodies present will be antibodies produced by cells of the same cell line (i.e. cells all originating from the same single parent cell) as the cell which produced the monoclonal antibody. This is of course in contrast to, for example, polyclonal antibodies where the antibodies constitute a mixture of different antibodies originating from different plasma cells.
In a preferred embodiment, the isolated anti-RhD monoclonal antibody comprises heavy and light chain variable regions which are at least 80%, more preferably at least 90%, more preferably at least 95%, more preferably at least 98%, most preferably 100% identical to the respective variable regions of the heavy and light chains of the RhD1, RhD2 or RhD3 antibody to which its CDRs are at least substantially identical. Thus, in this embodiment the antibody comprises either:
a) a heavy chain variable region which is at least 80%, 90%, 95%, 98%, or 100% identical to the variable region of SEQ ID NO: 2 and has first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 2, and a light chain variable region which is at least 80%, 90%, 95%, 98%, or 100% identical to the variable region of SEQ ID NO: 4 and has first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 4; or
b) a heavy chain variable region which is at least 80%, 90%, 95%, 98%, or 100% identical to the variable region of SEQ ID NO: 6 and has first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 6, and a light chain variable region which is at least 80%, 90%, 95%, 98%, or 100% identical to the variable region of SEQ ID NO: 8 and has first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 8; or
c) a heavy chain variable region which is at least 80%, 90%, 95%, 98%, or 100% identical to the variable region of SEQ ID NO: 10 and has first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 10, and a light chain variable region which is at least 80%, 90%, 95%, 98%, or 100% identical to the variable region of SEQ ID NO: 12 and has first, second and third CDRs which are identical or substantially identical to the respective first, second, and third CDRs of SEQ ID NO: 12.
Techniques for identifying antibody variable regions and CDRs, comparing and aligning amino acid sequences, and determining the % identity between two amino acid sequences are well known in the art. For example, the CDRs, variable regions, and constant regions of an antibody can be determined using software such as IMGT/V-QUEST tool (http://imgt.cines.fr/IMGT_vquest/share/textes/) using default settings, and/or via comparison with databases of known immunoglobulin sequences such as IMGT/GENE-DB (http://imgt.cines.fr/IMGT_GENE-DB/GENE1ect?livret=0) or V-BASE (http://vbase.mrc-cpe.cam.ac.uk/). Amino acid or nucleic acid sequence sequences, whether for whole antibodies or specific parts thereof, can be aligned and their % identity determined using ClustalW (http://www.ebi.ac.uk/Tools/clustalw/), ClustalW2 (http ://www. ebi. ac.uk/Tools/clustalw2/) or GAP (http://genome.cs.mtu.edu/align/align.html) using default parameters, or using proprietary software such as Vector NTI v.10.3.
In a preferred embodiment, the antibody further comprises a light chain constant domain and at least one heavy chain constant domain. The light chain constant domain may be of either the kappa or lambda type. The heavy chain constant domain is preferably an IgG class constant domain. Thus, in this embodiment the antibody may for example be a Fab′ or F(ab′)2 fragment, as discussed above, or it may be a whole antibody. If the latter, preferably all the heavy chain constant domains are IgG domains (i.e. the antibody comprises an IgG heavy chain constant region). In a particularly preferred embodiment the constant domain or region is an IgG 1 or IgG 3 constant domain or region. Preferably all constant domains (both light and heavy) are human constant domains.
According to a second aspect of the present invention, there is provided an isolated polynucleotide encoding the light and/or heavy chain of an antibody according to the first aspect.
As used herein, the term an “isolated polynucleotide” refers to a polynucleotide that has been isolated from a cellular environment (i.e. it is not present in a cell or organism), and it can be in purified form (i.e. substantially free of other polynucleotides, proteins, and cellular components) of form part of composition containing other polynucleotides and/or compounds. The term “encoding a light chain” refers not only to sequences encoding whole light chains, but also to sequences encoding fragments thereof (such as the variable domain only) where the antibody to be expressed is an antibody fragment as described above. Similarly, the term “encoding a heavy chain” refers not only to sequences encoding whole heavy chains, but also to sequences encoding fragments thereof (such as the variable domain only or the variable domain plus one or more but not all of constant domains) where the antibody to be expressed is an antibody fragment as described above.
Exemplary nucleic acid sequences include the relevant coding sequences of SEQ ID NOs: 1, 3, 5, 7, 9, and 11, which sequences are the coding sequences for, respectively, amino acid SEQ ID NOs: 2, 4, 6, 8, 10, and 12. Thus, for example, if the antibody comprises identical variable regions to the variable regions of SEQ ID NOs: 2 and 4 (the heavy and light chains of the anti-RhD antibody designated RhD1), then an exemplary nucleic acid sequence could comprise the sections of SEQ ID NOs: 1 and 3 that encode said variable regions. Alternatively, such nucleic acid sequences could be modified for optimised expression (i.e. transcription and/or translation) in the desired host cell, for example via techniques known to one of skill in the art. For example, optimization of the native nucleic acid sequence may comprise one or more of: optimizing the GC distribution, and AT/GC stretches (to enhance the stability of mRNA); removing inhibitory motifs (such as premature polyA signals); removing cryptic splice sites (to prevent alternative, incorrect splicing of mRNA); optimizing mRNA secondary structure (to avoid tight hairpins possibly stalling translation); optimizing open reading frames (to avoid secondary or alternative reading frames); and optimizing codon usage (to avoid rare codons that can slow down translation).
According to a third aspect of the present invention, there is provided an expression system comprising one or more expression vectors and including coding sequences encoding the light and heavy chains of an antibody according to the first aspect.
The expression vector(s) may be of any type used in the art, such as for example plasmids and viral vectors. The expression vectors of the present invention are preferably plasmids. In addition to the antibody chain coding sequences, the vector(s) will include the necessary regulatory sequences for proper transcription and translation of the coding sequences in the intended host cell, such as for example a suitable promoter and polyadenylation (polyA) sequence. The vector(s) may further comprise a Kozak sequence for increased efficiency of expression, and/or a sequence encoding for a signal peptide for post translational transport of the antibody chains (for example for secretion of the antibodies). A further preferred feature is the presence of one or more antibiotic resistance genes and/or other forms of selection marker, allowing for selection of cells that have been stably transfected with the vector, and/or that display stronger expression of the antibody coding sequences, as discussed below in more detail.
The promoters and poly(A) sequences used to drive expression of the light and heavy chain coding sequences may be of any type used in the art. A variety of different promoters and poly(A) sequences are known, the selection of appropriate promoters and poly(A) sequences for use in the chosen host cell being well within the abilities of one of ordinary skill in the art. For example, suitable promoters for use in a mammalian host cell include the SV40 early and late, elongation factor 1 (EF-1), and cytomegalovirus (CMV) promoters. Suitable poly(A) sequences include those from SV40 poly(A), bovine growth hormone (BGH), thymidin kinase (TK), and human growth hormone (hGH). In a preferred embodiment, the light and heavy chain coding sequences are driven by the human elongation factor 1 alpha (hEF-1α) promoter and BGH poly(A) sequence.
In one embodiment, the expression system comprises an expression vector that includes both the coding sequence for the light chain and the coding sequence for the heavy chain.
In an alternative embodiment, the light and heavy chain coding sequences are carried by separate vectors, the expression system comprising:
a first expression vector including the coding sequence encoding the light chain; and
a second expression vector including the coding sequence encoding the heavy chain.
In this embodiment, one or both of said first and second expression vectors may include a dihydrofolate reductase (dhfr) selection marker. This marker comprises a coding sequence for DHFR, which is coupled to suitable promoter and polyadenylation sequences, preferably the SV40 early (SV40E) promoter and poly(A) sequences. DHFR allows de novo synthesis of the DNA precursor thymidine. Therefore, by transfecting a host cell-line which is DHFR deficient (i.e. which is itself incapable of producing DHFR), one can then select for cells which have stably integrated the vector into their genome by growing the cells in a medium deficient in deoxyribonucleosides and ribonucleosides. Moreover, once the successfully transfected cells have been isolated, the expression of the desired coding sequence(s) (i.e. the light and/or heavy chain) can be amplified by using the DHFR inhibitor methotrexate (MTX), which causes some cells to react by amplifying large regions of DNA surrounding the dhfr gene.
In a preferred embodiment, one of said first and second expression vectors includes an antibiotic resistance gene (a nucleic acid sequence that imparts resistance to the antibiotic in question) but does not include the DHFR coding sequence, and the other of said expression vectors includes the DHFR coding sequence but does not include a gene providing resistance to the same antibiotic as said antibiotic resistance gene. The antibiotic resistance gene may be of any type used in the art. For example, suitable antibiotic resistance genes for imparting resistance to a mammalian host cell include: aminoglycoside (e.g. neomycin, hygromycin B) resistance genes, such as neomycin phosphotransferase (npt) and hygromycin B phosphotransferase (hpt, hph); aminonucleoside (eg. puromycin) resistance genes such as puromycin N-acetyltransferase (pac); glycopeptide (eg. bleomycin, phleomycin) resistance genes such as the ble gene; and peptidyl nucleoside (eg. blasticidin) resistance genes such as the bls, bsr or bsd genes. As with the dhfr selection marker, the antibiotic resistance gene may as needed be coupled to any suitable promoter and polyadenylation sequences. Preferred are the SV40 early (SV40E) promoter and poly(A) sequences.
In a particularly preferred embodiment, the antibiotic resistance gene comprises a neomycin phosphotransferase (NPT) coding sequence. The cells stably transfected with the vector including the NPT coding sequence can then be selected for by growing the cells in a medium containing neomycin, or a neomycin analog such as G418, the toxic effects of which are neutralized by NPT.
Thus, the above described embodiment, in which one vector has the dhfr selection marker and the other has the antibiotic selection gene, allows for selection of only those cells which have stably integrated both vectors into their genome by growing the cells in a medium deficient in deoxyribonucleosides and ribonucleosides and containing the relevant antibiotic (such as neomycin or a suitable analogue where the antibiotic resistance gene is the npt gene). Cells that were not transfected or were transfected with only one plasmid will not survive the selection process. Moreover, because the co-transfected plasmids often integrate into one spot of the genome, subsequent growth of the successfully transfected cells in increasing concentrations of MTX can still be used to effectively amplify expression of the antibody chains encoded by both vectors (i.e. to amplify expression of both the heavy and light chain sequences).
It should be noted that while, in this embodiment, the vector carrying the dhfr selection marker does not include a gene providing resistance to the same antibiotic as the antibiotic resistance gene carried by the other vector, it and indeed both vectors may further comprise a different antibiotic resistance gene providing resistance against a further antibiotic. Again, the additional antibiotic gene may be of any type used in the art. For example, where one but not both vectors carries an NPT coding sequence (providing resistance against neomycin and analogues thereof) both vectors may usefully additionally comprise an ampicillin resistance (AmpR) gene, for the purpose of providing ampicillin resistance when incorporated into a bacterial host cell. Other antibiotic resistance genes that are commonly used to impart resistance in bacterial hosts include: βlactamase genes (providing resistance to βlactam antibiotics such as ampicillin and other penicillins), such as TEM-1 β-lactamase; genes providing resistance to aminoglycosides such as streptomycin, kanamycin, tobramycin, and amikacin; and tetracycline (e.g. tetracycline, doxycycline, minocycline, oxtetracycline) resistance genes, such as the tetA genes.
According to a fourth aspect, the present invention provides a cell transformed with an expression system according to the third aspect or fourth aspects.
The host cells for use in the present invention may be of any suitable type. However, in a preferred embodiment the host cell (cell to be transfected) is a eukaryotic cell, more preferably a vertebrate cell, most preferably a mammalian cell. A variety of suitable mammalian host cells are available, such as are for example listed in US-A1-2003/0175969 referred to above. Preferred mammalian host cells include: all variants of CHO cells, such as CHO K1 and dhfr-deficient CHO (DG44, DXB11); HEK293; BHK; COS-1 and COS-7; NSO; and PER.C6. The preferred host cells are Chinese Hamster Ovary (CHO) cells, in particular dhfr-deficient CHO cells (dfhr-CHO cells). The host cells may be transfected with the expression vectors using standard techniques and transfection conditions, such as are known in the art. Exemplary transfection conditions are provided in the Examples that follow.
According to a fifth aspect, the present invention provides a method of manufacturing monoclonal antibodies, comprising cultivating recombinant cells according to the fourth aspect, and recovering the monoclonal antibody from the culture medium. Exemplary growth media and conditions are provided in the Examples that follow, but any suitable growth conditions and commercial or custom growth media can be used, as are routinely employed in the art. Likewise, any standard technique for purifying secreted antibodies from growth media can be employed, exemplary techniques being again outlined below.
According to a sixth aspect, the present invention provides a pharmaceutical composition comprising a monoclonal antibody according to the first aspect. Preferably, the pharmaceutical composition also comprises a pharmaceutically acceptable carrier.
The monoclonal antibodies can be formulated as desired dependent on the intended route of administration. For example, the monoclonal antibodies may be formulated for injection (for example intra-muscularly) analogous to conventional polyclonal anti-D formulations. Exemplary dosages range from 150 to 300 micrograms (as measured by agglutination titer, as described below in further detail). Exemplary carriers include: phosphate-buffered saline; and glycine saline buffer.
The composition may comprise monoclonal antibodies of a single type only (i.e. the only antibodies present in the composition are antibodies produced by cells of the same cell line). Alternatively, the composition may comprise a combination of more than one type of monoclonal antibody. For example, the composition could comprise two or more distinct types of monoclonal antibodies that are in accordance with the first aspect of the invention, such as a combination of two or all three of monoclonal antibodies RhD1, RhD2 and/or RhD3. Alternatively or additionally, the composition could comprise, in addition to monoclonal antibodies according to the first aspect of the present invention, other anti-RhD monoclonal antibodies as for example are known from the art. In a preferred embodiment, the composition comprises at least one monoclonal antibody that has an IgG 1 constant domain or region, and at least one monoclonal antibody that has an IgG 3 constant domain or region.
Where the composition comprises a combination of more than one type of monoclonal antibody, it is preferred that the composition comprises no more than 50 different types of monoclonal antibody. More preferably, the composition comprises at most 25, 20, 15, 10 or 5 different types.
According to a seventh aspect, the present invention provides a method of inhibiting or preventing immunization of a RhD-negative human patient against RhD-positive blood, comprising administering a prophylactically effective amount of a monoclonal antibody according to the first aspect or pharmaceutical composition according to the sixth aspect.
Specific indications and/or circumstances in which the monoclonal antibodies may be administered correspond to those for which the existing anti-RhD polyclonal antibodies are administered.
According to an eighth aspect, the present invention provides a monoclonal antibody according to the first aspect, or a pharmaceutical composition according to the sixth aspect, for use in a method of inhibiting or preventing immunization of a RhD-negative human patient against RhD-positive blood.
According to a ninth aspect, the present invention provides the use of a monoclonal antibody according to the first aspect in the manufacture of a medicament for inhibiting or preventing immunization of a RhD-negative human patient against RhD-positive blood.



The invention is further illustrated in the following non-limiting Examples, with reference also to the accompanying drawings in which:
FIG. 1 is an alignment of amino acid sequences of the heavy chains of monoclonal antibodies RhD1, RhD2 and RhD3, in which the variable regions have been underlined and the complementarity determining regions highlighted in bold and shaded;
FIG. 2 is an alignment of amino acid sequences of the light chains of monoclonal antibodies RhD1, RhD2 and RhD3, in which the variable regions have been underlined and the complementarity determining regions highlighted in bold;
FIG. 3 is a map of plasmid vector pCB3;
FIG. 4 is a map of plasmid vector pCB11;
FIG. 5 is a map of pCB3 containing an anti-RhD antibody heavy chain (RhD HC) coding sequence; and
FIG. 6 is a map of pCB11 containing an anti-RhD antibody light chain (RhD LC) coding sequence;
FIG. 7 is an example of a dose-response curve generated in an ADCC assay, in which cytotoxicity is plotted against the logarithm of antibody concentration at which the erythrocytes were presensitized; and
FIG. 8 is an example of linear regression performed on the relevant data points taken from FIG. 7.



Sequence listings which are 48 in number are provided after the Drawings.
The Sequence listings are also provided separately in accompanying CD in electronic form.
EXAMPLES
Isolation of Peripheral Blood Mononuclear Cells (PBMCs) and B Cells from Peripheral Blood of Healthy Volunteers Hyperimmunized with Rhesus D (RhD)-Positive Red Blood Cells
Blood from healthy RhD-negative volunteers repeatedly immunized with red blood cells isolated from healthy RhD-positive individuals of the same ABO blood group was sourced from Cliniqa. Within four weeks after the last immunization the anti-RhD titer in serum was checked, the volunteers were bled, their peripheral blood mononuclear cells (PBMCs) were separated from other blood cell populations by Ficoll-Hypaque (Pharmacia) gradient centrifugation, and the cells were either used fresh or cryopreserved for later use. T cells were routinely depleted by rosetting with 2% S-(2-Aminoethyl)isothiouronium bromide hydrobromide (AET)-treated sheep red blood cells and the resulting enriched B cells were transformed by Epstein-Barr virus (EBV).
EBV Transformation
Since EBV activation has been shown to be advantageous for subsequent fusion of human B cells with the respective fusion partner, enriched B cells were transformed by EBV using spent supernatant from the B95-8 marmoset cell line as a source of the virus. The B cells resuspended in a complete IMDM medium (Gibco) with 30% fetal calf serum (FCS) were seeded in 96-well plates at a concentration between 5×103 and 2.5×104 cells/well. The B95-8 supernatant was added to the wells in an amount ranging from 5% to 40% of the total volume. The plates were incubated in a humidified 5% CO2 incubator at 37° C. for two to four weeks before screening.
Screening of Plates for Transformants Secreting Anti-RhD Antibodies
Supernatants of transformed B cells were screened for the presence of anti-RhD antibodies by competitive enzyme-linked immunoassay (EIA). The principle of the test is as follows: a labeled monoclonal anti-RhD reference antibody of known binding affinity and specificity (Brad-5; NIBSC) competes with an unlabeled antibody (in this case, the secreted antibodies in the supernatants) for binding to RhD-positive erythrocytes. An inhibition of the reference monoclonal antibody (mAb) binding indicates the presence of RhD-specific antibodies that bind to the same immunodominant epitope as the reference mAb. The degree of inhibition of the reference mAb binding correlates to the concentration and affinity of the interfering antibodies.
RhD-positive erythrocytes (R2R2 haplotype; ImmucorGamma) treated with papain were fixed with glutaraldehyde and immobilized on the bottom of 96-well flat-bottom test plates. After extensive washing and blocking of the plates, the supernatants from transformed B cells, the standards, and negative controls were added to the wells and the plates were incubated for 30-60 min at room temperature (RT). The plates were washed three times. The biotinylated reference mAb was added and the plates were incubated for 30 more minutes at RT. The plates were washed again and incubated with a secondary reagent, ExtrAvidin-Alkaline Phosphatase conjugate (Sigma) for 30 min at RT. After another washing step, Sigma Fast PNPP (p-Nitrophenyl Phosphate) substrate (Sigma) was added. When the color developed sufficiently, the reaction was stopped with 3N NaOH and the binding of the reference mAb was detected by reading the optical densities (at 405 nm) on a plate reader (Bio-Rad). The data was analyzed with a software package supplied with the plate reader.
Cell Fusion
Because human B cells transformed with EBV are unstable and can rapidly cease to produce antibodies, fusion with a suitable fusion partner is usually necessary to prolong their lifetime and enable their subcloning. Therefore, any cultures of transformed B cells that produced antibodies inhibiting binding of the biotinylated reference antibody to RhD+ erythrocytes as assessed by EIA (see above) were fused to a human heterohybridoma K6H6/B5 either by the standard polyethylene glycol (PEG) method or by electrofusion. The electrofusion was performed with the electrofusion apparatus (Eppendorf Multiporator) and an electrofusion buffer (Eppendorf) according to manufacturer's protocols.
Subcloning of Hybridomas
Subclones were grown on feeder layers established from newborn foreskin fibroblast line CCD-1114Sk (ATCC). Feeders were maintained in IMDM media containing 2-20% fetal bovine serum (FBS), depending on cell growth. Feeder trays were treated with UV light on the day of subcloning. The cell lines to be subcloned were counted, the appropriate dilutions to plate approximately 0.3 cells/well were prepared, and the cell suspensions were pipetted into the 96-well plates containing the feeder layer. Each cell line was seeded in at least two plates. The cultures were fed every 3-4 days. The supernatants from wells exhibiting growth of hybridomas were tested by EIA usually in 3-4 weeks.
Hybridoma Clones Selected for Development of Recombinant Cell Lines
Hybridoma clones selected for development of recombinant antibodies are listed in Table 1 (below). Each clone was assigned a simplified designation for the purpose of recombinant cell line development.







TABLE 1







Designation of Anti-RhD Antibodies









Hybridoma clone:
Antibody isotype:
Clone designation:





SD30.06.F5.1G2
human IgG1, lambda
RhD1


SD30.02.C3.3D11
human IgG1, lambda
RhD2


SD412.04.G11.2D10
human IgG3, kappa
RhD3









RNA Isolation

Total RNA from the hybridoma cells was purified using Trizol reagent (Invitrogen) according to the protocol suggested by the manufacturer with the additional step of RNA extraction with chloroform to remove traces of phenol. Spectrophotometrical RNA quantification was carried out at 260 nm assuming 1 OD to be equivalent to 40 ug/ml RNA.
First Strand Synthesis
The first strand of cDNA was synthesized using the Super Script III First-Strand System for RT-PCR (Invitrogen) according to the protocol suggested by the supplier. Oligo d(T) primer from the kit was used in all cases to prime the reactions.
RNA Hydrolysis
The removal of RNA molecules from reverse transcription reaction was carried out by RNaseH digestion (Super Script III First-Strand System for RT-PCR) according to manufacturer's instructions. First-strand cDNA was cleaned using QIAquick PCR Purification Kit (Qiagen).
Tailing of First-Strand cDNA
To facilitate amplification of first-strand cDNA with unknown 3′ sequence, poly(A) tail was appended to the 3′ end of each cDNA to create a defined priming site. For this purpose, recombinant Terminal Deoxynucleotidyl Transferase (Invitrogen) was used. The reaction was carried out according to manufacturer's recommendations. Reaction product was cleaned using QIAquick PCR Purification Kit (Qiagen).
PCR Amplification of Ig Heavy-(HCs) and Light Chains (LCs)
The primers (SEQ ID NOs: 13 to 19) used for PCR amplification of the heavy and light chain coding sequences from the first-strand cDNA are listed below (EcoRI restriction sequence in each primer is underlined).
Forward primer (compatible with the poly(A) extension of the first strand of cDNA):









For all chains:



5′-GACTGAATTCTTTTTTTTTTTTTTTTTTTTV-3′



 



Reverse primers (gene specific):



For gamma chains:



5′-ACTGGAATTCGGTGCTTTATTTCCATGCTGG-3′



 



5′-ACTGGAATTCGTACGTGCCAAGCATCCTCG-3′



 



For kappa chains:



5′-ACTGGAATTCAGAGGCCAAAGGATGGGAGG-3′



 



5′-GACTGAATTCCTGGAACTGAGGAGCAGGTGG-3′



 



For lambda chains:



5′-GACTGAATTCCCTGGGATCCTGCAGCTC-3′



 



5′-ACTGGAATTCGGGGTGAGGGTTGAGAACC-3′






PCR was carried out using PfuUltra High-Fidelity thermostable DNA-polymerase (Stratagene). Typically the first five cycles were primed only with the forward primer; annealing temperature was 45° C. After that, the reverse, gene-specific primer was added and the PCR was extended for another 30-35 cycles at annealing temperature of 50-65° C. Resulting fragments were gel purified using QIAquick Gel Extraction Kit (Qiagen), subcloned into pBluescript cloning vector and sequenced.
Subcloning of PCR Products into pBluescript Cloning Vector
The purified PCR products were ligated using the Quick Ligation Kit (NEB) into pBluescript cloning vector (Stratagene) cut with EcoRV. DH5α bacterial cells were transformed with the resulting DNA and spread onto LB plates supplemented with 40 μg/ml ampicillin and pre-treated with 50 μl of 20 mg/ml Xgal and 25 μl of 200 mg/ml Isopropyl β-D-1-thiogalactopyranoside (IPTG). Colonies were blue/white selected for the presence of an insert.
Isolation of Plasmid DNA and Sequencing
Selected white colonies were picked and expanded. The DNA was isolated with QIAprep Spin Miniprep Kit (Qiagen). A control digest was performed with EcoRI (both forward and reverse PCR primers contained an EcoRI site). Inserts in plasmids yielding the expected digestion pattern were sequenced (Biotech Core).
RhD1, RhD2 and RhD3 Coding and Amino Acid Sequences
The amino acid sequences of the heavy chain (HC) and light chain (LC) of RhD1, RhD2 and RhD3, and the corresponding nucleotide sequences encoding said heavy and light chains are set out in the accompanying sequence listing, as further explained below.
The sequences were analyzed with the help of IMGT databases and software (imgt.cines.fr). More specifically: the sequences of constant regions were determined from the IMGT/GENE-DB database of genomic Ig sequences (http://imgt.cines.fr/IMGT_GENE-DB/GENE1ect?livret=0), by selecting the species, locus, gene type, group (skipped subgroup) and functionality (e.g. species: Homo sapiens, locus: IGH, gene type: constant, group: IGHC, functionality: functional), and searching the database - from the resulting list, the desired isotype (e.g. IGG1) was selected in order to identify appropriate IMGT/LIGM-DB reference sequence(s) for comparison with the RhD sequence; the variable regions were determined by subtracting the constant regions; and the CDRs were determined using IMGT/V-QUEST tool (http://imgt.cines.fr/IMGT _vquest/share/textes/), by selecting the immunoglobulin species (human), uploading the nucleotide sequence of the complete antibody chain, or just its variable region, in FASTA format, and analyzing the sequence using IMGT/V-QUEST default settings.
For further information on IMGT/V-QUEST tool and IMGT/GENE-DB see also:
Lefranc M.-P., Giudicelli V., Kaas Q., Duprat E., Jabado-Michaloud J., Scaviner D., Ginestoux C., Clement 0., Chaume D. and Lefranc G. IMGT, the international ImMunoGeneTics information system. Nucl. Acids Res., 2005, 33, D593-D597;
Giudicelli V., Chaume D. and Lefranc M.-P. IMGT/V-QUEST, an integrated software for immunoglobulin and T cell receptor V-J and V-D-J rearrangement analysis. Nucl. Acids Res. 2004, 32, W435-W440; and
Giudicelli V., Chaume D. and Lefranc M.-P. IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucl. Acids Res. 2005, 33, D256-D261.
V-BASE (a database of all human germline variable region sequences; http://vbase.mrc-cpe.cam.ac.uk/) can also be used to determine, or corroborate, the ends of a variable region. Under Alignments, one can find germline sequences of the signal peptides, V-segments, D-segments (if applicable), and J-segments of all heavy and light chains. It will be apparent from the IMGT analysis what segments are employed in a given antibody chain. One can then reference the particular J-segment in V-BASE to determine the exact ending.
SEQ ID NO: 1 is the nucleotide sequence of the coding region of RhD1 HC. Nucleotides 1-57 encode the signal peptide. Nucleotides 58-448 encode the variable region, of which nucleotides 133-156 encode CDR1, nucleotides 208-231 encode CDR2, and nucleotides 346-414 encode CDR3. Nucleotides 449-1437 encode the constant region (this being a gamma1, or IgG1, constant region). The amino acid sequence of RhD1 HC is given as SEQ ID NO: 2.
SEQ ID NO: 3 is the nucleotide sequence of the coding region of RhD1 LC. Nucleotides 1-57 encode the signal peptide. Nucleotides 58-388 encode the variable region, of which nucleotides 133-159 encode CDR1, nucleotides 211-219 encode CDR2, and nucleotides 328-357 encode CDR3. Nucleotides 389-705 encode the constant region (this being a lambda constant region). The amino acid sequence of RhD1 LC is given as SEQ ID NO: 4.
SEQ ID NO: 5 is the nucleotide sequence of the coding region of RhD2 HC. Nucleotides 1-57 encode the signal peptide. Nucleotides 58-448 encode the variable region, of which nucleotides 133-156 encode CDR1, nucleotides 208-231 encode CDR2, and nucleotides 346-414 encode CDR3. Nucleotides 449-1437 encode the constant region (this being a gamma1, or IgG1, constant region). The amino acid sequence of RhD2 HC is given as SEQ ID NO: 6.
SEQ ID NO: 7 is the nucleotide sequence of the coding region of RhD2 LC. Nucleotides 1-57 encode the signal peptide. Nucleotides 58-388 encode the variable region, of which nucleotides 133-159 encode CDR1, nucleotides 211-219 encode CDR2, and nucleotides 328-357 encode CDR3. Nucleotides 389-705 encode the constant region (this being a lambda constant region). The amino acid sequence of RhD2 LC is given as SEQ ID NO: 8.
SEQ ID NO: 9 is the nucleotide sequence of the coding region of RhD3 HC. Nucleotides 1-57 encode the signal peptide. Nucleotides 58-448 encode the variable region, of which nucleotides 133-162 encode CDR1, nucleotides 214-234 encode CDR2, and nucleotides 349-414 encode CDR3. Nucleotides 449-1578 encode the constant region (this being a gamma3, or IgG3, constant region). The amino acid sequence of RhD3 HC is given as SEQ ID NO: 10.
SEQ ID NO: 11 is the nucleotide sequence of the coding region of RhD3 LC. Nucleotides 1-66 encode the signal peptide. Nucleotides 67-391 encode the variable region, of which nucleotides 145-162 encode CDR1, nucleotides 214-222 encode CDR2, and nucleotides 331-360 encode CDR3. Nucleotides 392-711 encode the constant region (this being a kappa constant region). The amino acid sequence of RhD3 LC is given as SEQ ID NO: 12.
Alignments of Amino Acid Sequences of RhD1-RhD3
The amino acid sequences of RhD1-RhD3were aligned with the ClustalW program (www.ebi.ac.uk/Tools/clustalw), using the default parameters from the website. The resulting alignments of HCs and LCs are depicted in FIGS. 1 and 2, respectively. The variable region of each sequence has been underlined, and the CDRs highlighted in bold (the first occurring CDR, reading the sequences left to right and top to bottom, being CDR1, the second being CDR2, and the third being CDR3). Where the same amino acid occurs in all three chains as aligned, this is identified by a “*” below the relevant amino acid in the bottom sequence (that of RhD3).
Similarly, GAP (http://genome.cs.mtu.edu/align/align.html) using default parameters (Max Match =11; Min Mismatch =-4; Gap-Open Penalty =10; Gap-Extension Penalty =2) can be used to align and determine percentage identity between individual pairs of sequences or sections thereof When so compared, the RhD1 and RhD2 light chain variable regions are 94% identical (104 matches, 6 mismatches, 0 gaps, similarity score of 540), CDR1 regions are 88% identical (8 matches, 1 mismatch, 0 gaps, similarity score of 43), CDR2 regions are 100% identical (3 matches, 0 mismatches, 0 gaps, similarity score of 16), and CDR3 regions are 90% identical (9 matches, 1 mismatch, 0 gaps, similarity score of 43). The RhD1 and RhD2 heavy chain variable regions are 94% identical (123 matches, 7 mismatches, 0 gaps, similarity score of 650), CDR1 regions are 87% identical (7 matches, 1 mismatch, 0 gaps, similarity score of 37), CDR2 regions are 100% identical (8 matches, 0 mismatches, 0 gaps, similarity score of41), and CDR3 regions are 95% identical (22 matches, 1 mismatch, 0 gaps, similarity score of 131).
Expression Vectors
Two plasmid expression vectors, designated pCB3 and pCB11, were constructed for expressing the antibody heavy and light chains in CHO dhfr-cells.
pCB3
This plasmid is illustrated in FIG. 3. The components of this plasmid are as listed in Table 2.







TABLE 2







Components of expression vector pCB3










Vector component
Short form
Function
Source





Human Elongation
EF1α Promoter
Promoter of
Human genomic DNA


Factor 1 α with first

expression
(Clontech)


intron


Ampicillin resistance
AMPr
Plasmid propagation
Commercial vector


gene (βlactamase)

in bacteria
(pBluescript; Stratagene)


Origin of replication
pUCori
Plasmid replication
Commercial vector




in bacteria
(pBluescript; Stratagene)


Simian virus
SV40E poly(A)
Transcription
Commercial vector


polyadenylate signal

termination
(pSV40; BRL/Invitrogen)


Simian virus 40E
SV40E Promoter
Promoter of
Commercial vector


promoter sequence

expression
(pSV40; BRL/Invitrogen)


Bovine growth hormone
BGH Poly(A)
Transcription
Commercial vector


polyadenylate signal

termination
(BRL/Invitrogen)


Dihydrofolate reductase
DHFR
DHFR selection
Murine cDNA (Sierra


gene

marker
Biosource, Inc.)









pCB11

This plasmid is illustrated in FIG. 4. The components of this plasmid are as listed in Table 3.







TABLE 3







Components of expression vector pCB11










Vector component
Short form
Function
Source





Human Elongation
EF1α
Promoter of expression
Human genomic DNA


Factor 1 α with first
Promoter

(Clontech)


intron


Ampicillin resistance
AMPr
Plasmid propagation in
Commercial vector


gene (βlactamase)

bacteria
(pBluescript;





Stratagene)


Origin of replication
pUCori
Plasmid replication in
Commercial vector




bacteria
(pBluescript;





Stratagene)


Simian virus
SV40E poly(A)
Transcription
Commercial vector


polyadenylate signal

termination
(pSV40;





BRL/Invitrogen)


Neomycin
neo Mutant
Antibiotic selection
Commercial vector


phosphotransferase

marker
(pSV-Neo;


(Mutant)


BRL/Invitrogen)





modified by Sierra





Biosource, Inc.


Simian virus 40E
SV40E
Promoter of expression
Commercial vector


promoter sequence
Promoter

(pSV40;





BRL/Invitrogen)


Bovine growth
BGH Poly(A)
Transcription
Commercial vector


hormone polyadenylate

termination
(BRL/Invitrogen)


signal









Insertion of Recombinant Immunoglobulin Genes into Expression Vectors

A second PCR was used to amplify the HCs and LCs with appropriate restriction sites added so that the fragments could be inserted into expression vectors. The design of the gene-specific forward primers was based on obtained sequences. The consensus Kozak motif (GCCACC), known to increase the efficiency of eukaryotic translation, was included in each forward primer (Table 5).
The primers (SEQ ID NOs: 20 to 27) for Insertion of RhD1-RhD3 HCs and LCs into expression vectors were as follows.







RhD1 HC:


Forward gene-specific primer (GSP):


5′-ATCGTCTAGAGCCACCATGGACTGGACCTGGAGGTTCC-3′


 


RhD2 HC:


Forward GSP:


5′-ATCGTCTAGAGCCACCATGGACTGGACCTGGAGGTTCC-3′


 


RhD3 HC:


Forward GSP:


5′-ATCGTCTAGAGCCACCATGGACACACTTTGCTACACACTCC-3′


 


The reverse primer used for all heavy chains:


5′-TGACGAATTCCACTCATTTACCCGGAGACAGG-3′


 


RhD1-RhD2 LCs:


Forward GSP:


5′-ATCGTCTAGAGCCACCATGGCCTGGGCTCTGCTATTC-3′


 


Reverse primer:


5′-ACTGGAATTCGAACCTATGAACATTCTGTAGGGG-3′


 


RhD3 LC:


Forward GSP:


5′-ATCGTCTAGAGCCACCATGGACATGAGGGTCCCCG-3′


 


Reverse primer:


5′-GACTGAATTCCTAACACTCTCCCCTGTTGAAGC-3′






The PCR cycle for insertion of RhD1-RhD3 HCs and LCs into expression vectors comprised the following steps:

























Construction of IgG3 Variant of RhD1 Antibody

An IgG3 variant of RhD1 was designed as a chimera between the variable region of RhD1 and the constant region of RhD3. The chimerization took advantage of the identical 5′ ends of the RhD1 (IgG1) and RhD3 (IgG3) constant regions. The reverse primer specific for variable domain of RhD1 was designed to overlap three codons of the constant region and to introduce silent mutations that created an NheI restriction site. Identical modification was introduced into the RhD3 constant region 5′ end by the forward primer. The NheI restriction site allowed for convenient in-frame cloning of amplified RhD1 variable domain in front of the RhD3 constant region. This was performed in two steps.
First, the constant region of IgG3 HC from RhD3 antibody was amplified, cut with XbaI and EcoRI enzymes, and ligated into XbaI/EcoRI-digested pCB3 vector. In the second step, this intermediary plasmid was re-cut with XbaI and NheI endonucleases, and the amplified variable region of RhD1, digested with the same enzymes, was inserted.
The primers (SEQ ID NO: 28-31) used for Construction of IgG3 variant of RhD were as follows.







Primers used for amplification of RhD3 constant


region:


Forward:


5′-ATCGTCTAGAGTCAGCTAGCACCAAGGGCCCATCGGTCTTCC-3′


 


Reverse:


5′-TGACGAATTCCACTCATTTACCCGGAGACAGG-3′


 


Primers used for amplification of RhD1 variable


domain:


Forward:


5′-ATCGTCTAGAGCCACCATGGACTGGACCTGGAGGTTCC-3′


 


Reverse:


5′-GATGCTAGCTGAGGAGACGGTGATCGTGG-3′






The PCR cycle for constructing the IgG3 variant of RhD1 comprised the following steps:

























PCR enzyme: PfuUltra High-Fidelity Thermostable DNA-Polymerase (Stratagene).

Expression Vectors Containing Cloned Antibody Genes

The RhD1 HC, RhD1 LC, RhD2 HC, RhD2 LC, RhD3 HC, RhD3 LC, RhD1V3C HC (chimera composed of the RhD1 heavy chain variable domain and RhD3 heavy chain constant region) coding sequences as inserted into the expression vectors, including also the added Kozak motifs and restriction sites, are given as SEQ ID NOs: 32, 33, 34, 35, 36, 37, and 38, respectively. FIG. 5 is a map of pCB3 illustrating the location of the inserted anti-RhD antibody heavy chain, and FIG. 6 is a map of pCB11 illustrating the location of the inserted anti-RhD antibody light chain (the location of insertion being the same, regardless of the specific RhD1, RhD, RhD3 or RhD1V3C heavy or light chain being expressed).
Gene Optimization
Coding sequences of RhD1 and RhD3 antibodies were optimized by GENEART AG using proprietary algorithms. The optimized coding sequences for RhD1 HC, RhD1 LC, RhD3 HC, and RhD3 LC are given as SEQ ID NOs: 39, 40, 41 and 42, respectively.
Cloning of Optimized RhD1 Genes into Expression Vectors
The optimized genes for RhD1 were subcloned into pCB expression vectors. To add the restriction sites necessary for cloning, the coding regions were amplified by PCR using the primers listed below. Each amplified fragment was inserted in the respective vector and verified by sequencing.
The primers (SEQ ID NOs: 43 to 46) that were used for appending the restriction sites compatible with the pCB expression vectors to the optimized RhD1 genes are as follows.
Optimsed RhD1 HC:







Forward: 5′-ATCGTCTAGAGCCACCATGGACTGGACCTG-3′


 


Reverse: 5′-ATCGGGATCCTCATCACTTGCCGGGGGAC-3′






Optimised RhD1 LC:








Forward: 5′-ATCGTCTAGAGCCACCATGGCCTGGGCCC-3′


 


Reverse: 5′-ATCGGGATCCTCATCAGCTGCACTCGGTGGGG-3′






The XbaI and BamHI sites in the primers are underlined.

The optimized RhD1 HC and RhD1 LC coding sequences as inserted into the expression vectors, including added Kozac motifs and restriction sites, are given as SEQ ID NOs: 47 and 48.
Cell Culture
Growth Media
MEMα growth medium was used at all stages of recombinant CHO cell line development work. The components, formulation, and material sources are shown in Table 4. After the addition of all components, the complete medium was filtered through a 0.22 μm filter (Stericup-GP 0.22 μm filter unit, Millipore or equivalent).







TABLE 4







Culture media















Final


Medium
Components
Vendors
Catalog #
concentration





CHO DXB11
MEMα
Gibco or
32561-037 or
1x


Host Cell
without
Cellgro
CV2561-049
1x


Growth
ribonucleosides and


Medium 1
deoxyribonucleosides



HT, 250x
Gibco
31985-070
1x



Gamma-irradiated
Hyclone
SH30079.33
7.5%



dialyzed fetal bovine



serum (dFBS)



GlutaMax, 100x
Gibco
35050-061
1x


CHO DXB11
MEMα
Gibco
32571-036
1x


Host Cell
with ribonucleosides


Growth
and


Medium 2
deoxyribonucleosides



Gamma-irradiated
Hyclone
SH30070.03
7.5%



fetal bovine serum



(FBS)



GlutaMax, 100x
Gibco
35050-061
1x


Transfectant
MEMα
Gibco or
32561-037 or
1x


Selection
without
Cellgro
CV2561-049
1x


Medium
ribonucleosides and



deoxyribonucleosides



Gamma-irradiated
Hyclone
SH30079.33
7.5%



dFBS



GlutaMax, 100x
Gibco
35050-061
1x



Geneticin (a G-418
Gibco
10131-027
0.5 mg/ml



formulation)









Freezing Media

The composition of the freezing media used for cryopreservation of cells is given in Table 5.







TABLE 5







Components of freezing media













Volume per 100


Components
Vendors
Catalog #
ml










Freezing medium 1:










Gamma-irradiated
HyClone
SH30079.33
95 mL


dFBS


dimethyl sulfoxide
Sigma
D2438
 5 mL


(DMSO)







Freezing medium 2:










Gamma-irradiated
HyClone
SH30070.03
90 mL


FBS


DMSO
Sigma
D2438
10 mL









Maintenance of Cells

Dihydrofolate reductase (DHFR)-deficient CHO DXB11 cells were grown in Host Cell Growth Medium 1 or 2 (Table 4) and were split every 3-4 days.
Cell Density and Viability Measurements
Viable cell density and cell viability was determined using the Trypan Blue exclusion method and a hemocytometer (Hausser Scientific).
Stable Transfection and Amplification in Methotrexate (MTX)
CHO DXB11 cells were co-transfected with equal amounts of plasmid DNA coding for the light and heavy chains of the human IgG (Table 6). Transfections were performed using Lipofectamine 2000 reagent (Invitrogen) following the manufacturer's recommendation. Stable transfectants were selected using Transfectant Selection Medium (Table 4).







TABLE 6







Conditions for a typical transfection of CHO DXB11 cells













Amount of



Amount of HC
Amount of LC
Lipofectamine


Vessel
DNA
DNA
2000





T75 flask or
15 μg
15 μg
30-75 μl


10 cm dish









Transfected cells were cultured for 2 days at 37° C. and 5% CO2 in Host Cell Growth Medium 1 or 2 prior to initiation of the selection process by replacing the Growth Medium with Transfectant Selection Medium (Table 4).
During the selection process, the spent medium was removed and replaced with fresh medium whenever necessary. After the selection process was completed and the transfected cells resumed growing, the cells were either

    
    
        transferred into the Transfectant Selection Medium (Table 4) containing various levels of MTX (Calbiochem) for amplification of antibody genes, or
        subcloned (see below). In this case, 12 best-producing clones were selected and pooled for further amplification in MTX.

Single Cell Cloning

    
    


In order to select single-cell clones, stably transfected cells were plated in an appropriate number of flat-bottom 96-well plates at 0.5-1 cell per well. During the process, the cell growth and health was monitored under the microscope. Cells were cultured for approximately two weeks prior to selection of the best producing clones by screening with ELISA.
Enzyme-Linked Immunosorbent Assay (ELISA)
The antibody titers during all stages of cell line development were evaluated with the Human IgG ELISA Quantitation Kit (Bethyl Laboratories) according to manufacturer's instructions. Shortly, the Nunc Maxisorp ELISA plates were coated with Fc-specific goat anti-human IgG polyclonal antibody in phosphate-buffered saline (PBS). Plates were incubated overnight at 4° C. Next day, the plates were washed three times and blocked for 1 hour with powdered non-fat milk dissolved in the wash buffer. After a washing step, samples and standards were pipetted onto the plates and incubated at room temperature for 1 hour, followed by three washes. Secondary antibody conjugated to horseradish peroxidase (HRP) was then added to each well and the plates were incubated again at room temperature for 1 hour. Plates were washed three times with wash buffer, rinsed once with distilled water, and tapped dry. Tetramethylbenzidine (TMB)-containing substrate was added to each well and color was allowed to develop for 15 minutes at room temperature. The reaction was stopped by sulfuric acid and the plates were read on a plate reader (Bio-Rad, Molecular Dynamics, or Dynex Technologies) at 450 nm. The data was analyzed with a software package supplied with the plate reader.
Expression of Recombinant Antibodies from Cell Pools Stably Transfected with Non-Optimized cDNAs
The scheme of transfections (performed according to Table 6) and designations of the transfected cells are provided in Table 7.







TABLE 7







Designated name for transfected pools.












Name of
Recombinant


HC DNA in pCB3
LC DNA in pCB11
Stable Pool
IgG Isotype





RhD1 gamma
RhD1 lambda
RhD1
IgG1


RhD1V3C gamma
RhD1 lambda
RhD4
IgG3


RhD2 gamma
RhD2 lambda
RhD2
IgG1


RhD3 gamma
RhD3 kappa
RhD3
IgG3









Generally, a better expression was reached when the transfected cells were subcloned after the selection process, the clones were ranked for antibody production by ELISA, and only the pools of 12 best-producing clones were amplified in MTX. Amplification of selected but non-subcloned transfectants yielded pools exhibiting lower productivity, albeit in shorter time. One typical scheme of MTX amplification is shown below:

    
    
        Selected cells (OnM MTX) were transferred in parallel to Transfectant Selection Medium containing 50 nM or 100 nM MTX (Step 1)
        Cells recovered from Step 1 were expanded and split into 200 nM and 500 nM MTX (Step 2)
        Cells that have survived Step 2 were expanded and subjected to amplification in 1000 nM MTX (Step 3)
    
    


At each step, the antibody productivity was assessed by ELISA (Table 8).







TABLE 8







Examples of productivity of unamplified


and amplified pools of 12 best clones









Pools of 12 best

Antibody expression levels


clones
MTX level (nM)
after 7 day culture (μg/ml)












RhD1
0
10.8


RhD1
50
5.66


RhD1
200
6.44


RhD1
500
9.12


RhD1
1000
27.8


RhD2
0
9.25


RhD2
50
12.25


RhD2
100
12.75


RhD2
200
18.4


RhD3
0
4.08


RhD3
200
3.14


RhD3
500
6.85


RhD4
0
1.2


RhD4
0
2









The pools yielding the best antibody titers were expanded in tissue-culture flasks in Transfectant Selection Medium (without MTX and Geneticin and containing low bovine IgG FBS instead of regular FBS). The supernatants from these cultures were collected and used for purification of the antibodies.
Expression of RhD1 and RhD3 Antibodies by Transfected and Amplified Clonal Cell Populations Adapted to Serum-Free Media
As the levels of antibody expression obtained from the cell pools (Table 8) were still not as high as desired, the transfection, selection and amplification process was carried out anew, this time employing a subcloning step (as described above) after each amplification step, in addition to after the initial selection step, so as to obtain clonal cell lines (single cell clones) expressing amplified levels of anti-RhD antibody.
More specifically, CHO DXB11 cells were transfected with plasmids encoding the heavy and light chains of either RhD1 or RhD3. Transfection and selection of stably transfected cells was carried out in essentially the same manner as described above. Transfected cells were then subcloned, and the resulting clones screened for antibody production. The most productive clonal cell lines were amplified. After amplification, the cells were again subcloned, and the most productive clones subjected to a further round of amplification and subcloning. The selection media, and the amplification media used for the first and second amplification steps, are listed in Table 9.
The final best producing clonal cell lines (obtained after both rounds of amplification) were adapted to suspension growth in commercial serum-free media (IS CHO_CD4TM, Irvine Scientific). This task was performed either in the shake flasks or in spinner bottles by seeding the cells in a 1:1 mixture of the final amplification media (Table 9) and a serum-free media containing the same level of MTX, and then gradually increasing the proportion of the serum-free media over a period of four to six weeks until the cells were fully capable of growing in 100% serum-free medium.
The maximum productivities of the best producing RhD1 and RhD3 clonal cells lines, before and after the adaptation to serum-free media, are listed in Table 9. The supernatants from these cultures were again collected and used for purification of the antibodies.







TABLE 9







Selection and amplification media for five selected RhD clones. Included are


productivity data before and after the adaptation to serum-free media.









Recombinant Clone:












RhD1
RhD1
RhD3
RhD3



Clone 1
Clone 6
Clone1
Clone 4















Gene Optimization:
Yes
Yes
No
No












Selection
Selection:
Transfectant
Transfectant
Transfectant
Transfectant


and

Selection
Selection
Selection
Selection


Amplification

Medium
Medium
Medium
Medium


Media.



20 nM MTX
20 nM MTX


The
Amplification
Transfectant
Transfectant
Transfectant
Transfectant


composition
Step 1:
Selection
Selection
Selection
Selection


of the

Medium
Medium
Medium
Medium


Transfectant

No G418
No G418
No G418
No G418


Selection

300 nM MTX
300 nM MTX
200 nM MTX
200 nM MTX


Medium is
Amplification
Transfectant
Transfectant
Transfectant
Transfectant


listed in Table
Step 2:
Selection
Selection
Selection
Selection


4.

Medium
Medium
Medium
Medium




No G418
No G418
No G418
No G418




2,400 nM
1,200 nM
800 nM MTX
800 nM MTX




MTX
MTX


Antibody
Before
 87 μg/ml
100 μg/ml
128 μg/ml
 87 μg/ml


Productivity
adaptation to



serum-free



media



After
419 μg/ml
431 μg/ml
320 μg/ml
326 μg/ml



adaptation to



serum-free



media









Antibody Purification

The pH of the culture supernatants was adjusted to pH 7.2 with 1N NaOH. Each supernatant was filtered through a 0.2μ filter and loaded on a protein A column pre-equilibrated in phosphate-buffered saline (PBS). The column was washed with PBS to remove all the unbound material from the culture supernatant. The antibody bound to the protein A column was eluted with 0.1M Glycine (pH 2.5). The eluate was neutralized with 2M Tris buffer adjusted to pH 8.0. The eluate containing monoclonal antibody was dialyzed against PBS. The anti-RhD antibody concentration was determined by agglutination assay using D positive erythrocytes. The antibody concentration was determined spectrophotometrically at 280 nm using an optical density value of 1.4 OD for a 1 mg/ml solution based on the molar extinction coefficient for human monoclonal antibody.
Anti-D Quantitation by Hemagglutination Assay
The anti-RhD antibody levels in the supernatants and purified antibody were quantified by measuring the agglutination of bromelain-treated RhD positive erythrocytes using the Technicon Autoanalyzer system as previously described by Gunson et. al (H. H. Gunson, P. K. Phillips, and F. Stratton J. clin. Path., 1972, 25, 198-205. Polyclonal Anti-RhD antibodies from NIBSC (2nd International standard 01/572) were used as a standard.
Briefly, bromelain-treated RhD positive red cells are incubated with various concentrations of anti-RhD antibodies. The cells are allowed to agglutinate over a period of time. The agglutinated cells are removed in the autoanalyzer and the rest of the erythrocytes are lysed using detergent. The optical density of the released hemoglobin is measured spectrophotometrically. The anti-D concentrations of the samples are calculated using a standard graph obtained from various concentrations of the Anti-D standard.
Flow Cytometry Assay
Each human anti-RhD monoclonal antibody was serially diluted 1 in 3 down from 0.5 mg/ml to prepare the total of 15 dilutions. Each dilution was added to 1-5×105 RhD positive or RhD negative human red blood cells (RBCs), with otherwise matching genotypes, pretreated with papain to make the antigenic components of RhD more accessible to the antibodies. An anti-human IgG antibody labelled with Fluorescein Isothiocyanate (FITC) was used as a secondary antibody to stain antibodies bound to the RBCs.
The samples were analyzed on the FACSort instrument (Becton-Dickinson). The RBC population was gated for based on the forward- and side scatter parameters. Fluorescence of RhD negative samples was considered a background, since these cells lack the RhD antigen that is targeted by anti-RhD antibodies. RhD negative cells incubated with a particular concentration of antibody therefore served as a negative control for RhD positive cells incubated with the same antibody dilution. The specific fluorescence and the percentage of RhD positive cells bound by anti-RhD antibody (and stained with FITC labelled anti-human IgG) was then determined, for each dilution of anti-RhD antibody, based on the difference between the level of fluorescence in the RhD positive and RhD negative samples. For each anti-RhD antibody, the percentage of positive cells bound by the antibody was plotted against the logarithm of the antibody concentration, and EC50 was estimated from this chart. This provided basic information about the binding affinity and specificity of the antibodies for the RhD antigen.
ADCC Assay
The effectiveness of the anti-RhD antibodies in eliminating RhD-positive red blood cells in vivo, and thus utility of the antibodies in preventing immunization of an RhD-negative individual exposed to RhD-positive blood, was gauged via an antibody-dependant cellular toxicity (ADCC) assay.
The ADCC assay was based on the method described by Miescher et. al. (British Journal of Haematology 2000 111:157-166). RhD positive erythrocytes were treated with papain and subsequently labeled with the fluorescent dye 5- (and 6) carboxyfluorescein diacetate succinimidyl ester. The labeled erythrocytes were preincubated with varying concentrations (0.1-50 ng/ml) of anti-RhD antibodies for 1 hr. Peripheral blood mononuclear cells (PBMCs) were added to the erythrocyte suspension and incubated for 18 hrs in a CO2 incubator at 37° C. The extent of the target cell lysis at the end of incubation was determined by measuring the release of the dye from lysed RBCs into supernatant with a fluorometer. The percentage of cytotoxicity was calculated according to the following formula:




  
    %
    ⁢
    
      
    
    ⁢
    specific
    ⁢
    
      
    
    ⁢
    lysis
  
  =
  
    
      
        
          Fc
          exp
        
        -
        
          Fc
          med
        
      
      
        
          Fc
          det
        
        -
        
          Fc
          med
        
      
    
    ×
    100
  




where

    Fcexp=fluorescence of samples
    Fcdet=maximum fluorescence control (obtained by lysing the RBCs with a detergent (1% Triton-X100))
    Fcmed=background fluorescence control (spontaneous release of the dye from RBCs in the absence of PBMCs and antibody)


The percentage of cytotoxicity was then plotted against the logarithm of antibody concentration at which the erythrocytes were preincubated, and this data used to calculating the EC50, i.e. the effective concentration of antibody causing 50% of the maximum specific lysis achievable by that antibody. By way of example, FIG. 7 is a plot of percentage cytotoxicity again antibody concentration generated from the results of an ADCC assay using an NIBSC standard (anti-RhD polyclonal antibodies). This dose-response dependence theoretically yields a sigmoid curve with a near-linear middle region. To perform a linear approximation in this region, a straight line can be fitted to the pertinent data points by linear regression using a suitable software package (such as, for example, Microsoft ExcelTM). FIG. 8, for example, is a linear regression performed on the relevant data points from FIG. 7. An equation representing this straight line can then be used to calculate the EC50. For example for the data in FIG. 7, where the maximum specific lysis caused by the NIBSC standard polyclonal antibody was approximately 88% compared to the detergent-induced lysis (100%), the EC50 was calculated for the value of specific lysis equaling 44%.
Hemagglutination and ADCC Assay Results
Results of hemagglutination and ADCC assays, carried out in accordance with the procedures described above, are shown below in Table 10. Agglutination titers are expressed as micrograms of active (RhD antigen binding) antibody per mg of protein. The EC50 values were determined from two independent experiments.







TABLE 9







Agglutination titers and EC50 values


for RhD1, RhD3, and RhD4 antibodies.










Agglutination




Titer (μg of
ADCC EC50 (ng of Active Ab/ml)












Active Ab per
Experi-
Experi-



Antibody
mg of Protein)
ment 1
ment 2
Average














Control anti-RhD
100.0
1.2
2.1
1.7


mAb Batch No. 1


Control anti-RhD
100.0
0.9
1.9
1.4


mAb Batch No. 2


NIBSC Standard
7.1
0.5
1.3
0.9


(anti-RhD


Polyclonal Ab)


RhD1
716.2
0.7
1.5
1.1


Clone 1


RhD1
378.1
0.4
0.9
0.7


Clone 6


RhD3
324.3
0.2
0.3
0.3


Clone 1


RhD3
275.3
0.1
0.2
0.2


Clone 4


RhD4
303.3
0.1
0.5
0.3





A control polyclonal antibody (NIBSC Standard) and two batches of a control monoclonal antibody are included for comparison.






Formulations

The purified monoclonal anti-RhD antibodies can be formulated for administration via any suitable route. Typically, the antibodies are administered via injection. In such circumstances, the antibody is typically formulated as a liquid suspension of the antibodies in a suitable buffer solution. Exemplary buffers include:
phosphate-buffered saline (20 mM phosphate buffer (pH 6.8) containing 150 mM NaCl); and
glycine saline buffer (0.3 M glycine containing 0.15 M NaCl adjusted to pH 6.5).
Preferred formulations comprise both monoclonal antibodies having an IgG 1 constant region and monoclonal antibodies having an IgG 3 constant region. Thus, formulations comprising RhD1 antibodies (which are of the IgG 1 isotype) in combination with RhD3 antibodies (which are of the IgG 3 isotype) and/or RhD4 antibodies (which consist of the RhD1V3C heavy chain and RhD1 light chain) are preferred.

## Claims

1. An isolated anti-RhD monoclonal antibody comprising:
a) a heavy chain variable region which is at least 80% identical to the variable region of SEQ ID NO: 2 and has first, second and third CDRs which are identical to the respective first, second, and third CDRs of SEQ ID NO: 2, and a light chain variable region which is at least 80% identical to the variable region of SEQ ID NO. 4 and has a first, second and third CDRs which are identical to the respective first, second, and third CDRs of SEQ ID NO: 4; or
b) a heavy chain variable region which is at least 80% identical to the variable region of SEQ ID NO: 6 and has first, second and third CDRs which are identical to the respective first, second, and third CDRs of SEQ ID NO: 6, and a light chain variable region which is at least 80% identical to the variable region of SEQ ID NO: 8 and has first, second and third CDRs which are identical to the respective first, second, and third CDRs of SEQ ID NO: 8; or
c) a heavy chain variable region which is at least 80% identical to the variable region of SEQ ID NO: 10 and has first, second and third CDRs which are to the respective first, second, and third CDRs of SEQ ID NO: 10, and a light chain variable region which is at least 80% identical to the variable region of SEQ ID NO: 12 and has first, second and third CDRs which are identical to the respective first, second, and third CDRs of SEQ ID NO: 12.

2. The antibody of claim 1, wherein the respective variable regions are at least 90% identical.

3. The antibody of claim 1, wherein the respective variable regions are at least 95% identical.

4. The antibody of claim 1, wherein the respective variable regions are identical.

5. The antibody of claim 1, wherein the antibody comprises a light chain constant domain and a heavy chain constant domain.

6. The antibody of claim 5, wherein the antibody comprises a heavy chain constant region.

7. The antibody of claim 6, wherein said heavy chain constant domain or region is an IgG constant domain or region.

8. The antibody or fragment of claim 7, wherein said IgG constant domain or region is an IgG 1 or IgG 3 constant domain or region.

9. The antibody of claim 5, wherein said heavy chain constant domain or region is an IgG constant domain or region.

10. The antibody or fragment of claim 9, wherein said IgG constant domain or region is an IgG 1 or IgG 3 constant domain or region.

11. A pharmaceutical composition comprising a monoclonal antibody according to claim 1.

12. The pharmaceutical composition of claim 11, further comprising a second monoclonal antibody according to claim 1, wherein the first and second monoclonal antibodies are distinct from one another.

13. The pharmaceutical composition of claim 12, wherein the first monoclonal antibody has a heavy chain comprising an IgG 1 constant domain or region, and the second monoclonal antibody has a heavy chain comprising an IgG 3 constant domain or region.

14. An isolated polynucleotide encoding the light and/or heavy chain of an antibody according to claim 1.

15. An expression vector including coding sequences encoding the light and heavy chains of an antibody according to claim 1.

16. A recombinant cell transformed with an expression vector according to claim 15.

17. The recombinant cell of claim 16, wherein the cell is a mammalian cell.

18. A method of manufacturing monoclonal antibodies, comprising cultivating recombinant cells according to claim 16, and recovering the monoclonal antibody from the culture medium.

19. An expression system including coding sequences encoding the light and heavy chains of an antibody according to claim 1, the expression system comprising: a first expression vector including the coding sequence encoding the light chain; and a second expression vector including the coding sequence encoding the heavy chain.

20. A recombinant cell transformed with an expression system according to claim 19.

21. The recombinant cell of claim 20, wherein the cell is a mammalian cell.

22. A method of manufacturing monoclonal antibodies, comprising cultivating recombinant cells according to claim 20, and recovering the monoclonal antibody from the culture medium.

23. A method of inhibiting immunization of a RhD-negative human patient against RhD-positive blood, comprising administering a prophylaxis effective amount of a monoclonal antibody according to claim 1.

24. A method of inhibiting immunization of a RhD-negative human patient against RhD-positive blood, comprising administering a prophylaxis effective amount of a pharmaceutical composition according to claims 11.

25. A method of inhibiting immunization of a RhD-negative human patient against RhD-positive blood, comprising administering a prophylaxis effective amount of a pharmaceutical composition according to claims 12.

26. A method of inhibiting immunization of a RhD-negative human patient against RhD-positive blood, comprising administering a prophylaxis effective amount of a pharmaceutical composition according to claims 13.