# Patent

## Title
Anti-SOD1 antibodies and uses thereof

## Abstract

The present invention features anti-SOD1 antibodies and methods of using the antibodies for the treatment of amyotrophic lateral sclerosis (ALS) or the amelioration of symptoms associated with ALS.

## Background
CROSS-REFERENCE TO RELATED APPLICATIONS
This application is the U.S. National Stage filing under 35 U.S.C. §371 of International Application No. PCT/US2011/057699, filed Oct. 25, 2011, which claims the benefit of the filing date of U.S. Patent Application No. 61/406,831, filed on Oct. 26, 2010.


BACKGROUND OF THE INVENTION
Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disorder causing muscle weakness, followed by loss of motor function, leading to death. ALS patients typically live just three to five years following the first manifestation of symptoms. In a clinical setting, ALS is distinguished from other motor neuron diseases on the basis of initial symptom presentation, but may in fact belong to a group of motor neuron diseases sharing some substantive aspects of their pathophysiology or even etiology.
The pathology of ALS is manifested by motor neuron degeneration and death. Cortical motor cells disappear leading to retrograde axonal loss and gliosis in the corticospinal tract with ultimate atrophy of the spinal cord. During disease progression the ventral roots thin, and there is a loss of large myelinated fibers in motor nerves. Findings sometimes include a loss of frontal or temporal cortical neurons, and this can manifest symptomatically as ALS with frontotemporal dementia (ALS-FTD) although the typical course of the disease leaves cognitive functions intact. Intracellular inclusions in degenerating neurons and glia are common pathological findings of ALS; these include microfilament inclusions in spinal motor neurons, which may be associated with immunoreactive SOD1 particularly, but not exclusively, in familial ALS (FALS).
In Europe and North America, the incidence of ALS is about 2 cases per year per 100,000, while prevalence is around 5 cases per 100,000 with approximately 7,000 cases diagnosed annually in the US. Incidence increases with age, especially after 40, to a peak in the mid 70's. While age is a principle risk factor, family history is also important, with about 1 in 10 cases of ALS being familial. A number of environmental and behavioral risk factors, including smoking, have been proposed but none substantiated. Genetic analyses of sporadic ALS cases (SALS) have demonstrated significant associations between SALS and a range of loci. Mutations in loci more typically associated with FALS (superoxide dismutase 1 and others) have also been detected in SALS cases.
The majority of FALS cases follow an autosomal dominant inheritance pattern. About 20% of FALS patients are classified as Type 1 FALS, where the neurodegenerative phenotype is associated with inherited mutations to the superoxide dismutase type 1 (SOD1) gene localized in chromosome 21q22. Over 140 mutations of the SOD1 gene have been reported, almost all associated with ALS, but with significant variation in penetrance, age of onset, as well as nature and progression of symptoms. Some inherited SOD1 mutants with particularly weak penetrance and presumably, de novo somatic SOD1 mutants, may present as idiopathic (sporadic) ALS. It is also possible that a range of other genetic, physiological or environmental factors, isolated or in combination, may deleteriously impact the production and assembly of normal SOD1 enzyme, even in a genotypic background of wild type SOD1, and that this may in turn be linked to at least some further cases of idiopathic ALS.
Though the etiology of ALS is unclear, numerous mechanisms have been proposed, including SOD1-mediated toxicity. SOD1 is a copper and zinc containing metalloenzyme serving to deactivate superoxide radicals. It is ubiquitously expressed and is one of the most common intracellular enzymes, suggesting the function of the enzyme is important to the mediation of oxidative damage to cells. However, the loss of SOD1 function is not sufficient to account for the narrow and specific pathogenesis of the disease and it is generally thought, consistent with the dominant inheritance pattern, that it is some positive property of the mutant SOD1 that is implicated rather than a lack of function in the mutants.
One of the proposed mechanisms of mutant SOD1 toxicity is misfolding of the protein. Most SOD1 mutants fail to stably incorporate one or more metal ions and consequently fail to assemble as wild-type SOD1. The misfolded protein typically exposes reactive residues that are internal to the enzyme in wild-type SOD1, and perhaps as a consequence, SOD1 appears to form aggregates in ALS. These aggregates could be toxic themselves, or a secondary effect of the misfolding that is not the primary toxic mechanism.
There is evidence that mutant SOD1 expression is related to disease progression. Mutant SOD1 expression in non-neuronal cells may also be involved in the pathogenesis of ALS, while other evidence indicates that some properties of spinal cord tissue predispose cells to a pathological pathway that might damage other tissues subsequently, were a patient to survive the neurodegenerative disease. However, it is not clear what serves to initiate disease, and most type 1 FALS patients carry and presumably express mutant SOD1 for decades prior to the onset of the symptoms.
Several mouse and rat models expressing mutant forms of SOD1 exist. The experimentally induced mutations G93A, G37R, and G85R in the transgenic mouse models have phenotypes similar to human ALS. While there are also naturally occurring mouse models, the transgenic SOD1 mouse is considered the most accurate representation of the disease process.
The treatment options for ALS are limited. Riluzole is the only drug to have any established impact on survival in ALS. Riluzole can slow ALS progression to a modest degree, but its precise mechanism of action in ALS is unclear and ultimately it offers neither a cure nor sustained remediation of the condition. Multiple drugs have been tested for effectiveness in treating ALS but all others have failed to show efficacy in human clinical trials.
There is a need for effective therapeutics to treat and ameliorate the symptoms of ALS and diagnostics to assist in the identification of patients suffering from ALS.
SUMMARY OF THE INVENTION
ALS is a form of motor neuron disease caused by the degeneration of motor neurons, ultimately leading to impairment of mobility, speech, and respiratory functions. We have discovered anti-SOD1 antibodies that bind to mutant or misfolded SOD1 protein. The anti-SOD1 antibodies may also bind to wild-type SOD1. We have further discovered that the anti-SOD1 antibodies of the invention provide protection in an in vivo animal model and are useful for the treatment of ALS or amelioration of symptoms associated with ALS. We have also discovered various epitopes (linear or conformational) in SOD1 that are recognized by the anti-SOD1 antibodies of the invention. We have also discovered that anti-SOD1 antibodies that bind to the epitopes described herein (e.g., antibodies that compete with the anti-SOD1 antibodies described herein for binding to SOD1) and bind with an affinity of less than 50 nM (e.g., 25 nM, 20 nM, 10 nM, 5 nM, 1 nM, 500 pM, 250 pM, 100 pM, 50 pM, 10 pM or lower) also provide protection in an in vivo animal model and are useful for the treatment of ALS or amelioration of symptoms associated with ALS.
Accordingly, in a first aspect, the invention features an isolated anti-SOD1 monoclonal antibody, or antigen binding fragment thereof, wherein the antibody binds to an epitope of SOD1 protein, wherein the epitope comprises one or more amino acid sequences selected from the group consisting of amino acids 40-47 (SEQ ID NO: 307), amino acids 42-49 (SEQ ID NO: 313), amino acids 63-71 (SEQ ID NO: 309), amino acids 80-88 (SEQ ID NO: 311), and amino acids 107-121 (SEQ ID NO: 315) of human SOD1. In one embodiment the monoclonal antibody binds to an epitope that consists of amino acids 40-47 (SEQ ID NO: 307), amino acids 42-49 (SEQ ID NO: 313), amino acids 63-71 (SEQ ID NO: 309), amino acids 80-88 (SEQ ID NO: 311), or amino acids 107-121 (SEQ ID NO: 315) of human SOD1. In another embodiment, the anti-SOD1 antibody binds to one, two, three, four, or all five of the above-listed epitopes.
In various embodiments, the anti-SOD1 antibody of the invention can bind to a misfolded SOD1 protein, a mutant SOD1 protein, or a wild-type SOD1 protein. Such binding abilities are not mutually exclusive and a single antibody may bind to one or more forms of SOD1. The anti-SOD1 antibody of the invention may bind specifically to human SOD1 or may bind to human or mouse SOD1.
In another aspect, the invention features an isolated anti-SOD1 antibody, or antigen binding fragment thereof, wherein the monoclonal antibody binds to an epitope of SOD1 protein and wherein the antibody includes a heavy chain variable domain, a light chain variable domain, or both. The heavy chain variable domain of the anti-SOD1 antibody can include a CDRH1, a CDRH2, or a CDRH3, or combinations thereof, selected from the sequences provided below.

    
    
        (a) CDRH1 can include an amino acid sequence selected from SEQ ID NOs: 3, 21, 39, 57, 75, 93, 115, 133, 151, 169, 185, 203, and 219;
        (b) CDRH2 can include an amino acid sequence selected from SEQ ID NOs: 5, 23, 41, 59, 77, 95, 117, 135, 153, 171, 187, 205, and 221; and
        (c) CDRH3 can include an amino acid sequence selected from SEQ ID NOs: 7, 25, 43, 61, 79, 97, 119, 137, 155, 173, 189, 207, and 223.

The anti-SOD1 antibody of the invention desirably includes a CDRH1, CDRH2, and a CDRH3 of any one of the antibodies provided in Table 1 or 2.

    
    


In various embodiments of the invention, the light chain variable domain includes a CDRL1, a CDRL2, or a CDRL3, or combinations thereof, selected from the sequences provided below.

    
    
        (a) CDRL1 can include an amino acid sequence selected from SEQ ID NOs: 11, 29, 47, 65, 83, 101, 123, 141, 159, 177, 193, 211, and 227
        (b) CDRL2 can include an amino acid sequence selected from SEQ ID NOs: 13, 31, 49, 67, 85, 103, 111, 125, 143, 161, 179, 195, 213, and 229; and
        (c) CDRL3 can include an amino acid sequence selected from SEQ ID NOs: 15, 33, 51, 69, 87, 105, 127, 145, 163, 181, 197, 215, and 231.
    
    


The anti-SOD1 antibody of the invention desirably includes a CDRL1, CDRL2, and a CDRL3 of any one of the antibodies provided in Table 1 or Table 2, below.
In one embodiment, the anti-SOD1 antibody of the invention includes a CDRH1, CDRH2, CDRH3, CDRL1, CDRL2, and CDRL3 of any one of the antibodies provided in Tables 1 and 2.
The anti-SOD1 antibody of the invention can include a heavy chain variable domain amino acid sequence selected from the amino acid sequence set forth in SEQ ID NOs: 1, 17, 19, 35, 37, 53, 55, 71, 73, 89, 91, 107, 113, 129, 131, 147, 149, 165, 167, 183, 201, and 217. The anti-SOD1 antibody of the invention can include a light chain variable domain amino acid sequence selected from the amino acid sequence set forth in SEQ ID NOs: 9, 27, 45, 63, 81, 99, 109, 121, 139, 157, 175, 191, 199, 209, and 225. Desirably, the anti-SOD1 antibody of the invention includes a heavy chain variable domain amino acid sequence and a light chain variable domain amino acid sequence selected from a single antibody provided in Tables 1 and 2.
Examples of anti-SOD1 antibodies of the invention include antibody 595-16, 595-16-M1, 591-37, 597-31-M1, 358-11, 358-11-M1, 358-22, 358-22-M1, 597-120, 597-120-M1, 311-3, 311-3-M1, 312-19, 312-19-M1, 591-33, 591-33-M1, 114-41, 114-41-M1, 306-155, 14-173, 14-173-M1, 303-8, and 312-56. Examples of heavy chain and light chain variable domain sequences of anti-SOD1 antibodies of the invention that include a leader sequence, also encompassed by the invention, are provided in SEQ ID NOs: 233-306.
In another aspect, the invention features an anti-SOD1 antibody that competes with the binding of antibody 595-16, 595-16-M1, 591-37, 597-31-M1, 358-11, 358-11-M1, 358-22, 358-22-M1, 597-120, 597-120-M1, 311-3, 311-3-M1, 312-19, 312-19-M1, 591-33, 591-33-M1, 114-41, 114-41-M1, 306-155, 14-173, 14-173-M1, 303-8, or 312-56 to the SOD1 protein. In one aspect the antibody competes with any of the above-referenced antibodies and binds to an epitope of SOD1 with an affinity of less than 50 nM (e.g., 25 nM, 20 nM, 10 nM, 5 nM, 1 nM, 500 pM, 250 pM, 100 pM, 50 pM, 10 pM or lower).
In various embodiments of the invention, the heavy and light chains of the anti-SOD1 antibody can be full-length (e.g., an antibody can include at least one, and preferably two, complete heavy chains, and at least one, and preferably two, complete light chains) or can include an antigen-binding fragment. In yet other embodiments, the anti-SOD1 antibody has a heavy chain constant region chosen from, e.g., the heavy chain constant regions of IgG1, IgG2, IgG3, IgG4, IgM, IgA1, IgA2, IgD, and IgE. Desirably, the heavy chain constant region is IgG (IgG1, IgG2, IgG3, or IgG4). In another embodiment, the antibody has a light chain constant region chosen from, e.g., the light chain constant regions of kappa or lambda, preferably kappa (e.g., human kappa). In one embodiment, the antibody constant region is altered, e.g., mutated, to modify the properties of the antibody (e.g., to increase or decrease one or more of: Fc receptor binding, antibody glycosylation, the number of cysteine residues, effector cell function, or complement function).
In various embodiments of the above aspects of the invention, the anti-SOD1 antibody can bind to a conformational or a linear epitope of mutant, misfolded, or wild-type SOD1 protein. Such binding abilities are not mutually exclusive and a single antibody may bind to one or more forms of SOD1. In additional embodiments, the anti-SOD1 antibody can bind specifically to human SOD1 or can bind to both human SOD1 and mouse SOD1.
In various embodiments of any of the above aspects of the invention, the anti-SOD1 antibody binds to SOD1 with a Kd value of 50 nM or lower (e.g., 25 nM, 20 nM, 10 nM, 5 nM, 1 nM, 500 pM, 250 pM, 100 pM, 50 pM, 10 pM or lower).
In various embodiments of any of the above aspects of the invention, the anti-SOD1 antibody, or antigen binding fragment thereof, is a monoclonal antibody. In additional embodiments, the monoclonal antibody is a chimeric, humanized, or fully human antibody, or fragment thereof. In additional aspects of the invention, the monoclonal antibody, or antigen binding fragment thereof, is a single chain antibody; a diabody; an Fab, Fab′, F(ab′)2, Fv, scFv, dsFv, or ds-scFv, fragment; an antibody dimer; a bispecific antibody; a minibody; or multimers thereof.
The anti-SOD1 antibody, or antigen binding fragment thereof, of the invention may optionally be conjugated to an exogenous molecule. Non-limiting examples of exogenous molecules are described herein and include cytotoxins, detectable labels, and inhibitory nucleic acid molecules. In one embodiment, any of the anti-SOD1 antibodies of the invention may be conjugated to an inhibitory RNA (e.g., siRNA) molecule.
The invention also features a composition that includes any one or more of the anti-SOD1 antibodies, or antigen binding fragments thereof, of the invention. Desirably the composition further includes a pharmaceutically acceptable carrier or excipient.
The invention further features a nucleic acid molecule that encodes any of the anti-SOD1 antibodies, or antigen binding fragments thereof, of the invention. Exemplary nucleic acid molecules that encode anti-SOD1 antibodies of the invention are provided in Tables 1 and 2 and are included in the scope of the invention. The invention also includes a vector that includes a nucleic acid molecule encoding an anti-SOD1 antibody of the invention. The invention also includes a host cell transformed with a vector of the invention.
In another aspect, the invention features a method of producing an anti-SOD1 antibody, where the method includes culturing a host cell that includes a nucleic acid encoding an anti-SOD1 antibody, or antigen binding fragment thereof, under conditions for expression of the nucleic acid molecule, and recovering the antibody from the host cell culture medium.
In yet another aspect, the invention features a hybridoma cell line that produces or expresses any of the anti-SOD1 antibodies, or antigen binding fragments thereof, of the invention.
In another aspect, the invention features a method of treating ALS (sporadic or familial) in a subject (e.g., mammalian subject such as a human or mouse) that includes administering to the subject an anti-SOD1 antibody, or antigen binding fragment thereof, of any of the aspects of the invention described herein. In one embodiment, the method includes administering antibody 595-16, 595-16-M1, 591-37, 597-31-M1, 358-11, 358-11-M1, 358-22, 358-22-M1, 597-120, 597-120-M1, 311-3, 311-3-M1, 312-19, 312-19-M1, 591-33, 591-33-M1, 114-41, 114-41-M1, 306-155, 14-173, 14-173-M1, 303-8, or 312-56. In another embodiment, the method includes administering an antibody that competes with antibody 595-16, 595-16-M1, 591-37, 597-31-M1, 358-11, 358-11-M1, 358-22, 358-22-M1, 597-120, 597-120-M1, 311-3, 311-3-M1, 312-19, 312-19-M1, 591-33, 591-33-M1, 114-41, 114-41-M1, 306-155, 14-173, 14-173-M1, 303-8, or 312-56 for binding to SOD1 and desirably binds to SOD1 with an affinity less than 50 nM (e.g., 25 nM, 20 nM, 10 nM, 5 nM, 1 nM, 500 pM, 250 pM, 100 pM, 50 pM, 10 pM or lower).
In various embodiments of the above aspect, the anti-SOD1 antibody, or antigen binding fragment thereof, is provided in an amount and for a time effective to reduce or ameliorate or minimize worsening of at least one symptom of ALS. Non-limiting examples of symptoms of ALS include muscle weakness, muscle atrophy, difficulty swallowing, muscle cramping or stiffness, weight loss, or slurred speech.
The therapeutic methods of the invention may include administering more than one (e.g., two, three, four, or more) anti-SOD1 antibody, or antigen-binding fragment thereof, of the invention. The therapeutic methods of the invention may also include administering an additional therapeutic agent. Non-limiting examples of additional therapeutic agents include riluzole, agents for the treatment of one or more symptoms of ALS, therapeutic antibodies, or a therapeutic antibody conjugated to an exogenous molecule.
The anti-SOD1 antibody may be in a pharmaceutical composition that further includes a pharmaceutically acceptable carrier or excipient. The anti-SOD1 antibody may be in a kit or a pharmaceutical pack and the kit or pharmaceutical pack may further include more than one (e.g., two, three, four, or more) anti-SOD1 antibodies, or antigen binding fragments thereof, of the invention or one or more additional therapeutic agents. Non-limiting examples of additional therapeutic agents include riluzole, agents for the treatment of one or more symptoms of ALS, therapeutic antibodies, or an antibody conjugated to an exogenous molecule.
The invention also includes the use of the anti-SOD1 antibodies of the invention in methods and kits for the diagnosis of ALS or an increased risk of developing ALS. For the diagnostic methods and compositions, the anti-SOD1 antibody of the invention will preferably detect mutant or misfolded SOD1 and will not detect wild-type, natively folded SOD1. The anti-SOD1 antibody will bind to mutant or misfolded forms of SOD1 in a sample from a subject where a mutant or misfolded form of SOD1 is present or suspected to be present. If mutant or misfolded SOD1 is detected using an antibody of the invention, the subject may be diagnosed with ALS or an increased risk of developing ALS. The diagnostic methods and compositions can be used as an initial screen, a single test, or in conjunction with additional clinical and neurological testing used by a clinician in the diagnosis of ALS.
Other features and advantages of the invention will be apparent from the following description of the preferred embodiments thereof, and from the claims.



BRIEF DESCRIPTION OF THE DRAWINGS
FIG. 1 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 595-16. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 2 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 595-16. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 3 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 595-16 that have been modified (595-16-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 4 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 591-37. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 5 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 591-37. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 6 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 591-37 that have been modified (591-37-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 7 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 358-11. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 8 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 358-11. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 9 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 358-11 that have been modified (358-11-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 10 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 358-22. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 11 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 358-22. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 12 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 358-22 that have been modified (358-22-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 13 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 597-120. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 14 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 597-120. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 15 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 597-120 that have been modified (597-120-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 16 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 311-3. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 17 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 311-3. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 18 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 311-3 that have been modified (311-3-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 19 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 311-3 that have been modified (311-3-M1). The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 20 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 312-19. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 21 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 312-19. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 22 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 312-19 that have been modified (312-19-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 23 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 591-33. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 24 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 591-33. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 25 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 591-33 that have been modified (591-33-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 26 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 114-41. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 27 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 114-41. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 28 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 114-41 that have been modified (114-41-M1). The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 29 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 306-155. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 30 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 306-155. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 31 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 14-173. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 32 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 14-173. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 33 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 14-173 that have been modified (14-173-M1). The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined. Amino acids and nucleotides that were modified are underlined.
FIG. 34 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 303-8. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 35 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 303-8. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 36 is a representation of the amino acid and nucleic acid sequences of the VH chain expressed by clone 312-56. The V-segment, D-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 37 is a representation of the amino acid and nucleic acid sequences of the VK chain expressed by clone 312-56. The V-segment and J-segment genes are listed above the amino acid and nucleic acid sequences. The CDRs identified by the Kabat method are overlined.
FIG. 38 is an alignment of the native nucleotide sequence of human SOD1 with the codon-optimized nucleotide sequence of human SOD1.
FIG. 39 is a schematic representation of the bacterially-expressed truncations of the human SOD1 protein Amino acid numbers are shown above the bars and fragment names represented as letters are shown within the bars.
FIG. 40 shows a schematic of the truncated human SOD1 proteins from FIG. 39 on the left-hand side. Antibodies tested in ELISA against the truncated proteins are shown in the upper right hand portion of the figure. Recognition of the truncated fragments in ELISA is shown as a + or a −.
FIG. 41 is a schematic representation of peptides representing amino acid sequences of the hSOD1 protein Amino acid numbers are located above the bars and the peptide name is listed within the bars.
FIG. 42 shows the schematic of the peptides encompassing amino acids 38-77 of hSOD1 protein from FIG. 41 on the left-hand side. Antibodies tested in ELISA against the peptides are shown in the upper right hand portion of the figure. Recognition of the peptides in ELISA is shown as a + or a −.
FIG. 43 shows the schematic of the peptides encompassing amino acids 77-116 of hSOD1 protein from FIG. 41 on the left-hand side. Antibodies tested in ELISA against the peptides are shown in the upper right hand portion of the figure. Recognition of the peptides in ELISA is shown as a + or a −.
FIG. 44 shows the schematic of the peptides encompassing amino acids 102-153 of hSOD1 protein from FIG. 41 on the left-hand side. Antibodies tested in ELISA against the peptides are shown in the upper right hand portion of the figure. Recognition of the peptides in ELISA is shown as a + or a −.
FIG. 45 shows the amino acid sequence of the hSOD1 protein (SEQ ID NO: 317). Epitopes recognized by antibodies 595-16, 311-3, 591-37, 358-11 and 591-33 are shown by a box with the appropriate antibody listed above the box.
FIGS. 46A-46B show the results from competition studies for antibody binding to b-hSOD1. A) Six selected antibodies with unique sequence are listed across the top of the chart and were tested for the capacity to bind to SOD1 after individually saturating the b-hSOD1 with various conformation-dependent antibodies specific for SOD1 that are listed along the left of the chart. If the antibody listed across the top of the chart was able to bind after b-hSOD1 was saturated with the antibody along the left side of the chart, the square is marked—both bind. If the second antibody was unable to bind, the square is marked—compete. Antibodies that demonstrated weak binding or low affinity for b-hSOD1 are indicated in the chart. B) The experiment was performed as in A, but the antibodies across the top of the chart were bound to saturation to b-hSOD1 followed by assessment of binding of the various antibodies along the left of the chart. Based on the pattern of competition, antibodies were grouped and labeled as having similar antigen binding regions and therefore epitope.
FIG. 47 is a graphical representation of the different SOD1 conformation-dependent epitopes of eight selected antibodies. Ovals that overlap represent antibodies that compete and are unable to bind b-hSOD1 simultaneously. Ovals that touch, but do not overlap, represent antibodies that compete when one of the antibodies is bound first, but do not compete for binding when the order of antibody binding is reversed. Ovals that do not overlap represent antibodies that can bind b-hSOD1 simultaneously and thus do not compete.
FIGS. 48A-M show graphs of results from SOD1-specific antibodies binding to various SOD1 proteins as determined by ELISA. hSOD1 purified from human erythrocytes (E-hSOD1) was modified with oxidation (E-hSOD1-OX) or reduction (E-hSOD1-red). hSOD1 purified from bacteria as a glutathione sulfotransferase fusion protein (b-hSOD1) was modified with oxidation (b-hSOD1-OX) or reduction (b-hSOD1-red). Point mutants were introduced into the gene expressing b-hSOD1 and individually expressed and purified—alanine at amino acid position 4 to a valine (A4V), glycine at amino acid position 93 to an alanine (G93A), and glycine at amino acid position 85 to an arginine (G85R). Thirteen SOD1 specific antibodies (A through M) were assayed for the capacity to bind the various SOD1 proteins. The antibody used in the ELISA is listed above the graph and the proteins tested in ELISA are listed in the legend to the right of the graph.
FIGS. 49A-P show immunoblots detecting the immunoprecipitation of various hSOD1 proteins expressed in human cells using thirteen antibodies specific for SOD1. The human-derived cell line, HEK-293T, was transiently transfected with constructs engineered to express hSOD1 with a myc epitope tag. Point mutants were introduced into the gene expressing hSOD1 with a myc tag and also expressed—alanine at amino acid position 4 to a valine (A4V), glycine at amino acid position 93 to an alanine (G93A), and glycine at amino acid position 85 to an arginine (G85R). The HEK-293T cell line also has endogenously expressed hSOD1 that lacks the myc tag. Cells were also transfected with negative control DNA that did not express SOD1-pcDNA. A) The expression of the SOD1 proteins was determined by lysing the cells and analyzing the lysates by SDS-PAGE and immunoblotting with antibody specific for the myc tag or polyclonal antibody specific for hSOD1. The position of migration of hSOD1-myc and hSOD1 are indicated to the right of the immunoblots. B) Lysates were used in immunoprecipitations with protein A sepharose beads alone (no Mab) and analyzed by SDS-PAGE and immunoblots with antibody specific for the myc tag or polyclonal antibody specific for hSOD1. The position of migration of a non-specific high molecular weight (HMW) band is indicated to the right of the immunoblots. C) Lysates were used in immunoprecipitations with protein A sepharose beads and an isotype matched negative control antibody (Neg cont Mab) and analyzed by SDS-PAGE and immunoblots. D-P) Lysates were used in immunoprecipitations with protein A sepharose beads and separately tested with thirteen antibodies specific for SOD1 and analyzed by SDS-PAGE and immunoblots. The precipitating antibody is listed to the left of the immunoblots and the protein found in the lysate is listed above the immunoblots.
FIG. 50 shows immunoblots detecting the immunoprecipitation of mouse SOD1 protein expressed in mouse cells using eleven antibodies specific for hSOD1. Expression of SOD1 in mouse neuroblastoma cells (MNA) was assessed by SDS-PAGE followed by immunoblot with rabbit anti-SOD1 (lysate). The position of migration of SOD1 as well as position of a non-specific high molecular weight (HMW) band is indicated to the right of the immunoblots. MNA lysates were precipitated with 11 human anti-hSOD1 antibodies as well as a control, isotype matched irrelevant antibody (Neg control) which are listed above the immunoblots.
FIG. 51 shows fluorescent images of human cells expressing various hSOD1 proteins and stained with eleven SOD1 specific antibodies. HEK-293T cells were transiently transfected with a construct to express hSOD1 with a myc tag and an engineered point mutant changing the glycine at amino acid position 93 to an alanine (G93A). The HEK-293T cell line also has endogenously expressed hSOD1 that would lack the myc tag. The antibody used for staining is listed in the lower left corner of each image.
FIG. 52 shows images of immunohistochemistry staining of spinal cord tissue from mice transgenic for various hSOD1 proteins with ten SOD1 specific antibodies. Tissue was analyzed from mice transgenic for hSOD1 (1) or transgenic for hSOD1 with a point mutation changing the glycine at amino acid position 93 to an alanine (G93A) prior to the onset of ALS symptoms at 90 days after birth (2 and 3) or at the end stage of the ALS disease at 139 days after birth (4 and 5). Tissue sections were separately incubated with eleven SOD1 specific antibodies and imaged with a fluorescent microscope. Images were collected with a 50 msec exposure time (1, 2 and 4) or a 150 msec exposure time (3 and 5). An isotype matched negative control antibody (Neg control mab) was also tested.
FIG. 53 shows the results from competition studies for binding b-hSOD1 for linear and conformation-dependent SOD1-specific antibodies. Thirteen antibodies were bound to saturation to b-hSOD1 and are listed along the left of the chart. The capacity of a second antibody listed along the top of the chart to bind to the saturated b-hSOD1 was assessed and the results for each pair of antibodies marked in the chart. If the second antibody listed across the top of the chart was able to bind after b-hSOD1 was saturated with the antibody along the left side of the chart, the square is marked—both bind. If the second antibody was unable to bind, the square is marked—compete.
FIGS. 54A-C are graphs showing the average weight change of B6SJL-Tg(SOD1G93A)1Gur/J mice treated with monoclonal antibodies of the present invention and a control antibody. All weights were normalized as a percentage of the mouse weight at the time treatment was initiated. The time at which antibody treatment was initiated and discontinued is shown in the graph. The irrelevant control antibody is replicated on each of the three graphs.



DETAILED DESCRIPTION OF THE INVENTION
ALS is a form of motor neuron disease caused by the degeneration of motor neurons, ultimately leading to impairment of mobility, speech, and respiratory functions.
Familial, or hereditary, ALS occurs in 5-10% of all ALS cases. The remaining cases are considered “sporadic” and the causes are as yet unknown. Evidence of a misfunctioning SOD1 protein has suggested a role for the protein in both familial ALS and sporadic ALS and mutations in the SOD1 protein have been found in up to 20% of familial ALS cases. One hypothesis is that aggregation of SOD1 protein, either by mutation, misfolding, protein aggregation, or otherwise, leads to a disruption of cellular function that ultimately causes ALS.
We have discovered anti-SOD1 antibodies that bind to mutant or misfolded SOD1 protein. The anti-SOD1 antibodies may also bind to wild type SOD1. We have further discovered that the anti-SOD1 antibodies of the invention provide protection in an in vivo animal model and are useful for the treatment of ALS or amelioration of symptoms associated with ALS. We have also discovered various epitopes (linear or conformational) in SOD1 that are recognized by the anti-SOD1 antibodies of the invention. We have also discovered that anti-SOD1 antibodies that bind to the epitopes described herein (e.g., antibodies that compete with the anti-SOD1 antibodies described herein for binding to SOD1) and bind with an affinity of less than 50 nM, (e.g., 25 nM, 20 nM, 10 nM, 5 nM, 1 nM, 500 pM, 250 pM, 100 pM, 50 pM, 10 pM or lower), also provide protection in an in vivo animal model and are useful for the treatment of ALS or amelioration of symptoms associated with ALS.
In order that the present invention may be more readily understood, certain terms are first defined. Additional definitions are set forth throughout the detailed description.
I. Definitions
“Amyotrophic lateral sclerosis” or “ALS” as used herein refers to a disease of the nerve cells in the brain and spinal cord that control voluntary muscle movement. ALS is also known as Lou Gehrig's disease. As used herein, ALS includes both familial and sporadic forms of ALS. Symptoms of ALS include, but are not limited to, difficulty breathing or swallowing; head drop due to weak spinal and neck muscles; muscle cramps; muscle weakness that worsens over time; muscle contractions; muscle spasms; paralysis; speech problems; voice changes; drooling; ankle, feet, and leg swelling; and weight loss. Diagnosis of ALS is complicated but generally involves a complete neurological exam and clinical testing.
The term “SOD,” “SOD-1,” or “SOD1” as used herein refers to superoxide dismutase-1 and includes all analog and mutant forms from all species, particularly human SOD1 (hSOD1). The amino acid sequence (SEQ ID NO: 317) and the nucleic acid sequence (SEQ ID NO: 318) of human SOD1 is provided in FIGS. 45 and 38, respectively. In humans, three forms of superoxide dismutase have been identified. SOD1 is located in the cytoplasm and is generally found as a dimer. SOD2 is found in the mitochondria and SOD3 is extracellular and both are generally found as tetramers. SOD1 and SOD3 contain copper and zinc, while SOD2 has manganese in its reactive centre.
“Wild-type SOD1” refers to a SOD1 protein having a native or naturally occurring amino acid sequence. The amino acid sequence of human SOD1 is provided in SEQ ID NO: 317 and the nucleic acid sequence is provided in SEQ ID NO: 318. “Wild-type” can also refer to the normal native structure of a specific protein (e.g. the atomic level coordinates of the crystal structure of native dimeric SOD1 protein is available in the Protein Data Bank under the reference 2C9V. Wild-type folded SOD1 is optionally referred to as “natively folded” SOD1, “normally folded” SOD1, or “properly folded” SOD1.
“Misfolded” as used herein refers to the secondary and tertiary structure of a protein, and indicates that the protein has adopted a conformation that is not normal for that protein in its properly functioning state. Although misfolding can be caused by mutations in a protein, such as amino acid deletion, substitution, or addition, wild-type sequence protein can also be misfolded in disease, and expose disease-specific epitopes for instance, as a result of microenvironmental conditions and/or amino acid modification such as nitration, oxidation, carbonylation or other modification. Misfolded SOD1 includes abnormally folded SOD1 conformations that may or may not be due to mutations in the SOD1 protein sequence.
“Mutant SOD1” refers to forms of SOD1, which may or may not be endogenous forms of SOD1, that occur as a result of genetic mutation, amino acid substitution, alteration, or deletion. Generally, mutant SOD1 includes any alteration in the amino acid sequence that has been shown to be associated with disease, including but not limited to familial or sporadic ALS. Non-limiting examples of mutations in SOD1 associated with ALS include A4V, H46R, G85R, and G93A.
The term “antibody” as used herein includes intact antibodies (monoclonal or polyclonal), fragments of antibodies, antibody dimers; bispecific antibodies; minibodies; single chain antibodies; single domain antibodies; and diabodies. Also included are intact antibodies and fragments that have been mutated or altered either in their constant and/or variable region (e.g., mutations to produce chimeric, partially humanized, or fully humanized antibodies, as well as to produce antibodies with a desired trait, e.g., enhanced SOD1 binding and/or reduced FcR binding). Generally, an “intact antibody” refers to a protein comprising at least two heavy (H) chains and two light (L) chains inter-connected by disulfide bonds, or an antigen binding portion thereof. Each heavy chain is comprised of a heavy chain variable region (abbreviated herein as VH) and a heavy chain constant region. The heavy chain constant region includes three domains, CH1, CH2 and CH3. Each light chain is comprised of a light chain variable region (abbreviated herein as VL) and a light chain constant region. The light chain constant region includes one domain, CL. The VH and VL regions can be further subdivided into regions of hypervariability, termed complementarity determining regions (CDR), interspersed with regions that are more conserved, termed framework regions (FR). Each VH and VL is composed of three CDRs and four FRs, arranged from amino-terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, and FR4. The variable regions of the heavy and light chains contain a binding domain that interacts with an antigen. The constant regions of the antibodies may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g., effector cells) and the first component (CIq) of the classical complement system. Fragments of antibodies, also included in the present invention, generally include an “antigen binding portion” of an antibody (e.g., an Fab, Fab′, F(ab′)2, Fd, Fv, scFv, dsFv, or ds-scFv). The term “antigen-binding portion” of an antibody (or simply “antibody portion”), as used herein, refers to one or more fragments of an antibody that retain the ability to specifically bind to an antigen (e.g., SOD1). Examples of binding fragments include but are not limited to (i) an Fab fragment, a monovalent fragment that includes one constant and one variable domain of the heavy and light chains (e.g., a VL, VH, CL and CH1 domains) and may be generated by enzymatic cleavage (e.g., papain cleavage) of an intact antibody; (ii) an Fab′ fragment, a monovalent fragment similar to the Fab fragment but that is generated by cleavage C-terminal to the first disulfide bridge (e.g., by pepsin cleavage followed by treatment with a mild reducing agent to release the disulfide bridge) and that has additional amino acids at the C-terminus as compared to the Fab fragment; (iii) an F(ab′)2 fragment, a bivalent fragment that includes two Fab fragments linked by a disulfide bridge at the hinge region; (iv) an Fd fragment consisting of the VH and CHI domains; (v) an Fv fragment which includes the VL and VH domains of a single arm of an antibody; (vi) a single-chain variable fragment (scFv), which is a fusion protein of the VL and VH domains connected by a short peptide linker (generally 10 to 24 amino acids) that is usually rich in glycine for flexibility, as well as serine or threonine for solubility, and can either connect the N-terminus of the VH with the C-terminus of the VL, or the N-terminus of the VL with the C-terminus of the VH; (vii) a disulfide-stabilized Fv fragment (dsFv) in which the VH-VL heterodimer is stabilized by an interchain disulfide bond engineered between structurally conserved framework positions distant from complementarity-determining regions; (viii) a ds-scFv, in which the scFv fragment is stabilized by an interchain disulfide bond; (ix) a single domain Ab, which includes the variable domain of either the heavy or the light chain (e.g., a VH domain); (x) an isolated complementarity determining region; and (xi) a combination of two or more (e.g., 2, 3, 4, 5, or 6) isolated CDRs which may optionally be joined by a synthetic linker. Antibodies and antibody fragments are obtained using conventional techniques known to those with skill in the art, and are screened for utility using assays known in the art and described herein. Antigen-binding portions can be produced by recombinant DNA techniques, or by enzymatic or chemical cleavage of intact immunoglobulins.
The term “monoclonal antibody” as used herein refers to an antibody obtained from a population of substantially homogeneous antibodies, i.e., the individual antibodies comprising the population are identical except for possible naturally occurring mutations that may be present in minor amounts. Monoclonal antibodies are highly specific, being directed against a single antigenic site. Furthermore, in contrast to polyclonal antibody preparations which typically include different antibodies directed against different determinants (epitopes), each monoclonal antibody is directed against a single determinant (epitope) on the antigen. The modifier “monoclonal” indicates the character of the antibody as being obtained from a substantially homogeneous population of antibodies, and is not to be construed as requiring production of the antibody by any particular method. For example, the monoclonal antibodies to be used in accordance with the present invention may be made by the hybridoma method first described by Kohler et al., Nature 256:495, 1975, or may be made by recombinant DNA methods (see, e.g., U.S. Pat. No. 4,816,567). The “monoclonal antibodies” may also be isolated from phage antibody libraries using the techniques known in the art (e.g., Clackson et al., Nature 352:624-628, 1991 and Marks et al., J. Mol. Biol. 222:581-597, 1991, for example).
The monoclonal antibodies herein specifically include “chimeric” antibodies (immunoglobulins) in which a portion of the heavy and/or light chain is identical with or homologous to corresponding sequences in antibodies derived from a particular species or belonging to a particular antibody class or subclass, while the remainder of the chain(s) is identical with or homologous to corresponding sequences in antibodies derived from another species or belonging to another antibody class or subclass, as well as fragments of such antibodies, so long as they exhibit the desired biological activity (U.S. Pat. No. 4,816,567; and Morrison et al., Proc. Natl. Acad. Sci. U.S.A. 81:6851-6855, 1984).
“Humanized” forms of non-human (e.g., murine) antibodies are chimeric antibodies which contain minimal sequence derived from non-human immunoglobulin. For the most part, humanized antibodies are human immunoglobulins (recipient antibody) in which residues from a hypervariable region of the recipient are replaced by residues from a hypervariable region of a non-human species (donor antibody) such as mouse, rat, rabbit or nonhuman primate having the desired specificity, affinity, and capacity. In some instances, Fv framework region (FR) residues of the human immunoglobulin are replaced by corresponding non-human residues. Furthermore, humanized antibodies may comprise residues which are not found in the recipient antibody or in the donor antibody. These modifications are made to further refine antibody performance. In general, the humanized antibody will comprise substantially all of at least one, and typically two, variable domains, in which all or substantially all of the hypervariable loops correspond to those of a non-human immunoglobulin and all or substantially all of the FR regions are those of a human immunoglobulin sequence. The humanized antibody optionally also will comprise at least a portion of an immunoglobulin constant region (Fc), typically that of a human immunoglobulin. For further details, see Jones et al., Nature 321:522-525, 1986; Riechmann et al., Nature 332:323-329, 1988; and Presta, Curr. Opin. Struct. Biol. 2:593-596, 1992.
The term “human antibody” or “fully human antibody” includes antibodies having variable and constant regions (if present) of human germline immunoglobulin sequences. Human antibodies of the invention can include amino acid residues not encoded by human germline immunoglobulin sequences (e.g., mutations introduced by random or site-specific mutagenesis in vitro or by somatic mutation in vivo) (see, Lonberg, N. et al. (1994) Nature 368(6474): 856-859); Lonberg, N. (1994) Handbook of Experimental Pharmacology 113:49-101; Lonberg, N. and Huszar, D. (1995) Intern. Rev. Immunol. Vol. 13: 65-93, and Harding, F. and Lonberg, N. (1995) Ann. N.Y. Acad. Sci 764:536-546). However, the term “human antibody” does not include antibodies in which CDR sequences derived from the germline of another mammalian species, such as a mouse, have been grafted onto human framework sequences (i.e., humanized antibodies).
The term “hypervariable region,” “HVR,” or “HV,” when used herein, refers to the regions of an antibody variable domain which are hypervariable in sequence and/or form structurally defined loops. Generally, antibodies comprise six hypervariable regions; three in the VH (H1, H2, H3), and three in the VL (L1, L2, L3). A number of hypervariable region delineations are in use and are encompassed herein including but not limited to the Kabat Complementarity Determining Regions (CDRs) (Kabat et al., Sequences of Proteins of Immunological Interest, 5th Ed. Public Health Service, National Institutes of Health, Bethesda, Md. (1991)) and Chothia's reference to the location of the structural loops (Chothia & Lesk J. Mol. Biol. 196:901-17 (1987)). The AbM hypervariable regions represent a compromise between the Kabat CDRs and Chothia structural loops, and are used by Oxford Molecular's AbM antibody modeling software. Hypervariable regions may also be identified using a combination of such methods, for example, one method for the identification of CDRH1 and CDRH2 and another method for the identification of CDRH3. Hypervariable regions or CDRs may include extended hypervariable regions as follows: 24-36 (L1), 46-56 (L2) and 89-97 (L3) in the VL and 26-35 (H1), 49-65 or 50 to 65 (H2) and 93-102 (H3) in the VH. The variable domain residues are numbered according to Kabat for each of these definitions. Computer generated programs based on the above methods, including but not limited to VBASE and IMGT can also be used to identify hypervariable regions.
As used herein, a “heterologous antibody” is defined in relation to the transgenic non-human organism producing such an antibody. This term refers to an antibody having an amino acid sequence or an encoding nucleic acid sequence corresponding to that found in an organism not consisting of the transgenic non-human animal, and generally from a species other than that of the transgenic non-human animal.
The term “recombinant human antibody” as used herein includes human antibodies that are prepared, expressed, created or isolated by recombinant means, such as (a) antibodies isolated from an animal (e.g., a mouse) that is transgenic for human immunoglobulin genes or a hybridoma prepared therefrom, (b) antibodies isolated from a host cell transformed to express the antibody, (c) antibodies isolated from a recombinant, combinatorial human antibody library, and (d) antibodies prepared, expressed, created or isolated by any other means that involve splicing of human immunoglobulin gene sequences to other DNA sequences. Such recombinant human antibodies have variable and constant regions derived from human germline immunoglobulin sequences. In certain embodiments, however, such recombinant human antibodies can be subjected to in vitro mutagenesis (or, when an animal transgenic for human Ig sequences is used, in vivo somatic mutagenesis) and thus the amino acid sequences of the VH and VL regions of the recombinant antibodies are sequences that, while derived from and related to human germline VH and VL sequences, may not naturally exist within the human antibody germline repertoire in vivo.
As used herein, “antibody mutant” or “antibody variant” refers to an amino acid sequence variant of a reference antibody (e.g., a species-dependent antibody) wherein one or more of the amino acid residues of the reference antibody have been modified. Such mutants necessarily have less than 100% sequence identity or similarity with the reference antibody. In a preferred embodiment, the antibody mutant will have an amino acid sequence having at least 75% amino acid sequence identity or similarity with the amino acid sequence of either the heavy or light chain variable domain of the reference antibody, more preferably at least 80%, more preferably at least 85%, more preferably at least 90%, and most preferably at least 95%. Identity or similarity with respect to this sequence is defined herein as the percentage of amino acid residues in the candidate sequence that are identical (i.e., same residue) or similar (i.e., amino acid residue from the same group based on common side-chain properties, see below) with the reference antibody residues, after aligning the sequences and introducing gaps, if necessary, to achieve the maximum percent sequence identity. None of N-terminal, C-terminal, or internal extensions, deletions, or insertions into the antibody sequence outside of the variable domain shall be construed as affecting sequence identity or similarity.
A “diabody” as used herein refers to an antibody that includes a VH domain connected to a VL domain on the same polypeptide chain (VH-VL) connected by a peptide linker that is too short to allow pairing between the two domains on the same chain. This forces pairing with the complementary domains of another chain and promotes the assembly of a dimeric molecule with two functional antigen binding sites. Diabodies can be monospecific, bispecific, or multispecific.
A “bispecific” or “bifunctional antibody” is a hybrid antibody having two different heavy/light chain pairs and two different binding sites. Bispecific antibodies can be produced by a variety of methods known in the art including fusion of hybridomas or linking of Fab fragments. See, e.g., Songsivilai & Lachmann, Clin. Exp. Immunol. 79:315-321 (1990); Kostelny et al, J. Immunol. 148, 1547-1553 (1992). As used herein, antibodies or antigen binding fragments thereof can be bispecific.
By “epitope” is meant a sequence of amino acids which, either as a result of linear structure or three dimensional conformation, forms the binding site for an antibody. Epitopes can be formed both from contiguous amino acids or noncontiguous amino acids juxtaposed by tertiary folding of a protein. Epitopes formed from contiguous amino acids are typically retained on exposure to denaturing solvents, whereas conformational epitopes formed by tertiary folding are typically lost on treatment with denaturing solvents. An epitope typically includes at least 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or 15 amino acids in a unique linear or spatial conformation. Methods of determining spatial conformation of epitopes include techniques in the art and those described herein, for example, x-ray crystallography and 2-dimensional nuclear magnetic resonance. See, e.g., Epitope Mapping Protocols in Methods in Molecular Biology, Vol. 66, G. E. Morris, Ed. (1996).
A “conformational epitope” refers to a sequence of discontinuous amino acid residues to form a three-dimensional structure in order for binding between the epitope and the antibody to occur.
A “non-conformational epitope” or “linear epitope” refers to a linear epitope which is typically comprised of a continuous amino acid sequence which is sufficient for binding with an antibody capable of binding to such an epitope. A linear epitope can be distinguished from a conformational epitope in that under denaturing conditions, (e.g., in an immunoblot assay as described herein), the epitope can still be bound by an antibody that recognizes such an epitope. Linear epitopes can be used for vaccine development, the raising of antibodies thereto, and/or for the use in active immunotherapy alone or in combination with passive immunotherapy. Conformational epitopes can also be used for such purposes but will generally be placed within the context of a protein scaffold so as to retain epitope conformation.
Epitopes that are “disease specific” in the context of the present specification, are epitopes that are presented or accessible selectively by one or more misfolded forms of SOD1 that are characteristic of a particular disease (e.g., ALS). A “disease specific” or “ALS specific” epitope refers to an epitope that is selectively presented or accessible on monomeric SOD1 or misfolded SOD1 in monomeric, dimeric or aggregated forms, but not on the molecular surface of the native, correctly folded, homodimeric form of SOD1. Non-limiting examples of epitopes of the invention include amino acids 40-47 (SEQ ID: 307), 42-49 (SEQ ID: 313), 63-71 (SEQ ID: 309), 80-88 (SEQ ID: 311), and 107-121 (SEQ ID NO:315) of hSOD1 (SEQ ID NO: 317). Such epitopes may be linear or conformational epitopes. These exemplary epitopes are provided in the amino acid sequence of hSOD1 provided in FIG. 45.
As used herein, the terms “specific binding,” “selective binding,” “selectively binds,” and “specifically binds,” refer to the ability of an antibody to bind to a SOD1 protein or nucleic acid of the invention, without substantially recognizing and binding other molecules present in a sample (e.g., a biological sample which includes a SOD1 polypeptide or nucleic acid of the invention). In one non-limiting example, an antibody that specifically binds a mutant or misfolded SOD1 polypeptide of the invention does not bind wild-type SOD1 protein. In another non-limiting example, an antibody that specifically binds SOD1 protein does not bind SOD2 or SOD3.
An antibody is said to “competitively inhibit” binding of a reference antibody to a given epitope if it preferentially binds to that epitope to the extent that it blocks, to some degree, binding of the reference antibody to the epitope. Competitive binding is determined in an assay in which the immunoglobulin under test inhibits specific binding of a reference antibody to a common antigen, such as SOD1. Numerous types of competitive binding assays are known, for example: solid phase direct or indirect radioimmunoassay (RIA), solid phase direct or indirect enzyme immunoassay (EIA), sandwich competition assay (see Stahli et al, Methods in Enzymology 9:242 (1983)); solid phase direct biotin-avidin EIA (see Kirkland et al, J. Immunol. 137:3614 (1986)); solid phase direct labeled assay, solid phase direct labeled sandwich assay (see Harlow and Lane, Antibodies: A Laboratory Manual, Cold Spring Harbor Press (1988)); solid phase direct label RIA using I125 label (see Morel et al, MoI. Immunol. 25(1):7 (1988)); solid phase direct biotin-avidin EIA (Cheung et al., Virology 176:546 (1990)); and direct labeled RIA. (Moldenhauer et al, Scand J. Immunol 32:77 (1990)). Typically, such an assay involves the use of purified antigen bound to a solid surface or cells bearing either of these, an unlabeled test immunoglobulin and a labeled reference immunoglobulin. Competitive inhibition is measured by determining the amount of label bound to the solid surface or cells in the presence of the test immunoglobulin. Usually the test immunoglobulin is present in excess. Usually, when a competing antibody is present in excess, it will inhibit specific binding of a reference antibody to a common antigen by at least 50-55%, 55-60%, 60-65%, 65-70%, 70-75%, or more.
As used herein, the term “affinity” refers to a measure of the strength of the binding of an individual epitope with the complementarity determining region of an immunoglobulin molecule. See, e.g., Harlow et al., Antibodies: A Laboratory Manual, (Cold Spring Harbor Laboratory Press, 2nd ed. 1988) at pages 27-28. The term “KD,” as used herein, is intended to refer to the dissociation equilibrium constant of a particular antibody-antigen interaction. Typically, the antibodies of the invention bind to SOD1 with a dissociation equilibrium constant (KD) of less than approximately 10−7M, such as less than approximately 10−8M, 10−9M or 10−10M or even lower when determined using standard methods known in the art. Affinity is measured using any art known methods or platforms such as the surface plasmon resonance (SPR) technology in a BIACORE instrument or an OCTET instrument.
As used herein, the term “avidity” refers to the overall stability of the complex between a population of immunoglobulins and an antigen, that is, the functional combining strength of an immunoglobulin mixture with the antigen. See, e.g., Harlow et al., supra, at pages 29-34. Avidity is related to both the affinity of individual immunoglobulin molecules in the population with specific epitopes, and also the valencies of the immunoglobulins and the antigen. For example, the interaction between a bivalent monoclonal antibody and an antigen with a highly repeating epitope structure, such as a polymer, would be one of high avidity. Antibodies can also be described or specified in terms of their cross-reactivity.
As used herein, the term “cross-reactivity” refers to the ability of an antibody, specific for one antigen, to react with a second antigen; a measure of relatedness between two different antigenic substances. Thus, an antibody is cross-reactive if it binds to an epitope other than the one that induced its formation. The cross-reactive epitope generally contains many of the same complementary structural features as the inducing epitope, and in some cases, may actually fit better than the original. For example, certain antibodies have some degree of cross-reactivity, in that they bind related, but non-identical epitopes, e.g., epitopes with at least 95%, at least 90%, at least 85%, at least 80%, at least 75%, at least 70%, at least 65%, at least 60%, at least 55%, and at least 50% identity (as calculated using methods known in the art and described herein) to a reference epitope. An antibody can be said to have little or no cross-reactivity if it does not bind epitopes with less than 95%, less than 90%, less than 85%, less than 80%, less than 75%, less than 70%, less than 65%, less than 60%, less than 55%, and less than 50% identity (as calculated using methods known in the art and described herein) to a reference epitope.
The term “Koff” as used herein, is intended to refer to the off-rate constant for the dissociation of an antibody from the antibody/antigen complex.
As used herein, “isotype” refers to the antibody class (e.g., IgG, IgM, IgA, IgD, or IgE) that is encoded by heavy chain constant region genes. In one embodiment, a human monoclonal antibody of the invention is of the IgG isotype. In another embodiment, a human monoclonal antibody of the invention is of the IgG1 or IgG2 isotype.
As used herein, “glycosylation pattern” is defined as the pattern of carbohydrate units that are covalently attached to a protein, more specifically to an immunoglobulin protein. A glycosylation pattern of a heterologous antibody can be characterized as being substantially similar to glycosylation patterns which occur naturally on antibodies produced by the species of the nonhuman transgenic animal, when one of ordinary skill in the art would recognize the glycosylation pattern of the heterologous antibody as being more similar to said pattern of glycosylation in the species of the nonhuman transgenic animal than to the species from which the CH genes of the transgene were derived. Antibody glycoslylation can occur in the variable region or the constant region and the glycosylation pattern can be altered to increase or decrease antibody function (e.g., ADCC activity) as desired.
By “substantially identical” is meant a nucleic acid or amino acid sequence that, when optimally aligned, for example using the methods described below, shares at least 70%, 71%, 72%, 73%, 74%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or even 100% sequence identity with a second nucleic acid or amino acid sequence, e.g., an anti-SOD1 antibody sequence disclosed herein. “Substantial identity” may be used to refer to various types and lengths of sequence, such as a full-length sequence, epitopes or immunogenic peptides, functional domains, coding and/or regulatory sequences, exons, introns, promoters, and genomic sequences. Percent identity between two polypeptides or nucleic acid sequences is determined in various ways that are within the skill in the art, for instance, using publicly available computer software such as Smith Waterman Alignment (Smith, T. F. and M. S. Waterman, J. Mol. Biol. 147:195-7, 1981); “BestFit” (Smith and Waterman, Advances in Applied Mathematics, 482-489, 1981) as incorporated into GeneMatcher PlusTM; BLAST program (Basic Local Alignment Search Tool), BLAST-2, BLAST-P, BLAST-N, BLAST-X, WU-BLAST-2, ALIGN, ALIGN-2, CLUSTAL, or Megalign (DNASTAR) software. In addition, those skilled in the art can determine appropriate parameters for measuring alignment, including any algorithms needed to achieve maximal alignment over the length of the sequences being compared. In general, for proteins, the length of comparison sequences will be at least 6 amino acids, preferably at least 7, 8, 9, 10, 20, 30, 40, 50, 60, 70, 80, 90, 100, 110, 120, 130, 140, 150, 160, 170, 180, 190, 200, 210, 220, 230, 240, or 250 amino acids or more. For nucleic acids, the length of comparison sequences will generally be at least 20, 25, 30, 50, 100, 125, 150, 200, 250, 300, 350, 400, 450, 500, 550, 600, 650, 700, 750 nucleotides or more. It is understood that for the purposes of determining sequence identity when comparing a DNA sequence to an RNA sequence, a thymine nucleotide is equivalent to a uracil nucleotide. Conservative substitutions typically include substitutions within the following groups: glycine, alanine; valine, isoleucine, leucine; aspartic acid, glutamic acid, asparagine, glutamine; serine, threonine; lysine, arginine; and phenylalanine, tyrosine.
A “consensus sequence” is a sequence formed from the most frequently occurring amino acids (or nucleotides) in a family of related sequences. In a family of proteins, each position in the consensus sequence is occupied by the amino acid occurring most frequently at that position in the family. If two amino acids occur equally frequently, either can be included in the consensus sequence. A “consensus framework” of an immunoglobulin refers to a framework region in the consensus immunoglobulin sequence.
The term “naturally-occurring” as used herein as applied to an object refers to the fact that an object can be found in nature. For example, a polypeptide or polynucleotide sequence that is present in an organism (including viruses) that can be isolated from a source in nature and which has not been intentionally modified by man in the laboratory is naturally-occurring.
By “purified” or “isolated” is meant separated from other components that naturally accompany it. Typically, a compound (e.g., antibody or antigen binding fragment thereof) is isolated when it is at least 50%, by weight, free from proteins, flanking nucleic acids, antibodies, and naturally-occurring organic molecules with which it is naturally associated. Preferably, the antibody, or antigen binding fragment thereof, is at least 75%, more preferably, at least 80%, 85%, or 90%, and most preferably, at least 95% or 99%, by weight, purified or isolated. The antibody, or antigen binding fragment thereof, is preferably at least 2, 3, 4, 5, or 10 times as pure or isolated as the starting material, as measured using polyacrylamide gel electrophoresis, column chromatography, optical density, HPLC analysis, or Western blot analysis (Ausubel et al., supra).
By “reduce or inhibit” is meant the ability to cause an overall decrease preferably of at least 5%, 6%, 7%, 8%, 9%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50% or more, and more preferably an overall decrease of at least 60%, 70%, 75%, 80%, 85%, 90%, 95% or more. For example, in some embodiments of the invention, reduce or inhibit can refer to the levels (polypeptide or mRNA levels) or a biological activity of a SOD1 protein or symptoms of the disorder (e.g., ALS) being treated.
By “subject” is meant a mammal, including, but not limited to, a human or non-human mammal, such as a cow, a horse, a sheep, a pig, a goat, a dog, or a cat.
By “pharmaceutically acceptable carrier” is meant a carrier that is physiologically acceptable to the treated mammal while retaining the therapeutic properties of the compound with which it is administered. One exemplary pharmaceutically acceptable carrier substance is physiological saline. Other physiologically acceptable carriers and their formulations are known to one skilled in the art and described, for example, in Remington's Pharmaceutical Sciences, (20th edition), ed. A. Gennaro, 2000, Lippincott, Williams & Wilkins, Philadelphia, Pa. One or more of the antibodies, or antigen binding fragments thereof, of the invention may be administered in a pharmaceutically acceptable carrier to a subject (e.g., a human).
A “pharmaceutically acceptable salt” refers to a salt that retains the desired biological activity of the parent compound and does not impart any undesired toxicological effects (see e.g., Berge, S. M., et al. (1977) J. Pharm. Sci. 66: 1-19). Examples of such salts include acid addition salts and base addition salts. Acid addition salts include those derived from nontoxic inorganic acids, such as hydrochloric, nitric, phosphoric, sulfuric, hydrobromic, hydroiodic, phosphorous and the like, as well as from nontoxic organic acids such as aliphatic mono- and dicarboxylic acids, phenyl-substituted alkanoic acids, hydroxy alkanoic acids, aromatic acids, aliphatic and aromatic sulfonic acids and the like. Base addition salts include those derived from alkaline earth metals, such as sodium, potassium, magnesium, calcium and the like, as well as from nontoxic organic amines, such as N,N′-dibenzylethylenediamine, N-methylglucamine, chloroprocaine, choline, diethanolamine, ethylenediamine, procaine, and the like.
By “therapeutic amount” is meant an amount that when administered, either by direct administration or by an ex vivo approach, to a patient suffering from a SOD1 mediated disorder (e.g., ALS) is sufficient to cause a qualitative or quantitative reduction (e.g., at least a 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 60%, 70%, 80%, 90%, or even 100% reduction) in one or more (e.g., 2, 3, 4, 5, or 6) of the symptoms of the disorder. A therapeutic amount in some embodiments includes a prophylactic amount which refers to an amount that, when administered, results in a decrease (e.g., at least a 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 60%, 70%, 80%, 90%, or even 100% reduction) in the likelihood of developing a SOD1 mediated disorder (e.g., ALS).
By “treating” or “ameliorating” is meant treating or ameliorating a condition or symptom(s) of the condition. To “treat disease” or use for “therapeutic treatment” refers to administering the treatment to a subject already suffering from a disease to improve the subject's condition. Preferably, the subject is diagnosed with or identified as having a predisposition for developing a SOD1 mediated disorder (e.g., ALS). As compared with an equivalent untreated control, such amelioration or degree of treatment is at least 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, or 100%, as measured by any standard technique. Symptoms of ALS that can be ameliorated or treated by the antibodies of the invention include but are not limited to difficulty breathing or swallowing; head drop due to weak spinal and neck muscles; muscle cramps; muscle weakness that worsens over time; muscle contractions; muscle spasms; paralysis; speech problems; voice changes; drooling; ankle, feet, and leg swelling; and weight loss. Improvements in symptoms of ALS can be measured using standard methods known in the art including neurological testing and clinical testing.
The term “nucleic acid molecule,” as used herein, is intended to include DNA molecules and RNA molecules. A nucleic acid molecule may be single-stranded or double-stranded, but preferably is double-stranded DNA.
The term “isolated nucleic acid molecule,” as used herein in reference to nucleic acids encoding antibodies or antibody portions (e.g., VH, VL, one or more CDRs) that bind to SOD1, is intended to refer to a nucleic acid molecule in which the nucleotide sequences encoding the antibody or antibody portion are free of other nucleotide sequences encoding antibodies that bind antigens other than SOD1, which other sequences may naturally flank the nucleic acid in human genomic DNA.
By “vector” is meant a DNA molecule, usually derived from a plasmid or bacteriophage, into which fragments of DNA may be inserted or cloned. A recombinant vector will contain one or more unique restriction sites, and may be capable of autonomous replication in a defined host or vehicle organism such that the cloned sequence is reproducible. A vector contains a promoter operably-linked to a gene or coding region such that, upon transfection into a recipient cell, an RNA or an encoded protein is expressed.
II. Anti-SOD1 Antibodies
The present invention encompasses purified monoclonal antibodies that bind to SOD1, including mutant, misfolded, or wild-type SOD1. The monoclonal antibodies of the invention may be mouse, chimeric, humanized, or fully human. The monoclonal antibodies of the invention include the anti-SOD1 antibodies described herein, as well as any antibody that binds to any of the epitopes described herein or competes with any of the antibodies described herein for binding to SOD1. A detailed description of the antibodies of the invention as well as methods for the production and identification of the antibodies of the invention are described in detail below.
Antibodies, also known as immunoglobulins, are typically tetrameric glycosylated proteins composed of two light (L) chains of approximately 25 kDa each and two heavy (H) chains of approximately 50 kDa each. Two types of light chain, termed lambda and kappa, may be found in antibodies. Depending on the amino acid sequence of the constant domain of heavy chains, immunoglobulins can be assigned to five major classes: A, D, E, G, and M, and several of these may be further divided into subclasses (isotypes), e.g., IgG1, IgG2, IgG3, IgG4, IgA1, and IgA2. Each light chain includes an N-terminal variable (V) domain (VL) and a constant (C) domain (CL). Each heavy chain includes an N-terminal V domain (VH), three or four C domains (CH1-3), and a hinge region. The CH domain most proximal to VH is designated as CH1. The VH and VL domains consist of four regions of relatively conserved sequences called framework regions (FR1, FR2, FR3, and FR4), which form a scaffold for three regions of hypervariable sequences (complementarity determining regions, CDRs). The CDRs contain most of the residues responsible for specific interactions of the antibody with the antigen. CDRs are referred to as CDR1, CDR2, and CDR3. Accordingly, CDR constituents on the heavy chain are referred to as CDRH1, CDRH2, and CDRH3, while CDR constituents on the light chain are referred to as CDRL1, CDRL2, and CDRL3. The CDRs typically refer to the Kabat CDRs, as described in Sequences of Proteins of Immunological Interest, US Department of Health and Human Services (1991), eds. Kabat et al. Another standard for characterizing the antigen binding site is to refer to the hypervariable loops as described by Chothia. See, e.g., Chothia, D. et al. (1992) J. Mol. Biol. 227:799-817; and Tomlinson et al. (1995) EMBO J. 14:4628-4638. Still another standard is the AbM definition used by Oxford Molecular's AbM antibody modeling software. See, generally, e.g., Protein Sequence and Structure Analysis of Antibody Variable Domains. In: Antibody Engineering Lab Manual (Ed.: Duebel, S, and Kontermann, R., Springer-Verlag, Heidelberg). Embodiments described with respect to Kabat CDRs can alternatively be implemented using similar described relationships with respect to Chothia hypervariable loops or to the AbM-defined loops, or combinations of any of these methods.
The anti-SOD1 antibodies of the present invention and the nucleic acid molecules of the present invention that encode the antibodies include the CDR amino acid and nucleic acid sequences shown in Table 1 below and in FIGS. 1-37.













TABLE 1





Antibody
CDRH1
CDRH2
CDRH3
CDRL1
CDRL2
CDRL3







595-16








Amino acid:
(SEQ ID NO: 3)
(SEQ ID NO: 5)
(SEQ ID NO: 7)
(SEQ ID NO: 11)
(SEQ ID NO: 13)
(SEQ ID NO: 15)


Nuc. Acid:
(SEQ ID NO: 4)
(SEQ ID NO: 6)
(SEQ ID NO: 8)
(SEQ ID NO: 12)
(SEQ ID NO: 14)
(SEQ ID NO: 16)


591-37


Amino acid:
(SEQ ID NO: 21)
(SEQ ID NO: 23)
(SEQ ID NO: 25)
(SEQ ID NO: 29)
(SEQ ID NO: 31)
(SEQ ID NO: 33)


Nuc. Acid:
(SEQ ID NO: 22)
(SEQ ID NO: 24)
(SEQ ID NO: 26)
(SEQ ID NO: 30)
(SEQ ID NO: 32)
(SEQ ID NO: 34)


358-11


Amino acid:
(SEQ ID NO: 39)
(SEQ ID NO: 41)
(SEQ ID NO: 43)
(SEQ ID NO: 47)
(SEQ ID NO: 49)
(SEQ ID NO: 51)


Nuc. Acid:
(SEQ ID NO: 40)
(SEQ ID NO: 42)
(SEQ ID NO: 44)
(SEQ ID NO: 48)
(SEQ ID NO: 50)
(SEQ ID NO: 52)


358-22


Amino acid:
(SEQ ID NO: 57)
(SEQ ID NO: 59)
(SEQ ID NO: 61)
(SEQ ID NO: 65)
(SEQ ID NO: 67)
(SEQ ID NO: 69)


Nuc. Acid:
(SEQ ID NO: 58)
(SEQ ID NO: 60)
(SEQ ID NO: 62)
(SEQ ID NO: 66)
(SEQ ID NO: 68)
(SEQ ID NO: 70)


597-120


Amino acid:
(SEQ ID NO: 75)
(SEQ ID NO: 77)
(SEQ ID NO: 79)
(SEQ ID NO: 83)
(SEQ ID NO: 85)
(SEQ ID NO: 87)


Nuc. Acid:
(SEQ ID NO: 76)
(SEQ ID NO: 78)
(SEQ ID NO: 80)
(SEQ ID NO: 84)
(SEQ ID NO: 86)
(SEQ ID NO: 88)


311-3


Amino acid:
(SEQ ID NO: 93)
(SEQ ID NO: 95)
(SEQ ID NO: 97)
(SEQ ID NO: 101)
(SEQ ID NO: 103)
(SEQ ID NO: 105)


Nuc. Acid:
(SEQ ID NO: 94)
(SEQ ID NO: 96)
(SEQ ID NO: 98)
(SEQ ID NO: 102)
(SEQ ID NO: 104)
(SEQ ID NO: 106)


311-3-M1


Amino acid:
(SEQ ID NO: 93)
(SEQ ID NO: 95)
(SEQ ID NO: 97)
(SEQ ID NO: 101)
(SEQ ID NO: 111)
(SEQ ID NO: 105)


Nuc. Acid:
(SEQ ID NO: 94)
(SEQ ID NO: 96)
(SEQ ID NO: 98)
(SEQ ID NO: 102)
(SEQ ID NO: 112)
(SEQ ID NO: 106)


312-19


Amino acid:
(SEQ ID NO: 115)
(SEQ ID NO: 117)
(SEQ ID NO: 119)
(SEQ ID NO: 123)
(SEQ ID NO: 125)
(SEQ ID NO: 127)


Nuc. Acid:
(SEQ ID NO: 116)
(SEQ ID NO: 118)
(SEQ ID NO: 120)
(SEQ ID NO: 124)
(SEQ ID NO: 126)
(SEQ ID NO: 128)


591-33


Amino acid:
(SEQ ID NO: 133)
(SEQ ID NO: 135)
(SEQ ID NO: 137)
(SEQ ID NO: 141)
(SEQ ID NO: 143)
(SEQ ID NO: 145)


Nuc. Acid:
(SEQ ID NO: 134)
(SEQ ID NO: 136)
(SEQ ID NO: 138)
(SEQ ID NO: 142)
(SEQ ID NO: 144)
(SEQ ID NO: 146)


114-41


Amino acid:
(SEQ ID NO: 151)
(SEQ ID NO: 153)
(SEQ ID NO: 155)
(SEQ ID NO: 159)
(SEQ ID NO: 161)
(SEQ ID NO: 163)


Nuc Acid:
(SEQ ID NO: 152)
(SEQ ID NO: 154)
(SEQ ID NO: 156)
(SEQ ID NO: 160)
(SEQ ID NO: 162)
(SEQ ID NO: 164)


306-155


Amino acid:
(SEQ ID NO: 169)
(SEQ ID NO: 171)
(SEQ ID NO: 173)
(SEQ ID NO: 177)
(SEQ ID NO: 179)
(SEQ ID NO: 181)


Nuc. Acid:
(SEQ ID NO: 170)
(SEQ ID NO: 172)
(SEQ ID NO: 174)
(SEQ ID NO: 178)
(SEQ ID NO: 180)
(SEQ ID NO: 182)


14-173


Amino acid:
(SEQ ID NO: 185)
(SEQ ID NO: 187)
(SEQ ID NO: 189)
(SEQ ID NO: 193)
(SEQ ID NO: 195)
(SEQ ID NO: 197)


Nuc. Acid:
(SEQ ID NO: 186)
(SEQ ID NO: 188)
(SEQ ID NO: 190)
(SEQ ID NO: 194)
(SEQ ID NO: 196)
(SEQ ID NO: 198)


303-8


Amino acid:
(SEQ ID NO: 203)
(SEQ ID NO: 205)
(SEQ ID NO: 207)
(SEQ ID NO: 211)
(SEQ ID NO: 213)
(SEQ ID NO: 215)


Nuc. Acid:
(SEQ ID NO: 204)
(SEQ ID NO: 206)
(SEQ ID NO: 208)
(SEQ ID NO: 212)
(SEQ ID NO: 214)
(SEQ ID NO: 216)


312-56


Amino acid:
(SEQ ID NO: 219)
(SEQ ID NO: 221)
(SEQ ID NO: 223)
(SEQ ID NO: 227)
(SEQ ID NO: 229)
(SEQ ID NO: 231)


Nuc. Acid:
(SEQ ID NO: 220)
(SEQ ID NO: 222)
(SEQ ID NO: 224)
(SEQ ID NO: 228)
(SEQ ID NO: 230)
(SEQ ID NO: 232)









The anti-SOD1 antibodies of the invention include any antibody that includes a CDRH1, CDRH2, CDRH3, CDRL1, CDRL2, or CDRL3, or combinations thereof, as provided for any one of the antibodies shown in Table 1 or FIGS. 1-37. Desirably, the anti-SOD1 antibodies include the CDRH1, CDRH2, CDRH3, CDRL1, CDRL2, and CDRL3 of any one of the antibodies shown in Table 1. The invention also includes any nucleic acid sequence that encodes a CDRH1, CDRH2, CDRH3, CDRL1, CDRL2, or CDRL3 as provided for any one of the antibodies shown in Table 1 or FIGS. 1-37. Desirably, the nucleic acids include the CDRH1, CDRH2, CDRH3, CDRL1, CDRL2, and CDRL3 nucleic acid sequences of any one of the antibodies shown in Table 1. It is known in the art that antibody heavy and light chain CDR3 domains play a particularly important role in the binding specificity/affinity of an antibody for an antigen. Accordingly, the anti-SOD antibodies of the invention, or the nucleic acid molecules thereof, desirably include at least the heavy and/or light chain CDR3s of antibodies as shown in Table 1 or FIGS. 1-37.
The complete amino acid and nucleic acid sequences for the heavy chain variable region and light chain variable region of the antibodies listed in Table 1 are provided in Table 2 and in FIGS. 1-37. Table 2 includes additional anti-SOD1 antibodies of the invention with modifications to the variable regions and these are referred to as “M1.” Modifications include mutations in the variable region sequences that modify immunogenicity, glycosylation, or susceptibility to alterations at that amino acid positions. Such targeted mutations are exemplary of possible mutations to the antibodies of the invention and should not be construed as limiting. Several of the “M1” antibodies are not listed in Table 1 because the alterations are in the framework regions and not the CDRs.









TABLE 2





Antibody
Heavy Chain Variable Region
Light Chain Variable Region







595-16




Amino acid:
SEQ ID NO: 1 
SEQ ID NO: 9 


Nucleic Acid:
SEQ ID NO: 2 
SEQ ID NO: 10 


595-16- M1




Amino acid:
SEQ ID NO: 17 
SEQ ID NO: 9 


Nucleic Acid:
SEQ ID NO: 18 
SEQ ID NO: 10 


591-37




Amino acid:
SEQ ID NO: 19 
SEQ ID NO: 27 


Nucleic Acid:
SEQ ID NO: 20 
SEQ ID NO: 28 


591-37-M1




Amino acid:
SEQ ID NO: 35 
SEQ ID NO: 27 


Nucleic Acid:
SEQ ID NO: 36 
SEQ ID NO: 28 


358-11




Amino acid:
SEQ ID NO: 37 
SEQ ID NO: 45 


Nucleic Acid:
SEQ ID NO: 38 
SEQ ID NO: 46 


358-11-M1




Amino acid:
SEQ ID NO: 53 
SEQ ID NO: 45 


Nucleic Acid:
SEQ ID NO: 54 
SEQ ID NO: 46 


358-22




Amino acid:
SEQ ID NO: 55 
SEQ ID NO: 63 


Nucleic Acid:
SEQ ID NO: 56 
SEQ ID NO: 64 


358-22-M1




Amino acid:
SEQ ID NO: 71 
SEQ ID NO: 63 


Nucleic Acid:
SEQ ID NO: 72 
SEQ ID NO: 64 


597-120




Amino acid:
SEQ ID NO: 73 
SEQ ID NO: 81 


Nucleic Acid:
SEQ ID NO: 74 
SEQ ID NO: 82 


597-120-M1




Amino acid:
SEQ ID NO: 89 
SEQ ID NO: 81 


Nucleic Acid:
SEQ ID NO: 90 
SEQ ID NO: 82 


311-3




Amino acid:
SEQ ID NO: 91 
SEQ ID NO: 99 


Nucleic Acid:
SEQ ID NO: 92 
SEQ ID NO: 100


311-3-M1




Amino acid:
SEQ ID NO: 107
SEQ ID NO: 109


Nucleic Acid:
SEQ ID NO: 108
SEQ ID NO: 110


312-19




Amino acid:
SEQ ID NO: 113
SEQ ID NO: 121


Nucleic Acid:
SEQ ID NO: 114
SEQ ID NO: 122


312-19-M1




Amino acid:
SEQ ID NO: 129
SEQ ID NO: 121


Nucleic Acid:
SEQ ID NO: 130
SEQ ID NO: 122


591-33




Amino acid:
SEQ ID NO: 131
SEQ ID NO: 139


Nucleic Acid:
SEQ ID NO: 132
SEQ ID NO: 140


591-33-M1




Amino acid:
SEQ ID NO: 147
SEQ ID NO: 139


Nucleic Acid:
SEQ ID NO: 148
SEQ ID NO: 140


114-41




Amino acid:
SEQ ID NO: 149
SEQ ID NO: 157


Nucleic Acid:
SEQ ID NO: 150
SEQ ID NO: 158


114-41-M1




Amino acid:
SEQ ID NO: 165
SEQ ID NO: 157


Nucleic Acid:
SEQ ID NO: 166
SEQ ID NO: 158


306-155




Amino acid:
SEQ ID NO: 167
SEQ ID NO: 175


Nucleic Acid:
SEQ ID NO: 168
SEQ ID NO: 176


 14-173




Amino acid:
SEQ ID NO: 183
SEQ ID NO: 191


Nucleic Acid:
SEQ ID NO: 184
SEQ ID NO: 192


 14-173-M1




Amino acid:
SEQ ID NO: 183
SEQ ID NO: 199


Nucleic Acid:
SEQ ID NO: 184
SEQ ID NO: 200


303-8




Amino acid:
SEQ ID NO: 201
SEQ ID NO: 209


Nucleic Acid:
SEQ ID NO: 202
SEQ ID NO: 210


312-56




Amino acid:
SEQ ID NO: 217
SEQ ID NO: 225


Nucleic Acid:
SEQ ID NO: 218
SEQ ID NO: 226









The anti-SOD1 antibodies of the invention include any antibody that includes a heavy chain variable domain or a light chain variable domain or both as shown in Table 2 or FIGS. 1-37. The invention also includes any nucleic acid molecule encoding an antibody that includes a heavy chain variable domain or a light chain variable domain nucleic acid sequence, or both, as shown in Table 2 or FIGS. 1-37.
Anti-SOD1 antibodies of this invention may optionally comprise antibody constant regions or parts thereof. For example, a VL domain may be attached at its C-terminal end to a light chain constant domain like Cκ or Cλ. Similarly, a VH domain or portion thereof may be attached to all or part of a heavy chain like IgA, IgD, IgE, IgG, and IgM, and any isotype subclass. Constant regions are known in the art (see, for example, Kabat et al., Sequences of Proteins of Immunological Interest, No. 91-3242, National Institutes of Health Publications, Bethesda, Md. (1991)). Therefore, antibodies within the scope of this invention may include VH and VL domains, or an antigen-binding portion thereof, combined with constant regions known in the art.
In certain embodiments, the VH and/or VL domains may be reverted to germline sequence, i.e., the FR of these domains are mutated using conventional molecular biology techniques to match those produced by the germline cells. In other embodiments, the FR sequences remain diverged from the consensus germline sequences. Non-limiting examples of such mutations to the antibodies of the invention include 59546-M1 (VH), 358-11-M1 (VH), 358-22-M1 (VH), 597-120-M1 (VH), 311-3-M1 (VH+VL), 312-19-M1 (VH), 591-33-M1 (VH), 114-41-M1 (VH), and 14-173-M1 (VL).
Additional examples of mutations described herein include mutation of the VH gene DP44, which contains the unnatural amino acids L13 and M260, and can be mutated to the natural amino acids K13 and T87 (595-16-M1 and 591-37-M1). Undesirable amino acids such as those that are glycosylated can also be mutated to amino acids that lack glycosylation such as the N56 converted to D56 in 311-3-M1 VL. In addition, an unpaired cysteine can be mutated to serine such as C77 to S77 in 14-173-M1 VL.
The anti-SOD1 antibodies may or may not include the framework region of the antibodies shown in FIGS. 1-37. Desirably, the anti-SOD1 antibodies are fully human antibodies and include the variable region sequences shown in FIGS. 1-37.
In another embodiment, the invention provides a fully human anti-SOD1 antibody including: (1) human heavy chain framework regions and human heavy chain CDRs, where at least one of the human heavy chain CDRs includes an amino acid sequence selected from the human heavy chain CDR amino acid sequences described herein; and (2) human light chain framework regions and human light chain CDRs, where at least one of the human heavy chain CDRs includes an amino acid sequence selected from the human light chain CDR amino acid sequences described herein, where the antibody retains the ability to bind to SOD1. The ability of the antibody to bind SOD1 can be determined using standard binding assays, such as those sets described herein.
Also included within the anti-SOD1 antibodies of the invention are the anti-SOD1 antibodies having a leader sequence included for secretion of the antibody protein, and nucleic acid molecules encoding the same. The amino acid and nucleic acid sequences for the antibodies with the leader sequences are provided in SEQ ID NOs: 233-306. In addition, the native leader associated with the antibody can be substituted with heterologous leaders that enhance antibody expression such as the osteonectin leader (SEQ ID NOs: 350-351).
The anti-SOD1 antibodies of the invention bind to SOD1, including wild type, mutant, misfolded, or aggregated SOD1. Desirably, the antibody binds to mutant or misfolded SOD1 and may optionally also bind to wild-type SOD1. The misfolded SOD1 bound by the antibody may include wild type or mutant sequence. Epitopes in the SOD1 protein that are recognized by the antibodies of the invention include but are not limited to amino acids include amino acids 40-47 (amino acids EGLHGFFHV; SEQ ID NO: 307), 42-49 (amino acids LHGFHVHE; SEQ ID NO: 313), 63-71 (amino acids HFNPLSRKH; SEQ ID NO: 309), 80-88 (amino acids HVGDLGNVT; SEQ ID NO: 311), and 107-121 (amino acids SGDHCIIGRTLVVHE; SEQ ID NO: 315) of human SOD1. Such epitopes may be linear or conformational epitopes. Also included in the invention are anti-SOD1 antibodies that bind to any of the epitopes described herein or that compete with any of the antibodies described herein for binding to the SOD1 protein. In one embodiment, an antibody or antibody-binding fragment thereof, specifically binds an epitope containing a sequence that is at least 70% identical (e.g., at least 71%, 72%, 73%, 74%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 90%, 95%, 96%, 97%, 98%, 99%, or 100% identical) to amino acids 40-47, 42-49, 63-71, 80-88, or 107-121, or combinations thereof, of the sequence of SEQ ID NO: 317. Antibodies that recognize the same epitope can be identified using routine techniques such as an immunoassay, for example, by showing the ability of one antibody to block the binding of another antibody to a target antigen, i.e., a competitive binding assay. Specifically excluded from the antibodies of the invention are the antibodies described in U.S. Patent Publication Nos. 20070292410 or 20090068194 (e.g., the monoclonal antibodies produced by hybridoma cell lines deposited with the International Depositary Authority of Canada under accession numbers ADI-290806-01, ADI-290806-02 and ADI-290806-03).
Anti-SOD1 antibodies of the invention can bind to SOD1 with high affinity, e.g., with a Kd less than 10−7 M, 10−8M, 10−9M, 10−10M, 10−11 M or lower. For example, the anti-SOD1 antibodies or fragments thereof can bind to SOD1 with an affinity between 5 pM and 500 nM, e.g., between 50 pM and 100 nM, e.g., between 500 pM and 50 nM. The invention also includes antibodies that compete with any of the antibodies described herein for binding to SOD1 and that have an affinity of 50 nM or lower (e.g., 20 nM or lower, 10 nM or lower, 500 pM or lower, 50 pM or lower, or 5 pM or lower). In yet another embodiment, the anti-SOD1 antibodies have dissociation kinetics in the range of 0.5-20 nM. The affinity and binding kinetics of the anti-SOD1 antibody can be tested using any method known in the art including but not limited to biosensor technology (e.g., OCTET or BIACORE).
The anti-SOD1 antibodies of the invention can be selected not only for binding to SOD1 but also for the ability to reduce or inhibit one or more SOD1-associated activities. Non-limiting examples of anti-SOD1 antibody activity include: a reduction (e.g., by at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more) in SOD1 activity or protein levels, clearance of SOD1 proteins including, but not limited to, mutated or misfolded SOD1, increased (e.g., by at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more) survival of neurons, increased (e.g., by at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more) number of neurons present in a subject or an animal model, increased (e.g., by at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more) preservation of intact neurons, and increased (e.g., by at least 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more) survival or time to onset of disease in a subject or an animal model (e.g., G93A mutant mouse model or G85R mutant mouse model).
III. Production of Anti-SOD-1 Antibodies
Numerous methods known to those skilled in the art are available for obtaining antibodies, or antigen-binding fragments thereof, of the invention. For example, antibodies can be produced using recombinant DNA methods. Monoclonal antibodies may also be produced by generation of hybridomas (see e.g., Kohler and Milstein (1975) Nature, 256: 495-499) in accordance with known methods. Hybridomas formed in this manner are then screened using standard methods, such as enzyme-linked immunosorbent assay (ELISA) and surface plasmon resonance (e.g., OCTET or BIACORE) analysis, to identify one or more hybridomas that produce an antibody that specifically binds with a specified antigen. Any form of the specified antigen may be used as the immunogen, e.g., recombinant antigen, naturally occurring forms, any variants or fragments thereof, as well as antigenic peptides thereof (e.g., any of the epitopes described herein as a linear epitope or within a scaffold as a conformational epitope).
One exemplary method of making antibodies includes screening protein expression libraries that express antibodies or fragments thereof (e.g., scFv), e.g., phage or ribosome display libraries. Phage display is described, for example, in Ladner et al., U.S. Pat. No. 5,223,409; Smith (1985) Science 228:1315-1317; Clackson et al. (1991) Nature, 352: 624-628; Marks et al. (1991) J. Mol. Biol., 222: 581-597WO92/18619; WO 91/17271; WO 92/20791; WO 92/15679; WO 93/01288; WO 92/01047; WO 92/09690; and WO 90/02809.
In addition to the use of display libraries, the specified antigen (e.g., any of the linear or conformation epitopes described herein) can be used to immunize a non-human animal, e.g., a rodent, e.g., a mouse, hamster, or rat. In one embodiment, the non-human animal includes at least a part of a human immunoglobulin gene. For example, it is possible to engineer mouse strains deficient in mouse antibody production with large fragments of the human Ig loci. Using the hybridoma technology, antigen-specific monoclonal antibodies derived from the genes with the desired specificity may be produced and selected. See, e.g., XENOMOUSETM, Green et al. (1994) Nature Genetics 7:13-21, US 2003-0070185, WO 96/34096, published Oct. 31, 1996, and PCT Application No. PCT/US96/05928, filed Apr. 29, 1996.
In another embodiment, a monoclonal antibody is obtained from the non-human animal, and then modified, e.g., humanized, deimmunized, chimeric, using recombinant DNA techniques known in the art. A variety of approaches for making chimeric antibodies have been described. See e.g., Morrison et al., Proc. Natl. Acad. Sci. U.S.A. 81:6851, 1985; Takeda et al., Nature 314:452, 1985, Cabilly et al., U.S. Pat. No. 4,816,567; Boss et al., U.S. Pat. No. 4,816,397; Tanaguchi et al., European Patent Publication EP171496; European Patent Publication 0173494, United Kingdom Patent GB 2177096B.
Humanized antibodies may also be produced, for example, using transgenic mice that express human heavy and light chain genes, but are incapable of expressing the endogenous mouse immunoglobulin heavy and light chain genes. Winter describes an exemplary CDR-grafting method that may be used to prepare the humanized antibodies described herein (U.S. Pat. No. 5,225,539). All of the CDRs of a particular human antibody may be replaced with at least a portion of a non-human CDR, or only some of the CDRs may be replaced with non-human CDRs. It is only necessary to replace the number of CDRs required for binding of the humanized antibody to a predetermined antigen.
Humanized antibodies, or fragments thereof, can be generated by replacing sequences of the Fv variable domain that are not directly involved in antigen binding with equivalent sequences from human Fv variable domains. Exemplary methods for generating humanized antibodies or fragments thereof are provided by Morrison (1985) Science 229:1202-1207; by Oi et al. (1986) BioTechniques 4:214; and by U.S. Pat. No. 5,585,089; U.S. Pat. No. 5,693,761; U.S. Pat. No. 5,693,762; U.S. Pat. No. 5,859,205; and U.S. Pat. No. 6,407,213. Those methods include isolating, manipulating, and expressing the nucleic acid sequences that encode all or part of immunoglobulin Fv variable domains from at least one of a heavy or light chain. Such nucleic acids may be obtained from a hybridoma producing an antibody against a predetermined target, as described above, as well as from other sources. The recombinant DNA encoding the humanized antibody molecule can then be cloned into an appropriate expression vector.
One system useful for generating hybridomas which produce human monoclonal antibodies of the invention is the murine system. Hybridoma production in the mouse is well known in the art, including immunization protocols and techniques for isolating and fusing immunized splenocytes. In one embodiment, human monoclonal antibodies directed against SOD1 are generated using transgenic mice carrying parts of the human immune system rather than the mouse system. In one embodiment, the invention employs transgenic mice, referred to herein as “HuMAb mice” which contain a human immunoglobulin gene miniloci that encodes unrearranged human heavy (μ and γ) and K light chain immunoglobulin sequences, together with targeted mutations that inactivate the endogenous μ and K chain loci (Lonberg, N. et al. (1994) Nature 368(6474): 856-859). Accordingly, the mice exhibit reduced expression of mouse IgM or K, and in response to immunization, the introduced human heavy and light chain transgenes undergo class switching and somatic mutation to generate high affinity human IgGκ monoclonal antibodies (Lonberg, N. et al. (1994), supra; reviewed in Lonberg, N. (1994) Handbook of Experimental Pharmacology 113:49-101; Lonberg, N. and Huszar, D. (1995) Intern. Rev. Immunol. 13: 65-93, and Harding, F. and Lonberg, N. (1995) Ann. NY. Acad. Sci 764:536-546).
To generate fully human monoclonal antibodies to SOD1, transgenic mice containing human immunoglobulin genes can be immunized with a purified or enriched preparation of the SOD1 antigen (or epitope fragments thereof as described herein) and/or cells expressing SOD1, as described, for example, by Lonberg et al. (1994) Nature 368(6474): 856-859; Fishwild et al. (1996) Nature Biotechnology 14: 845-851 and WO 98/24884. As described herein, HuMAb mice are immunized with recombinant SOD1 proteins. Alternatively, mice can be immunized with DNA encoding SOD1. Preferably, the mice will be 6-16 weeks of age upon the first infusion. For example, a purified or enriched preparation (10-100 μg) of the recombinant SOD1 antigen can be used to immunize the HuMAb mice intraperitoneally.
To generate hybridomas producing human monoclonal antibodies to SOD1, splenocytes and lymph node cells from immunized mice can be isolated and fused to an appropriate immortalized cell line, such as a mouse myeloma cell line. The resulting hybridomas can then be screened for the production of antigen-specific antibodies. Methods for screening antibodies are known in the art and include ELISA, FLISA (fluorescence-linked immunosorbent assay), and surface plasmon resonance.
Human antibodies of the invention also can be produced in a host cell using, for example, a combination of recombinant DNA techniques and gene transfection methods as is well known in the art (Morrison, S. (1985) Science 229:1202).
For example, in one embodiment, the gene(s) of interest, e.g., human antibody genes, can be ligated into an expression vector such as a eukaryotic expression plasmid, examples of which are well known in the art. The purified plasmid with the cloned antibody genes can be introduced in eukaryotic host cells such as CHO-cells or NSO-cells or alternatively other eukaryotic cells like a plant derived cells, fungi or yeast cells. Exemplary methods used to introduce these genes are described in the art and include electroporation, lipofectin, lipofectamine, or other. After introducing these antibody genes in the host cells, cells expressing the antibody can be identified and selected. These cells can then be amplified for their expression level and scaled up to produce antibodies. Recombinant antibodies can be isolated and purified from these culture supernatants and/or cells.
A leader sequence that includes a secretion sequence is generally included. Non-limiting examples include the amino acid and nucleic acid sequences for each of the antibodies with a leader sequence as provided in SEQ ID NOs: 233-306. Alternatively, a leader that improves antibody expression when compared to the native leader could be included, such as the osteonectin leader (SEQ ID NOs: 350-351). It should be noted that, after secretion of the antibody, the leader sequence is cleaved and the final antibody product does not include the leader sequence.
The cloned antibody genes can be alternatively expressed in other expression systems such as E. coli or in complete organisms or can be synthetically expressed. In one example of synthetic expression, vectors are used that include CDR sequences from the specific naturally occurring antibody grafted onto framework sequences from a different antibody with different properties (see, e.g., Riechmann, L. et al, 1998, Nature 332:323-327; Jones, P. et al, 1986, Nature 321:522-525; and Queen, C. et al., 1989, Proc. Natl. Acad. Sci. U.S.A. 86: 10029-10033). Such framework sequences can be obtained from public DNA databases that include germline antibody gene sequences. These germline sequences will differ from mature antibody gene sequences because they will not include completely assembled variable genes, which are formed by V(D)J joining during B cell maturation. Germline gene sequences will also differ from the sequences of a high affinity secondary repertoire antibody at individual residues evenly across the variable region. For example, somatic mutations are relatively infrequent in the amino terminal portion of framework region 1 and in the carboxy-terminal portion of framework region 4. Furthermore, many somatic mutations do not significantly alter the binding properties of the antibody. For this reason, it is not necessary to obtain the entire DNA sequence of a particular antibody in order to recreate an intact recombinant antibody having binding properties similar to those of the original antibody. Partial heavy and light chain sequence spanning the CDR regions is typically sufficient for this purpose. The partial sequence is used to determine which germline variable and joining gene segments contributed to the recombined antibody variable genes. The germline sequence is then used to fill in missing portions of the variable regions. Heavy and light chain leader sequences are cleaved during protein maturation and do not contribute to the properties of the final antibody. To add missing sequences, cloned cDNA sequences can be combined with synthetic oligonucleotides by ligation or PCR amplification. Alternatively, the entire variable region can be synthesized as a set of short, overlapping, oligonucleotides and combined by PCR amplification to create an entirely synthetic variable region clone. This process has certain advantages such as elimination or inclusion or particular restriction sites, or optimization of particular codons.
Plasmids for use in construction of expression vectors can be constructed so that PCR amplified V heavy and V kappa light chain cDNA sequences can be used to reconstruct complete heavy and light chain minigenes. These plasmids can be used to express completely human IgG1K or IgG4K antibodies. Fully human and chimeric antibodies of the present invention also include IgG2, IgG3, IgE, IgA, IgM, and IgD antibodies. Similar plasmids can be constructed for expression of other heavy chain isotypes, or for expression of antibodies comprising lambda light chains. Thus, in another aspect of the invention, one or more structural features of an anti-SOD1 antibody of the invention are used to create structurally related human anti-SOD1 antibodies that retain at least one functional property of the antibodies of the invention, such as, for example, binding to SOD1 or clearance of SOD1 (i.e., reducing levels of wild-type, aggregated, misfolded, or mutant SOD1, or combinations thereof). In one embodiment, one or more CDR regions of antibodies of the invention can be combined recombinantly with known human framework regions and CDRs to create additional, recombinantly-engineered, human anti-SOD1 antibodies of the invention. The heavy and light chain variable framework regions can be derived from the same or different human antibody sequences. The human antibody sequences can be the sequences of naturally occurring human antibodies or can be consensus sequences of several human antibodies. See Kettleborough et al, Protein Engineering 4:773 (1991); Kolbinger et al, Protein Engineering 6:971 (1993) and Carter et al, WO 92/22653.
For additional antibody production techniques, see Antibodies: A Laboratory Manual, eds. Harlow et al., Cold Spring Harbor Laboratory, 1988. The present invention is not necessarily limited to any particular source, method of production, or other special characteristics of an antibody.
IV. Antibody Modifications
The anti-SOD1 antibodies of the invention may include additional modifications including but not limited to modifications to the amino acid sequence of the antibody (e.g., the variable regions) and post-translational modifications. Modifications to the anti-SOD1 antibodies may provide additional advantages such as increased affinity; decreased off-rate; increased solubility, stability, and in vivo or in vitro circulating time of the antibody; decreased immunogenicity; or reduced susceptibility to post-translational modifications. Post-translational modifications include, for example, acetylation, acylation, ADP-ribosylation, amidation, deamidation, covalent attachment of flavin, covalent attachment of a heme moiety, covalent attachment of a nucleotide or nucleotide derivative, covalent attachment of a lipid or lipid derivative, covalent attachment of phosphotidylinositol, cross-linking, cyclization, disulfide bond formation, isomerization, demethylation, formation of covalent cross-links, formation of cysteine, formation of pyroglutamate, formylation, gamma-carboxylation, glycosylation, GPI anchor formation, hydroxylation, hydrolysis, iodination, methylation, myristoylation, oxidation, pegylation, proteolytic processing, phosphorylation, prenylation, racemization, selenoylation, sulfation, transfer-RNA mediated addition of amino acids to proteins such as arginylation, and ubiquitination (see, for example, Creighton, “Proteins: Structures and Molecular Properties,” 2nd Ed., W. H. Freeman and Co., N.Y., 1992; “Postranslational Covalent Modification of Proteins,” Johnson, ed., Academic Press, New York, 1983; Seifter et al., Meth. Enzymol., 182:626-646, 1990; Rattan et al., Ann. N.Y. Acad. Sci., 663:48-62, 1992). Additionally, the anti-SOD1 antibodies of the invention may include, for example, e.g., N-linked or O-linked carbohydrate chains, processing of N-terminal or C-terminal ends, attachment of chemical moieties to the amino acid backbone, chemical modifications of N-linked or O-linked carbohydrate chains, and addition or deletion of an N-terminal methionine residue as a result of prokaryotic host cell expression.
The invention also includes chemically-modified derivatives of the anti-SOD1 antibodies of the invention, which may provide additional advantages such as increased solubility, stability, and circulating time of the polypeptide, or decreased immunogenicity (see, e.g., U.S. Pat. No. 4,179,337; incorporated by reference). The chemical moieties for derivitization may be selected from water soluble polymers such as, for example, polyethylene glycol, ethylene glycol/propylene glycol copolymers, carboxymethylcellulose, dextran, polyvinyl alcohol, and the like. The anti-SOD1 antibodies of the invention may be modified at random positions within the molecule, or at predetermined positions within the molecule and may include one, two, or three or more attached chemical moieties.
The polymer may be of any molecular weight, and may be branched or unbranched. For polyethylene glycol, the preferred molecular weight is between about 1 kDa and about 100 kDa (the term “about” indicating that in preparations of polyethylene glycol, some molecules will weigh more, some less, than the stated molecular weight) for ease in handling and manufacturing. Other sizes may be used, depending on the desired therapeutic profile (e.g., the duration of sustained release desired, the effects, if any on biological activity, the ease in handling, the degree or lack of antigenicity and other known effects of the polyethylene glycol to a therapeutic protein or analog). As noted above, the polyethylene glycol may have a branched structure. Branched polyethylene glycols are described, for example, in U.S. Pat. No. 5,643,575 (incorporated by reference); Morpurgo et al., Appl. Biochem. Biotechnol. 56:59-72, 1996; Vorobjev et al., Nucleosides Nucleotides 18:2745-2750, 1999; and Caliceti et al., Bioconjug. Chem. 10:638-646, 1999, the disclosures of each of which are incorporated by reference.
The anti-SOD1 antibodies of the invention may also be modified with a detectable label, including, but not limited to, an enzyme, prosthetic group, fluorescent material, luminescent material, bioluminescent material, radioactive material, positron emitting metal, nonradioactive paramagnetic metal ion, and affinity label for detection and isolation of SOD1. The detectable substance may be coupled or conjugated either directly to the polypeptides of the invention or indirectly, through an intermediate (such as, for example, a linker known in the art) using techniques known in the art. Non-limiting examples of suitable enzymes include horseradish peroxidase, alkaline phosphatase, (3-galactosidase, glucose oxidase, or acetylcholinesterase; non-limiting examples of suitable prosthetic group complexes include streptavidin/biotin and avidin/biotin; non-limiting examples of suitable fluorescent materials include biotin, umbelliferone, fluorescein, fluorescein isothiocyanate, rhodamine, dichlorotriazinylamine fluorescein, dansyl chloride, or phycoerythrin; an example of a luminescent material includes luminol; non-limiting examples of bioluminescent materials include luciferase, luciferin, and aequorin; and examples of suitable radioactive material include a radioactive metal ion, e.g., alpha-emitters or other radioisotopes such as, for example, iodine (131I, 125I, 123I, 121I), carbon (14C), sulfur (35S), tritium (3H), indium (115mIn, 113mIn, 112In, 111In), and technetium (99Tc, 9 mTc), thallium (201Ti), gallium (68Ga, 67Ga), palladium (163Pd), molybdenum (99Mo), xenon (133Xe), fluorine (18F), 153Sm, Lu, 159Gd, 149Pm, 140La, 175Yb, 166He, 90Y, 47Sc, 86R, 188Re, 142Pr, 150Rh, 97Ru, 68Ge, 57Co, 65Zn, 85Sr, 32P, 153Gd, 169Yb, 51Cr, 54Mn, 75Se, and tin (113Sn, 117Sn). The detectable substance may be coupled or conjugated either directly to the anti-SOD1 antibodies of the invention or indirectly, through an intermediate (such as, for example, a linker known in the art) using techniques known in the art. Anti-SOD1 antibodies conjugated to a detectable substance may be used for diagnostic assays as described herein.
In another embodiment, the antibody CDR or FR sequences may be mutated to increase or improve, for example, binding affinity, binding specificity, or stability. In one embodiment, mutagenesis is used to make an antibody more similar to one or more germline sequences. This may be desirable when mutations are introduced into the framework region of an antibody through somatic mutagenesis or through error prone PCR. Germline sequences for the VH and VL domains can be identified by performing amino acid and nucleic acid sequence alignments against the VBASE database (MRC Center for Protein Engineering, UK). VBASE is a comprehensive directory of all human germline variable region sequences compiled from over a thousand published sequences, including those in the current releases of the Genbank and EMBL data libraries. In some embodiments, the FR regions of the scFvs are mutated in conformity with the closest matches in the VBASE database and the CDR portions are kept intact. Non-limiting examples of alterations to the CDR or FR sequences described herein include the antibodies labeled “M1” provided in Tables 1 and 2 and in FIGS. 3, 6, 9, 12, 15, 18, 19, 22, 25, 28, and 33.
In certain embodiments, a chimeric, humanized, or fully human antibody is optimized by the introduction of conservative substitutions, consensus sequence substitutions, germline substitutions and/or back mutations. Such altered immunoglobulin molecules can be made by any of several techniques known in the art, (e.g., Teng et al., Proc. Natl. Acad. Sci. U.S.A., 80: 7308-7312, 1983; Kozbor et al., Immunology Today, 4: 7279, 1983; Olsson et al., Meth. Enzymol., 92: 3-16, 1982), and may be made according to the teachings of PCT Publication WO92/06193 or EP 0239400).
An antibody or fragment thereof may also be modified by specific deletion of human T cell epitopes or “deimmunization” by the methods disclosed in WO 98/52976 and WO 00/34317. Briefly, the heavy and light chain variable domains of an antibody can be analyzed for peptides that bind to MHC Class II; these peptides represent potential T-cell epitopes (as defined in WO 98/52976 and WO 00/34317). For detection of potential T-cell epitopes, a computer modeling approach termed “peptide threading” can be applied, and in addition a database of human MHC class II binding peptides can be searched for motifs present in the VH and VL sequences, as described in WO 98/52976 and WO 00/34317. These motifs bind to any of the 18 major MHC class II DR allotypes, and thus constitute potential T cell epitopes. Potential T-cell epitopes detected can be eliminated by substituting small numbers of amino acid residues in the variable domains, or preferably, by single amino acid substitutions. Typically, conservative substitutions are made. Often, but not exclusively, an amino acid common to a position in human germline antibody sequences may be used. Human germline sequences, e.g., are disclosed in Tomlinson, et al. (1992) J. Mol. Biol. 227:776-798; Cook, G. P. et al. (1995) Immunol. Today Vol. 16 (5): 237-242; Chothia, D. et al. (1992) J. Mol. Biol. 227:799-817; and Tomlinson et al. (1995) EMBO J. 14:4628-4638. The V BASE directory provides a comprehensive directory of human immunoglobulin variable region sequences (compiled by Tomlinson, I. A. et al. MRC Centre for Protein Engineering, Cambridge, UK). These sequences can be used as a source of human sequence, e.g., for framework regions and CDRs. Consensus human framework regions can also be used, e.g., as described in U.S. Pat. No. 6,300,064.
In another embodiment, the serum half-life can also be increased, for example, by attaching additional polypeptide sequences. For example, antibodies of this invention or additional polypeptides containing the amino acid sequences of this invention can be attached to serum albumin or a portion of serum albumin that binds to the FcRn receptor or a serum albumin binding peptide so that serum albumin binds to the antibody or polypeptide, e.g., such polypeptide sequences are disclosed in WO 01/45746. To increase the half-life of the antibodies or polypeptide containing the amino acid sequences of this invention, one can attach a salvage receptor binding epitope to the antibody (especially an antibody fragment), as described, e.g., in U.S. Pat. No. 5,739,277. For example, a nucleic acid molecule encoding the salvage receptor binding epitope can be linked in frame to a nucleic acid encoding a polypeptide sequence of this invention so that the fusion protein expressed by the engineered nucleic acid molecule comprises the salvage receptor binding epitope and a polypeptide sequence of this invention. As used herein, the term “salvage receptor binding epitope” refers to an epitope of the Fc region of an IgG molecule (e.g., IgG1, IgG2, IgG3, or IgG4) that is responsible for increasing the in vivo serum half-life of the IgG molecule (e.g., Ghetie et al., Ann. Rev. Immunol. 18:739-766, 2000). In one preferred embodiment, the serum albumin peptide to be attached comprises an amino acid sequence of DICLPRWGCLW (SEQ ID NO: 352).
The disclosed antibodies can be modified to alter their glycosylation; that is, at least one carbohydrate moiety can be deleted or added to the antibody. Deletion or addition of glycosylation sites can be accomplished by changing amino acid sequence to delete or create glycosylation consensus sites, which are well known in the art. Another means of adding carbohydrate moieties is the chemical or enzymatic coupling of glycosides to amino acid residues of the antibody (see WO 87/05330 and Aplin et al. (1981) CRC Crit. Rev. Biochem., 22: 259-306). Removal of carbohydrate moieties can also be accomplished chemically or enzymatically (see Hakimuddin et al. (1987) Arch. Biochem. Biophys., 259: 52; Edge et al. (1981) Anal. Biochem., 118: 131; Thotakura et al. (1987) Meth. Enzymol., 138: 350).
In certain embodiments, an anti-SOD1 antibody of the invention can contain an altered immunoglobulin constant or Fc region. For example, an antibody produced in accordance with the teachings herein may bind more strongly or with more specificity to effector molecules such as complement and/or Fc receptors, which can control several immune functions of the antibody such as effector cell activity, lysis, complement-mediated activity, antibody clearance, and antibody half-life. Typical Fc receptors that bind to an Fc region of an antibody (e.g., an IgG antibody) include, but are not limited to, receptors of the FcγRI, FcγRII, and FcγRIII and FcRn subclasses, including allelic variants and alternatively spliced forms of these receptors. Fc receptors are reviewed in Ravetch and Kinet, Annu. Rev. Immunol 9:457-92, 1991; Capel et al., Immunomethods 4:25-34, 1994; and de Haas et al., J. Lab. Clin. Med. 126:330-41, 1995).
In one example, replacing residue 297 (asparagine) with alanine in the IgG constant region significantly inhibits recruitment of effector cells, while only slightly reducing (about three fold weaker) affinity for Clq (see e.g., U.S. Pat. No. 5,624,821). The numbering of the residues in the heavy chain is that of the EU index (see Kabat et al., 1991 supra). This alteration destroys the glycosylation site and it is believed that the presence of carbohydrate is required for Fc receptor binding. Any other substitution at this site that destroys the glycosylation site is believed to cause a similar decrease in lytic activity. Other amino acid substitutions, e.g., changing any one of residues 318 (Glu), 320 (Lys) and 322 (Lys), to Ala, are also known to abolish Clq binding to the Fc region of IgG antibodies (see e.g., U.S. Pat. No. 5,624,821).
In addition, modified antibodies can be produced which have a reduced interaction with an Fc receptor. For example, it has been shown that in human IgG3, which binds to the human Fcγ R1 receptor, changing Leu 235 to Glu destroys its interaction with the receptor. Mutations on adjacent or close sites in the hinge link region of an antibody (e.g., replacing residues 234, 236 or 237 with Ala) can also be used to affect antibody affinity for the Fcγ R1 receptor. The numbering of the residues in the heavy chain is based in the EU index (see Kabat et al., 1991 supra).
One of skill in the art will appreciate that the modifications described above are not all-exhaustive, and that many other modifications are obvious to a skilled artisan in light of the teachings of the present disclosure.
V. Antibody Conjugates/immunotoxins
In another aspect, the present invention features an anti-SOD1 monoclonal antibody conjugated to a therapeutic moiety, such as a cytotoxin, a drug (e.g., an immunosuppressant) or a radioisotope. When conjugated to a cytotoxin, these antibody conjugates are referred to as “immunotoxins.” A cytotoxin or cytotoxic agent includes any agent that is detrimental to (e.g., kills) cells. Examples include taxol, cytochalasin B, gramicidin D, ethidium bromide, emetine, mitomycin, etoposide, tenoposide, vincristine, vinblastine, colchicin, doxorubicin, daunorubicin, dihydroxy anthracin dione, mitoxantrone, mithramycin, actinomycin D, 1-dehydrotestosterone, glucocorticoids, procaine, tetracaine, lidocaine, propranolol, and puromycin and analogs or homologs thereof. Therapeutic agents include, but are not limited to, antimetabolites (e.g., methotrexate, 6-mercaptopurine, 6-thio guanine, cytarabine, 5-fluorouracil decarbazine), alkylating agents (e.g., mechlorethamine, thioepa chlorambucil, melphalan, carmustine (BSNU) and lomustine (CCNU), cyclophosphamide, busulfan, dibromomannitol, streptozotocin, mitomycin C, and cis-dichlorodiamine platinum (II) (DDP) cisplatin), anthracyclines (e.g., daunorubicin (formerly daunomycin) and doxorubicin), antibiotics (e.g., dactinomycin (formerly actinomycin), bleomycin, mithramycin, and anthramycin (AMC)), and anti-mitotic agents (e.g., vincristine and vinblastine). An antibody of the present invention may also be conjugated to a radioisotope, e.g., radioactive iodine, to generate cytotoxic radiopharmaceuticals.
The antibody conjugates of the invention may be used to modify a given biological response. The therapeutic moiety is not to be construed as limited to compound or a nucleic acid molecule possessing a desired biological activity. Such proteins may include, for example, an enzymatically active toxin, or active fragment thereof, such as abrin, ricin A, pseudomonas exotoxin, or diphtheria toxin; a protein such as tumor necrosis factor or interferon-γ; or, biological response modifiers such as, for example, lymphokines, interleukin-1 (“IL-I”), interleukin-2 (“IL-2”), interleukin-6 (“EL-6”), granulocyte macrophage colony stimulating factor (“GM-CSF”), granulocyte colony stimulating factor (“G-CSF”), or other cytokines or growth factors. Techniques for conjugating a therapeutic moiety to antibodies are well known, see, e.g., Arnon et al, “Monoclonal Antibodies For Immunotargeting Of Drugs In Cancer Therapy”, in Monoclonal Antibodies And Cancer Therapy, Reisfeld et al (eds.), pp. 243-56 (Alan R. Liss, Inc. 1985); Hellstrom et al, “Antibodies For Drug Delivery”, in Controlled Drug Delivery (2nd Ed.), Robinson et al. (eds.), pp. 623-53 (Marcel Dekker, Inc. 1987); Thorpe, “Antibody Carriers Of Cytotoxic Agents In Cancer Therapy: A Review”, in Monoclonal Antibodies '84: Biological And Clinical Applications, Pinchera et al. (eds.), pp. 475-506 (1985); “Analysis, Results, And Future Prospective Of The Therapeutic Use Of Radiolabeled Antibody In Cancer Therapy”, in Monoclonal Antibodies For Cancer Detection And Therapy, Baldwin et al. (eds.), pp. 303-16 (Academic Press 1985), and Thorpe et al., “The Preparation And Cytotoxic Properties Of Antibody-Toxin Conjugates”, Immunol. Rev., 62: 119-58 (1982). In one non-limiting example, any anti-SOD1 antibody of the invention can be conjugated to an inhibitory nucleic acid molecule (e.g., siRNA, microRNA, and the like) to downregulate or reduce expression of the disease associated SOD1 protein. In such an example, the anti-SOD1 antibody is effective in directing the inhibitory nucleic acid molecule to the target cell and/or clearing the misfolded or mutant SOD1 already present, and the inhibitory nucleic acid molecule prevents or reduces further production of the mutant or misfolded SOD1. Methods for conjugation of an anti-SOD1 antibody to an inhibitory nucleic acid molecule are known in the art. (See, for example, U.S. Pat. No. 5,276,140 and PCT publication number WO 2009/143345 for disclosures of techniques useful for conjugation of inhibitory nucleic acid molecules to a protein.)
VI. Pharmaceutical Compositions
The present invention provides a composition, e.g., a pharmaceutical composition, containing one or a combination (e.g., two or more) of monoclonal antibodies, or antigen-binding portion(s) thereof, of the present invention, formulated together with a pharmaceutically acceptable carrier. In one embodiment, the pharmaceutical composition includes two or more anti-SOD1 antibodies of the invention, wherein each of the antibodies of the composition binds to a distinct epitope of SOD1.
Pharmaceutical compositions of the invention also can be administered in combination therapy, i.e., combined with other agents. For example, the combination therapy can include a composition of the present invention with at least one or more additional therapeutic agents, such as riluzole. As used herein, “pharmaceutically acceptable carrier” includes any and all solvents, dispersion media, coatings, antibacterial and antifungal agents, isotonic and absorption delaying agents, and the like that are physiologically compatible. Preferably, the carrier is suitable for intravenous, intrathecal, intramuscular, subcutaneous, parenteral, spinal or epidermal administration (e.g., by injection or infusion). Depending on the route of administration, the active compound, i.e., anti-SOD antibodies of the invention or nucleic acids of the invention, may be coated in a material to protect the compound from the action of acids and other natural conditions that may inactivate the compound.
A composition of the present invention can be administered by a variety of methods known in the art. As will be appreciated by the skilled artisan, the route and/or mode of administration will vary depending upon the desired results. Administration may be parenteral, intravenous, intrathecal, subcutaneous, oral, topical, or local, for example, by direct injection into the cerebrospinal fluid. Intravenous delivery by continuous infusion is one exemplary method for administering the therapeutic antibodies of the present invention. Intrathecal delivery (e.g., using an intrathecal pump) is another exemplary method for administering the therapeutic antibodies of the invention. The therapeutic compound may be in the form of a solution, a suspension, an emulsion, an infusion device, or a delivery device for implantation, or it may be presented as a dry powder to be reconstituted with water or another suitable vehicle before use. The composition can be in the form of a pill, tablet, capsule, liquid, or sustained release tablet for oral administration; or a liquid for intravenous, intrathecal, subcutaneous or parenteral administration; or a polymer or other sustained release vehicle for local administration.
Methods well known in the art for making formulations are found, for example, in “Remington: The Science and Practice of Pharmacy” (20th ed., ed. A. R. Gennaro A R., 2000, Lippincott Williams & Wilkins, Philadelphia, Pa.). Formulations for parenteral administration may, for example, contain excipients, sterile water, saline, polyalkylene glycols such as polyethylene glycol, oils of vegetable origin, or hydrogenated napthalenes. Biocompatible, biodegradable lactide polymer, lactide/glycolide copolymer, or polyoxyethylene-polyoxypropylene copolymers may be used to control the release of the compounds. Nanoparticulate formulations (e.g., biodegradable nanoparticles, solid lipid nanoparticles, liposomes) may be used to control the biodistribution of the compounds. Other potentially useful delivery systems include ethylene-vinyl acetate copolymer particles, osmotic pumps, intrathecal pumps, implantable infusion systems, and liposomes. The concentration of the compound in the formulation varies depending upon a number of factors, including the dosage of the drug to be administered, and the route of administration.
The active compounds can be prepared with carriers that will protect the compound against rapid release, such as a controlled release formulation, including implants, transdermal patches, and microencapsulated delivery systems. Biodegradable, biocompatible polymers can be used, such as ethylene vinyl acetate, polyanhydrides, polyglycolic acid, collagen, polyorthoesters, and polylactic acid. Examples of pharmaceutically-acceptable antioxidants include: (1) water soluble antioxidants, such as ascorbic acid, cysteine hydrochloride, sodium bisulfate, sodium metabisulfite, sodium sulfite and the like; (2) oil-soluble antioxidants, such as ascorbyl palmitate, butylated hydroxyanisole (BHA), butylated hydroxytoluene (BHT), lecithin, propyl gallate, alpha-tocopherol, and the like; and (3) metal chelating agents, such as citric acid, ethylenediamine tetraacetic acid (EDTA), sorbitol, tartaric acid, phosphoric acid, and the like. Many methods for the preparation of such formulations are generally known to those skilled in the art. See, e.g., Sustained and Controlled Release Drug Delivery Systems, J R. Robinson, ed., Marcel Dekker, Inc., New York, 1978.
To administer a compound of the invention by certain routes of administration, it may be necessary to coat the compound with, or co-administer the compound with, a material to prevent its inactivation. For example, the compound may be administered to a subject in an appropriate carrier, for example, liposomes, or a diluent. Pharmaceutically acceptable diluents include saline and aqueous buffer solutions. Liposomes include water-in-oil-in-water CGF emulsions as well as conventional liposomes (Strejan et al. (1984) J. Neuroimmunol. 7:27). Pharmaceutically acceptable carriers include sterile aqueous solutions or dispersions and sterile powders for the extemporaneous preparation of sterile injectable solutions or dispersion. The use of such media and agents for pharmaceutically active substances is known in the art and is included in the invention except where any conventional media or agent is incompatible with the active compound. Supplementary active compounds can also be incorporated into the compositions.
Therapeutic compositions typically must be sterile and stable under the conditions of manufacture and storage. The composition can be formulated as a solution, microemulsion, liposome, or other ordered structure suitable to high drug concentration. The carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. The proper fluidity can be maintained, for example, by the use of a coating such as lecithin, by the maintenance of the required particle size in the case of dispersion and by the use of surfactants. In many cases, it will be preferable to include isotonic agents, for example, sugars, polyalcohols such as mannitol, sorbitol, or sodium chloride in the composition. Prolonged absorption of the injectable compositions can be brought about by including in the composition an agent that delays absorption, for example, monostearate salts and gelatin.
Sterile injectable solutions can be prepared by incorporating the active compound in the required amount in an appropriate solvent with one or a combination of ingredients enumerated above, as required, followed by sterilization microfiltration. Generally, dispersions are prepared by incorporating the active compound into a sterile vehicle that contains a basic dispersion medium and the required other ingredients from those enumerated above. In the case of sterile powders for the preparation of sterile injectable solutions, the preferred methods of preparation are vacuum drying and freeze-drying (lyophilization) that yield a powder of the active ingredient plus any additional desired ingredient from a previously sterile-filtered solution thereof. Dosage regimens are adjusted to provide the optimum desired response (e.g., a therapeutic response). For example, a single bolus may be administered, several divided doses may be administered over time or the dose may be proportionally reduced or increased as indicated by the exigencies of the therapeutic situation. For example, the human antibodies of the invention may be administered once or twice weekly by subcutaneous injection or once or twice monthly by subcutaneous injection.
It is especially advantageous to formulate parenteral compositions in dosage unit form for ease of administration and uniformity of dosage. Dosage unit form as used herein refers to physically discrete units suited as unitary dosages for the subjects to be treated; each unit contains a predetermined quantity of active compound calculated to produce the desired therapeutic effect in association with the required pharmaceutical carrier. The specification for the dosage unit forms of the invention are dictated by and directly dependent on (a) the unique characteristics of the active compound and the particular therapeutic effect to be achieved, and (b) the limitations inherent in the art of compounding such an active compound for the treatment of sensitivity in individuals.
The phrases “parenteral administration” and “administered parenterally” as used herein mean modes of administration other than enteral and topical administration, usually by injection, and include, without limitation, intravenous, intramuscular, intraarterial, intrathecal, intracapsular, intraorbital, intracardiac, intradermal, intraperitoneal, transtracheal, subcutaneous, subcuticular, intraarticular, subcapsular, subarachnoid, intraspinal, epidural and intrasternal injection and infusion. Examples of suitable aqueous and nonaqueous carriers which may be employed in the pharmaceutical compositions of the invention include water, ethanol, polyols (such as glycerol, propylene glycol, polyethylene glycol, and the like), and suitable mixtures thereof, vegetable oils, such as olive oil, and injectable organic esters, such as ethyl oleate. Proper fluidity can be maintained, for example, by the use of coating materials, such as lecithin, by the maintenance of the required particle size in the case of dispersions, and by the use of surfactants.
Compositions of the invention may also contain adjuvants such as preservatives, wetting agents, emulsifying agents and dispersing agents. Prevention of presence of microorganisms may be ensured both by sterilization procedures, and by the inclusion of various antibacterial and antifungal agents, for example, paraben, chlorobutanol, phenol sorbic acid, and the like. It may also be desirable to include isotonic agents, such as sugars, sodium chloride, and the like into the compositions. In addition, prolonged absorption of the injectable pharmaceutical form may be brought about by the inclusion of agents which delay absorption such as aluminum monostearate and gelatin.
When the compounds of the present invention are administered as pharmaceuticals, to humans and animals, they can be given alone or as a pharmaceutical composition containing, for example, 0.001 to 90% (more preferably, 0.005 to 70%, such as 0.01 to 30%) of active ingredient in combination with a pharmaceutically acceptable carrier.
For intravenous or intrathecal delivery or direct injection, the composition must be sterile and fluid to the extent that the composition is deliverable by syringe. In addition to water, the carrier can be an isotonic buffered saline solution, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. Proper fluidity can be maintained, for example, by use of coating such as lecithin, by maintenance of required particle size in the case of dispersion and by use of surfactants. In many cases, it is preferable to include isotonic agents, for example, sugars, polyalcohols such as mannitol or sorbitol, and sodium chloride in the composition. Long-term absorption of the injectable compositions can be brought about by including in the composition an agent which delays absorption, for example, aluminum monostearate or gelatin.
Regardless of the route of administration selected, the compounds of the present invention, which may be used in a suitable hydrated form, and/or the pharmaceutical compositions of the present invention, are formulated into pharmaceutically acceptable dosage forms by conventional methods known to those of skill in the art. Actual dosage levels of the active ingredients in the pharmaceutical compositions of the present invention may be varied so as to obtain an amount of the active ingredient which is effective to achieve the desired therapeutic response for a particular patient, composition, and mode of administration, without being toxic to the patient. The selected dosage level will depend upon a variety of pharmacokinetic factors including the activity of the particular compositions of the present invention employed, or the ester, salt or amide thereof, the route of administration, the time of administration, the rate of excretion of the particular compound being employed, the duration of the treatment, other drugs, compounds and/or materials used in combination with the particular compositions employed, the age, sex, weight, condition, general health and prior medical history of the patient being treated, and like factors well known in the medical arts. A physician or veterinarian having ordinary skill in the art can readily determine and prescribe the effective amount of the pharmaceutical composition required. For example, the physician or veterinarian can start doses of the compounds of the invention employed in the pharmaceutical composition at levels lower than that required in order to achieve the desired therapeutic effect and gradually increase the dosage until the desired effect is achieved. In general, a suitable daily dose of a composition of the invention will be that amount of the compound which is the lowest dose effective to produce a therapeutic effect. Such an effective dose will generally depend upon the factors described above. If desired, the effective daily dose of a therapeutic composition may be administered as two, three, four, five, six or more sub-doses administered separately at appropriate intervals throughout the day, optionally, in unit dosage forms. While it is possible for a compound of the present invention to be administered alone, it is preferable to administer the compound as a pharmaceutical formulation (composition).
Therapeutic compositions can be administered with medical devices known in the art. Examples of well-known implants, delivery systems, and modules useful in the present invention are known to those skilled in the art.
In certain embodiments, the human monoclonal antibodies of the invention can be formulated to ensure proper distribution in vivo. For example, the blood-brain barrier (BBB) excludes many highly hydrophilic compounds. To ensure that the therapeutic compounds of the invention cross the BBB (if desired) they can be formulated, for example, in liposomes. For methods of manufacturing liposomes, see, e.g., U.S. Pat. Nos. 4,522,811; 5,374,548; and 5,399,331. The liposomes may comprise one or more moieties which are selectively transported into specific cells or organs, thus enhancing targeted drug delivery (see, e.g., V. V. Ranade (1989) J. Clin. Pharmacol. 29:685). Exemplary targeting moieties include folate or biotin (see, e.g., U.S. Pat. No. 5,416,016 to Low et al); mannosides (Umezawa et al, (1988) Biochem. Biophys. Res. Commun 153:1038); antibodies (P. G. Bloeman of α/. (1995) FEBS Lett. 357:140; M. Owais et al. (1995) Antimicrob. Agents Chemother. 39:180); surfactant protein A receptor (Briscoe et al. (1995) Am. J. Physiol. 1233: 134), different species of which may comprise the formulations of the inventions, as well as components of the invented molecules; p120 (Schreier et al. (1994) J. Biol. Chem. 269:9090); see also K. Keinanen; M. L. Laukkanen (1994) FEBS Lett. 346: 123; U. Killion; U. Fidler (1994) Immunomethods 4:273. In one embodiment of the invention, the therapeutic compounds of the invention are formulated in liposomes; in a more preferred embodiment, the liposomes include a targeting moiety. The composition must be fluid to the extent that easy syringability exists. It must be stable under the conditions of manufacture and storage and must be preserved against the contaminating action of microorganisms such as bacteria and fungi.
VII. Therapeutic Applications
The anti-SOD1 antibodies of the invention, anti-SOD1 antibody nucleic acid molecules of the invention, and compositions thereof, are useful for treating, ameliorating the symptoms of, or preventing or decreasing the likelihood of developing ALS. The ability of the antibodies to treat, ameliorate one or more symptoms of, or prevent or decrease the likelihood of developing ALS can also be evaluated according to methods well known in the art.
In one example, the anti-SOD1 antibody of the invention is used to treat or ameliorate the symptoms of a subject (e.g., a human) already suffering from ALS. The therapeutic anti-SOD1 antibody may be administered until signs or symptoms of the disorder are improved or onset of the signs or symptoms is delayed. Signs or symptoms of ALS include, but are not limited to, difficulty breathing or swallowing; head drop due to weak spinal and neck muscles; muscle cramps; muscle weakness that worsens over time; muscle contractions; muscle spasms; paralysis; speech problems; voice changes; drooling; ankle, feet, and leg swelling; and weight loss. Measurement of the symptoms of ALS generally involves neurological examination, clinical testing, and patient input. The anti-SOD1 antibodies of the invention may also be used to prevent or delay onset of ALS in a subject known to be at risk for developing ALS.
The anti-SOD1 antibodies of the invention may be used alone or in combination with one or more additional therapeutic agents for the treatment or amelioration of symptoms of ALS. In one example, the additional therapeutic agent is riluzole. For combination therapies, the anti-SOD1 antibody may be administered before, simultaneously, or after the one or more additional therapeutic agent. The anti-SOD1 antibody and the additional therapeutic may optionally be in the same composition or packaged together in the same kit or package.
The invention also includes kits that include one, two, three, or more anti-SOD1 antibodies of the invention, and, optionally instructions for use. The kit can further include one or more additional agents useful for the treatment or amelioration of symptoms of ALS. In one example, the kit includes at least one anti-SOD1 antibody of the invention and riluzole and instructions for use of both.
VIII. Diagnostic Uses
The anti-SOD1 antibodies of the invention may also be used in methods and kits for the diagnosis of ALS or an increased risk of developing ALS. For the diagnostic methods and compositions, the antibody of the invention will preferably detect mutant or misfolded SOD1 and will not detect wild-type, natively folded SOD1. The anti-SOD1 antibody will bind to mutant or misfolded forms of SOD1 in a sample from a subject where a mutant or misfolded form of SOD1 is present or suspected to be present. If mutant or misfolded SOD1 is detected using an antibody of the invention, the subject may be diagnosed with ALS or an increased risk of developing ALS. The diagnostic methods and compositions can be used as an initial screen, a single test, or in conjunction with additional clinical and neurological testing used by a clinician in the diagnosis of ALS. In the diagnostic methods of the invention, the level of mutant or misfolded SOD1 protein detected in a subject sample may be compared to the level of mutant or misfolded SOD1 protein detected in a normal reference sample (e.g., a sample from a subject known not to have ALS or not be at risk for developing ALS). A positive signal in the subject sample and not in the normal reference sample is a diagnostic indicator of ALS or an increased risk of developing ALS. Diagnostic methods and compositions can include the use of diagnostic assays known in the art including, but not limited to, immunoassays and ELISAs.
IX. Examples
The following examples are intended to illustrate the invention. They are not meant to limit the invention in any way.
Materials and Methods
Throughout the examples, the following materials and methods were used unless otherwise stated.
In general, the practice of the present invention employs, unless otherwise indicated, conventional techniques of chemistry, molecular biology, recombinant DNA technology, immunology (especially, e.g., antibody technology), and standard techniques in polypeptide preparation. See, e.g., Sambrook, Fritsch and Maniatis, Molecular Cloning: Cold Spring Harbor Laboratory Press (1989); Antibody Engineering Protocols (Methods in Molecular Biology), 510, Paul, S., Humana Pr (1996); Antibody Engineering: A Practical Approach (Practical Approach Series, 169), McCafferty, Ed., Irl Pr (1996); Antibodies: A Laboratory Manual, Harlow et al., C.S.H.L. Press, Pub. (1999); and Current Protocols in Molecular Biology, eds. Ausubel et al., John Wiley & Sons (1992).
Synthesis of the Gene Encoding Human Superoxide Dismutase-1 (hSOD1)
Briefly, a nucleic acid sequence encoding hSOD1 (Genbank accession number AY450286, SEQ ID NO: 318) was obtained electronically. The nucleotide sequence was altered without changing the amino acid code to optimize expression in Escherichia coli (SEQ ID NO: 319). The alignment of the two versions of the hSOD1 gene is shown in FIG. 38. The sequence was purchased from Integrated DNA Technologies (IDT) and cloned into either pET32-a-myc or pGEX-4T-3 with BamHI and SalI in frame with the C-terminal myc and 6 histidine tags (for pET32-a-myc). The vectors were then sequenced to confirm the construct was correct.
Expression and Purification of Codon-optimized hSOD1
The hSOD1 expression vectors were transformed into BL21-DE3 E. coli bacteria (Invitrogen) and expression was induced with IPTG. Proteins expressed from pET32-a-myc contained an N-terminal thioredoxin (trx) domain and proteins expressed from pGEX-4T-3 contained an N-terminal glutathione sulfotransferase (GST) domain. Bacteria were lysed and the hSOD1 protein was purified with nickel affinity chromatography (pET32-a-myc) or glutathione affinity chromatography (pGEX-4T-3). Purified proteins were dialyzed against phosphate-buffered saline (PBS) and concentrated. Protein concentration was determined based on OD 280 nm and further evaluated by Coomassie stained SDS-PAGE and Western blot using mouse antibody specific for myc and histidine tags (pET32-a-myc) or rabbit polyclonal antibody directed against hSOD1. No exogenous copper or zinc was included in the expression or purification procedure. This would suggest that some proportion of the bacterially-expressed SOD1 is not fully metallated.
Oxidation and Reduction of hSOD1
For hSOD1 oxidation, bacterially-expressed hSOD1 (b-hSOD1) or commercially available hSOD1 purified from human erythrocytes (E-hSOD1, Sigma) were treated with 10 mM hydrogen peroxide for 24 hours at room temperature. Oxidized protein was desalted with ZEBA desalting columns and stored at −20° C. until use.
For reduction of hSOD1, b-hSOD1 or E-hSOD1 was treated with 100 mM dithiothreitol (DTT) and 2 mM ethylenediaminetetraacetic acid (EDTA) for 1 hour at room temperature. Proteins were desalted using a ZEBA column and subsequently treated with a 10-fold molar excess of N-ethylmaleimide (NEM) to cap free sulfhydryl groups created from DTT treatment. Free NEM was removed by either ZEBA column or dialysis against PBS.
Generation of b-hSOD1 Point Mutants
Site-directed mutagenesis was performed using the Quick-Change II Site-Directed Mutagenesis kit (Stratagene) as described by the manufacturer. Briefly, overlapping primers containing the desired point mutations were used to amplify full-length hSOD1 genes from the codon-optimized hSOD1 gene cloned into either pET32-a-myc or pGEX-4T-3. The amplified DNA was digested with DpnI to remove the template DNA, transformed into bacteria, and screened for the intended mutation by sequencing. All constructed mutant hSOD1 sequences were sequenced by standard DNA sequencing technology to ensure the fidelity of the PCR reactions. Constructs encoding the A4V, G93A and G85R hSOD1 mutations were synthesized. All mutant proteins were expressed and purified as described above.
Generation of b-hSOD1 Truncations
Fusion proteins were engineered with N-terminal thioredoxin fusion for bacterial expression in order to allow production of small portions of b-hSOD1.
The portion of b-hSOD1 protein encoding the desired amino acids was PCR amplified using pET32-a-myc as template and cloned into a new pET32-a-myc expression vector with BamHI and SalI in frame with the C-terminal myc and 6 histidine tags and N-terminal thioredoxin domain. The vector was then sequenced to confirm that the construct was correct. All constructs are shown as a schematic in FIG. 39 and they include:

    
    
        b-hSOD1-A (amino acids 1 to 38), SEQ ID NO: 320
        b-hSOD1-B (amino acids 1 to 77), SEQ ID NO: 321
        b-hSOD1-C (amino acids 1 to 116), SEQ ID NO: 322
        b-hSOD1-D (amino acids 39 to 153), SEQ ID NO: 323
        b-hSOD1-E (amino acids 78 to 153), SEQ ID NO: 324
        b-hSOD1-F (amino acids 117 to 153), SEQ ID NO: 325
        b-hSOD1-G (amino acids 39 to 77), SEQ ID NO: 326
        b-hSOD1-H (amino acids 78 to 116), SEQ ID NO: 327
        b-hSOD1-I (amino acids 39 to 116), SEQ ID NO: 328
        b-hSOD1-J (amino acids 92 to 153), SEQ ID NO: 329
        b-hSOD1-K (amino acids 102 to 153), SEQ ID NO: 330
    
    


The vectors were transformed into BL21-DE3 E. coli bacteria (Invitrogen) and expression was induced with IPTG. Bacteria were lysed and the proteins of interest were purified with nickel affinity chromatography. Protein concentration was determined based on OD 280 nm and further evaluated by Coomassie stained SDS-PAGE and Western blot using mouse antibody specific for myc and histidine tags. Bacterially-produced hSOD1 is referred to as b-hSOD1.
ELISA
ELISA was carried out with the b-hSOD1, E-hSOD1, b-hSOD1 truncations, b-hSOD1 mutants, and oxidized/reduced forms of SOD1 to determine antibody reactivity. Briefly, 96-well plates were coated with the desired protein and hybridoma supernatant or purified antibody was added to the 96 well plates to determine protein reactivity. Bound antibody was detected with anti-human alkaline phosphatase secondary antibody and PNPP substrate.
Affinity Determination
Affinity of antibodies was determined using an Octet QK (ForteBio) biomolecular interaction instrument. The Octet QK performs similarly to Biacore in the measurement of antibody affinity. The Octet QK uses biosensors to assess mass increases/decreases and determine rates of association and disassociation. A biosensor coated with amine-reactive chemistry was introduced into a solution containing E-hSOD1 or b-hSOD1 to covalently link these proteins to the surface of the biosensor. Unbound hSOD1 was washed away and the coated biosensor was introduced into a solution containing anti-SOD1 monoclonal antibodies at which time Kon was determined. The sensor was then introduced into a buffer solution containing no antibody and the Koff determined. Using Kon and Koff an affinity (KD) was calculated.
Antibody Competition
Competition of human monoclonal antibodies for hSOD1 binding was assessed using the Octet QK instrument. Briefly, anti-hSOD1 human monoclonal antibody #1 was captured on anti-human IgG biosensors followed by the addition of b-hSOD1 to facilitate antigen capture. The complex was subsequently re-incubated with antibody #1 to saturate all binding sites on the dimeric hSOD1 protein. Finally, human monoclonal antibody #2 was incubated with the biosensor to determine the ability of both antibodies to interact with hSOD1 simultaneously. If the Octet QK detected a mass increase upon addition of antibody #2 the antibodies were determined to not be competitive. If no mass increase was detected on the biosensor the antibodies were considered to compete.
Immunoprecipitation
HEK-293T cells were transfected with b-hSOD1 or b-hSOD1 containing various mutations using Lipofectamine 2000 (Invitrogen). All transfected constructs encoded a C-terminal myc epitope tag for easy detection of transfected proteins. The myc tag also allowed the discrimination of transfected hSDO1 from hSOD1 expressed in HEK-293T cells. 48 hours post-transfection, cells were lysed with Triton X-100 and insoluble debris removed by centrifugation. Cleared lysate was incubated with various anti-hSOD1 monoclonal antibodies in conjunction with protein A sepharose. Precipitated proteins were resolved by SDS-PAGE, transferred to a solid support and detected using either rabbit anti-hSOD1 or mouse anti-myc tag.
Cell Staining
HEK-293T cells in chamber slides were transfected with b-hSOD1 or b-hSOD1 containing various mutations using Lipofectamine 2000 (Invitrogen). 120 hours post-transfection cells were fixed in 2% formaldehyde and incubated with human anti-hSOD1 monoclonal antibodies in the presence of Triton X-100 (permeabilization). Slides were washed and incubated with anti-human secondary antibody conjugated to Alexa-488 as well as DAPI for staining nuclei. Slides were observed with a fluorescence microscope and photographs were taken.
Mouse Immunizations
Mice transgenic for human IgG genes (HuMab mice, Medarex, Inc.) were immunized with E-hSOD1, b-hSOD1, mutant versions of b-hSOD1 or oxidized/reduced hSOD1. All mice were immunized intraperitoneally weekly with 50 μg of hSOD1 protein in the Sigma adjuvant system (Sigma) for 6-16 weeks. Mouse serum was monitored by ELISA using the immunizing protein to determine the appropriate time for splenic fusion.
Splenic Fusions and Hybridoma Selection
Mouse spleens were removed and spleen cells were isolated. Spleen cells were fused to mouse myeloma cells (P3X-AG8.653) following a standard PEG fusion protocol to generate hybridomas. Hybridoma supernatants were then screened for production of antibody reactive to hSOD1 by ELISA and positive cell cultures were expanded for further characterization.
Isolation and Sequencing of Hybridoma Antibody Genes
RNA was isolated from hybridoma cells using a Qiagen RNeasy kit as described by the manufacturer. RT-PCR was performed for the heavy chain variable region with gene-specific primers containing restrictions sites, the resulting sequence was cloned and the construct was sequenced. Rapid Amplification of mRNA Ends by PCR(RACE) was performed for the light chain variable region with gene-specific primers. The sequence was cloned into the pCR4-TOPO vector (Invitrogen) and the inserted element was sequenced. Gene specific primers were designed and used to PCR-amplify sequences from pCR4-TOPO and add restriction sites for subsequent cloning into expression vectors.
Example 1
Generation of Anti-hSOD1 Monoclonal Antibodies
Forty eight transgenic mice comprising human immunoglobulin genes generated as described above were immunized with E-hSOD1, b-hSOD1, mutant versions of b-hSOD1 or oxidized/reduced hSOD1. Various mouse strains were also used that contain different transgenes and thus may produce a wide variety of antigen responses. The antigen was administered in combination with the Sigma adjuvant system. Mouse sera responses were monitored by enzyme linked immunosorbent assay (ELISA) to b-hSOD1. Seventeen mice were determined to have strong immune responses to the relevant antigen and splenic B cells were isolated from these immunized animals and fused to mouse myeloma (P3X-AG8.653) cells using standard spleen cell fusion methods. Clonal hybridomas were generated and screened using ELISA for production of antibody reactive to b-hSOD1. This method yielded 879 b-hSOD1-reactive hybridomas that were selected for further characterization.
Example 2
Antibody Heavy Chain Sequence Determination
RNA was extracted from the 879 positive hybridomas and nucleotide sequence of the heavy chain of the reactive antibody determined. RNA was purified from all hybridomas and RT-PCR performed using a reverse oligonucleotide complimentary to the heavy chain constant region and a forward oligonucleotide cocktail designed to anneal to all human heavy chain genes expressed in the mouse. PCR products were sequenced and 60 antibodies were considered to have a unique heavy chain sequence and were further characterized.
Example 3
Antibody Epitope Mapping and Lead-Candidate Selection
To determine which region of the hSOD1 protein the 60 human antibodies recognize, carboxy- and amino-terminal truncations of b-hSOD1 were captured in ELISA and probed with the 60 lead-candidate antibodies (see FIG. 39 for map of constructs). In the ELISA, 11 antibodies were able to recognize truncated versions of the hSOD1 suggesting these antibodies recognized a linear epitope and the group was further limited to 5 antibodies based on preliminary results showing unique recognition patterns. The recognition of these five antibodies is shown in FIG. 40. Antibodies 595-16, 311-3 and 591-37 were all shown to interact with the G truncation (amino acids 38-77). Antibody 358-11 clearly bound to the H truncation (amino acids 77-116) and 591-33 bound to the K truncation (amino acids 102-153). To further define the linear epitopes elucidated in the initial experiment, a series of peptides were designed and synthesized (FIG. 41) and ELISA was performed once again. Antibodies that recognized the G truncation, 595-16, 311-3 and 591-37, clearly bound to a different group of peptides demonstrating that the epitopes were amino acids 40-47, 42-49 and 63-71, respectively (FIG. 42). The epitope for antibody 358-11 was further defined and the minimal epitope was shown to be amino acids 80-88 (FIG. 43). Finally, the epitope for 591-33 was shown to be located within amino acids 107-121 (FIG. 44). FIG. 45 represents the amino acid sequence of hSOD1 with the five unique epitopes determined by the ELISA defined by a box.
The 49 antibodies that did not recognize truncated hSOD1 proteins were suspected to be dependent on conformational determinants within hSOD1. To determine if the antibodies recognized unique conformational epitopes, 29 of the 49 antibodies were used in competition experiments to further select unique antibodies. Antibodies were tested using an Octet QK to assess the capacity of antibodies to bind to b-hSOD1 concurrently. Results of the competition analysis are represented in FIGS. 46A-46B. FIG. 46A represents antibody #1 bound first and then antibody #2 binding assessed and FIG. 46B represents the opposite order. As a result of the competition analysis, seven distinct patterns were observed (FIG. 47) and 8 lead-candidate conformation-dependant antibodies were selected for further characterization (597-120, 312-19, 114-41, 306-155, 358-22, 303-8, 312-56 and 14-173).
Example 4
Antibody Characterization
Thirteen lead-candidate antibodies were selected for characterization using multiple methods. These lead antibodies and the details regarding their isolation can be found in Table 3. Eight of the antibodies recognized determinants that were dependant on the three dimensional structure of hSOD1 whereas five interacted with a continuous linear epitope.












TABLE 3








# of
Second
# of


Anti-
Mouse
First 
immu-
immu-
immu-


body 
number
immunogen
nizations
nogen
nizations




















595-16 
181595
GST-b-hSOD1
7
—
—


591-37 
181591
Trx-bhSOD1-
14
—
—




A4V





358-11 
180358
GST-b-hSOD1
13
—
—


358-22 
180358
GST-b-hSOD1
13
—
—


597-120
181597
GST-b-hSOD1
7
—
—


311-3 
176311
E-hSOD1 red
12
GST-bhSOD1
8


312-19 
176312
E-hSOD1 red
12
GST-bhSOD1
8


591-33 
181591 
Trx-b-hSOD1-
14
—
—




A4V





114-41 
189114 
GST-b-hSOD1-
9
—
—




A4V





306-155 
176306
E-hSOD1
14
—
—


 14-173
188014
GST-b-hSOD1 
6
—
—




red





303-8 
176303
E-hSOD1
13
—
—


312-56 
176312
E-hSOD1 red
12
GST-bhSOD1
8









ELISA

To determine reactivity of the lead-candidate antibodies with various forms of SOD1, ELISA was employed. b-hSOD1, b-hSOD1-A4V, b-hSOD1-G85R and b-hSOD1-G93A were expressed and purified from E. coli. Also, b-hSOD1 was either reduced with DTT or oxidized with hydrogen peroxide to produce monomerized and damaged b-hSOD1 respectively. ELISA plates were coated with b-hSOD1, mutants of b-hSOD1, oxidized/reduced b-hSOD1 or E-hSOD1. Plates were washed and a series of dilutions of each of the 13 antibodies was applied to each of the various hSOD1 proteins. Antibody binding was detected with a goat anti-human alkaline phosphatase secondary antibody and the interaction developed with PNPP. Plates were read using a Molecular Devices Emax plate reader and results are shown in FIG. 48A-M. Antibodies demonstrated various patterns of recognition in ELISA on these proteins.
Immunoprecipitation
To determine if the thirteen human anti-hSOD1 antibodies could interact with mammalian-expressed hSOD1, immunoprecipitations were performed. The mammalian expression vector pCMV-myc containing the gene encoding hSOD1 (Wild type, WT), hSOD1-G93A, hSOD1-G85R, hSOD1-A4V or empty vector (pcDNA) were transfected into the human HEK-293T cells to induce protein expression. Forty-eight hours following transfection, cells were lysed and protein precipitated with the 13 antibodies for each of the five transfectants. Precipitated protein was resolved by SDS-PAGE, transferred to a solid support and proteins detected in Western blot with either mouse anti-myc tag or a rabbit polyclonal anti-hSOD1 preparation. As a control for protein expression, crude lysate was resolved and Western blot performed (FIG. 49A). In the figure, the top blots represent detection with anti-myc antibody and the bottom blot is detected with rabbit anti-hSOD1. All proteins expressed well and no transfected hSOD1 (myc-tagged) was detected in cells transfected with empty vector. Also, lysates were either mock precipitated only excluding the human antibody from the procedure or precipitated with an irrelevant human antibody and the results are shown in FIG. 49B and FIG. 49C, respectively. Endogenous and transfected, myc-tagged hSOD1 could not be seen in any samples for either of these negative controls but some high molecular weight background (HMW) was observed.
The human antibodies were used to precipitate the various hSOD1 proteins and the Western blots are shown in FIG. 49D-P. All thirteen antibodies could precipitate mutant forms of hSOD1. Detection with the anti-myc antibody consistently gave weaker results than the rabbit anti-hSOD1 but the results for each were consistent. Interestingly, the antibodies that recognize linear epitopes, 595-16 (FIG. 49D), 591-37 (FIG. 49E), 358-11 (FIG. 49F), 311-3 (FIG. 49I), and 591-33 (FIG. 49K) could only precipitate mutant forms of the protein. No detection of wild-type hSOD1 was observed in any of the blots. Also of interest, 358-11 was not able to precipitate the hSOD1-G85R mutant presumably since the mutation occurs in the epitope recognized by the antibody (amino acids 80-88). However, all conformation dependent antibodies were able to precipitate both mutant and wild-type hSOD1. It is also clear that all conformation dependent antibodies can precipitate wild-type SOD1 present in HEK-293T cells which can be distinguished from the transfected hSOD1 due to the smaller apparent molecular weight. In addition, HEK-293T hSOD1 can only be seen in the blots probed with the rabbit anti-hSOD1 since the native protein does not contain the myc epitope tag.
This experiment was repeated using mouse neuroblastoma cells (MNA) rather than the human HEK-293T cells. All precipitations and controls were as described above and the goal of this test was to determine if any of the antibodies could precipitate mouse SOD1. Interestingly, only the conformation dependant antibodies 358-22 and 14-173 were able to precipitate mouse SOD1 (FIG. 50).
Cell Staining
HEK-293T cells were transiently transfected with hSOD1-G93A. After 120 hours cells were stained with the lead-candidate human monoclonal antibodies. Cells were observed using fluorescence microscopy and photographs taken (FIG. 51). All antibodies were able to stain hSOD1 in the cells. However, it is unclear if the antibodies stain the mutant hSOD1-G93A or the native hSOD1 expressed in HEK-293T cells. Of note, only the antibodies that recognized linear epitopes, 591-33, 595-16, 311-3, 591-37, and 358-11, were able to detect granules of hSOD1 within the cell. These results suggest that the antibodies binding linear epitopes recognize aggregated forms of the hSOD1 protein. The summary of the immunoprecipitation and cell staining results are shown in Table 4. Antibodies that demonstrated aggregate staining in HEK-293T cells were also the antibodies that only recognized mutant forms of hSOD1 in the immunoprecipitation assay.









TABLE 4







IF staining of



IP from 293T
aggregates in


Antibody
cells
293T cells







595-16 
only mutants
+


591-37 
only mutants
+


358-11 
only mutants
+


358-22 
all
−


597-120
all
−


311-3 
only mutants
+


312-19 
all
−


591-33 
only mutants
+


114-41 
all
−


306-155
all
−


 14-173
all
−









hSOD1 Mouse Tissue Staining

To determine if human anti-SOD1 monoclonal antibodies could interact with hSOD1 expressed in a mouse model of ALS, animals expressing either hSOD1 or hSOD1-G93A mutant were perfused with 4% paraformaldehyde for tissue fixation. Two sections of mouse lumbar spinal cord were dissected from mice at either 90 or 139 days of age and sections were incubated with human anti-hSOD1 monoclonal antibodies. The ventral horn region of the tissue sections were observed by fluorescence microscopy and photographs were taken using either 50 or 150 millisecond exposure times (FIG. 52). A negative control mAb did not demonstrate staining of any tissues. All anti-hSOD1 human monoclonal antibodies demonstrated staining of hSOD1 (wildtype or G93A mutant) albeit with varying degrees of intensity. A proportion of the antibodies were able to interact with hSOD1 present in the central canal area of the sections presenting as a ring around the central canal. The summarized results of all staining experiments is shown in Table 5.











TABLE 5









G93A-




G93A-
Central
hSOD1


Antibody 
hSOD1
hSOD1
canal
aggregate







595-16 
+
++
+
++


591-37 
+
+
−
+++


358-22 
+
++
+
+


597-120
+++
+++
+
+


311-3 
+
+
−
++


312-19 
+
+
+
++


591-33 
+
++
−
++


114-41 
+++
+
++
+++


306-155
++
++++
+
++


 14-173
+++
+
+++
+++









Affinity Analysis

Affinity analysis was performed on all 13 lead-candidate anti-hSOD1 human monoclonal antibodies. Affinity was determined using an Octet QK instrument on both E-hSOD1 and b-hSOD1 (Table 6).









TABLE 6





Antibody
KD (nM) for E-hSOD1
KD (nM) for b-hSOD1

















595-16 
None
5.6


591-37 
None
2.1


358-11 
None
5.5


358-22 
1.1
4.1


597-120
1.0
2.0


311-3 
None
6.7


312-19 
0.2
1.3


591-33 
None
5.0


114-41 
6.5
5.6


306-155 
2.2
7.3


 14-173
3.5
19.0


303-8 
8.8
1.2


312-56 
6.8
5.2









E-hSOD1 was purified from human erythrocytes and represents fully metallated, native conformation hSOD1. The b-hSOD1 was expressed and purified recombinantly from E. coli. b-hSOD1 has been shown to lack a full complement of metal and is expected to be misfolded to some extent. Affinity was measured and all antibodies demonstrated strong affinity for b-hSOD1. 358-22, 597-120, 312-19, 114-41, 306-155, 14-173, 303-8 and 312-56 all bound E-hSOD1 with high affinity. However, the antibodies that recognized a linear epitope in hSOD1 (591-33, 595-16, 311-3, 591-37 and 358-11) showed no apparent binding to E-hSOD1. These results are in full agreement with the immunoprecipitation results suggesting that the five antibodies that recognize a linear determinant in hSOD1 do not recognize properly folded, wild-type hSOD1.
Competition
To determine if the antibodies interacting with linear determinants within hSOD1 could compete with the antibodies recognizing conformation-dependant determinant, a full competition analysis for b-hSOD1 was performed using the Octet QK and the results are shown in FIG. 53. As expected, all antibodies compete with themselves for binding to b-hSOD1. All antibodies with linear epitopes were unable to compete with each other, with the exception of 311-3 and 595-16 which have overlapping linear epitopes. Interestingly, all linear antibodies competed with essentially all conformation-dependant antibodies. The one unique binding profile with regards to the linear/conformational competition was antibody 114-41. This antibody competed with all linear-reactive antibodies when it was allowed to bind to b-hSOD1 as the primary antibody. However, when 591-33 or 591-37 was bound first to b-hSOD1, 114-41 was still able to bind so the competition between this group of mAbs can be considered unidirectional. 114-41 demonstrated this same unidirectional competition when tested against the conformation-dependant antibody 14-173 (FIG. 47).
Example 5
In vivo Activity of Antibodies in the Human Mutant (G93A) SOD1 Transgenic Mice with ALS-Like Phenotype
Anti-SOD1 antibodies of the present invention were dosed intrathecally into transgenic mice expressing mutant human SOD1 and having an ALS-like phenotype. Transgenic B6SJL-Tg(SOD1G93A)1Gur/J strain (expressing the G93A human SOD1 mutant) mice were obtained from Jackson Laboratories. Mice at approximately 65 days of age were surgically implanted with a lumbar intrathecal catheter into the spinal subarachnoid space. The catheter was connected to an Alzet pump channeled under the skin of the back. The Alzet pump is a miniature osmotic pump that relies on physiological tonicity to cause the inflation of an osmotic reservoir which gradually compresses an internal impermeable reservoir containing the antibody which is thus expelled through a flow regulator during the course of the experiment. Each antibody dosed in the mouse model was prepared at approximately 10 mg/mL. The Alzet model 2006 used in this study has a nominal reservoir volume of 200 μl and delivers a nominal 0.15 μl/hr over a course of approximately 6 weeks.
Pumps were implanted at around day 65 of life as this was the youngest age at which the procedure and implantation can be reasonably executed. To avoid any adverse impact on the pump system, the animals were not physically challenged in standardized tests and the primary measurement of function in the assay was weight gain and/or weight maintenance until pump removal. The pumps were removed at day 115 of life and the animals were observed for progression of the ALS phenotype. After the removal of the pumps and the termination of dosing, the primary measurement in the assay was gross motor capability/survival. Animals surviving the progression of the disease phenotype to the stage of complete bilateral hind limb paralysis were euthanized.
Control animals received dosing of an unrelated isotypic monoclonal antibody in the same formulation and, after normalizing for starting weight, manifested weight plateau at around 90 days of life, consistent with this strain. This was followed by marked weight loss with the average weight of animals falling past the starting weight at around Day 104. Animals began to reach the assay endpoint by day 118 and the average day of death was 120.5 days (n=10) (see Table 7).
In our preliminary experiments, of the six antibodies of the present invention studied in this mouse model to date, five (597-120, 591-37, 591-33, 358-22 and 358-11) showed a higher and/or later weight plateau than the control group after normalizing for starting weights (FIGS. 54A-C). Antibody 595-16 showed a plateau that was similar in terms of timing and weight gain over starting weight to that seen in the control cohort.
All six antibodies (597-120, 595-16, 591-37, 591-33, 358-22 and 358-11) studied in the preliminary studies using the mouse model maintained weight better than the control cohort as judged by the day the average weight of the cohort fell below the starting weights. This general extension of healthy function is most clearly demonstrated by the average extension in life for each cohort dosed with antibody of the present invention (n=4 for each cohort except 597-120 where n=6) over the control cohort, which ranged from a 5.8 day extension over control for antibody 358-11, 7.3 days for 358-22, 8.8 days for 591-33, 10.5 days for 595-16, 6.7 days for 597-120 and 12.8 days extension of life over the control cohort for antibody 591-37 (see Table 7).












TABLE 7










difference




days of

from



treatment
survival
average
control





















358-11 
118
126.3
4.5



358-11 
121





358-11 
127





358-11 
139





358-22 
127
127.8
6.0



358-22 
127





358-22 
127





358-22 
130





591-33 
118
129.3
7.5



591-33 
130





591-33 
133





591-33 
136





591-37 
121
133.3
11.5



591-37 
130





591-37 
136





591-37 
146





595-16 
118
131.0
9.2



595-16 
120





595-16 
136





595-16 
150





597-120
118
133.2
11.4



597-120
128





597-120
130





597-120
140





597-120
150





114-41 
125
121.3
−0.5



114-41 
121





114-41 
118





306-155
111
117.5
−4.3



306-155
124





311-3 
118
124.5
2.7



311-3 
121





311-3 
128





311-3 
131





312-19 
115
129.3
7.5



312-19 
127





312-19 
137





312-19 
138





control
111
121.8
N/A



control
115





control
117





control
118





control
132





control
132





control
112





control
124





control
124





control
133












In these preliminary mouse experiments, animals receiving antibodies of the present invention showed a therapeutic benefit manifested as significant improvements in general health evidenced by gain and maintenance of body weight, and the maintenance of gross motor function, as assessed by the date of attainment of bilateral hind-limb paralysis, with respect to controls similarly dosed with an irrelevant antibody of the same isotype.
The mouse models described above are used to dose the antibodies using intraperitoneal (IP) dosing and are predicted to delay onset of symptoms and extend life compared to controls receiving an unrelated antibody. The use of IP delivery allows for dosing animals earlier in life, more frequently, and with larger doses of antibody.
Example 6
Complete Antibody Sequencing and Cloning
The heavy chain sequence for all antibodies was determined during the screening process for selection of the lead-candidate antibodies. Using PCR, a Kozak sequence (5′ end) and the appropriate restriction sites (5′ and 3′ end) were engineered into the sequence for subsequent cloning into expression vectors. For light chain sequencing, Rapid Amplification of mRNA Ends by PCR (RACE) was performed to determine variable region sequence. The sequence was cloned into the pCR4-TOPO vector (Invitrogen) and the inserted element was sequenced. Gene specific primers were designed and used to PCR-amplify sequences from pCR4-TOPO and add restriction sites and a Kozak sequence for subsequent cloning into expression vectors. Expression vectors for the heavy and light chain genes were combined into one final expression vector construct. Also, in some instances the heavy chain and light chain leader region was replaced with an osteonectin leader (SEQ ID NO: 350) to enhance expression of the antibodies.
Example 7
Antibody Mutagenesis to Optimize Properties
Many factors are considered possibly deleterious for antibodies. Divergence of the framework region sequence from that found in the germline gene may be ultimately immunogenic in the patient. Also, certain amino acids in the antibody may be prone to modifications including but not limited to glycosylation, oxidation, deamidation, hydrolysis, isomerization or disulfide bonding. These amino acid modifications can lead to heterogeneity of an antibody product which is not desirable. In addition, the DP44 antibody gene contains two amino acids (H13 and M87) that are not found in the human repertoire and may be considered immunogenic. An analysis of the lead candidate antibodies was performed to identify amino acids that could be considered problematic in a final product. Sequences for both heavy and light chains were altered to remove these undesirable amino acids and the new sequences were named M1.
Example 8
Production of Anti-hSOD1 Antibodies for Administration in Humans
Human antibodies of the present invention can be cloned and recombinantly expressed to facilitate or increase their production using known techniques.
Nucleic acid sequences encoding the variable heavy chain and light chains of the hSOD1-reactive antibodies were cloned into a pIE-Ugamma1F vector using standard recombinant DNA methodology. The vector was amplified in E. coli, purified, and transfected into CHO-DG44 cells. Transfected cells were plated at 4×105 cells per well in a 96-well dish and selected for vector transfection with G418. The expression of the antibodies was amplified by growth in the presence of increasing concentrations of methotrexate. A culture capable of growth in 175 nM methotrexate was chosen for cloning single cells for further development. Plating the culture in 96 well plates at low density allowed generation of cultures arising from a single cell or clones. The cultures were screened for production of human IgG, and the cell that produced the highest level of IgG was selected for further use. The methotrexate-amplified clone was expanded to produce a cell bank including multiple frozen vials of cells. Alternatively, glutamine synthetase (GS) vectors can be used with cell selection achieved using, e.g., methionine sulphoximine (see, e.g., U.S. Pat. Nos. 5,827,739; 5,122,464; 5,879,936; and 5,891,693).
To prepare antibodies from transfected cells, cells from a clone isolated in the previous steps are cultured and expanded as inoculum for a bioreactor. The bioreactor typically holds a 500 liter volume of culture medium. The cells are cultured in the bioreactor until cell viability drops, which indicates a maximal antibody concentration has been produced in the culture. The cells are removed by filtration. The filtrate is applied to a protein A column. Antibodies bind to the column, and are eluted with a low pH wash. Next, the antibodies are applied to a Q-sepharose column to remove residual contaminants, such as CHO cell proteins, DNA, and other contaminants (e.g., viral contaminants, if present). Antibodies are eluted from the Q-sepharose column, nano-filtered, concentrated, and washed in a buffer such as PBS. The preparation is then aseptically aliquoted into vials for administration.
Example 9
Interaction of Antibodies with SOD1 in Patients with sALS
Sporadic ALS or familial ALS not associated with SOD1 mutations may be due to misfolding of SOD1 caused by factors other than SOD1 mutations. In such cases, the antibodies of the present invention may be used to provide therapeutic benefit to patients suffering from SALS or FALS due to misfolded SOD1. To determine if antibodies directed against SOD1 differentially recognize SOD1 protein found in the CNS of SALS patients, sections of spinal cord are isolated from deceased SALS patients. Immunohistochemistry is used to determine if human anti-SOD1 monoclonal antibodies interact with SOD1 in these sections. Antibodies directed against linear epitopes of SOD1 only recognize mutant/misfolded forms of SOD1, and staining in SALS-derived spinal cord sections (excluding those cases where genotyping suggests that the SALS is associated with de novo or otherwise familiarly unknown SOD1 mutation) would suggest SOD1 was misfolded in these patients. The antibodies of the invention, or a subset thereof that binds to the misfolded SOD1 in patients may be used for therapeutic benefit in the patients suffering from SALS or FALS.
Example 10
In vitro Assays to Determine the Activity of Antibodies
One proposed mechanism is for the SOD1 effect on motor neuron loss is that SOD1 misfolds and aggregates causing direct toxicity to cells leading to motor neuron death. Antibodies inhibiting SOD1 aggregation could then provide therapeutic benefit. In vitro, aggregation can be measured by detecting exposure of hydrophobic surfaces on the SOD1 protein. Dyes such as 8-anilinonaphthalene sulfonate (ANS) bind to hydrophobic surfaces, gaining measurable alteration in fluorescence emission profiles. The ability of an antibody to block aggregation in vitro is demonstrated by reduction in ANS binding to misfolded SOD1 in the presence of an aggregation-inhibiting antibody.
SOD1 aggregation has been shown to activate immune cells such as microglia. This activation leads to microglia-induced destruction of neuronal cells in culture. When SOD1-G93A is either endogenously or exogenously applied to microglial cells cultured in the presence of motor neurons, motor neuron death is measured by apoptotic markers, as well as visible observation. In addition, microglial activation in this experiment can be measured by detection of increased levels of mRNA and/or proteins related to TNF-α, IFN-γ, and iNOS (nitric oxide synthase). Such assays may be used to further assess the antibodies of the invention for their ability to provide a therapeutic benefit and will better define the exact pathological mechanism(s) to be remediated.
It has also been shown that expression of SOD1-G93A protein in neuronal cells in culture leads to susceptibility to oxidative damage and cell death. Xanthine/xanthine oxidase is applied to SOD1-G93A expressing neuronal cells to deliver oxidative stress. The death induced by this stress is determined, for example, using a metabolic dye, such as Alamar blue. The addition of anti-SOD1 antibodies to the culture may inhibit the cell death or mitigate the cell stress associated with this oxidative insult. Such an assay may be used to assess the ability of the antibodies of the present invention to provide a therapeutic benefit, and to further define the pathological mechanism(s) underlying the ALS neurodegenerative phenotype.
Other Embodiments
The description of the specific embodiments of the invention is presented for the purposes of illustration. It is not intended to be exhaustive or to limit the scope of the invention to the specific forms described herein. Although the invention has been described with reference to several embodiments, it will be understood by one of ordinary skill in the art that various modifications can be made without departing from the spirit and the scope of the invention, as set forth in the claims. All patents, patent applications, and publications referenced herein are hereby incorporated by reference. Other embodiments are in the claims.
















Seq ID #
type
comments
FIGURES





















1
AA
595-16 VH
FIG. 1



2
NT
595-16 VH
FIG. 1



3
AA
595-16 VH CDR1
FIG. 1 + 3



4
NT
595-16 VH CDR1 
FIG. 1 + 3



5
AA
595-16 VH CDR2
FIG. 1 + 3



6
NT
595-16 VH CDR2 
FIG. 1 + 3



7
AA
595-16 VH CDR3 
FIG. 1 + 3



8
NT
595-16 VH CDR3 
FIG. 1 + 3



9
AA
595-16 VK
FIG. 2



10
NT
595-16 VK
FIG. 2



11
AA
595-16 VK CDR1
FIG. 2



12
NT
595-16 VK CDR1 
FIG. 2



13
AA
595-16 VK CDR2 
FIG. 2



14
NT
595-16 VK CDR2
FIG. 2



15
AA
595-16 VK CDR3 
FIG. 2



16
NT
595-16 VK CDR3
FIG. 2



17
AA
595-16-M1 VH
FIG. 3



18
NT
595-16-M1 VH
FIG. 3



19
AA
591-37 VH
FIG. 4



20
NT
591-37 VH
FIG. 4



21
AA
591-37 VH CDR1 
FIG. 4 + 6



22
NT
591-37 VH CDR1
FIG. 4 + 6



23
AA
591-37 VH CDR2 
FIG. 4 + 6



24
NT
591-37 VH CDR2
FIG. 4 + 6



25
AA
591-37 VH CDR3 
FIG. 4 + 6



26
NT
591-37 VH CDR3 
FIG. 4 + 6



27
AA
591-37 VK
FIG. 5



28
NT
591-37 VK
FIG. 5



29
AA
591-37 VK CDR1 
FIG. 5



30
NT
591-37 VK CDR1 
FIG. 5



31
AA
591-37 VK CDR2 
FIG. 5



32
NT
591-37 VK CDR2 
FIG. 5



33
AA
591-37 VK CDR3
FIG. 5



34
NT
591-37 VK CDR3 
FIG. 5



35
AA
591-37-M1 VH
FIG. 6



36
NT
591-37-M1 VH
FIG. 6



37
AA
358-11 VH
FIG. 7



38
NT
358-11 VH
FIG. 7



39
AA
358-11 VH CDR1
FIG. 7 + 9



40
NT
358-11 VH CDR1
FIG. 7 + 9



41
AA
358-11 VH CDR2 
FIG. 7 + 9



42
NT
358-11 VH CDR2
FIG. 7 + 9



43
AA
358-11 VH CDR3
FIG. 7 + 9



44
NT
358-11 VH CDR3 
FIG. 7 + 9



45
AA
358-11 VK
FIG. 8



46
NT
358-11 VK
FIG. 8



47
AA
358-11 VK CDR1
FIG. 8



48
NT
358-11 VK CDR1
FIG. 8



49
AA
358-11 VK CDR2
FIG. 8



50
NT
358-11 VK CDR2
FIG. 8



51
AA
358-11 VK CDR3
FIG. 8



52
NT
358-11 VK CDR3
FIG. 8



53
AA
358-11-M1 VH
FIG. 9



54
NT
358-11-M1 VH
FIG. 9



55
AA
358-22 VH
FIG. 10



56
NT
358-22 VH
FIG. 10



57
AA
358-22 VH CDR1 
FIG. 10 + 12



58
NT
358-22 VH CDR1
FIG. 10 + 12



59
AA
358-22 VH CDR2
FIG. 10 + 12



60
NT
358-22 VH CDR2 
FIG. 10 + 12



61
AA
358-22 VH CDR3
FIG. 10 + 12



62
NT
358-22 VH CDR3
FIG. 10 + 12



63
AA
358-22 VK
FIG. 11



64
NT
358-22 VK
FIG. 11



65
AA
358-22 VK CDR1
FIG. 11



66
NT
358-22 VK CDR1
FIG. 11



67
AA
358-22 VK CDR2
FIG. 11



68
NT
358-22 VK CDR2
FIG. 11



69
AA
358-22 VK CDR3
FIG. 11



70
NT
358-22 VK CDR3
FIG. 11



71
AA
358-22-M1 VH
FIG. 12



72
NT
358-22-M1 VH
FIG. 12



73
AA
597-120 VH
FIG. 13



74
NT
597-120 VH
FIG. 13



75
AA
597-120 VH CDR1
FIG. 13 + 15



76
NT
597-120 VH CDR1
FIG. 13 + 15



77
AA
597-120 VH CDR2
FIG. 13 + 15



78
NT
597-120 VH CDR2
FIG. 13 + 15



79
AA
597-120 VH CDR3
FIG. 13 + 15



80
NT
597-120 VH CDR3
FIG. 13 + 15



81
AA
597-120 VK
FIG. 14



82
NT
597-120 VK
FIG. 14



83
AA
597-120 VK CDR1 
FIG. 14



84
NT
597-120 VK CDR1
FIG. 14



85
AA
597-120 VK CDR2
FIG. 14



86
NT
597-120 VK CDR2
FIG. 14



87
AA
597-120 VK CDR3
FIG. 14



88
NT
597-120 VK CDR3 
FIG. 14



89
AA
597-120-M1 VH
FIG. 15



90
NT
597-120-M1 VH
FIG. 15



91
AA
311-3 VH
FIG. 16



92
NT
311-3 VH
FIG. 16



93
AA
311-3 VH CDR1
FIG. 16 + 18



94
NT
311-3 VH CDR1
FIG. 16 + 18



95
AA
311-3 VH CDR2
FIG. 16 + 18



96
NT
311-3 VH CDR2
FIG. 16 + 18



97
AA
311-3 VH CDR3
FIG. 16 + 18



98
NT
311-3 VH CDR3
FIG. 16 + 18



99
AA
311-3 VK
FIG. 17



100
NT
311-3 VK
FIG. 17



101
AA
311-3 VK CDR1
FIG. 17 + 19



102
NT
311-3 VK CDR1
FIG. 17 + 19



103
AA
311-3 VK CDR2
FIG. 17



104
NT
311-3 VK CDR2
FIG. 17



105
AA
311-3 VK CDR3
FIG. 17 + 19



106
NT
311-3 VK CDR3
FIG. 17 + 19



107
AA
311-3-M1 VH
FIG. 18



108
NT
311-3-M1 VH
FIG. 18



109
AA
311-3-M1 VK
FIG. 19



110
NT
311-3-M1 VK
FIG. 19



111
AA
311-3-M1 VK CDR2 
FIG. 19



112
NT
311-3-M1 VK CDR2
FIG. 19



113
AA
312-19 VH
FIG. 20



114
NT
312-19 VH
FIG. 20



115
AA
312-19 VH CDR1
FIG. 20 + 22



116
NT
312-19 VH CDR1
FIG. 20 + 22



117
AA
312-19 VH CDR2
FIG. 20 + 22



118
NT
312-19 VH CDR2 
FIG. 20 + 22



119
AA
312-19 VH CDR3
FIG. 20 + 22



120
NT
312-19 VH CDR3
FIG. 20 + 22



121
AA
312-19 VK
FIG. 21



122
NT
312-19 VK
FIG. 21



123
AA
312-19 VK CDR1
FIG. 21



124
NT
312-19 VK CDR1
FIG. 21



125
AA
312-19 VK CDR2
FIG. 21



126
NT
312-19 VK CDR2
FIG. 21



127
AA
312-19 VK CDR3
FIG. 21



128
NT
312-19 VK CDR3
FIG. 21



129
AA
312-19-M1 VH
FIG. 22



130
NT
312-19-M1 VH
FIG. 22



131
AA
591-33 VH
FIG. 23



132
NT
591-33 VH
FIG. 23



133
AA
591-33 VH CDR1
FIG. 23 + 25



134
NT
591-33 VH CDR1
FIG. 23 + 25



135
AA
591-33 VH CDR2
FIG. 23 + 25



136
NT
591-33 VH CDR2 
FIG. 23 + 25



137
AA
591-33 VH CDR3
FIG. 23 + 25



138
NT
591-33 VH CDR3
FIG. 23 + 25



139
AA
591-33 VK
FIG. 24



140
NT
591-33 VK
FIG. 24



141
AA
591-33 VK CDR1
FIG. 24



142
NT
591-33 VK CDR1
FIG. 24



143
AA
591-33 VK CDR2
FIG. 24



144
NT
591-33 VK CDR2
FIG. 24



145
AA
591-33 VK CDR3
FIG. 24



146
NT
591-33 VK CDR3
FIG. 24



147
AA
591-33-M1 VH
FIG. 25



148
NT
591-33-M1 VH
FIG. 25



149
AA
114-41 VH
FIG. 26



150
NT
114-41 VH
FIG. 26



151
AA
114-41 VH CDR1
FIG. 26 + 28



152
NT
114-41 VH CDR1
FIG. 26 + 28



153
AA
114-41 VH CDR2
FIG. 26 + 28



154
NT
114-41 VH CDR2
FIG. 26 + 28



155
AA
114-41 VH CDR3
FIG. 26 + 28



156
NT
114-41 VH CDR3 
FIG. 26 + 28



157
AA
114-41 VK
FIG. 27



158
NT
114-41 VK
FIG. 27



159
AA
114-41 VK CDR1
FIG. 27



160
NT
114-41 VK CDR1
FIG. 27



161
AA
114-41 VK CDR2
FIG. 27



162
NT
114-41 VK CDR2
FIG. 27



163
AA
114-41 VK CDR3
FIG. 27



164
NT
114-41 VK CDR3
FIG. 27



165
AA
114-41-M1 VH
FIG. 28



166
NT
114-41-M1 VH
FIG. 28



167
AA
306-155 VH
FIG. 29



168
NT
306-155 VH
FIG. 29



169
AA
306-155 VH CDR1
FIG. 29



170
NT
306-155 VH CDR1 
FIG. 29



171
AA
306-155 VH CDR2 
FIG. 29



172
NT
306-155 VH CDR2
FIG. 29



173
AA
306-155 VH CDR3
FIG. 29



174
NT
306-155 VH CDR3
FIG. 29



175
AA
306-155 VK
FIG. 30



176
NT
306-155 VK
FIG. 30



177
AA
306-155 VK CDR1
FIG. 30



178
NT
306-155 VK CDR1
FIG. 30



179
AA
306-155 VK CDR2 
FIG. 30



180
NT
306-155 VK CDR2
FIG. 30



181
AA
306-155 VK CDR3
FIG. 30



182
NT
306-155 VK CDR3
FIG. 30



183
AA
 14-173 VH
FIG. 31



184
NT
 14-173 VH
FIG. 31



185
AA
 14-173 VH CDR1
FIG. 31



186
NT
 14-173 VH CDR1
FIG. 31



187
AA
 14-173 VH CDR2
FIG. 31



188
NT
 14-173 VH CDR2
FIG. 31



189
AA
 14-173 VH CDR3
FIG. 31



190
NT
 14-173 VH CDR3
FIG. 31



191
AA
 14-173 VK
FIG. 32



192
NT
 14-173 VK
FIG. 32



193
AA
 14-173 VK CDR1
FIG. 32 + 33



194
NT
 14-173 VK CDR1 
FIG. 32 + 33



195
AA
 14-173 VK CDR2
FIG. 32 + 33



196
NT
 14-173 VK CDR2 
FIG. 32 + 33



197
AA
 14-173 VK CDR3
FIG. 32 + 33



198
NT
 14-173 VK CDR3
FIG. 32 + 33



199
AA
 14-173-M1 VK
FIG. 33



200
NT
 14-173-M1 VK
FIG. 33



201
AA
303-8 VH
FIG. 34



202
NT
303-8 VH
FIG. 34



203
AA
303-8 VH CDR1
FIG. 34



204
NT
303-8 VH CDR1
FIG. 34



205
AA
303-8 VH CDR2
FIG. 34



206
NT
303-8 VH CDR2
FIG. 34



207
AA
303-8 VH CDR3
FIG. 34



208
NT
303-8 VH CDR3
FIG. 34



209
AA
303-8 VK
FIG. 35



210
NT
303-8 VK
FIG. 35



211
AA
303-8 VK CDR1
FIG. 35



212
NT
303-8 VK CDR1
FIG. 35



213
AA
303-8 VK CDR2
FIG. 35



214
NT
303-8 VK CDR2
FIG. 35



215
AA
303-8 VK CDR3
FIG. 35



216
NT
303-8 VK CDR3
FIG. 35



217
AA
312-56 VH
FIG. 36



218
NT
312-56 VH
FIG. 36



219
AA
312-56 VH CDR1
FIG. 36



220
NT
312-56 VH CDR1
FIG. 36



221
AA
312-56 VH CDR2
FIG. 36



222
NT
312-56 VH CDR2
FIG. 36



223
AA
312-56 VH CDR3
FIG. 36



224
NT
312-56 VH CDR3
FIG. 36



225
AA
312-56 VK
FIG. 37



226
NT
312-56 VK
FIG. 37



227
AA
312-56 VK CDR1
FIG. 37



228
NT
312-56 VK CDR1
FIG. 37



229
AA
312-56 VK CDR2
FIG. 37



230
NT
312-56 VK CDR2
FIG. 37



231
AA
312-56 VK CDR3
FIG. 37



232
NT
312-56 VK CDR3
FIG. 37



233
AA
595-16 VH with leader 
none



234
NT
595-16 VH with leader 
none



235
AA
595-16 VK with leader 
none



236
NT
595-16 VK with leader 
none



237
AA
595-16-M1 VH with leader
none



238
NT
595-16-M1 VH with leader
none



239
AA
591-37 VH with leader 
none



240
NT
591-37 VH with leader 
none



241
AA
591-37 VK with leader 
none



242
NT
591-37 VK with leader 
none



243
AA
591-37-M1 VH with leader
none



244
NT
591-37-M1 VH with leader
none



245
AA
358-11 VH with leader
none



246
NT
358-11 VH with leader
none



247
AA
358-11 VK with leader
none



248
NT
358-11 VK with leader
none



249
AA
358-11-M1 VH with leader 
none



250
NT
358-11-M1 VH with leader 
none



251
AA
358-22 VH with leader
none



252
NT
358-22 VH with leader
none



253
AA
358-22 VK with leader
none



254
NT
358-22 VK with leader
none



255
AA
358-22-M1 VH with leader 
none



256
NT
358-22-M1 VH with leader 
none



257
AA
597-120 VH with leader
none



258
NT
597-120 VH with leader
none



259
AA
597-120 VK with leader
none



260
NT
597-120 VK with leader
none



261
AA
597-120-M1 VH with leader
none



262
NT
597-120-M1 VH with leader
none



263
AA
311-3 VH with leader
none



264
NT
311-3 VH with leader
none



265
AA
311-3 VK with leader
none



266
NT
311-3 VK with leader
none



267
AA
311-3-M1 VH with leader 
none



268
NT
311-3-M1 VH with leader 
none



269
AA
311-3-M1 VK with leader 
none



270
NT
311-3-M1 VK with leader 
none



271
AA
312-19 VH with leader
none



272
NT
312-19 VH with leader
none



273
AA
312-19 VK with leader
none



274
NT
312-19 VK with leader
none



275
AA
312-19-M1 VH with leader 
none



276
NT
312-19-M1 VH with leader 
none



277
AA
591-33 VH with leader
none



278
NT
591-33 VH with leader
none



279
AA
591-33 VK with leader
none



280
NT
591-33 VK with leader
none



281
AA
591-33-M1 VH with leader 
none



282
NT
591-33-M1 VH with leader 
none



283
AA
114-41 VH with leader
none



284
NT
114-41 VH with leader
none



285
AA
114-41 VK with leader
none



286
NT
114-41 VK with leader
none



287
AA
114-41-M1 VH with leader 
none



288
NT
114-41-M1 VH with leader 
none



289
AA
306-155 VH with leader
none



290
NT
306-155 VH with leader
none



291
AA
306-155 VK with leader
none



292
NT
306-155 VK with leader 
none



293
AA
 14-173 VH with leader
none



294
NT
 14-173 VH with leader
none



295
AA
 14-173 VK with leader
none



296
NT
 14-173 VK with leader
none



297
AA
 14-173-M1 VK with leader
none



298
NT
 14-173-M1 VK with leader
none



299
AA
303-8 VH with leader
none



300
NT
303-8 VH with leader
none



301
AA
303-8 VK with leader
none



302
NT
303-8 VK with leader
none



303
AA
312-56 VH with leader
none



304
NT
312-56 VH with leader
none



305
AA
312-56 VK with leader
none



306
NT
312-56 VK with leader
none



307
AA
hSOD1 amino acids 40-47 
none



308
NT
hSOD1 amino acids 40-47 
none



309
AA
hSOD1 amino acids 63-71 
none



310
NT
hSOD1 amino acids 63-71 
none



311
AA
hSOD1 amino acids 80-88 
none



312
NT
hSOD1 amino acids 80-88 
none



313
AA
hSOD1 amino acids 42-49 
none



314
NT
hSOD1 amino acids 42-49 
none



315
AA
hSOD1 amino acids 107-121
none



316
NT
hSOD1 amino acids 107-121
none



317
AA
hSOD1
FIG. 39 + 45



318
NT
hSOD1
none



319
NT
hSOD1 codon-optimized
none



320
AA
b-hSOD1-A
FIG. 39



321
AA
b-hSOD1-B
FIG. 39



322
AA
b-hSOD1-C
FIG. 39



323
AA
b-hSOD1-D
FIG. 39



324
AA
b-hSOD1-E
FIG. 39



325
AA
b-hSOD1-F
FIG. 39



326
AA
b-hSOD1-G
FIG. 39



327
AA
b-hSOD1-H
FIG. 39



328
AA
b-hSOD1-I
FIG. 39



329
AA
b-hSOD1-J
FIG. 39



330
AA
b-hSOD1-K
FIG. 39



331
AA
hSOD1-G1
FIG. 41



332
AA
hSOD1-Gla
FIG. 41



333
AA
hSOD1-G1b
FIG. 41



334
AA
hSOD1-Glc
FIG. 41



335
AA
hSOD1-G2
FIG. 41



336
AA
hSOD1-G3
FIG. 41



337
AA
hSOD1-G4
FIG. 41



338
AA
hSOD1-G4a
FIG. 41



339
AA
hSOD1-G4b
FIG. 41



340
AA
hSOD1-G4c
FIG. 41



341
AA
hSOD1-H1
FIG. 41



342
AA
hSOD1-H1a
FIG. 41



343
AA
hSOD1-H1b
FIG. 41



344
AA
hSOD1-H1c
FIG. 41



345
AA
hSOD1-H2
FIG. 41



346
AA
hSOD1-H3
FIG. 41



347
AA
hSOD1-H4
FIG. 41



348
AA
hSOD1-K1
FIG. 41



349
AA
hSOD1-K2
FIG. 41



350
AA
osteonectin leader
none



351
NT
osteonectin leader
none



352
AA
DICLPRWGCLW
none


















Sequence listing - hSOD1 human antibodies



SEQ ID: 1



(595-16 VH)



EVQLVQSGGGLGHPGGSLRLSCAGSGFTFSSYSMHWLRQAPGKGLKWVSAIGTAGGTYYADSVKGRFTISRDNAKNS


 


FYLQMNSLRAEDMAVYYCAREYFFGSGNYGYWGQGTLVTASS


 


SEQ ID: 2



(595-16 VH)



GAGGTTCAGCTGGTGCAGTCTGGGGGAGGCTTGGGACATCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGG


 


ATTCACTTTCAGTAGTTATTCTATGCACTGGCTTCGCCAGGCTCCAGGAAAAGGTCTGAAGTGGGTATCAGCTATTG


 


GTACTGCTGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCC


 


TTCTATCTTCAAATGAACAGCCTGAGAGCCGAGGACATGGCTGTGTATTACTGTGCAAGAGAGTATTTCTTTGGTTC


 


GGGGAATTATGGATACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCA


 


SEQ ID: 3



(595-16 VH CDR1)



SYSMH


 


SEQ ID: 4



(595-16 VH CDR1)



AGTTATTCTATGCAC


 


SEQ ID: 5



(595-16 VH CDR2)



AIGTAGGTYYADSVKG


 


SEQ ID: 6



(595-16 VH CDR2)



GCTATTGGTACTGCTGGTGGCACATACTATGCAGACTCCGTGAAGGGC


 


SEQ ID: 7



(595-16 VH CDR3)



EYFFGSGNYGY


 


SEQ ID: 8



(595-16 VH CDR3)



GAGTATTTCTTTGGTTCGGGGAATTATGGATAC


 


SEQ ID: 9



(595-16 VK)



EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISS


 


LEPEDFAVYYCQQRSNWPPTFGQGTKVEIK


 


SEQ ID: 10



(595-16 VK)



GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAG


 


TCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCAT


 


CCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGC


 


CTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGACGTTCGGCCAAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 11



(595-16 VK CDR1)



RASQSVSSYLA


 


SEQ ID: 12



(595-16 VK CDR1)



AGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCC


 


SEQ ID: 13



(595-16 VK CDR2)



DASNRAT


 


SEQ ID: 14



(595-16 VK CDR2)



GATGCATCCAACAGGGCCACT


 


SEQ ID: 15



(595-16 VK CDR3)



QQRSNWPPT


 


SEQ ID: 16



(595-16 VK CDR3)



CAGCAGCGTAGCAACTGGCCTCCGACG


 


SEQ ID: 17



(595-16-M1 VH)



EVQLVQSGGGLVKPGGSLRLSCAGSGFTFSSYSMHWLRQAPGKGLEWVSAIGTAGGTYYADSVKGRFTISRDNAKNS


 


LYLQMNSLRAEDTAVYYCAREYFFGSGNYGYWGQGTLVTVSS


 


SEQ ID: 18



(595-16-M1 VH)



GAGGTTCAGCTGGTGCAGTCTGGGGGAGGCTTGGTAAAACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGG


 


ATTCACTTTCAGTAGTTATTCTATGCACTGGCTTCGCCAGGCTCCAGGAAAAGGTCTGGAGTGGGTATCAGCTATTG


 


GTACTGCTGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCC


 


TTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGAGTATTTCTTTGGTTC


 


GGGGAATTATGGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 19



(591-37 VH)



EVQLVQSGGGLVHPGGSLRLSCAGSGFTFSRYALHWVRQAPGKGLEWVSAIGIGGGTFYADSVKGRFTISRDNAKNS


 


LYLQMNSLRAEDMAVYYCARDTYYDFFDAFDIWGQGTMVTVSS


 


SEQ ID: 20



(591-37 VH)



GAGGTTCAGCTGGTGCAGTCTGGGGGAGGCTTGGTACATCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGG


 


ATTCACCTTCAGTCGCTATGCTTTACACTGGGTTCGCCAGGCTCCAGGAAAAGGTCTGGAGTGGGTATCAGCTATTG


 


GTATTGGTGGTGGCACATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCC


 


TTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACATGGCTGTGTATTACTGTGCAAGAGATACGTATTACGATTT


 


TTTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 21



(591-37 VH CDR1)



RYALH


 


SEQ ID: 22



(591-37 VH CDR1)



CGCTATGCTTTACAC


 


SEQ ID: 23



(591-37 VH CDR2)



AIGIGGGTFYADSVKG


 


SEQ ID: 24



(591-37 VH CDR2)



GCTATTGGTATTGGTGGTGGCACATTCTATGCAGACTCCGTGAAGGGC


 


SEQ ID: 25



(591-37 VH CDR3)



DTYYDFFDAFDI


 


SEQ ID: 26



(591-37 VH CDR3)



GATACGTATTACGATTTTTTTGATGCTTTTGATATC


 


SEQ ID: 27



(591-37 VK)



DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISS


 


LQPEDFATYYCQQYDSYPLTFGGGTKVEIK


 


SEQ ID: 28



(591-37 VK)



GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAG


 


TCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCAT


 


CCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGC


 


CTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATGATAGTTACCCTCTCACTTTCGGCGGAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 29



(591-37 VK CDR1)



RASQGISSWLA


 


SEQ ID: 30



(591-37 VK CDR1)



CGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCC


 


SEQ ID: 31



(591-37 VK CDR2)



AASSLQS


 


SEQ ID: 32



(591-37 VK CDR2)



GCTGCATCCAGTTTGCAAAGT


 


SEQ ID: 33



(591-37 VK CDR3)



QQYDSYPLT


 


SEQ ID: 34



(591-37 VK CDR3)



CAACAGTATGATAGTTACCCTCTCACT


 


SEQ ID: 35



(591-37-M1 VH)



EVQLVQSGGGLVKPGGSLRLSCAGSGFTFSRYALHWVRQAPGKGLEWVSAIGIGGGTFYADSVKGRFTISRDNAKNS


 


LYLQMNSLRAEDTAVYYCARDTYYDFFDAFDIWGQGTMVTVSS


 


SEQ ID: 36



(591-37-M1 VH)



GAGGTTCAGCTGGTGCAGTCTGGGGGAGGCTTGGTAAAACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGG


 


ATTCACCTTCAGTCGCTATGCTTTACACTGGGTTCGCCAGGCTCCAGGAAAAGGTCTGGAGTGGGTATCAGCTATTG


 


GTATTGGTGGTGGCACATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCC


 


TTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATACGTATTACGATTT


 


TTTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 37



(358-11 VH)



QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGIHWVRQAPGKGLEWVAIIWHDGSNSYYVDSVKGRFTMSRDNSKN


 


TVYLQMNSLRAEDTAVYFCARIIGGAFDIWGQGTMVTVSS


 


SEQ ID: 38



(358-11 VH)



CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGG


 


ATTCACCTTCAGTAACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTATTATAT


 


GGCATGATGGAAGTAATTCATATTATGTAGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAATTCCAAGAAC


 


ACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAATAATTGGGGGCGC


 


TTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 39



(358-11 VH CDR1)



NYGIH


 


SEQ ID: 40



(358-11 VH CDR1)



CACAACTATGGCATA


 


SEQ ID: 41



(358-11 VH CDR2)



IIWHDGSNSYYVDSVKG


 


SEQ ID: 42



(358-11 VH CDR2)



ATTATATGGCATGATGGAAGTAATTCATATTATGTAGACTCCGTGAAGGGC


 


SEQ ID: 43



(358-11 VH CDR3)



IIGGAFDI


 


SEQ ID: 44



(358-11 VH CDR3)



ATAATTGGGGGCGCTTTTGATATC


 


SEQ ID: 45



(358-11 VK)



DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISS


 


LQPEDFATYYCQQYNSYPITFGQGTRLEIK


 


SEQ ID: 46



(358-11 VK)



GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAG


 


TCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCAT


 


CCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGC


 


CTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGATCACCTTCGGCCAAGGGACACG


 


ACTGGAGATCAAA


 


SEQ ID: 47



(358-11 VK CDR1)



RASQGISSWLA


 


SEQ ID: 48



(358-11 VK CDR1)



CGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCC


 


SEQ ID: 49



(358-11 VK CDR2)



AASSLQS


 


SEQ ID: 50



(358-11 VK CDR2)



GCTGCATCCAGTTTGCAAAGT


 


SEQ ID: 51



(358-11 VK CDR3)



QQYNSYPIT


 


SEQ ID: 52



(358-11 VK CDR3)



CAACAGTATAATAGTTACCCGATCACC


 


SEQ ID: 53



(358-11-M1 VH)



QVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGIHWVRQAPGKGLEWVAIIWHDGSNSYYVDSVKGRFTISRDNSKN


 


TLYLQMNSLRAEDTAVYFCARIIGGAFDIWGQGTMVTVSS


 


SEQ ID: 54



(358-11-M1 VH)



CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGG


 


ATTCACCTTCAGTAACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTATTATAT


 


GGCATGATGGAAGTAATTCATATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAAC


 


ACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAATAATTGGGGGCGC


 


TTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 55



(358-22 VH)



QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYGMHWVRQAPGKGLEWVTLIWYDGSNKYYADSVKGRFTISRDNSKN


 


TLYLQMNSLRVEDTAVYYCAREGFNWDAFDIWGQGTMVTVSS


 


SEQ ID: 56



(358-22 VH)



CAGGTGCAACTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGG


 


ATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGACACTTATAT


 


GGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAAC


 


ACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAGGGTTTAACTG


 


GGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 57



(358-22 VH CDR1)



SYGMH


 


SEQ ID: 58



(358-22 VH CDR1)



AGTTATGGCATGCAC


 


SEQ ID: 59



(358-22 VH CDR2)



LIWYDGSNKYYADSVKG


 


SEQ ID: 60



(358-22 VH CDR2)



CTAATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGC


 


SEQ ID: 61



(358-22 VH CDR3)



EGFNWDAFDI


 


SEQ ID: 62



(358-22 VH CDR3)



GAAGGGTTTAACTGGGATGCTTTTGATATC


 


SEQ ID: 63



(358-22 VK)



EIVLTQSPGTLSLSPGERATLSCRASQSVRISYLAWYQQKPGQAPRLLIYGTFSRATGIPDRFSGSGSGTDFTLTIS


 


RLEPEDFAVYYCQQYGSSMYTFGQGTKLEIK


 


SEQ ID: 64



(358-22 VK)



GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAG


 


TCAGAGTGTTCGCATCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTA


 


CATTCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGC


 


AGACTGGAGCCTGAAGATTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAATGTACACTTTTGGCCAGGGGAC


 


CAAGCTGGAGATCAAA


 


SEQ ID: 65



(358-22 VK CDR1)



RASQSVRISYLA


 


SEQ ID: 66



(358-22 VK CDR1)



AGGGCCAGTCAGAGTGTTCGCATCAGCTACTTAGCC


 


SEQ ID: 67



(358-22 VK CDR2)



GTFSRAT


 


SEQ ID: 68



(358-22 VK CDR2)



GGTACATTCAGCAGGGCCACT


 


SEQ ID: 69



(358-22 VK CDR3)



QQYGSSMYT


 


SEQ ID: 70



(358-22 VK CDR3)



CAGCAGTATGGTAGCTCAATGTACACT


 


SEQ ID: 71



(358-22-M1 VH)



QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYGMHWVRQAPGKGLEWVTLIWYDGSNKYYADSVKGRFTISRDNSKN


 


TLYLQMNSLRAEDTAVYYCAREGFNWDAFDIWGQGTMVTVSS


 


SEQ ID: 72



(358-22-M1 VH)



CAGGTGCAACTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGG


 


ATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGACACTTATAT


 


GGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAAC


 


ACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAGGGTTTAACTG


 


GGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 73



(597-120 VH)



EVHLVESGGGLVQSGGSLRLSCAASGFSISGYWMSWVRQAPGKGLEWVANIKQDGGEKYYGDSVKGRFTISRDNAEN


 


SLYLQMSSLRAEDTAVYYCVMAGGLDYWGQGALVTVSS


 


SEQ ID: 74



(597-120 VH)



GAGGTGCACCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGG


 


ATTCAGCATTAGTGGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAA


 


AGCAAGATGGAGGTGAGAAGTACTATGGGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAAAAC


 


TCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAATGGCGGGTGGCCTTGA


 


CTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCA


 


SEQ ID: 75



(597-120 VH CDR1)



GYWMS


 


SEQ ID: 76



(597-120 VH CDR1)



GGCTATTGGATGAGC


 


SEQ ID: 77



(597-120 VH CDR2)



NIKQDGGEKYYGDSVKG


 


SEQ ID: 78



(597-120 VH CDR2)



AACATAAAGCAAGATGGAGGTGAGAAGTACTATGGGGACTCTGTGAAGGGC


 


SEQ ID: 79



(597-120 VH CDR3)



AGGLDY


 


SEQ ID: 80



(597-120 VH CDR3)



GCGGGTGGCCTTGACTAC


 


SEQ ID: 81



(597-120 VK)



EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISS


 


LEPEDFAVYYCQQRSNWYTFGQGTKLEIK


 


SEQ ID: 82



(597-120 VK)



GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAG


 


TCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCAT


 


CCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGC


 


CTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGTACACTTTTGGCCAGGGGACCAAGCT


 


GGAGATCAAA


 


SEQ ID: 83



(597-120 VK CDR1)



RASQSVSSYLA


 


SEQ ID: 84



(597-120 VK CDR1)



AGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCC


 


SEQ ID: 85



(597-120 VK CDR2)



DASNRAT


 


SEQ ID: 86



(597-120 VK CDR2)



GATGCATCCAACAGGGCCACT


 


SEQ ID: 87



(597-120 VK CDR3)



QQRSNWYT


 


SEQ ID: 88



(597-120 VK CDR3)



CAGCAGCGTAGCAACTGGTACACT


 


SEQ ID: 89



(597-120-M1 VH)



EVQLVESGGGLVQPGGSLRLSCAASGFSISGYWMSWVRQAPGKGLEWVANIKQDGGEKYYGDSVKGRFTISRDNAKN


 


SLYLQMNSLRAEDTAVYYCVMAGGLDYWGQGTLVTVSS


 


SEQ ID: 90



(597-120-M1 VH)



GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGG


 


ATTCAGCATTAGTGGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAA


 


AGCAAGATGGAGGTGAGAAGTACTATGGGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAC


 


TCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAATGGCGGGTGGCCTTGA


 


CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 91



(311-3 VH)



QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWNWIRQPPGMGLEWIGEIHQSGGPHYNPSLKSRVSISVDTSKNQ


 


VNLKLSSVTAADTAIYYCTELDDYWGQGTLVTVSS


 


SEQ ID: 92



(311-3 VH)



CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGG


 


TGGGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGAATGGGGCTGGAATGGATTGGAGAAATCC


 


ATCAAAGTGGAGGCCCCCACTACAACCCGTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAAAACCAG


 


GTCAACCTGAAGCTGAGCTCTGTGACCGCCGCGGATACGGCTATTTATTACTGTACGGAGTTGGATGACTATTGGGG


 


CCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 93



(311-3 VH CDR1)



GYYWN


 


SEQ ID: 94



(311-3 VH CDR1)



GGTTACTACTGGAAC


 


SEQ ID: 95



(311-3 VH CDR2)



EIHQSGGPHYNPSLKS


 


SEQ ID: 96



(311-3 VH CDR2)



GAAATCCATCAAAGTGGAGGCCCCCACTACAACCCGTCCCTCAAGAGT


 


SEQ ID: 97



(311-3 VH CDR3)



LDDY


 


SEQ ID: 98



(311-3 VH CDR3)



TTGGATGACTAT


 


SEQ ID: 99



(311-3 VK)



EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYNASNRATGIPARFSGSGSGTDFTLTIGS


 


LEPEDFAVYYCQQRSNWPRTFGQGTKVEIK


 


SEQ ID: 100



(311-3 VK)



GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAG


 


TCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATAATGCAT


 


CCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCGGCAGC


 


CTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCGGACGTTCGGCCAAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 101



(311-3 VK CDR1)



RASQSVSSYLA


 


SEQ ID: 102



(311-3 VK CDR1)



AGGGCCAGTCAGAGTGTTAGCAGCTACTTAGCC


 


SEQ ID: 103



(311-3 VK CDR2)



NASNRAT


 


SEQ ID: 104



(311-3 VK CDR2)



AATGCATCCAACAGGGCCACT


 


SEQ ID: 105



(311-3 VK CDR3)



QQRSNWPRT


 


SEQ ID: 106



(311-3 VK CDR3)



CAGCAGCGTAGCAACTGGCCTCGGACG


 


SEQ ID: 107



(311-3-M1 VH)



QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWNWIRQPPGKGLEWIGEIHQSGGPHYNPSLKSRVTISVDTSKNQ


 


FSLKLSSVTAADTAVYYCTELDDYWGQGTLVTVSS


 


SEQ ID: 108



(311-3-M1 VH)



CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGG


 


TGGGTCCTTCAGTGGTTACTACTGGAACTGGATTCGCCAGCCCCCAGGAAAGGGGCTGGAATGGATTGGAGAAATCC


 


ATCAAAGTGGAGGCCCCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAAAACCAG


 


TTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGATACGGCTGTGTATTACTGTACGGAGTTGGATGACTATTGGGG


 


CCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 109



(311-3-M1 VK)



EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISS


 


LEPEDFAVYYCQQRSNWPRTFGQGTKVEIK


 


SEQ ID: 110



(311-3-M1 VK)



GAAATTGTGTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAG


 


TCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCAT


 


CCAACAGGGCCACTGGCATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGC


 


CTAGAGCCTGAAGATTTTGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCGGACGTTCGGCCAAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 111



(311-3-M1 VK CDR2)



DASNRAT


 


SEQ ID: 112



(311-3-M1 VK CDR2)



GATGCATCCAACAGGGCCACT


 


SEQ ID: 113



(312-19 VH)



QVQLVQSGAEVKKPGSSVKVSCKASGGTFNNFVIGWVRQAPGQGLEWMGRIIPILDIANYAQKFQGRVTITADKSTS


 


TVYMELNSLRSEDTAVYYCARTGNYYKPYDYWGQGTLVTVSS


 


SEQ ID: 114



(312-19 VH)



CAGGTCCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGG


 


AGGCACCTTCAACAACTTCGTTATCGGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAAGGATCA


 


TCCCTATCCTTGATATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGC


 


ACAGTTTACATGGAGCTGAACAGCCTGAGATCTGAGGACACGGCCGTATACTACTGTGCGAGAACGGGGAATTATTA


 


TAAGCCCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 115



(312-19 VH CDR1)



NFVIG


 


SEQ ID: 116



(312-19 VH CDR1)



AACTTCGTTATCGGC


 


SEQ ID: 117



(312-19 VH CDR2)



RIIPILDIANYAQKFQG


 


SEQ ID: 118



(312-19 VH CDR2)



AGGATCATCCCTATCCTTGATATAGCAAACTACGCACAGAAGTTCCAGGGC


 


SEQ ID: 119



(312-19 VH CDR3)



TGNYYKPYDY


 


SEQ ID: 120



(312-19 VH CDR3)



ACGGGGAATTATTATAAGCCCTATGACTAC


 


SEQ ID: 121



(312-19 VK)



EIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGVPSRFSGSGSGTDFTLTINS


 


LEAEDAAAYYCHQSSSLPITFGQGTRLEIK


 


SEQ ID: 122



(312-19 VK)



GAAATTGTGCTGACTCAGTCTCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAG


 


TCAGAGCATTGGTAGTAGCTTACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTT


 


CCCAGTCCTTCTCAGGGGTCCCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGC


 


CTGGAAGCTGAAGATGCTGCAGCGTATTACTGTCATCAGAGTAGTAGTTTACCGATCACCTTCGGCCAAGGGACACG


 


ACTGGAGATCAAA


 


SEQ ID: 123



(312-19 VK CDR1)



RASQSIGSSLH


 


SEQ ID: 124



(312-19 VK CDR1)



CGGGCCAGTCAGAGCATTGGTAGTAGCTTACAC


 


SEQ ID: 125



(312-19 VK CDR2)



YASQSFS


 


SEQ ID: 126



(312-19 VK CDR2)



TATGCTTCCCAGTCCTTCTCA


 


SEQ ID: 127



(312-19 VK CDR3)



HQSSSLPIT


 


SEQ ID: 128



(312-19 VK CDR3)



CATCAGAGTAGTAGTTTACCGATCACC


 


SEQ ID: 129



(312-19-M1 VH)



QVQLVQSGAEVKKPGSSVKVSCKASGGTFNNFVIGWVRQAPGQGLEWMGRIIPILDIANYAQKFQGRVTITADKSTS


 


TAYMELSSLRSEDTAVYYCARTGNYYKPYDYWGQGTLVTVSS


 


SEQ ID: 130



(312-19-M1 VH)



CAGGTCCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGG


 


AGGCACCTTCAACAACTTCGTTATCGGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAAGGATCA


 


TCCCTATCCTTGATATAGCAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGC


 


ACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTATACTACTGTGCGAGAACGGGGAATTATTA


 


TAAGCCCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 131



(591-33 VH)



EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMSWVRQAPGKGLEWMANIKQDGSETHYVDSVKGRFTISRDNAKN


 


SLYLQMNSLRAEDTAVYYCAIGDYWGQGTLVTVSS


 


SEQ ID: 132



(591-33 VH)



GAGGTGCAGTTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGG


 


ATTCACCTTTAGTCGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGATGGCCAACATAA


 


AGCAAGATGGAAGTGAGACACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAC


 


TCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGATTGGTGACTACTGGGG


 


CCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 133



(591-33 VH CDR1)



RYWMS


 


SEQ ID: 134



(591-33 VH CDR1)



CGCTATTGGATGAGC


 


SEQ ID: 135



(591-33 VH CDR2)



NIKQDGSETHYVDSVKG


 


SEQ ID: 136



(591-33 VH CDR2)



AACATAAAGCAAGATGGAAGTGAGACACACTATGTGGACTCTGTGAAGGGC


 


SEQ ID: 137



(591-33 VH CDR3)



GDY


 


SEQ ID: 138



(591-33 VH CDR3)



GGTGACTAC


 


SEQ ID: 139



(591-33 VK)



DIQMTQSPSSLSASVGDRVTITCRASQDISSWLAWYQQKPEKAPKSLIYAASSLQSGVPSRFSGSGSGTDFTLTISS


 


LQPEDFATYYCQQYKSYPLTFGGGTKVEIK


 


SEQ ID: 140



(591-33 VK)



GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAG


 


TCAGGATATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCAT


 


CCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGC


 


CTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAAAAGTTACCCGCTCACTTTCGGCGGAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 141



(591-33 VK CDR1)



RASQDISSWLA


 


SEQ ID: 142



(591-33 VK CDR1)



CGGGCGAGTCAGGATATTAGCAGCTGGTTAGCC


 


SEQ ID: 143



(591-33 VK CDR2)



AASSLQS


 


SEQ ID: 144



(591-33 VK CDR2)



GCTGCATCCAGTTTGCAAAGT


 


SEQ ID: 145



(591-33 VK CDR3)



QQYKSYPLT


 


SEQ ID: 146



(591-33 VK CDR3)



CAACAGTATAAAAGTTACCCGCTCACT


 


SEQ ID: 147



(591-33-M1 VH)



EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMSWVRQAPGKGLEWVANIKQDGSETHYVDSVKGRFTISRDNAKN


 


SLYLQMNSLRAEDTAVYYCAIGDYWGQGTLVTVSS


 


SEQ ID: 148



(591-33-M1 VH)



GAGGTGCAGTTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGG


 


ATTCACCTTTAGTCGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAA


 


AGCAAGATGGAAGTGAGACACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAC


 


TCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGATTGGTGACTACTGGGG


 


CCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 149



(114-41 VH)



QVQLVQSGAEVKTPGASVKVSCKASGYTFTSFGISWVRQAPGQGLEWMGWISVYNDYTNYAQKFQGRVTMTTDTSTS


 


TAYMELRSLRSDDTAMYYCARKRGGDMDYWGQGTLVTVSS


 


SEQ ID: 150



(114-41 VH)



CAGGTTCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGG


 


TTACACCTTTACCAGCTTTGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCA


 


GCGTTTACAATGATTACACAAACTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGC


 


ACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCCATGTATTACTGTGCGAGAAAGAGGGGTGGGGA


 


TATGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 151



(114-41 VH CDR1)



SFGIS


 


SEQ ID: 152



(114-41 VH CDR1)



AGCTTTGGTATCAGC


 


SEQ ID: 153



(114-41 VH CDR2)



WISVYNDYTNYAQKFQG


 


SEQ ID: 154



(114-41 VH CDR2)



TGGATCAGCGTTTACAATGATTACACAAACTATGCACAGAAGTTCCAGGGC


 


SEQ ID: 155



(114-41 VH CDR3)



KRGGDMDY


 


SEQ ID: 156



(114-41 VH CDR3)



AAGAGGGGTGGGGATATGGACTAT


 


SEQ ID: 157



(114-41 VK)



DIQMTQSPSSVSASVGDRVTITCRASQDISSWLAWYQHKPGKAPKLLIYLASSLQSGVPSRFSGSGSGTDFTLTISS


 


LQPEDFATYYCQQANSFPWTFGQGTKVEIK


 


SEQ ID: 158



(114-41 VK)



GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAG


 


TCAGGATATTAGCAGCTGGTTAGCCTGGTATCAGCATAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATCTTGCAT


 


CCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGC


 


CTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGGCTAATAGTTTTCCGTGGACGTTCGGCCAAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 159



(114-41 VK CDR1)



RASQDISSWLA


 


SEQ ID: 160



(114-41 VK CDR1)



CGGGCGAGTCAGGATATTAGCAGCTGGTTAGCC


 


SEQ ID: 161



(114-41 VK CDR2)



LASSLQS


 


SEQ ID: 162



(114-41 VK CDR2)



CTTGCATCCAGTTTGCAAAGT


 


SEQ ID: 163



(114-41 VK CDR3)



QQANSFPWT


 


SEQ ID: 164



(114-41 VK CDR3)



CAACAGGCTAATAGTTTTCCGTGGACG


 


SEQ ID: 165



(114-41-M1 VH)



QVQLVQSGAEVKKPGASVKVSCKASGYTFTSFGISWVRQAPGQGLEWMGWISVYNDYTNYAQKFQGRVTMTTDTSTS


 


TAYMELRSLRSDDTAVYYCARKRGGDMDYWGQGTLVTVSS


 


SEQ ID: 166



(114-41-M1 VH)



CAGGTTCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGG


 


TTACACCTTTACCAGCTTTGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCA


 


GCGTTTACAATGATTACACAAACTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGC


 


ACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAAAGAGGGGTGGGGA


 


TATGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 167



(306-155 VH)



EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSIS


 


TAYLQWSSLKASDTAMYYCARQGSGWYGNYFDYWGQGTLVTVSS


 


SEQ ID: 168



(306-155 VH)



GAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGG


 


ATACAGTTTTACCAGCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCT


 


ATCCTGGTGACTCTGATACCAGATACAGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGC


 


ACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCATGTATTACTGTGCGAGACAGGGCAGCGGCTG


 


GTACGGGAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 169



(306-155 VH CDR1)



SYWIG


 


SEQ ID: 170



(306-155 VH CDR1)



AGCTACTGGATCGGC


 


SEQ ID: 171



(306-155 VH CDR2)



IIYPGDSDTRYSPSFQG


 


SEQ ID: 172



(306-155 VH CDR2)



ATCATCTATCCTGGTGACTCTGATACCAGATACAGCCCGTCCTTCCAAGGC


 


SEQ ID: 173



(306-155 VH CDR3)



QGSGWYGNYFDY


 


SEQ ID: 174



(306-155 VH CDR3)



TGGTACGGGAACTACTTTGACTACCAGGGCAGCGGC


 


SEQ ID: 175



(306-155 VK)



EIVLTQSPGTLSLSPGERATLSCRASQSFSRGYLAWYQQKPGQAPRLLIYGASSRVTGIPDRFSGSGSGTDFTLTIS


 


RLEPEDFAVYYCQQYDSSPYTFGQGTKLEIK


 


SEQ ID: 176



(306-155 VK)



GAAATTGTGTTGACGCAGTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAG


 


TCAGAGTTTTAGCAGAGGCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTG


 


CATCCAGCAGGGTCACTGGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGC


 


AGACTGGAGCCTGAAGATTTTGCGGTGTATTACTGTCAGCAGTATGATAGCTCACCGTACACTTTTGGCCAGGGGAC


 


CAAGCTGGAGATCAAA


 


SEQ ID: 177



(306-155 VK CDR1)



RASQSFSRGYLA


 


SEQ ID: 178



(306-155 VK CDR1)



AGGGCCAGTCAGAGTTTTAGCAGAGGCTACTTAGCC


 


SEQ ID: 179



(306-155 VK CDR2)



GASSRVT


 


SEQ ID: 180



(306-155 VK CDR2)



GGTGCATCCAGCAGGGTCACT


 


SEQ ID: 181



(306-155 VK CDR3)



QQYDSSPYT


 


SEQ ID: 182



(306-155 VK CDR3)



CAGCAGTATGATAGCTCACCGTACACT


 


SEQ ID: 183



(14-173 VH)



EVQLVESGGGLVQPGGSLRLSCAASGFTFSSFWMSWVRQAPGKGLEWVANIKHDGSEQDYVDSVKGRFTISRDNAKN


 


SLYLQMNSLRAEDTAVYYCARGGIWFGPWGQGTLVTVSS


 


SEQ ID: 184



(14-173 VH)



GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGG


 


ATTCACCTTTAGTAGCTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAA


 


AGCACGATGGAAGTGAGCAAGACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAC


 


TCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGGGGGTATCTGGTT


 


CGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 185



(14-173 VH CDR1)



SFWMS


 


SEQ ID: 186



(14-173 VH CDR1)



AGCTTTTGGATGAGT


 


SEQ ID: 187



(14-173 VH CDR2)



NIKHDGSEQDYVDSVKG


 


SEQ ID: 188



(14-173 VH CDR2)



AACATAAAGCACGATGGAAGTGAGCAAGACTATGTGGACTCTGTGAAGGGC


 


SEQ ID: 189



(14-173 VH CDR3)



GGIWFGP


 


SEQ ID: 190



(14-173 VH CDR3)



GGGGGTATCTGGTTCGGCCCC


 


SEQ ID: 191



(14-173 VK)



VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPEVLIYAVSTLQSGVPSRFSGSGSGTDFTLTISC


 


LQSEDFATYYCQQYYSFPYTFGQGTKLEIK


 


SEQ ID: 192



(14-173 VK)



GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAG


 


TCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGGTCCTGATCTATGCTGTAT


 


CCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGC


 


CTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAA


 


GCTGGAGATCAAA


 


SEQ ID: 193



(14-173 VK CDR1)



RMSQGISSYLA


 


SEQ ID: 194



(14-173 VK CDR1)



CGGATGAGTCAGGGCATTAGCAGTTATTTAGCC


 


SEQ ID: 195



(14-173 VK CDR2)



AVSTLQS


 


SEQ ID: 196



(14-173 VK CDR2)



GCTGTATCCACTTTGCAAAGT


 


SEQ ID: 197



(14-173 VK CDR3)



QQYYSFPYT


 


SEQ ID: 198



(14-173 VK CDR3)



CAACAGTATTATAGTTTCCCGTACACT


 


SEQ ID: 199



(14-173-M1 VK)



VIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAVSTLQSGVPSRFSGSGSGTDFTLTISS


 


LQSEDFATYYCQQYYSFPYTFGQGTKLEIK


 


SEQ ID: 200



(14-173-M1 VK)



GTCATCTGGATGACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAG


 


TCAGGGCATTAGCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGTAT


 


CCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTCT


 


CTGCAGTCTGAAGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAA


 


GCTGGAGATCAAA


 


SEQ ID: 201



(303-8 VH)



QVQLVQSGAEVKKPGSSVKVSCKASGGSFSIYVISWVRQAPGQGLEWMGRIIPILGTTNYAQKFQGRVTITADKSTS


 


TAYMELSSLRSEDTAVYYCARPDSPNHSNTFDYWGQGTLVTVSS


 


SEQ ID: 202



(303-8 VH)



CAGGTCCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGG


 


AGGCTCCTTCAGCATCTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCA


 


TCCCTATCCTTGGTACAACAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGC


 


ACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGACCGGACTCCCCGAA


 


CCATAGTAATACATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 203



(303-8 VH CDR1)



IYVIS


 


SEQ ID: 204



(303-8 VH CDR1)



ATCTATGTTATCAGC


 


SEQ ID: 205



(303-8 VH CDR2)



RIIPILGTTNYAQKFQG


 


SEQ ID: 206



(303-8 VH CDR2)



AGGATCATCCCTATCCTTGGTACAACAAACTACGCACAGAAGTTCCAGGGC


 


SEQ ID: 207



(303-8 VH CDR3)



PDSPNHSNTFDY


 


SEQ ID: 208



(303-8 VH CDR3)



CCGGACTCCCCGAACCATAGTAATACATTTGACTAC


 


SEQ ID: 209



(303-8 VK)



DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYGASSLQSGVPSRFSGSGSGTDFTLTISS


 


LQPEDFATYYCQQYNSYPYTFGQGTKLEIK


 


SEQ ID: 210



(303-8 VK)



GACATCCAGATGACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAG


 


TCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGGTGCAT


 


CCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGC


 


CTGCAGCCTGAAGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTACACTTTTGGCCAGGGGACCAA


 


GCTGGAGATCAAA


 


SEQ ID: 211



(303-8 VK CDR1)



RASQGISSWLA


 


SEQ ID: 212



(303-8 VK CDR1)



CGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCC


 


SEQ ID: 213



(303-8 VK CDR2)



GASSLQS


 


SEQ ID: 214



(303-8 VK CDR2)



GGTGCATCCAGTTTGCAAAGT


 


SEQ ID: 215



(303-8 VK CDR3)



QQYNSYPYT


 


SEQ ID: 216



(303-8 VK CDR3)



CAACAGTATAATAGTTACCCGTACACT


 


SEQ ID: 217



(312-56 VH)



QVQVVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPILGTAKYAQKFQGRVTIIADKSTS


 


TAYMELSSLRSEDTAVYYCARDQDYYGMDVWGQGTTVTVSS


 


SEQ ID: 218



(312-56 VH)



CAGGTCCAGGTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGG


 


AGGCACCTTCAGCAGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCA


 


TCCCTATCCTTGGTACAGCAAAGTACGCACAGAAGTTCCAGGGCAGAGTCACGATTATCGCGGACAAATCCACGAGC


 


ACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCAGGACTACTA


 


CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA


 


SEQ ID: 219



(312-56 VH CDR1)



SYAIS


 


SEQ ID: 220



(312-56 VH CDR1)



AGCTATGCTATCAGC


 


SEQ ID: 221



(312-56 VH CDR2)



RIIPILGTAKYAQKFQG


 


SEQ ID: 222



(312-56 VH CDR2)



AGGATCATCCCTATCCTTGGTACAGCAAAGTACGCACAGAAGTTCCAGGGC


 


SEQ ID: 223



(312-56 VH CDR3)



DQDYYGMDV


 


SEQ ID: 224



(312-56 VH CDR3)



GATCAGGACTACTACGGTATGGACGTC


 


SEQ ID: 225



(312-56 VK)



DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQHKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISS


 


LQPEDFATYYCQQTNNFPWTFGQGTKVEIK


 


SEQ ID: 226



(312-56 VK)



GACATCCAGATGACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAG


 


TCAGGGTATTAGCAGCTGGTTAGCCTGGTATCAGCATAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCAT


 


CCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGC


 


CTGCAGCCTGAAGATTTTGCAACTTACTATTGTCAACAGACTAATAATTTCCCGTGGACGTTCGGCCAAGGGACCAA


 


GGTGGAGATCAAA


 


SEQ ID: 227



(312-56 VK CDR1)



RASQGISSWLA


 


SEQ ID: 228



(312-56 VK CDR1)



CGGGCGAGTCAGGGTATTAGCAGCTGGTTAGCC


 


SEQ ID: 229



(312-56 VK CDR2)



AASSLQS


 


SEQ ID: 230



(312-56 VK CDR2)



GCTGCATCCAGTTTGCAAAGT


 


SEQ ID: 231



(312-56 VK CDR3)



QQTNNFPWT


 


SEQ ID: 232



(312-56 VK CDR3)



CAACAGACTAATAATTTCCCGTGGACG


 


SEQ ID: 233



(595-16 VH with leader)



MEFVLSWVFLVAIIKGVHCEVQLVQSGGGLGHPGGSLRLSCAGSGFTFSSYSMHWLRQAPGKGLKWVSAIGTAGGTY


 


YADSVKGRFTISRDNAKNSFYLQMNSLRAEDMAVYYCAREYFFGSGNYGYWGQGTLVTASS


 


SEQ ID: 234



(595-16 VH with leader)



ATGGAGTTTGTGCTGAGCTGGGTTTTCCTTGTTGCTATCATAAAAGGTGTCCACTGTGAGGTTCAGCTGGTGCAGTC


 


TGGGGGAGGCTTGGGACATCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAGTTATT


 


CTATGCACTGGCTTCGCCAGGCTCCAGGAAAAGGTCTGAAGTGGGTATCAGCTATTGGTACTGCTGGTGGCACATAC


 


TATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCCTTCTATCTTCAAATGAACAG


 


CCTGAGAGCCGAGGACATGGCTGTGTATTACTGTGCAAGAGAGTATTTCTTTGGTTCGGGGAATTATGGATACTGGG


 


GCCAGGGAACCCTGGTCACCGCCTCCTCA


 


SEQ ID: 235



(595-16 VK with leader)



MEAPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATG


 


IPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTFGQGTKVEIK


 


SEQ ID: 236



(595-16 VK with leader)



ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACA


 


GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCT


 


ACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGC


 


ATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTT


 


TGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCCGACGTTCGGCCAAGGGACCAAGGTGGAGATCAAA


 


SEQ ID: 237



(595-16-M1 VH with leader)



MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVKPGGSLRLSCAGSGFTFSSYSMHWLRQAPGKGLEWVSAIGTAGGTY


 


YADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREYFFGSGNYGYWGQGTLVTVSS


 


SEQ ID: 238



(595-16-M1 VH with leader)



ATGGAGTTTGTGCTGAGCTGGGTTTTCCTTGTTGCTATCTTAAAAGGTGTCCAGTGTGAGGTTCAGCTGGTGCAGTC


 


TGGGGGAGGCTTGGTAAAACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAGTTATT


 


CTATGCACTGGCTTCGCCAGGCTCCAGGAAAAGGTCTGGAGTGGGTATCAGCTATTGGTACTGCTGGTGGCACATAC


 


TATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCCTTGTATCTTCAAATGAACAG


 


CCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGAGTATTTCTTTGGTTCGGGGAATTATGGATACTGGG


 


GCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 239



(591-37 VH with leader)



MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVHPGGSLRLSCAGSGFTFSRYALHWVRQAPGKGLEWVSAIGIGGGTF


 


YADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARDTYYDFFDAFDIWGQGTMVTVSS


 


SEQ ID: 240



(591-37 VH with leader)



ATGGAGTTTGTGCTGAGCTGGGTTTTCCTTGTTGCTATATTAAAAGGTGTCCAGTGTGAGGTTCAGCTGGTGCAGTC


 


TGGGGGAGGCTTGGTACATCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTCGCTATG


 


CTTTACACTGGGTTCGCCAGGCTCCAGGAAAAGGTCTGGAGTGGGTATCAGCTATTGGTATTGGTGGTGGCACATTC


 


TATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCCTTGTATCTTCAAATGAACAG


 


CCTGAGAGCCGAGGACATGGCTGTGTATTACTGTGCAAGAGATACGTATTACGATTTTTTTGATGCTTTTGATATCT


 


GGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 241



(591-37 VK with leader)



MDMRVLAQLLGLLLLCFPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQ


 


SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYDSYPLTFGGGTKVEIK


 


SEQ ID: 242



(591-37 VK with leader)



ATGGACATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGAT


 


GACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTA


 


GCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGA


 


AGATTTTGCAACTTATTACTGCCAACAGTATGATAGTTACCCTCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCA


 


AA


 


SEQ ID: 243



(591-37-M1 VH with leader)



MEFVLSWVFLVAILKGVQCEVQLVQSGGGLVKPGGSLRLSCAGSGFTFSRYALHWVRQAPGKGLEWVSAIGIGGGTF


 


YADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDTYYDFFDAFDIWGQGTMVTVSS


 


SEQ ID: 244



(591-37-M1 VH with leader)



ATGGAGTTTGTGCTGAGCTGGGTTTTCCTTGTTGCTATATTAAAAGGTGTCCAGTGTGAGGTTCAGCTGGTGCAGTC


 


TGGGGGAGGCTTGGTAAAACCTGGGGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTCGCTATG


 


CTTTACACTGGGTTCGCCAGGCTCCAGGAAAAGGTCTGGAGTGGGTATCAGCTATTGGTATTGGTGGTGGCACATTC


 


TATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACTCCTTGTATCTTCAAATGAACAG


 


CCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATACGTATTACGATTTTTTTGATGCTTTTGATATCT


 


GGGGCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 245



(358-11 VH with leader)



MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGIHWVRQAPGKGLEWVAIIWHDGSNS


 


YYVDSVKGRFTMSRDNSKNTVYLQMNSLRAEDTAVYFCARIIGGAFDIWGQGTMVTVSS


 


SEQ ID: 246



(358-11 VH with leader)



ATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTC


 


TGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATG


 


GCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTATTATATGGCATGATGGAAGTAATTCA


 


TATTATGTAGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAATTCCAAGAACACGGTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAATAATTGGGGGCGCTTTTGATATCTGGGGCCAAG


 


GGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 247



(358-11 VK with leader)



MDMRVLAQLLGLLLLCFPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYAASSLQ


 


SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPITFGQGTRLEIK


 


SEQ ID: 248



(358-11 VK with leader)



ATGGACATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGAT


 


GACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTA


 


GCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGA


 


AGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGATCACCTTCGGCCAAGGGACACGACTGGAGATCA


 


AA


 


SEQ ID: 249



(358-11-M1 VH with leader)



MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGIHWVRQAPGKGLEWVAIIWHDGSNS


 


YYVDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYFCARIIGGAFDIWGQGTMVTVSS


 


SEQ ID: 250



(358-11-M1 VH with leader)



ATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTC


 


TGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATG


 


GCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTATTATATGGCATGATGGAAGTAATTCA


 


TATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAATAATTGGGGGCGCTTTTGATATCTGGGGCCAAG


 


GGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 251



(358-22 VH with leader)



MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFRSYGMHWVRQAPGKGLEWVTLIWYDGSNK


 


YYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCAREGFNWDAFDIWGQGTMVTVSS


 


SEQ ID: 252



(358-22 VH with leader)



ATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAACTGGTGGAGTC


 


TGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAGTTATG


 


GCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGACACTTATATGGTATGATGGAAGTAATAAA


 


TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA


 


CAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAGGGTTTAACTGGGATGCTTTTGATATCTGGG


 


GCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 253



(358-22 VK with leader)



METPAQLLFLLLLWLPDTTGEIVLTQSPGTLSLSPGERATLSCRASQSVRISYLAWYQQKPGQAPRLLIYGTFSRAT


 


GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSMYTFGQGTKLEIK


 


SEQ ID: 254



(358-22 VK with leader)



ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCA


 


GTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTCGCATCA


 


GCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTACATTCAGCAGGGCCACT


 


GGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGA


 


TTTTGCAGTGTATTACTGTCAGCAGTATGGTAGCTCAATGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAA


 


SEQ ID: 255



(358-22-M1 VH with leader)



MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFRSYGMHWVRQAPGKGLEWVTLIWYDGSNK


 


YYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREGFNWDAFDIWGQGTMVTVSS


 


SEQ ID: 256



(358-22-M1 VH with leader)



ATGGAGTTTGGGCTGAGCTGGGTTTTCCTCGTTGCTCTTTTAAGAGGTGTCCAGTGTCAGGTGCAACTGGTGGAGTC


 


TGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAGTTATG


 


GCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGACACTTATATGGTATGATGGAAGTAATAAA


 


TACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAGGGTTTAACTGGGATGCTTTTGATATCTGGG


 


GCCAAGGGACAATGGTCACCGTCTCTTCA


 


SEQ ID: 257



(597-120 VH with leader)



MELGLSWVFLVAILEGVQCEVHLVESGGGLVQSGGSLRLSCAASGFSISGYWMSWVRQAPGKGLEWVANIKQDGGEK


 


YYGDSVKGRFTISRDNAENSLYLQMSSLRAEDTAVYYCVMAGGLDYWGQGALVTVSS


 


SEQ ID: 258



(597-120 VH with leader)



ATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTTCAGTGTGAGGTGCACCTGGTGGAGTC


 


TGGGGGAGGCTTGGTCCAGTCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGGCTATT


 


GGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAGGTGAGAAG


 


TACTATGGGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAAAACTCACTGTATCTGCAAATGAG


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAATGGCGGGTGGCCTTGACTACTGGGGCCAGGGAGCCC


 


TGGTCACCGTCTCCTCA


 


SEQ ID: 259



(597-120 VK with leader)



MEAPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATG


 


IPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWYTFGQGTKLEIK


 


SEQ ID: 260



(597-120 VK with leader)



ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACA


 


GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCT


 


ACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGC


 


ATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTT


 


TGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAA


 


SEQ ID: 261



(597-120-M1 VH with leader)



MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFSISGYWMSWVRQAPGKGLEWVANIKQDGGEK


 


YYGDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCVMAGGLDYWGQGTLVTVSS


 


SEQ ID: 262



(597-120-M1 VH with leader)



ATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTTCAGTGTGAGGTGCAGCTGGTGGAGTC


 


TGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGGCTATT


 


GGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAGGTGAGAAG


 


TACTATGGGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAATGGCGGGTGGCCTTGACTACTGGGGCCAGGGAACCC


 


TGGTCACCGTCTCCTCA


 


SEQ ID: 263



(311-3 VH with leader)



MKHLWFFLLLVAAPRWVLSQVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWNWIRQPPGMGLEWIGEIHQSGGPH


 


YNPSLKSRVSISVDTSKNQVNLKLSSVTAADTAIYYCTELDDYWGQGTLVTVSS


 


SEQ ID: 264



(311-3 VH with leader)



ATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTG


 


GGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACT


 


ACTGGAACTGGATCCGCCAGCCCCCAGGAATGGGGCTGGAATGGATTGGAGAAATCCATCAAAGTGGAGGCCCCCAC


 


TACAACCCGTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAAAACCAGGTCAACCTGAAGCTGAGCTC


 


TGTGACCGCCGCGGATACGGCTATTTATTACTGTACGGAGTTGGATGACTATTGGGGCCAGGGAACCCTGGTCACCG


 


TCTCCTCA


 


SEQ ID: 265



(311-3 VK with leader)



MEAPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYNASNRATG


 


IPARFSGSGSGTDFTLTIGSLEPEDFAVYYCQQRSNWPRTFGQGTKVEIK


 


SEQ ID: 266



(311-3 VK with leader)



ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACA


 


GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCT


 


ACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATAATGCATCCAACAGGGCCACTGGC


 


ATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCGGCAGCCTAGAGCCTGAAGATTT


 


TGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAGATCAAA


 


SEQ ID: 267



(311-3-M1 VH with leader)



MKHLWFFLLLVAAPRWVLSQVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWNWIRQPPGKGLEWIGEIHQSGGPH


 


YNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCTELDDYWGQGTLVTVSS


 


SEQ ID: 268



(311-3-M1 VH with leader)



ATGAAACACCTGTGGTTCTTCCTCCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCCCAGGTGCAGCTACAGCAGTG


 


GGGCGCAGGACTGTTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACT


 


ACTGGAACTGGATTCGCCAGCCCCCAGGAAAGGGGCTGGAATGGATTGGAGAAATCCATCAAAGTGGAGGCCCCCAC


 


TACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAAAACCAGTTCTCCCTGAAGCTGAGCTC


 


TGTGACCGCCGCGGATACGGCTGTGTATTACTGTACGGAGTTGGATGACTATTGGGGCCAGGGAACCCTGGTCACCG


 


TCTCCTCA


 


SEQ ID: 269



(311-3-M1 VK with leader)



MEAPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATG


 


IPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPRTFGQGTKVEIK


 


SEQ ID: 270



(311-3-M1 VK with leader)



ATGGAAGCCCCAGCTCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACACA


 


GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTAGCAGCT


 


ACTTAGCCTGGTACCAACAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGATGCATCCAACAGGGCCACTGGC


 


ATCCCAGCCAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGAAGATTT


 


TGCAGTTTATTACTGTCAGCAGCGTAGCAACTGGCCTCGGACGTTCGGCCAAGGGACCAAGGTGGAGATCAAA


 


SEQ ID: 271



(312-19 VH with leader)



MDWTWRFLFVVAAATGVQSQVQLVQSGAEVKKPGSSVKVSCKASGGTFNNFVIGWVRQAPGQGLEWMGRIIPILDIA


 


NYAQKFQGRVTITADKSTSTVYMELNSLRSEDTAVYYCARTGNYYKPYDYWGQGTLVTVSS


 


SEQ ID: 272



(312-19 VH with leader)



ATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGCTGGTGCAGTC


 


TGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAACTTCG


 


TTATCGGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAAGGATCATCCCTATCCTTGATATAGCA


 


AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGTTTACATGGAGCTGAA


 


CAGCCTGAGATCTGAGGACACGGCCGTATACTACTGTGCGAGAACGGGGAATTATTATAAGCCCTATGACTACTGGG


 


GCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 273



(312-19 VK with leader)



MLPSQLIGFLLLWVPASRGEIVLTQSPDFQSVTPKEKVTITCRASQSIGSSLHWYQQKPDQSPKLLIKYASQSFSGV


 


PSRFSGSGSGTDFTLTINSLEAEDAAAYYCHQSSSLPITFGQGTRLEIK


 


SEQ ID: 274



(312-19 VK with leader)



ATGTTGCCATCACAACTCATTGGGTTTCTGCTGCTCTGGGTTCCAGCCTCCAGGGGTGAAATTGTGCTGACTCAGTC


 


TCCAGACTTTCAGTCTGTGACTCCAAAGGAGAAAGTCACCATCACCTGCCGGGCCAGTCAGAGCATTGGTAGTAGCT


 


TACACTGGTACCAGCAGAAACCAGATCAGTCTCCAAAGCTCCTCATCAAGTATGCTTCCCAGTCCTTCTCAGGGGTC


 


CCCTCGAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACCCTCACCATCAATAGCCTGGAAGCTGAAGATGCTGC


 


AGCGTATTACTGTCATCAGAGTAGTAGTTTACCGATCACCTTCGGCCAAGGGACACGACTGGAGATCAAA


 


SEQ ID: 275



(312-19-M1 VH with leader)



MDWTWRFLFVVAAATGVQSQVQLVQSGAEVKKPGSSVKVSCKASGGTFNNFVIGWVRQAPGQGLEWMGRIIPILDIA


 


NYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARTGNYYKPYDYWGQGTLVTVSS


 


SEQ ID: 276



(312-19-M1 VH with leader)



ATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGCTGGTGCAGTC


 


TGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAACTTCG


 


TTATCGGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAAGGATCATCCCTATCCTTGATATAGCA


 


AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAG


 


CAGCCTGAGATCTGAGGACACGGCCGTATACTACTGTGCGAGAACGGGGAATTATTATAAGCCCTATGACTACTGGG


 


GCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 277



(591-33 VH with leader)



MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMSWVRQAPGKGLEWMANIKQDGSET


 


HYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAIGDYWGQGTLVTVSS


 


SEQ ID: 278



(591-33 VH with leader)



ATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGTTGGTGGAGTC


 


TGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTCGCTATT


 


GGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGATGGCCAACATAAAGCAAGATGGAAGTGAGACA


 


CACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGATTGGTGACTACTGGGGCCAGGGAACCCTGGTCACCG


 


TCTCCTCA


 


SEQ ID: 279



(591-33 VK with leader)



MDMRVLAQLLGLLLLCFPGARCDIQMTQSPSSLSASVGDRVTITCRASQDISSWLAWYQQKPEKAPKSLIYAASSLQ


 


SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYKSYPLTFGGGTKVEIK


 


SEQ ID: 280



(591-33 VK with leader)



ATGGACATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGAT


 


GACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGATATTA


 


GCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGCTGCATCCAGTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGA


 


AGATTTTGCAACTTATTACTGCCAACAGTATAAAAGTTACCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGATCA


 


AA


 


SEQ ID: 281



(591-33-M1 VH with leader)



MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMSWVRQAPGKGLEWVANIKQDGSET


 


HYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAIGDYWGQGTLVTVSS


 


SEQ ID: 282



(591-33-M1 VH with leader)



ATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGTTGGTGGAGTC


 


TGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTCGCTATT


 


GGATGAGCTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGACA


 


CACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGATTGGTGACTACTGGGGCCAGGGAACCCTGGTCACCG


 


TCTCCTCA


 


SEQ ID: 283



(114-41 VH with leader)



MDWTWSILFLVAAATGAHSQVQLVQSGAEVKTPGASVKVSCKASGYTFTSFGISWVRQAPGQGLEWMGWISVYNDYT


 


NYAQKFQGRVTMTTDTSTSTAYMELRSLRSDDTAMYYCARKRGGDMDYWGQGTLVTVSS


 


SEQ ID: 284



(114-41 VH with leader)



ATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCAGCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTC


 


TGGAGCTGAAGTGAAGACGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTTTG


 


GTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGTTTACAATGATTACACA


 


AACTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAG


 


GAGCCTGAGATCTGACGACACGGCCATGTATTACTGTGCGAGAAAGAGGGGTGGGGATATGGACTATTGGGGCCAGG


 


GAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 285



(114-41 VK with leader)



MDMMVPAQLLGLLLLWFPGSRCDIQMTQSPSSVSASVGDRVTITCRASQDISSWLAWYQHKPGKAPKLLIYLASSLQ


 


SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPWTFGQGTKVEIK


 


SEQ ID: 286



(114-41 VK with leader)



ATGGACATGATGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGAT


 


GACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGATATTA


 


GCAGCTGGTTAGCCTGGTATCAGCATAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATCTTGCATCCAGTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGA


 


AGATTTTGCAACTTACTATTGTCAACAGGCTAATAGTTTTCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAGATCA


 


AA


 


SEQ ID: 287



(114-41-M1 VH with leader)



MDWTWSILFLVAAPTGAHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTSFGISWVRQAPGQGLEWMGWISVYNDYT


 


NYAQKFQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARKRGGDMDYWGQGTLVTVSS


 


SEQ ID: 288



(114-41-M1 VH with leader)



ATGGACTGGACCTGGAGCATCCTTTTCTTGGTGGCAGCACCAACAGGTGCCCACTCCCAGGTTCAGCTGGTGCAGTC


 


TGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTTTG


 


GTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGTTTACAATGATTACACA


 


AACTATGCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAG


 


GAGCCTGAGATCTGACGACACGGCCGTGTATTACTGTGCGAGAAAGAGGGGTGGGGATATGGACTATTGGGGCCAGG


 


GAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 289



(306-155 VH with leader)



MGSTAILALLLAVLQGVCAEVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDT


 


RYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARQGSGWYGNYFDYWGQGTLVTVSS


 


SEQ ID: 290



(306-155 VH with leader)



ATGGGGTCAACCGCCATCCTCGCCCTCCTCCTGGCTGTTCTCCAAGGAGTCTGTGCCGAGGTGCAGCTGGTGCAGTC


 


TGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAGCTACT


 


GGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACC


 


AGATACAGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAG


 


CAGCCTGAAGGCCTCGGACACCGCCATGTATTACTGTGCGAGACAGGGCAGCGGCTGGTACGGGAACTACTTTGACT


 


ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 291



(306-155 VK with leader)



METPAQLLFLLLLWLPDTTGEIVLTQSPGTLSLSPGERATLSCRASQSFSRGYLAWYQQKPGQAPRLLIYGASSRVT


 


GIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYDSSPYTFGQGTKLEIK


 


SEQ ID: 292



(306-155 VK with leader)



ATGGAAACCCCAGCGCAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTGTGTTGACGCA


 


GTCTCCAGGCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTTTTAGCAGAG


 


GCTACTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGTCACT


 


GGCATCCCAGACAGGTTCAGTGGCAGTGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGACTGGAGCCTGAAGA


 


TTTTGCGGTGTATTACTGTCAGCAGTATGATAGCTCACCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAA


 


SEQ ID: 293



(14-173 VH with leader)



MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSFWMSWVRQAPGKGLEWVANIKHDGSEQ


 


DYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARGGIWFGPWGQGTLVTVSS


 


SEQ ID: 294



(14-173 VH with leader)



ATGGAATTGGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCCAGTGTGAGGTGCAGCTGGTGGAGTC


 


TGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTTTT


 


GGATGAGTTGGGTCCGCCAGGCTCCAGGGAAAGGGCTGGAGTGGGTGGCCAACATAAAGCACGATGGAAGTGAGCAA


 


GACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAA


 


CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGGGGGTATCTGGTTCGGCCCCTGGGGCCAGGGAA


 


CCCTGGTCACCGTCTCCTCA


 


SEQ ID: 295



(14-173 VK with leader)



MDMRVPAQLLGLLLLWLPGARCVIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPEVLIYAVSTLQ


 


SGVPSRFSGSGSGTDFTLTISCLQSEDFATYYCQQYYSFPYTFGQGTKLEIK


 


SEQ ID: 296



(14-173 VK with leader)



ATGGACATGAGGGTGCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGTCATCTGGAT


 


GACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTA


 


GCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGGTCCTGATCTATGCTGTATCCACTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTGCCTGCAGTCTGA


 


AGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCA


 


AA


 


SEQ ID: 297



(14-173-M1 VK with leader)



MDMRVPAQLLGLLLLWLPGARCVIWMTQSPSLLSASTGDRVTISCRMSQGISSYLAWYQQKPGKAPELLIYAVSTLQ


 


SGVPSRFSGSGSGTDFTLTISSLQSEDFATYYCQQYYSFPYTFGQGTKLEIK


 


SEQ ID: 298



(14-173-M1 VK with leader)



ATGGACATGAGGGTGCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGTCATCTGGAT


 


GACCCAGTCTCCATCCTTACTCTCTGCATCTACAGGAGACAGAGTCACCATCAGTTGTCGGATGAGTCAGGGCATTA


 


GCAGTTATTTAGCCTGGTATCAGCAAAAACCAGGGAAAGCCCCTGAGCTCCTGATCTATGCTGTATCCACTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCTCTCTGCAGTCTGA


 


AGATTTTGCAACTTATTACTGTCAACAGTATTATAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCA


 


AA


 


SEQ ID: 299



(303-8 VH with leader)



MDWTWRFLFVVAAATGVQSQVQLVQSGAEVKKPGSSVKVSCKASGGSFSIYVISWVRQAPGQGLEWMGRIIPILGTT


 


NYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARPDSPNHSNTFDYWGQGTLVTVSS


 


SEQ ID: 300



(303-8 VH with leader)



ATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGCTGGTGCAGTC


 


TGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTCCTTCAGCATCTATG


 


TTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTACAACA


 


AACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAG


 


CAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGACCGGACTCCCCGAACCATAGTAATACATTTGACT


 


ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA


 


SEQ ID: 301



(303-8 VK with leader)



MDMRVLAQLLGLLLLCFPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPEKAPKSLIYGASSLQ


 


SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYNSYPYTFGQGTKLEIK


 


SEQ ID: 302



(303-8 VK with leader)



ATGGACATGAGGGTCCTCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGTTTCCCAGGTGCCAGATGTGACATCCAGAT


 


GACCCAGTCTCCATCCTCACTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTA


 


GCAGCTGGTTAGCCTGGTATCAGCAGAAACCAGAGAAAGCCCCTAAGTCCCTGATCTATGGTGCATCCAGTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGA


 


AGATTTTGCAACTTATTACTGCCAACAGTATAATAGTTACCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCA


 


AA


 


SEQ ID: 303



(312-56 VH with leader)



MDWTWRFLFVVAAATGVQSQVQVVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPILGTA


 


KYAQKFQGRVTIIADKSTSTAYMELSSLRSEDTAVYYCARDQDYYGMDVWGQGTTVTVSS


 


SEQ ID: 304



(312-56 VH with leader)



ATGGACTGGACCTGGAGGTTCCTCTTTGTGGTGGCAGCAGCTACAGGTGTCCAGTCCCAGGTCCAGGTGGTGCAGTC


 


TGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTATG


 


CTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATCCTTGGTACAGCA


 


AAGTACGCACAGAAGTTCCAGGGCAGAGTCACGATTATCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAG


 


CAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGAGATCAGGACTACTACGGTATGGACGTCTGGGGCC


 


AAGGGACCACGGTCACCGTCTCCTCA


 


SEQ ID: 305



(312-56 VK with leader)



MDMMVPAQLLGLLLLWFPGSRCDIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQHKPGKAPKLLIYAASSLQ


 


SGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQTNNFPWTFGQGTKVEIK


 


SEQ ID: 306



(312-56 VK with leader)



ATGGACATGATGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTTCCAGATGCGACATCCAGAT


 


GACCCAGTCTCCATCTTCCGTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCGAGTCAGGGTATTA


 


GCAGCTGGTTAGCCTGGTATCAGCATAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATGCTGCATCCAGTTTGCAA


 


AGTGGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGA


 


AGATTTTGCAACTTACTATTGTCAACAGACTAATAATTTCCCGTGGACGTTCGGCCAAGGGACCAAGGTGGAGATCA


 


AA


 


SEQ ID: 307



(hSOD1 aa 40-47)



EGLHGFHV


 


SEQ ID: 308



(hSOD1 aa 40-47)



GAAGGCCTGCATGGATTCCATGTT


 


SEQ ID: 309



(hSOD1 aa 63-71)



HFNPLSRKH


 


SEQ ID: 310



(hSOD1 aa 63-71)



CACTTTAATCCTCTATCCAGAAAACAC


 


SEQ ID: 311



(hSOD1 aa 80-88)



HVGDLGNVT


 


SEQ ID: 312



(hSOD1 aa 80-88)



CATGTTGGAGACTTGGGCAATGTGACT


 


SEQ ID: 313



(hSOD1 aa 42-49)



LHGFHVHE


 


SEQ ID: 314



(hSOD1 aa 42-49)



CTGCATGGATTCCATGTTCATGAG


 


SEQ ID: 315



(hSOD1 aa 107-121)



SGDHCIIGRTLVVHE


 


SEQ ID: 316



(hSOD1 aa 107-121)



TCAGGAGACCATTGCATCATTGGCCGCACACTGGTGGTCCATGAA


 


SEQ ID: 317



(hSOD1)



ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDE


 


ERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ


 


SEQ ID: 318



(hSOD1)



GCGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCCAGTGCAGGGCATCATCAATTTCGAGCAGAAGGAAAGTAA


 


TGGACCAGTGAAGGTGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTCCATGTTCATGAGTTTGGAG


 


ATAATACAGCAGGCTGTACCAGTGCAGGTCCTCACTTTAATCCTCTATCCAGAAAACACGGTGGGCCAAAGGATGAA


 


GAGAGGCATGTTGGAGACTTGGGCAATGTGACTGCTGACAAAGATGGTGTGGCCGATGTGTCTATTGAAGATTCTGT


 


GATCTCGCTCTCAGGAGACCATTGCATCATTGGCCGCACACTGGTGGTCCATGAAAAAGCAGATGACTTGGGCAAAG


 


GTGGAAATGAAGAAAGTACAAAGACGGGAAACGCTGGAAGTCGTTTGGCTTGTGGTGTAATTGGGATCGCCCAA


 


SEQ ID: 319



(b-hSOD1)



GCGACCAAAGCAGTGTGCGTTTTGAAAGGCGATGGCCCTGTGCAAGGCATCATTAACTTCGAACAAAAAGAAAGCAA


 


CGGACCGGTCAAAGTGTGGGGATCAATTAAAGGTTTGACTGAGGGCCTGCATGGATTTCACGTGCATGAATTTGGTG


 


ACAATACCGCCGGTTGTACCTCCGCGGGTCCGCACTTTAACCCTTTGTCCCGTAAACACGGGGGCCCTAAAGACGAA


 


GAACGTCATGTCGGCGACTTAGGCAACGTCACTGCCGATAAAGATGGGGTCGCAGACGTCAGTATTGAGGATTCTGT


 


CATTTCGTTGTCTGGCGATCACTGCATCATTGGTCGCACTCTGGTCGTACACGAAAAAGCGGATGATCTGGGGAAAG


 


GCGGCAATGAAGAGAGCACCAAAACGGGAAATGCTGGCTCACGCCTCGCGTGTGGGGTCATTGGTATTGCCCAG


 


SEQ ID: 320



(b-hSOD1-A)



ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGL


 


SEQ ID: 321



(b-hSOD1-B)



ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDE


 


SEQ ID: 322



(b-hSOD1-C)



ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDE


 


ERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRT


 


SEQ ID: 323



(b-hSOD1-D)



TEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGR


 


TLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ


 


SEQ ID: 324



(b-hSOD1-E)



ERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDGKGGNEESTKTGNAGSRLACGVIGIAQ


 


SEQ ID: 325



(b-hSOD1-F)



LVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ


 


SEQ ID: 326



(b-hSOD1-G)



LTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDE


 


SEQ ID: 327



(b-hSOD1-H)



EERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRT


 


SEQ ID: 328



(b-hSOD1-I)



LTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIG


 


RT


 


SEQ ID: 329



(b-hSOD1-J)



DGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ


 


SEQ ID: 330



(b-hSOD1-K)



SVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ


 


SEQ ID: 331



(hSOD1-G1)



LTEGLHGFHVHEFGD


 


SEQ ID: 332



(hSOD1-G1a)



LTEGLHGFHV


 


SEQ ID: 333



(hSOD1-G1b)



EGLHGFHVHE


 


SEQ ID: 334



(hSOD1-G1c)



LHGFHVHEFG


 


SEQ ID: 335



(hSOD1-G2)



HVHEFGDNTAGCTSA


 


SEQ ID: 336



(hSOD1-G3)



TAGCTSAGPHFNPLS


 


SEQ ID: 337



(hSOD1-G4)



HFNPLSRKHGGPKDE


 


SEQ ID: 338



(hSOD1-G4a)



HFNPLSRKH


 


SEQ ID: 339



(hSOD1-G4b)



PLSRKHGGP


 


SEQ ID: 340



(hSOD1-G4c)



RKHGGPKDE


 


SEQ ID: 341



(hSOD1-H1)



EERHVGDLGNVTADK


 


SEQ ID: 342



(hSOD1-H1a)



EERHVGDLG


 


SEQ ID: 343



(hSOD1-H1b)



HVGDLGNVT


 


SEQ ID: 344



(hSOD1-H1c)



DLGNVTADK


 


SEQ ID: 345



(hSOD1-H2)



GNVTADKDGVADVS


 


SEQ ID: 346



(hSOD1-H3)



GVADVSIEDSVISLS


 


SEQ ID: 347



(hSOD1-H4)



SVISLSGDHCIIGRT


 


SEQ ID: 348



(hSOD1-K1)



SGDHCIIGRTLVVHE


 


SEQ ID: 349



(hSOD1-K2)



IIGRTLVVHEKADDL


 


SEQ ID: 350



(osteonectin leader)



MRAWIFFLLCLAGRALA


 


SEQ ID: 351



(osteonectin leader)



ATGAGGGCTTGGATCTTCTTTCTGCTCTGCCTGGCCGGGCGCGCCTTGGCC


 


SEQ ID: 352



(serum albumin peptide)



DICLPRWGCLW

## Claims

1. An isolated monoclonal antibody, or antigen binding fragment thereof, wherein said monoclonal antibody, or antigen binding fragment thereof, binds to an epitope of SOD1 protein and wherein said monoclonal antibody comprises a heavy chain variable domain and a light chain variable domain, wherein the heavy chain variable domain comprises a CDRH1, CDRH2, and CDRH3, wherein:
(a) the CDRH1 comprises an amino acid sequence of SEQ ID NO:21;
(b) the CDRH2 comprises an amino acid sequence of SEQ ID NO:23; and
(c) the CDRH3 comprises an amino acid sequence of SEQ ID NO:25; and

wherein the light chain variable domain comprises a CDRL1, CDRL2, and CDRL3, wherein:
(d) the CDRL1 comprises an amino acid sequence of SEQ ID NO: 29;
(e) the CDRL2 comprises an amino acid sequence of SEQ ID NO: 31; and
(f) the CDRL3 comprises an amino acid sequence of SEQ ID NO: 33.

2. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the monoclonal antibody, or antigen binding fragment thereof, comprises a heavy chain variable domain amino acid sequence of SEQ ID NO:19 and a light chain variable domain amino acid sequence of SEQ ID NO: 27.

3. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the antibody specifically binds to a conformational epitope of SOD1 protein.

4. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 3, wherein the conformational epitope is present in a misfolded SOD1 protein.

5. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the monoclonal antibody, or antigen binding fragment thereof, competes with the binding of antibody 591-37 to the SOD1 protein.

6. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the monoclonal antibody, or antigen binding fragment thereof, binds to SOD1 with a Kd value of 50 nM or lower.

7. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the monoclonal antibody, or antigen binding fragment thereof, is a chimeric, humanized, or fully human antibody, or fragment thereof.

8. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the monoclonal antibody, or antigen binding fragment thereof, is a single chain antibody; a diabody; an Fab, Fab′, F(ab′)2, Fv, scFv, dsFv, or ds-scFv, fragment; an antibody dimer; a bispecific antibody; a minibody; or multimers thereof.

9. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1, wherein the monoclonal antibody, or antigen binding fragment thereof, is conjugated to an exogenous molecule.

10. The isolated monoclonal antibody, or antigen binding fragment thereof, of claim 9, wherein the exogenous molecule is an inhibitory nucleic acid molecule.

11. A composition comprising the monoclonal antibody, or antigen binding fragment thereof, of claim 1 and a pharmaceutically acceptable carrier.

12. An isolated nucleic acid molecule encoding the isolated monoclonal antibody, or antigen binding fragment thereof, of claim 1.

13. A vector comprising the isolated nucleic acid molecule of claim 12.

14. A host cell transformed with the vector of claim 13.

15. A method of producing an antibody, said method comprising culturing the host cell of claim 14 under conditions for expression of the nucleic acid molecule and recovering the antibody from the host cell culture medium.

16. A hybridoma cell line producing the monoclonal antibody of claim 1.

17. A method of treating amyotrophic lateral sclerosis (ALS) in a subject, said method comprising administering intrathecally to the subject an isolated monoclonal antibody or antigen-binding fragment thereof, of claim 1, for a time and in an amount effective to treat said amyotrophic lateral sclerosis.

18. The method of claim 17, wherein the ALS is sporadic ALS.

19. The method of claim 17, wherein the ALS is familial ALS.

20. The method of claim 17, wherein said administering of said isolated monoclonal antibody or antigen binding fragment thereof is in an amount effective to reduce or ameliorate at least one symptom of ALS.

21. The method of claim 20, wherein said at least one symptom is selected from the group consisting of muscle weakness, muscle atrophy, difficulty swallowing, muscle cramping or stiffness, weight loss, and slurred speech.

22. The method of claim 17, wherein said subject is a human subject.

23. The method of claim 17, wherein the method further comprises administering at least one additional therapeutic agent.

24. The method of claim 23, wherein the at least one additional therapeutic agent is riluzole.

25. The method of claim 23, wherein the at least one additional therapeutic agent is a therapeutic antibody or an antibody conjugated to an exogenous molecule.