# Patent

## Title
Quinolinone-carboxamide compounds

## Abstract

The invention provides novel quinolinone-carboxamide 5-HT4 receptor agonist compounds. The invention also provides pharmaceutical compositions comprising such compounds, methods of using such compounds to treat diseases associated with 5-HT4 receptor activity, and processes and intermediates useful for preparing such compounds.

## Background
CROSS-REFERENCE TO RELATED APPLICATIONS
This application is a divisional application of U.S. application Ser. No. 11/267,720, filed Nov. 4, 2005 now U.S. Pat. No. 7,396,933, which application claims the benefit of U.S. Provisional Application No. 60/625,233, filed on Nov. 5, 2004, the entire disclosures of which are incorporated herein by reference in their entirety.


BACKGROUND OF THE INVENTION
1. Field of the Invention
The invention is directed to quinolinone-carboxamide compounds which are useful as 5-HT4 receptor agonists. The invention is also directed to pharmaceutical compositions comprising such compounds, methods of using such compounds for treating medical conditions mediated by 5-HT4 receptor activity, and processes and intermediates useful for preparing such compounds.
2. State of the Art
Serotonin (5-hydroxytryptamine, 5-HT) is a neurotransmitter that is widely distributed throughout the body, both in the central nervous system and in peripheral systems. At least seven subtypes of serotonin receptors have been identified and the interaction of serotonin with these different receptors is linked to a wide variety of physiological functions. There has been, therefore, substantial interest in developing therapeutic agents that target specific 5-HT receptor subtypes.
In particular, characterization of 5-HT4 receptors and identification of pharmaceutical agents that interact with them has been the focus of significant recent activity. (See, for example, the review by Langlois and Fischmeister, J. Med. Chem. 2003, 46, 319-344.) 5-HT4 receptor agonists are useful for the treatment of disorders of reduced motility of the gastrointestinal tract. Such disorders include irritable bowel syndrome (IBS), chronic constipation, functional dyspepsia, delayed gastric emptying, gastroesophageal reflux disease (GERD), gastroparesis, post-operative ileus, intestinal pseudo-obstruction, and drug-induced delayed transit. In addition, it has been suggested that some 5-HT4 receptor agonist compounds may be used in the treatment of central nervous system disorders including cognitive disorders, behavioral disorders, mood disorders, and disorders of control of autonomic function.
Despite the broad utility of pharmaceutical agents modulating 5-HT4 receptor activity, few 5-HT4 receptor agonist compounds are in clinical use at present. Accordingly, there is a need for new 5-HT4 receptor agonists that achieve their desired effects with minimal side effects. Preferred agents may possess, among other properties, improved selectivity, potency, pharmacokinetic properties, and/or duration of action.
SUMMARY OF THE INVENTION
The invention provides novel compounds that possess 5-HT4 receptor agonist activity. Among other properties, compounds of the invention have been found to be potent and selective 5-HT4 receptor agonists.
Accordingly, the invention provides a compound of formula (I):




wherein:

R1 is hydrogen, halo, hydroxy, C1-4alkyl, or C1-4alkoxy;
R2 is C3-4alkyl or C3-6cycloalkyl;
R3 is hydroxy, C1-3alkoxy, hydroxy-substituted C1-4alkyl, or —OC(O)NRaRb;
R4 is hydrogen or C1-4alkyl;
X is selected from —N(R8)C(O)R9, —N(R8)S(O)2R10, —S(R11)O2, —N(R8)C(O)OR12, —N(R8)C(O)NR13R14, —N(R8)SO2NR13R14, —C(O)NR13R14, —OC(O)NR13R14, —C(O)OR12, —OR15, —NR8R16, cyano, —SR15, CF3, pyridinyl, pyrrolyl, thiomorpholinyl, thiazolidinyl, 1,1-dioxoisothiazolidinyl, imidazolyl, indolyl, tetrahydrofuranyl, pyrrolidinyl and piperidinyl, wherein pyrrolidinyl is optionally substituted with oxo and piperidinyl is optionally substituted with 1 to 3 halo;
R5 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy, C1-3alkoxy, or cyano;
R6 and R7 are independently selected from hydrogen, hydroxy, halo, and C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy or C1-3alkoxy;
R8 is hydrogen or C1-4alkyl;
or R5 and R8, R5 and R8, or R6 and R8 taken together form C2-5alkylenyl, wherein C2-5alkylenyl is optionally substituted with hydroxy, halo, hydroxy-substituted C1-3alkyl, or C1-3alkoxy;
or R3 and R5 taken together form —OCH2CH2—;
or R5 and R6 taken together form —(CH2)q-Q-(CH2)q, wherein Q is oxygen or sulfur and q is independently 0, 1, or 2;
R9 is hydrogen, furanyl, or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy or with from 1 to 3 halo;
R10 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with —SO2Rc, C3-6cycloalkyl or with from 1 to 3 halo;
or R8 and R10 taken together form C3alkylenyl;
R11 is hydrogen, C1-4alkyl, or —NRbRc;
or R5 and R11 or R6 and R11 taken together form C2-5alkylenyl;
R12, R13, and R14 are independently hydrogen or C1-4alkyl;
R15 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy;
or R5 and R15 taken together form C1-4alkylenyl;
R16 is —(CH2)r—R17, wherein r is 0, 1, 2, or 3;
R17 is selected from hydrogen, hydroxy, C1-3alkyl, C1-3alkoxy, —C(O)NRaRb, —C(O)-morpholinyl, pyridinyl, pyrrolyl, morpholinyl, and tetrahydrofuranyl, wherein C1-3alkoxy is optionally substituted with hydroxy;
Ra, Rb, and Rc are independently hydrogen or C1-3alkyl; and
n is 1, 2, 3, or 4;
provided that when n is 1, X forms a carbon-carbon bond with the carbon atom bearing the substituents R6 and R7;
or a pharmaceutically-acceptable salt or solvate or stereoisomer thereof.
The invention also provides a pharmaceutical composition comprising a therapeutically effective amount of a compound of the invention and a pharmaceutically-acceptable carrier.
The invention also provides a method of treating a disease or condition associated with 5-HT4 receptor activity, e.g. a disorder of reduced motility of the gastrointestinal tract, the method comprising administering to the mammal, a therapeutically effective amount of a pharmaceutical composition comprising a pharmaceutically-acceptable carrier and a compound of the invention.
Further, the invention provides a method of treating a disease or condition associated with 5-HT4 receptor activity in a mammal, the method comprising administering to the mammal, a therapeutically effective amount of a pharmaceutical composition of the invention.
The compounds of the invention can also be used as research tools, i.e. to study biological systems or samples, or for studying the activity of other chemical compounds. Accordingly, in another of its method aspects, the invention provides a method of using a compound of formula (I), or a pharmaceutically acceptable salt or solvate or stereoisomer thereof, as a research tool for studying a biological system or sample or for discovering new 5-HT4 receptor agonists, the method comprising contacting a biological system or sample with a compound of the invention and determining the effects caused by the compound on the biological system or sample.
In separate and distinct aspects, the invention also provides synthetic processes and intermediates described herein, which are useful for preparing compounds of the invention.
The invention also provides a compound of the invention as described herein for use in medical therapy, as well as the use of a compound of the invention in the manufacture of a formulation or medicament for treating a disease or condition associated with 5-HT4 receptor activity, e.g. a disorder of reduced motility of the gastrointestinal tract, in a mammal.


DETAILED DESCRIPTION OF THE INVENTION
The invention provides novel quinolinone-carboxamide 5-HT4 receptor agonists of formula (I), or pharmaceutically-acceptable salts or solvates or stereoisomers thereof. The following substituents and values are intended to provide representative examples of various aspects of this invention. These representative values are intended to further define such aspects and are not intended to exclude other values or limit the scope of the invention.
In a specific aspect of the invention, R1 is hydrogen, halo, or C1-4alkyl.
In another specific aspect, R1 is hydrogen, halo, or C1-3alkyl.
In other specific aspects, R1 is hydrogen, fluoro, chloro, bromo, or methyl; or R1 is hydrogen.
In a specific aspect, R2 is C3-4alkyl.
Representative R2 groups include n-propyl, isopropyl, n-butyl, sec-butyl, and tert-butyl.
In another specific aspect, R2 is isopropyl.
In a specific aspect, R3 is hydroxy, C1-3alkoxy, hydroxy-substituted C1-2alkyl or —OC(O)NRaRb. Representative R3 groups include, but are not limited to, hydroxy, methoxy, hydroxymethyl, 2-hydroxyethyl, and —OC(O)NRaRb, wherein Ra and Rb are independently hydrogen or methyl.
In other specific aspects, R3 is hydroxy, methoxy, hydroxymethyl, —OC(O)NHCH3, or —OC(O)N(CH3)2; R3 is hydroxy or —OC(O)NHCH3; or R3 is hydroxy.
In specific aspects, R4 is hydrogen or methyl; or R4 is hydrogen.
In a specific aspect, R5 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy, C1-3alkoxy, or cyano.
In another specific aspect, R5 is hydrogen, C1-3alkyl, or C1-3alkyl substituted at the terminal position with hydroxy, C1-3alkoxy, or cyano. Representative R5 groups include, but are not limited to, hydrogen, methyl, ethyl, 2-hydroxyethyl, 2-methoxyethyl, cyanomethyl, and 2-cyanoethyl.
In another specific aspect, R5 is hydrogen, C1-3alkyl, or C1-3alkyl substituted at the terminal position with hydroxy.
In a specific aspect, R6 and R7 are independently selected from hydrogen, hydroxy, halo, and C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy or C1-3alkoxy.
In another specific aspect, R6 and R7 are independently hydrogen, hydroxy, halo, C1-2alkyl, or hydroxy-substituted C1-2alkyl. Representative R6 and R7 groups include, but are not limited to, hydrogen, hydroxy, fluoro, chloro, hydroxyethyl, and hydroxymethyl.
In another specific aspect, R6 and R7 are each hydrogen.
In a specific aspect, R3 and R5 taken together form —OCH2CH2—.
In a specific aspect, n is 2 or 3 and R5 and R6 taken together form —CH2CH2O— or —CH2CH2OCH2—.
In other specific aspects, n is 2 and R5 and R6 taken together form C2-3alkylenyl or C2alkylenyl.
In a specific aspect, X is selected from —N(R8)C(O)R9, —N(R8)S(O)2R10, —S(R11)O2, —N(R8)C(O)OR12, —N(R8)C(O)NR13R14, —N(R8)SO2NR13R14, —C(O)NR13R14, —OC(O)NR13R14, —C(O)OR12, —OR15, and cyano.
In another specific aspect, X is selected from —N(R8)C(O)R9; —N(R8)S(O)2R10, —S(R11)O2, —N(R8)C(O)NR13R14, —C(O)NR13R14, —OC(O)NR13R14, —OR15, and cyano.
In yet another specific aspect, X is selected from —N(R8)C(O)R9, —N(R8)S(O)2R10, —S(R11)O2, and —N(R8)C(O)NR13R14. In still another specific aspect, X is —N(R8)S(O)2R10.
In specific aspects, R8 is hydrogen or C1-4alkyl; R8 is hydrogen or C1-3alkyl; or R8 is hydrogen or methyl.
In a specific aspect, n is 2 and R5 and R8 taken together form C2alkylenyl.
In another specific aspect, n is 2 and R5 and R8 taken together form C3alkylenyl.
In a specific aspect, n is 2 and R6 and R8 taken together form C2-3alkylenyl.
In a specific aspect, R9 is hydrogen, furanyl, or C1-3alkyl, wherein C1-3alkyl is optionally substituted with hydroxy. Representative R9 groups include, but are not limited to, hydrogen, furanyl, methyl, ethyl, propyl, isopropyl, and 1-hydroxyethyl.
In other specific aspects, R9 is hydrogen or C1-3alkyl; or R9 is hydrogen or methyl.
In a specific aspect, R10 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with —SO2Rc, C3-6cycloalkyl or with from 1 to 3 halo.
In another specific aspect, R10 is hydrogen or C1-3alkyl, wherein C1-3alkyl is optionally substituted with —SO2Rc wherein Rc is C1-3alkyl. Representative R10 groups include, but are not limited to, hydrogen, methyl, ethyl, propyl, isopropyl, and methanesulfonylmethyl.
In other specific aspects, R10 is hydrogen, C1-3alkyl, or methanesulfonylmethyl; or R10 is methyl, isopropyl, or methanesulfonylmethyl; or R10 is methyl.
In specific aspects, R11 is hydrogen, C1-4alkyl, or —NRbRc; R11 is hydrogen or C1-3alkyl; or R11 is methyl.
In another specific aspect, n is 2 and R5 and R11 taken together form C2alkylenyl.
In yet another specific aspect, n is 2 or 3 and R6 and R11 taken together form C2alkylenyl.
In specific aspects, R12, R13, and R14 are independently hydrogen or C1-3alkyl, or R12, R13, and R14 are independently hydrogen or methyl.
In a specific aspect, R15 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy.
In other specific aspects, R15 is hydrogen, C1-3alkyl, or C1-3alkyl substituted at the terminal position with hydroxy; or R15 is hydrogen or C1-3alkyl. Representative R15 groups include, but are not limited to, hydrogen, methyl, ethyl, and 2-hydroxyethyl.
In another specific aspect, R15 is hydrogen or methyl.
In a specific aspect, R16 is —(CH2)r—R17, wherein r is 0, 1, or 2 and R17 is selected from hydroxy, C1-2alkoxy, —C(O)NRaRb, —C(O)-morpholinyl, pyridinyl, morpholinyl, and tetrahydrofuranyl, wherein C1-2alkoxy is optionally substituted at the terminal position with hydroxy and Ra and Rb are independently hydrogen or methyl.
In a specific aspect, n is 1, 2, or 3.
In another specific aspect, n is 2, 3, or 4.
In another specific aspect, n is 2 or 3.
In yet another specific aspect, n is 2
In one aspect, the invention provides a compound of formula (III):




wherein:

R1 is hydrogen, halo, or C1-3alkyl;
R2 is C3-4alkyl;
R3 is hydroxy, C1-3alkoxy, hydroxy-substituted C1-2alkyl, or —OC(O)NRaRb;
R5 is hydrogen, C1-3alkyl, or C1-3alkyl substituted at the terminal position with hydroxy or cyano;
R6 is hydrogen;
X is selected from —N(R8)C(O)R9; —N(R8)S(O)2R10, —S(R11)O2, —N(R8)C(O)NR13R14, —C(O)NR13R14, —OC(O)NR13R14, —OR15, and cyano;
R8 is hydrogen or C1-3alkyl;
R9 is hydrogen or C1-3alkyl;
R10 is hydrogen or C1-3alkyl, wherein C1-3alkyl is optionally substituted with —SO2Rc wherein Rc is C1-3alkyl;
R13, R14, and R15 are independently hydrogen or C1-3alkyl;
or R5 and R8, R5 and R6, or R5 and R11 taken together form C2alkylenyl; or
a pharmaceutically-acceptable salt or solvate or stereoisomer thereof.
In another aspect, the invention provides a compound of formula (II) wherein:
R1 is hydrogen;
R2 is C3-4alkyl;
R3 is hydroxy, methoxy, hydroxymethyl, —OC(O)N(H)CH3, or —OC(O)N(CH3)2;
R6 is hydrogen;
X is selected from —N(R8)C(O)R9; —N(R8)S(O)2R10, —S(R11)O2, and —N(R8)C(O)NR13R14;
R5 and R8 taken together form C2alkylenyl;
R9 is hydrogen or C1-3alkyl;
R10 is hydrogen, C1-3alkyl, or methanesulfonylmethyl;
R5 and R11 taken together form C2alkylenyl; and
R13 and R14 are independently hydrogen or C1-3alkyl.
In separate aspects, the invention further provides compounds of formula (III):




wherein R1, R2, R3, and R9 take any of the values defined above;

compounds of formula (IV):





wherein R1, R2, R3, and R10 take any of the values defined above;

and compounds of formula (V):





wherein R1, R2, and R3 take any of the values defined above.

In still other specific aspects, the invention provides the compounds listed in Tables I to XXVIII below.
The chemical naming conventions used herein are illustrated for the compound of Example 1




which is designated 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}-amide, according to the AutoNom software, provided by MDL Information Systems, GmbH (Frankfurt, Germany). The designation (1S,3R,5R) describes the relative orientation of the bonds associated with the bicyclic ring system that are depicted as solid and dashed wedges. The compound is alternatively denoted as N-[(3-endo)-8-[2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl]-1-(1-methylethyl)-2-oxo-1,2-dihydro-3-quinolinecarboxamide. In all of the compounds of the invention listed explicitly below, the quinolinone-carboxamide group is endo to the azabicyclooctane group.

Particular mention may be made of the following compounds:

    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid ((1S,3R,5R)-8-{2-hydroxy-3-[4-(propane-2-sulfonyl)piperazin-1-yl]propyl}-8-azabicyclo[3.2.1]oct-3-yl)-amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(1,1-dioxo-1λ6-thiomorpholin-4-yl)-2-hydroxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(S)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(R)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(4-methanesulfonylmethanesulfonylpiperazin-1-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]-oct-3-yl}amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(4-acetylpiperazin-1-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(1,1-dioxo-1λ6-thiomorpholin-4-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
    methylcarbamic acid 2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}-1-(4-methanesulfonylpiperazin-1-ylmethyl)ethyl ester;
    methylcarbamic acid 1-(4-dimethylcarbamoylpiperazin-1-ylmethyl)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}ethyl ester;
    methylcarbamic acid 1-[3-(acetylmethylamino)pyrrolidin-1-ylmethyl]-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}ethyl ester;
    methylcarbamic acid 1-(4-acetylpiperazin-1-ylmethyl)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}-ethyl ester,
    methylcarbamic acid (R)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}-1-(4-methanesulfonyl-piperazin-1-ylmethyl)ethyl ester; and
    1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-hydroxy-2-(4-methanesulfonylpiperazin-1-ylmethyl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}-amide.


As exemplified by particular compounds listed above, the compounds of the invention may contain one or more chiral centers, in particular, the compounds may contain a chiral center at the carbon atom in formulas (I) to (IV) bearing the substituent R3. Accordingly, the invention includes racemic mixtures, pure stereoisomers, and stereoisomer-enriched mixtures of such isomers, unless otherwise indicated. When a particular stereoisomer is shown, it will be understood by those skilled in the art, that minor amounts of other stereoisomers may be present in the compositions of the invention unless otherwise indicated, provided that any utility of the composition as a whole is not eliminated by the presence of such other isomers.
Definitions
When describing the compounds, compositions and methods of the invention, the following terms have the following meanings, unless otherwise indicated.
The term “alkyl” means a monovalent saturated hydrocarbon group which may be linear or branched or combinations thereof. Unless otherwise defined, such alkyl groups typically contain from 1 to 10 carbon atoms. Representative alkyl groups include, by way of example, methyl, ethyl, n-propyl (n-Pr), isopropyl (i-Pr), n-butyl (n-Bu), sec-butyl, isobutyl, tert-butyl, n-pentyl, n-hexyl, n-heptyl, n-octyl, n-nonyl, n-decyl and the like.
The term “alkylenyl” means a divalent saturated hydrocarbon group which may be linear or branched or combinations thereof. Unless otherwise defined, such alkylenyl groups typically contain from 1 to 10 carbon atoms. Representative alkylenyl groups include, by way of example, methylene, ethylene, n-propylene, n-butylene, propane-1,2-diyl (1-methylethylene), 2-methylpropane-1,2-diyl (1,1-dimethylethylene) and the like.
The term “alkoxy” means the monovalent group -O-alkyl, where alkyl is defined as above. Representative alkoxy groups include, by way of example, methoxy, ethoxy, propoxy, butoxy, and the like.
The term “cycloalkyl” means a monovalent saturated carbocyclic group which may be monocyclic or multicyclic. Unless otherwise defined, such cycloalkyl groups typically contain from 3 to 10 carbon atoms. Representative cycloalkyl groups include, by way of example, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, and the like.
The term “halo” means fluoro, chloro, bromo or iodo.
The term “compound” means a compound that was synthetically prepared or prepared in any other way, such as by metabolism.
The term “therapeutically effective amount” refers to an amount sufficient to effect treatment when administered to a patient in need of treatment.
The term “treatment” as used herein refers to the treatment of a disease, disorder, or medical condition in a patient, such as a mammal (particularly a human) which includes:

    
    
        (a) preventing the disease, disorder, or medical condition from occurring, i.e., prophylactic treatment of a patient;
        (b) ameliorating the disease, disorder, or medical condition, i.e., eliminating or causing regression of the disease, disorder, or medical condition in a patient;
        (c) suppressing the disease, disorder, or medical condition, i.e., slowing or arresting the development of the disease, disorder, or medical condition in a patient; or
        (d) alleviating the symptoms of the disease, disorder, or medical condition in a patient.
    
    


The term “pharmaceutically-acceptable salt” refers to a salt prepared from an acid or base which is acceptable for administration to a patient, such as a mammal. Such salts can be derived from pharmaceutically-acceptable inorganic or organic acids and from pharmaceutically-acceptable bases. Typically, pharmaceutically-acceptable salts of compounds of the present invention are prepared from acids.
Salts derived from pharmaceutically-acceptable acids include, but are not limited to, acetic, benzenesulfonic, benzoic, camphorsulfonic, citric, ethanesulfonic, fumaric, gluconic, glutamic, hydrobromic, hydrochloric, lactic, maleic, malic, mandelic, methanesulfonic, mucic, nitric, pantothenic, phosphoric, succinic, sulfuric, tartaric, p-toluenesulfonic, xinafoic (1-hydroxy-2-naphthoic acid), napthalene-1,5-disulfonic acid and the like.
The term “solvate” means a complex or aggregate formed by one or more molecules of a solute, i.e. a compound of the invention or a pharmaceutically-acceptable salt thereof, and one or more molecules of a solvent. Such solvates are typically crystalline solids having a substantially fixed molar ratio of solute and solvent. Representative solvents include by way of example, water, methanol, ethanol, isopropanol, acetic acid, and the like. When the solvent is water, the solvate formed is a hydrate.
It will be appreciated that the term “or a pharmaceutically-acceptable salt or solvate of stereoisomer thereof” is intended to include all permutations of salts, solvates and stereoisomers, such as a solvate of a pharmaceutically-acceptable salt of a stereoisomer of a compound of formula (I).
The term “amino-protecting group” means a protecting group suitable for preventing undesired reactions at an amino nitrogen. Representative amino-protecting groups include, but are not limited to, formyl; acyl groups, for example alkanoyl groups, such as acetyl; alkoxycarbonyl groups, such as tert-butoxycarbonyl (Boc); arylmethoxycarbonyl groups, such as benzyloxycarbonyl (Cbz) and 9-fluorenylmethoxycarbonyl (Fmoc); arylmethyl groups, such as benzyl (Bn), trityl (Tr), and 1,1-di-(4′-methoxyphenyl)methyl; silyl groups, such as trimethylsilyl (TMS) and tert-butyldimethylsilyl (TBDMS); and the like.
General Synthetic Procedures
Compounds of the invention can be prepared from readily available starting materials using the following general methods and procedures. Although a particular aspect of the present invention is illustrated in the schemes below, those skilled in the art will recognize that all aspects of the present invention can be prepared using the methods described herein or by using other methods, reagents and starting materials known to those skilled in the art. It will also be appreciated that where typical or preferred process conditions (i.e., reaction temperatures, times, mole ratios of reactants, solvents, pressures, etc.) are given, other process conditions can also be used unless otherwise stated. Optimum reaction conditions may vary with the particular reactants or solvent used, but such conditions can be determined by one skilled in the art by routine optimization procedures.
Additionally, as will be apparent to those skilled in the art, conventional protecting groups may be necessary to prevent certain functional groups from undergoing undesired reactions. The choice of a suitable protecting group for a particular functional group, as well as suitable conditions for protection and deprotection, are well known in the art. For example, numerous protecting groups, and their introduction and removal, are described in T. W. Greene and G. M. Wuts, Protecting Groups in Organic Synthesis, Third Edition, Wiley, New York, 1999, and references cited therein.
In one method of synthesis, compounds of formula (I) in which R3 is defined as hydroxy or hydroxy-substituted C1-4alkyl are prepared as illustrated in Scheme A. (The substituents and variables shown in the following schemes have the definitions provided herein unless otherwise indicated).




In Scheme A, intermediate 2 is a secondary amine, and L represents a leaving group such as chloro, bromo, iodo, methanesulfonyl, p-toluenesulfonyl, or trifluoromethanesulfonyl.

For convenience, the moiety:




is represented by Y.

The reaction is typically conducted by contacting intermediate 1 with between about 1 and about 3 equivalents, each, of intermediates 2 and 3 in an inert diluent, such as methanol or ethanol, in the presence of an excess of base, for example between about 3 and about 6 equivalents, of base, such as N,N-diisopropylethylamine. The reaction is typically conducted at a temperature in the range of about 50° C. to about 80° C. for about 12 hours to about 24 hours, or until the reaction is substantially complete. Optionally, equal molar equivalents of intermediates 2 and 3 can be added in portions, as described in Example 1, below.
The product of formula (I) is isolated and purified by conventional procedures. For example, the product can be concentrated to dryness under reduced pressure, taken up in an aqueous weak acid solution and purified by HPLC chromatography.
It will be understood that in the process of Scheme A and in other processes described below using intermediate 1, intermediate 1 can be supplied in the form of the freebase or in a salt form, with appropriate adjustment of reaction conditions, as necessary, as known to those skilled in the art.
In Scheme A, the reaction of intermediate 1 with intermediates 2 and 3 is accomplished in a single step. Alternatively, the reaction can be performed in a stepwise manner. Using similar reaction conditions to those described above, intermediates 1 and 3 can first be coupled to form an intermediate 5:




which is then reacted with the amine H—Y to provide a compound of formula (I). Alternatively, the amine can first be coupled to intermediate 3 to form an intermediate 10:





which is subsequently reacted with the quinolinone carboxamide-tropane intermediate 1.

Compounds of formula (I) can also be prepared by N-alkylating a compound of the form of formula (I) in which R2 is defined as hydrogen, which can be prepared according to Scheme A. The N-alkylation reaction is typically conducted by contacting a compound of formula (I) in which R2 is hydrogen with between about 1 and about 4 equivalents of a compound of the formula L′-R2 in which L′ is a leaving group such as iodo or bromo. This reaction is typically conducted in a polar aprotic solvent such as dimethylformamide in the presence of between about 2 and about 4 equivalents of strong base, such as potassium tert-butoxide or sodium hydride. Typically, the reaction is performed at a temperature of between about 60° C. and about 100° C. for between about 6 and about 24 hours, or until the reaction is substantially complete.
In yet another alternative, compounds of formula (I) in which R1 is other than hydrogen are prepared by conventional processes from compounds of formula (I) in which R1 is hydrogen.
In another method of synthesis, compounds of formula (I) in which R3 is hydroxy, C1-3alkoxy, or —OC(O)NRaRb and the carbon atom bearing the substituent R3 is not chiral can be prepared from an azetidine intermediate 11, as illustrated in Scheme B:




where L′ is a halo anion, such as Cl− or Br−.

The reaction is typically conducted by contacting intermediate 11 with between about 1 and about 4 equivalents of intermediate 2 in an inert diluent, such as ethanol, methanol, or dimethylformamide, in the presence of an excess of base, for example between about 2 and about 4 equivalents, of base, such as N,N-diisopropylethylamine, 1,8-diazabicylco[5.4.0]undec-7-ene (DBU) or triethylamine. The reaction is typically conducted at a temperature in the range of about 50° C. to about 80° C. for about 1 hour to about 6 hours, or until the reaction is substantially complete. The product is isolated and purified by conventional means.
In yet another method of synthesis, compounds of formula (I) in which R3 is hydroxy can be prepared as illustrated in Scheme C.




When an intermediate of formula 12 in which the carbon indicated by an asterisk is chiral is employed, the reaction of Scheme C is useful to prepare compounds of formula (I) having a chiral center at the carbon bearing the substituent R3. Typically, in the reaction of Scheme C, intermediate 1 is contacted with between about 1 and about 1.2 equivalents of the epoxide 12 in an inert diluent such as ethanol or toluene. The reaction is typically conducted at temperature in the range of about 50° C. to about 100° C. for about 12 hours to about 24 hours, or until the reaction is substantially complete. The product is isolated and purified by conventional means.

The intermediates employed in Schemes A, B, and C above are prepared from readily available starting materials. For example, when R3 is hydroxy, an azetidine intermediate of formula 13 is prepared by the procedure illustrated in Scheme D:




where L′ represents a halo leaving group, such as bromo, chloro, or iodo.

An intermediate of formula 1 is reacted with an oxirane compound, preferably 2-bromomethyloxirane (commonly, epibromohydrin) to form the azetidine salt of formula 13. This reaction is typically conducted by contacting 1 with between about 2 and about 4 equivalents of 2-bromomethyloxirane in a polar diluent, such as ethanol. The reaction is typically conducted at ambient temperature for between about 24 and about 48 hours or until the reaction is substantially complete.
To form the azetidine intermediate 11 in which R3 is C1-3alkoxy, the intermediate of formula 13 above is contacted with from slightly less than one equivalent to about one equivalent of a C1-3alkylhalide in an inert diluent in the presence of between about 1 and about 3 equivalents of a strong base, such as potassium tert-butoxide or sodium hydride. The reaction is typically conducted at ambient temperature for between about a quarter hour to an hour, or until the reaction is substantially complete. Suitable inert diluents include dichloromethane, tetrahydrofuran, toluene, dimethylformamide, and the like.
The azetidine intermediate 11 in which R3 is a carbamic acid moiety of the form —OC(O)NRaRb can also be prepared from the intermediate of formula 13 in which R3 is hydroxy. For example, to prepare a compound of formula 11 in which R3 is —OC(O)N(H)CH3 or —OC(O)N(CH3)2, intermediate 13 is contacted with between about 1 and about 3 equivalents of methylisocyanate or dimethylisocyanate, respectively, in an inert diluent in the presence of between about 1 and about 3 equivalents of base, such as N,N-diisopropylethylamine, and of a catalytic amount of a strong base such as potassium tert-butoxide or sodium hydride. The reaction is typically conducted at ambient temperature for between about 4 hours and about 24 hours, or until the reaction is substantially complete.
A process for preparing intermediates of formula 1 is shown in Scheme E:




where P1 represents an amino-protecting group. The protected aminoazabicyclooctane, or commonly, aminotropane 15 is first reacted with the substituted quinolinone carboxylic acid 14. Typically, this reaction is conducted by first converting 14 to an acid chloride by contacting 14 with at least one equivalent, preferably between about 1 and about 2 equivalents of an activating agent, such as thionyl chloride or oxalyl chloride in an aromatic diluent, such as toluene, benzene, xylene, or the like. The reaction is typically conducted at a temperature ranging from about 80° C. to about 120° C. for about 15 minutes to about 4 hours, or until the reaction is substantially complete.

The acid chloride solution is typically added to a biphasic mixture of about 1 equivalent of the aminotropane 15 to form a protected intermediate, which is extracted by standard procedures. The biphasic mixture of 15 is generally prepared by dissolving 15 in an aromatic diluent, such as used above, and adding an aqueous solution containing an excess of base, such as sodium hydroxide or potassium hydroxide, preferably about 2 to 5 equivalents of base.
Alternatively, the amide coupling of intermediate 15 with the carboxylic acid 14 can be performed in the presence of a coupling agent such as 1,3 dicyclohexylcarbodiimide (DCC), 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide (EDC), or benzotriazol-1-yloxytripyrrolidino-phosphonium hexafluorophosphate (PyBop), optionally combined with 1-hydroxy-7-azabenzotriazole (HOAt). In yet another alternative, the amide coupling of intermediate 15 with the carboxylic acid 14 can be performed by converting 14 to an activated ester.
The protecting group P1 is removed by standard procedures to provide an intermediate of formula 1. For example when the protecting group is Boc, typically removal is by treatment with an acid, such as trifluoroacetic acid, providing the acid salt of the intermediate. The acid salt of intermediate 1 can be converted to the free base, if desired, by conventional treatment with base. The protecting group Cbz, for another example, is conveniently removed by hydrogenolysis over a suitable metal catalyst such as palladium on carbon.
The protected aminotropane 15 employed in the reactions described in this application is prepared from readily available starting materials. For example, when the protecting group P1 is Boc, the protected aminotropane 16 is prepared by the procedure illustrated in Scheme F.




As described in detail in Example 1a below, to prepare the protected intermediate 16, first, 2,5-dimethoxy tetrahydrofuran 17 is contacted with between about 1 and 2 equivalents, preferably about 1.5 equivalents of benzyl amine and a slight excess, for example about 1.1 equivalents, of 1,3-acetonedicarboxylic acid 18 in an acidic aqueous solution in the presence of a buffering agent such as sodium hydrogen phosphate. The reaction mixture is heated to between about 60° C. and about 100° C. to ensure decarboxylation of any carboxylated intermediates in the product, 8-benzyl-8-azabicyclo[3.2.1]octan-3-one 19, commonly N-benzyltropanone.
The intermediate 19 is typically reacted with a slight excess of di-tert-butyl dicarbonate (commonly (Boc)2O), for example, about 1.1 equivalents, under a hydrogen atmosphere in the presence of a transition metal catalyst to provide the Boc protected intermediate 20, 3-oxo-8-azabicyclo[3.2.1]octane-8-carboxylic acid tert-butyl ester. The reaction is typically conducted at ambient temperature for about 12 to about 72 hours. Finally, intermediate 20 is contacted with a large excess, for example at least about 25 equivalents, of ammonium formate in an inert diluent, such as methanol, in the presence of a transition metal catalyst to provide the product 16 in the endo configuration, with high stereospecificity, for example endo to exo ratio of >99:1. The reaction is typically conducted at ambient temperature for about 12 to about 72 hours or until the reaction is substantially complete. It is advantageous to add the ammonium formate reagent in portions. For example, intermediate 20 is contacted with an initial portion of ammonium formate of about 15 to about 25 equivalents. After an interval of about 12 to about 36 hours, an additional portion of about 5 to about 10 equivalents of ammonium formate is added. The subsequent addition can be repeated after a similar interval. The product 16 can be purified by conventional procedures, such as alkaline extraction.
The quinolinone carboxylic acid 14 is readily prepared by procedures similar to those reported in the literature in Suzuki et al, Heterocycles, 2000, 53, 2471-2485 and described in the examples below.
The oxirane intermediate 12 used in Scheme C can be prepared by reaction with a halomethyloxirane as shown in Scheme G:




where L is a halo leaving group. This reaction is typically conducted by contacting the amine of formula 2 with between about 1 and about 2 equivalents of a halomethyloxirane in a polar diluent such as ethanol. The reaction is typically conducted at ambient temperature for between about 12 and about 24 hours, or until the reaction is substantially complete. The linear intermediate 21 is typically isolated by conventional procedures as a solid. The solid 21 is typically dissolved in an inert diluent, for example tetrahydrofuran, in the presence of a molar excess of base, for example sodium hydroxide, to produce the cyclized form 12.

The secondary amines H—Y are available commercially or are readily synthesized from common starting materials according to standard protocols described in the literature or in textbooks, such as J. March, Advanced Organic Chemistry, Fourth Edition, Wiley, New York, 1992, and as exemplified below.
In yet another alternative method of synthesis, compounds of formula (D) are prepared by coupling the substituted quinolinone carboxylic acid 14 with an intermediate of formula 22 as illustrated in Scheme H.




The reaction of Scheme H is typically conducted under the amide coupling conditions described above for the reaction of the carboxylic acid 14 with intermediate 15.

Intermediates of formula 22 can be prepared by deprotecting an intermediate of formula 23:




where P2 represents an amino-protecting group.

Intermediates of formula 23 can be prepared from readily available starting materials using procedures analogous to the reactions described above and/or using alternative reactions well known to those skilled in the art. For example, intermediate 23 can be prepared using an intermediate 24




which may be formed by protecting the amino nitrogen of the aminoazobicyclooctane 15 with amino-protecting group P2 and then removing P1 from the nitrogen of the azabicyclooctane group. Protecting groups P1 and P2 are chosen such that they are removed under different conditions. For example when P1 is chosen as Boc, then Cbz can be used as P2. Substituting the protected aminotropane 24 for intermediate 1 in the reactions described in Schemes A, C, and D provides intermediates of formula 23.

Further details regarding specific reaction conditions and other procedures for preparing representative compounds of the invention or intermediates thereto are described in the examples below.
Accordingly, in a method aspect, the invention provides a process for preparing a compound of formula (I), wherein R1, R2, R3, R4, R5, R6, R7, n, and X are defined as in formula (I), or a salt or stereoisomer thereof, the process comprising:
(a) reacting a compound of formula (VI):




wherein L′ is an anion, with a compound of formula (VII):





or

(b) reacting a compound of formula (VIII):




with a compound of formula (IX):





to provide a compound of formula (I), or a salt or stereoisomer thereof.

The invention also provides a process for preparing a compound of formula (I), wherein R3 is hydroxy and R1, R2, R4, R5, R6, R7, n, and X are defined as in formula (I), or a salt or stereoisomer thereof, the process comprising:
step (a) or step (b) as defined above, or
(c) reacting a compound of formula (X):




or a salt thereof, with a compound of formula (VII) and a compound of formula (XI):





wherein L is a leaving group;

or

(d) reacting a compound of formula (X) with a compound of formula (XII):




to provide a compound of formula (I), or a salt or stereoisomer thereof.

In still other aspects, this invention is directed to additional processes described herein; and to the products prepared by any of the processes described herein.
Pharmaceutical Compositions
The quinolinone-carboxamide compounds of the invention are typically administered to a patient in the form of a pharmaceutical composition. Such pharmaceutical compositions may be administered to the patient by any acceptable route of administration including, but not limited to, oral, rectal, vaginal, nasal, inhaled, topical (including transdermal) and parenteral modes of administration.
Accordingly, in one of its compositions aspects, the invention is directed to a pharmaceutical composition comprising a pharmaceutically-acceptable carrier or excipient and a therapeutically effective amount of a compound of formula (I) or a pharmaceutically acceptable salt thereof. Optionally, such pharmaceutical compositions may contain other therapeutic and/or formulating agents if desired.
The pharmaceutical compositions of the invention typically contain a therapeutically effective amount of a compound of the present invention or a pharmaceutically-acceptable salt thereof. Typically, such pharmaceutical compositions will contain from about 0.1 to about 95% by weight of the active agent; preferably, from about 5 to about 70% by weight; and more preferably from about 10 to about 60% by weight of the active agent.
Any conventional carrier or excipient may be used in the pharmaceutical compositions of the invention. The choice of a particular carrier or excipient, or combinations of carriers or excipients, will depend on the mode of administration being used to treat a particular patient or type of medical condition or disease state. In this regard, the preparation of a suitable pharmaceutical composition for a particular mode of administration is well within the scope of those skilled in the pharmaceutical arts. Additionally, the ingredients for such compositions are commercially-available from, for example, Sigma, P.O. Box 14508, St. Louis, Mo. 63178. By way of further illustration, conventional formulation techniques are described in Remington: The Science and Practice of Pharmacy, 20th Edition, Lippincott Williams & White, Baltimore, Md. (2000); and H. C. Ansel et al., Pharmaceutical Dosage Forms and Drug Delivery Systems, 7th Edition, Lippincott Williams & White, Baltimore, Md. (1999).
Representative examples of materials which can serve as pharmaceutically acceptable carriers include, but are not limited to, the following: (1) sugars, such as lactose, glucose and sucrose; (2) starches, such as corn starch and potato starch; (3) cellulose, such as microcrystalline cellulose, and its derivatives, such as sodium carboxymethyl cellulose, ethyl cellulose and cellulose acetate; (4) powdered tragacanth; (5) malt; (6) gelatin; (7) talc; (8) excipients, such as cocoa butter and suppository waxes; (9) oils, such as peanut oil, cottonseed oil, safflower oil, sesame oil, olive oil, corn oil and soybean oil; (10) glycols, such as propylene glycol; (11) polyols, such as glycerin, sorbitol, mannitol and polyethylene glycol; (12) esters, such as ethyl oleate and ethyl laurate; (13) agar; (14) buffering agents, such as magnesium hydroxide and aluminum hydroxide; (15) alginic acid; (16) pyrogen-free water; (17) isotonic saline; (18) Ringer's solution; (19) ethyl alcohol; (20) phosphate buffer solutions; and (21) other non-toxic compatible substances employed in pharmaceutical compositions.
The pharmaceutical compositions of the invention are typically prepared by thoroughly and intimately mixing or blending a compound of the invention with a pharmaceutically-acceptable carrier and one or more optional ingredients. If necessary or desired, the resulting uniformly blended mixture can then be shaped or loaded into tablets, capsules, pills and the like using conventional procedures and equipment.
The pharmaceutical compositions of the invention are preferably packaged in a unit dosage form. The term “unit dosage form” refers to a physically discrete unit suitable for dosing a patient, i.e., each unit containing a predetermined quantity of active agent calculated to produce the desired therapeutic effect either alone or in combination with one or more additional units. For example, such unit dosage forms may be capsules, tablets, pills, and the like.
In a preferred embodiment, the pharmaceutical compositions of the invention are suitable for oral administration. Suitable pharmaceutical compositions for oral administration may be in the form of capsules, tablets, pills, lozenges, cachets, dragees, powders, granules; or as a solution or a suspension in an aqueous or non-aqueous liquid; or as an oil-in-water or water-in-oil liquid emulsion; or as an elixir or syrup; and the like; each containing a predetermined amount of a compound of the present invention as an active ingredient.
When intended for oral administration in a solid dosage form (i.e., as capsules, tablets, pills and the like), the pharmaceutical compositions of the invention will typically comprise a compound of the present invention as the active ingredient and one or more pharmaceutically-acceptable carriers, such as sodium citrate or dicalcium phosphate. Optionally or alternatively, such solid dosage forms may also comprise: (1) fillers or extenders, such as starches, microcrystalline cellulose, lactose, sucrose, glucose, mannitol, and/or silicic acid; (2) binders, such as carboxymethylcellulose, alginates, gelatin, polyvinyl pyrrolidone, sucrose and/or acacia; (3) humectants, such as glycerol; (4) disintegrating agents, such as agar-agar, calcium carbonate, potato or tapioca starch, alginic acid, certain silicates, and/or sodium carbonate; (5) solution retarding agents, such as paraffin; (6) absorption accelerators, such as quaternary ammonium compounds; (7) wetting agents, such as cetyl alcohol and/or glycerol monostearate; (8) absorbents, such as kaolin and/or bentonite clay; (9) lubricants, such as talc, calcium stearate, magnesium stearate, solid polyethylene glycols, sodium lauryl sulfate, and/or mixtures thereof; (10) coloring agents; and (11) buffering agents.
Release agents, wetting agents, coating agents, sweetening, flavoring and perfuming agents, preservatives and antioxidants can also be present in the pharmaceutical compositions of the invention. Examples of pharmaceutically-acceptable antioxidants include: (1) water-soluble antioxidants, such as ascorbic acid, cysteine hydrochloride, sodium bisulfate, sodium metabisulfate sodium sulfite and the like; (2) oil-soluble antioxidants, such as ascorbyl palmitate, butylated hydroxyanisole (BHA), butylated hydroxytoluene (BHT), lecithin, propyl gallate, alpha-tocopherol, and the like; and (3) metal-chelating agents, such as citric acid, ethylenediamine tetraacetic acid (EDTA), sorbitol, tartaric acid, phosphoric acid, and the like. Coating agents for tablets, capsules, pills and like, include those used for enteric coatings, such as cellulose acetate phthalate (CAP), polyvinyl acetate phthalate (PVAP), hydroxypropyl methylcellulose phthalate, methacrylic acid-methacrylic acid ester copolymers, cellulose acetate trimellitate (CAT), carboxymethyl ethyl cellulose (CMEC), hydroxypropyl methyl cellulose acetate succinate (HPMCAS), and the like.
If desired, the pharmaceutical compositions of the present invention may also be formulated to provide slow or controlled release of the active ingredient using, by way of example, hydroxypropyl methyl cellulose in varying proportions; or other polymer matrices, liposomes and/or microspheres.
In addition, the pharmaceutical compositions of the present invention may optionally contain opacifying agents and may be formulated so that they release the active ingredient only, or preferentially, in a certain portion of the gastrointestinal tract, optionally, in a delayed manner. Examples of embedding compositions which can be used include polymeric substances and waxes. The active ingredient can also be in micro-encapsulated form, if appropriate, with one or more of the above-described excipients.
Suitable liquid dosage forms for oral administration include, by way of illustration, pharmaceutically-acceptable emulsions, microemulsions, solutions, suspensions, syrups and elixirs. Such liquid dosage forms typically comprise the active ingredient and an inert diluent, such as, for example, water or other solvents, solubilizing agents and emulsifiers, such as ethyl alcohol, isopropyl alcohol, ethyl carbonate, ethyl acetate, benzyl alcohol, benzyl benzoate, propylene glycol, 1,3-butylene glycol, oils (esp., cottonseed, groundnut, corn, germ, olive, castor and sesame oils), glycerol, tetrahydrofuryl alcohol, polyethylene glycols and fatty acid esters of sorbitan, and mixtures thereof. Suspensions, in addition to the active ingredient, may contain suspending agents such as, for example, ethoxylated isostearyl alcohols, polyoxyethylene sorbitol and sorbitan esters, microcrystalline cellulose, aluminum metahydroxide, bentonite, agar-agar and tragacanth, and mixtures thereof.
Alternatively, the pharmaceutical compositions of the invention are formulated for administration by inhalation. Suitable pharmaceutical compositions for administration by inhalation will typically be in the form of an aerosol or a powder. Such compositions are generally administered using well-known delivery devices, such as a metered-dose inhaler, a dry powder inhaler, a nebulizer or a similar delivery device.
When administered by inhalation using a pressurized container, the pharmaceutical compositions of the invention will typically comprise the active ingredient and a suitable propellant, such as dichlorodifluoromethane, trichlorofluoromethane, dichlorotetrafluoroethane, carbon dioxide or other suitable gas.
Additionally, the pharmaceutical composition may be in the form of a capsule or cartridge (made, for example, from gelatin) comprising a compound of the invention and a powder suitable for use in a powder inhaler. Suitable powder bases include, by way of example, lactose or starch.
The compounds of the invention can also be administered transdermally using known transdermal delivery systems and excipients. For example, a compound of the invention can be admixed with permeation enhancers, such as propylene glycol, polyethylene glycol monolaurate, azacycloalkan-2-ones and the like, and incorporated into a patch or similar delivery system. Additional excipients including gelling agents, emulsifiers and buffers, may be used in such transdermal compositions if desired.
The following formulations illustrate representative pharmaceutical compositions of the present invention:
FORMULATION EXAMPLE A
Hard gelatin capsules for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the invention
50
mg



Lactose (spray-dried)
200
mg



Magnesium stearate
10
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and then loaded into a hard gelatin capsule (260 mg of composition per capsule).
    
    


FORMULATION EXAMPLE B
Hard gelatin capsules for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the invention
20
mg



Starch
89
mg



Microcrystalline cellulose
89
mg



Magnesium stearate
2
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and then passed through a No. 45 mesh U.S. sieve and loaded into a hard gelatin capsule (200 mg of composition per capsule).
    
    


FORMULATION EXAMPLE C
Capsules for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the invention
10
mg



Polyoxyethylene sorbitan monooleate
50
mg



Starch powder
250
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and then loaded into a gelatin capsule (310 mg of composition per capsule).
    
    


FORMULATION EXAMPLE D
Tablets for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the invention
5
mg



Starch
50
mg



Macrocrystalline cellulose
35
mg



Polyvinylpyrrolidone (10 wt. % in water)
4
mg



Sodium carboxymethyl starch
4.5
mg



Magnesium stearate
0.5
mg



Talc
1
mg










    
    
        Representative Procedure: The active ingredient, starch and cellulose are passed through a No. 45 mesh U.S. sieve and mixed thoroughly. The solution of polyvinylpyrrolidone is mixed with the resulting powders, and this mixture is then passed through a No. 14 mesh U.S. sieve. The granules so produced are dried at 50-60° C. and passed through a No. 18 mesh U.S. sieve. The sodium carboxymethyl starch, magnesium stearate and talc (previously passed through a No. 60 mesh U.S. sieve) are then added to the granules. After mixing, the mixture is compressed on a tablet machine to afford a tablet weighing 100 mg.
    
    


FORMULATION EXAMPLE E
Tablets for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the invention
25
mg



Microcrystalline cellulose
400
mg



Silicon dioxide fumed
10
mg



Stearic acid
5
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and then compressed to form tablets (440 mg of composition per tablet).
    
    


FORMULATION EXAMPLE F
Single-scored tablets for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the invention
15
mg



Cornstarch
50
mg



Croscarmellose sodium
25
mg



Lactose
120
mg



Magnesium stearate
5
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and compressed to form a single-scored tablet (215 mg of compositions per tablet).
    
    


FORMULATION EXAMPLE G
A suspension for oral administration is prepared as follows:














Ingredients
Amount




















Compound of the invention
0.1
g



Fumaric acid
0.5
g



Sodium chloride
2.0
g



Methyl paraben
0.15
g



Propyl paraben
0.05
g



Granulated sugar
25.5
g



Sorbitol (70% solution)
12.85
g



Veegum k (Vanderbilt Co.)
1.0
g



Flavoring
0.035
mL



Colorings
0.5
mg










Distilled water
q.s. to 100 mL










    
    
        Representative Procedure: The ingredients are mixed to form a suspension containing 10 mg of active ingredient per 10 mL of suspension.
    
    


FORMULATION EXAMPLE H
A dry powder for administration by inhalation is prepared as follows:














Ingredients
Amount




















Compound of the invention
1.0
mg



Lactose
25
mg










    
    
        Representative Procedure: The active ingredient is micronized and then blended with lactose. This blended mixture is then loaded into a gelatin inhalation cartridge. The contents of the cartridge are administered using a powder inhaler.
    
    


FORMULATION EXAMPLE I
A dry powder for administration by inhalation in a metered dose inhaler is prepared as follows:

    
    
        Representative Procedure: A suspension containing 5 wt. % of a compound of the invention and 0.1 wt. % lecithin is prepared by dispersing 10 g of active compound as micronized particles with mean size less than 10 μm in a solution formed from 0.2 g of lecithin dissolved in 200 mL of demineralized water. The suspension is spray dried and the resulting material is micronized to particles having a mean diameter less than 1.5 μm. The particles are loaded into cartridges with pressurized 1,1,1,2-tetrafluoroethane.
    
    


FORMULATION EXAMPLE J
An injectable formulation is prepared as follows:














Ingredients
Amount




















Compound of the invention
0.2
g



Sodium acetate buffer solution (0.4 M)
40
mL










HCl (0.5 N) or NaOH (0.5 N)
q.s. to pH 4



Water (distilled, sterile)
q.s. to 20 mL










    
    
        Representative Procedure: The above ingredients are blended and the pH is adjusted to 4±0.5 using 0.5 N HCl or 0.5 N NaOH.
    
    


FORMULATION EXAMPLE K
Capsules for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the Invention
4.05
mg



Microcrystalline cellulose (Avicel PH 103)
259.2
mg



Magnesium stearate
0.75
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and then loaded into a gelatin capsule (Size #1, White, Opaque) (264 mg of composition per capsule).
    
    


FORMULATION EXAMPLE L
Capsules for oral administration are prepared as follows:














Ingredients
Amount




















Compound of the Invention
8.2
mg



Microcrystalline cellulose (Avicel PH 103)
139.05
mg



Magnesium stearate
0.75
mg










    
    
        Representative Procedure: The ingredients are thoroughly blended and then loaded into a gelatin capsule (Size #1, White, Opaque) (148 mg of composition per capsule).
    
    


It will be understood that any form of the compounds of the invention, (i.e. free base, pharmaceutical salt, or solvate) that is suitable for the particular mode of administration, can be used in the pharmaceutical compositions discussed above.
Utility
The quinolinone-carboxamide compounds of the invention are 5-HT4 receptor agonists and therefore are expected to be useful for treating medical conditions mediated by 5-HT4 receptors or associated with 5-HT4 receptor activity, i.e. medical conditions which are ameliorated by treatment with a 5-HT4 receptor agonist. Such medical conditions include, but are not limited to, irritable bowel syndrome (IBS), chronic constipation, functional dyspepsia, delayed gastric emptying, gastroesophageal reflux disease (GERD), gastroparesis, diabetic and idiopathic gastropathy, post-operative ileus, intestinal pseudo-obstruction, and drug-induced delayed transit. In addition, it has been suggested that some 5-HT4 receptor agonist compounds may be used in the treatment of central nervous system disorders including cognitive disorders, behavioral disorders, mood disorders, and disorders of control of autonomic function.
In particular, the compounds of the invention increase motility of the gastrointestinal (GI) tract and thus are expected to be useful for treating disorders of the GI tract caused by reduced motility in mammals, including humans. Such GI motility disorders include, by way of illustration, chronic constipation, constipation-predominant irritable bowel syndrome (C-IBS), diabetic and idiopathic gastroparesis, and functional dyspepsia.
In one aspect, therefore, the invention provides a method of increasing motility of the gastrointestinal tract in a mammal, the method comprising administering to the mammal a therapeutically effective amount of a pharmaceutical composition comprising a pharmaceutically-acceptable carrier and a compound of the invention.
When used to treat disorders of reduced motility of the GI tract or other conditions mediated by 5-HT4 receptors, the compounds of the invention will typically be administered orally in a single daily dose or in multiple doses per day, although other forms of administration may be used. The amount of active agent administered per dose or the total amount administered per day will typically be determined by a physician, in the light of the relevant circumstances, including the condition to be treated, the chosen route of administration, the actual compound administered and its relative activity, the age, weight, and response of the individual patient, the severity of the patient's symptoms, and the like.
Suitable doses for treating disorders of reduced motility of the GI tract or other disorders mediated by 5-HT4 receptors will range from about 0.0007 to about 20 mg/kg/day of active agent, preferably from about 0.0007 to about 1 mg/kg/day. For an average 70 kg human, this would amount to from about 0.05 to about 70 mg per day of active agent.
In one aspect of the invention, the compounds of the invention are used to treat chronic constipation. When used to treat chronic constipation, the compounds of the invention will typically be administered orally in a single daily dose or in multiple doses per day. Preferably, the dose for treating chronic constipation will range from about 0.05 to about 70 mg per day.
In another aspect of the invention, the compounds of the invention are used to treat irritable bowel syndrome. When used to treat constipation-predominant irritable bowel syndrome, the compounds of the invention will typically be administered orally in a single daily dose or in multiple doses per day. Preferably, the dose for treating constipation-predominant irritable bowel syndrome will range from about 0.05 to about 70 mg per day.
In another aspect of the invention, the compounds of the invention are used to treat diabetic gastroparesis. When used to treat diabetic gastroparesis, the compounds of the invention will typically be administered orally in a single daily dose or in multiple doses per day. Preferably, the dose for treating diabetic gastroparesis will range from about 0.05 to about 70 mg per day.
In yet another aspect of the invention, the compounds of the invention are used to treat functional dyspepsia. When used to treat functional dyspepsia, the compounds of the invention will typically be administered orally in a single daily dose or in multiple doses per day. Preferably, the dose for treating functional dyspepsia will range from about 0.05 to about 70 mg per day.
The invention also provides a method of treating a mammal having a disease or condition associated with 5-HT4 receptor activity, the method comprising administering to the mammal a therapeutically effective amount of a compound of the invention or of a pharmaceutical composition comprising a compound of the invention.
As described above, compounds of the invention are 5-HT4 receptor agonists. The invention further provides, therefore, a method of agonizing a 5-HT4 receptor in a mammal, the method comprising administering a compound of the invention to the mammal. In addition, the compounds of the invention are also useful as research tools for investigating or studying biological systems or samples having 5-HT4 receptors, or for discovering new 5-HT4 receptor agonists. Moreover, since compounds of the invention exhibit binding selectivity for 5-HT4 receptors as compared with binding to receptors of other 5-HT subtypes, particularly 5-HT3 receptors, such compounds are particularly useful for studying the effects of selective agonism of 5-HT4 receptors in a biological system or sample. Any suitable biological system or sample having 5-HT4 receptors may be employed in such studies which may be conducted either in vitro or in vivo. Representative biological systems or samples suitable for such studies include, but are not limited to, cells, cellular extracts, plasma membranes, tissue samples, mammals (such as mice, rats, guinea pigs, rabbits, dogs, pigs, etc.) and the like.
In this aspect of the invention, a biological system or sample comprising a 5-HT4 receptor is contacted with a 5-HT4 receptor-agonizing amount of a compound of the invention. The effects of agonizing the 5-HT4 receptor are then determined using conventional procedures and equipment, such as radioligand binding assays and functional assays. Such functional assays include ligand-mediated changes in intracellular cyclic adenosine monophosphate (cAMP), ligand-mediated changes in activity of the enzyme adenylyl cyclase (which synthesizes cAMP), ligand-mediated changes in incorporation of analogs of guanosine triphosphate (GTP), such as [35S]GTPγS (guanosine 5′-O-(γ-thio)triphosphate) or GTP-Eu, into isolated membranes via receptor catalyzed exchange of GTP analogs for GDP analogs, ligand-mediated changes in free intracellular calcium ions (measured, for example, with a fluorescence-linked imaging plate reader or FLIPR® from Molecular Devices, Inc.), and measurement of mitogen activated protein kinase (MAPK) activation. A compound of the invention may agonize or increase the activation of 5-HT4 receptors in any of the functional assays listed above, or assays of a similar nature. A 5-HT4 receptor-agonizing amount of a compound of the invention will typically range from about 1 nanomolar to about 1000 nanomolar.
Additionally, the compounds of the invention can be used as research tools for discovering new 5-HT4 receptor agonists. In this embodiment, 5-HT4 receptor binding or functional data for a test compound or a group of test compounds is compared to the 5-HT4 receptor binding or functional data for a compound of the invention to identify test compounds that have superior binding or functional activity, if any. This aspect of the invention includes, as separate embodiments, both the generation of comparison data (using the appropriate assays) and the analysis of the test data to identify test compounds of interest.
Among other properties, compounds of the invention have been found to be potent agonists of the 5-HT4 receptor and to exhibit substantial selectivity for the 5-HT4 receptor subtype over the 5-HT3 receptor subtype in radioligand binding assays. Further, compounds of the invention of which particular mention was made have demonstrated superior pharmacokinetic properties in a rat model. Such compounds are thus expected to be highly bioavailable upon oral administration. In addition, these compounds have been shown not to exhibit an unacceptable level of inhibition of the potassium ion current in an in vitro voltage-clamp model using isolated whole cells expressing the hERG cardiac potassium channel. The voltage-clamp assay is an accepted pre-clinical method of assessing the potential for pharmaceutical agents to change the pattern of cardiac repolarization, specifically to cause, so-called QT prolongation, which has been associated with cardiac arrhythmia. (Cavero et al., Opinion on Pharmacotherapy, 2000, 1, 947-73, Fermini et al., Nature Reviews Drug Discovery, 2003, 2, 439-447) Accordingly, pharmaceutical compositions comprising these compounds of the invention are expected to have an acceptable cardiac profile.
There properties, as well as the utility of the compounds of the invention, can be demonstrated using various in vitro and in vivo assays well-known to those skilled in the art. Representative assays are described in further detail in the following examples.
EXAMPLES
The following synthetic and biological examples are offered to illustrate the invention, and are not to be construed in any way as limiting the scope of the invention. In the examples below, the following abbreviations have the following meanings unless otherwise indicated. Abbreviations not defined below have their generally accepted meanings.

    
    
        Boc=tert-butoxycarbonyl
        (Boc)2O=di-tert-butyl dicarbonate
        DCM=dichloromethane
        DMF=N,N-dimethylformamide
        DMSO=dimethyl sulfoxide
        EtOAc=ethyl acetate
        mCPBA=m-chloroperbenzoic acid
        MeCN=acetonitrile
        MTBE=tert-butyl methyl ether
        PyBop=benzotriazol-1-yloxytripyrrolidino-phosphonium hexafluorophosphate
        Rf=retention factor
        RT=room temperature
        TFA=trifluoroacetic acid
        THF=tetrahydrofuran
    
    


Reagents (including secondary amines) and solvents were purchased from commercial suppliers (Aldrich, Fluka, Sigma, etc.), and used without further purification. Reactions were run under nitrogen atmosphere, unless noted otherwise. Progress of reaction mixtures was monitored by thin layer chromatography (TLC), analytical high performance liquid chromatography (anal. HPLC), and mass spectrometry, the details of which are given below and separately in specific examples of reactions. Reaction mixtures were worked up as described specifically in each reaction; commonly they were purified by extraction and other purification methods such as temperature-, and solvent-dependent crystallization, and precipitation. In addition, reaction mixtures were routinely purified by preparative HPLC: a general protocol is described below. Characterization of reaction products was routinely carried out by mass and 1H-NMR spectrometry. For NMR measurement, samples were dissolved in deuterated solvent (CD3OD, CDCl3, or DMSO-d6), and 1H-NMR spectra were acquired with a Varian Gemini 2000 instrument (300 MHz) under standard observation conditions. Mass spectrometric identification of compounds was performed by an electrospray ionization method (ESMS) with a Perkin Elmer instrument (PE SCIEX API 150 EX).
General Protocol for Analytical HPLC
Crude compounds were dissolved in 50% MeCN/H2O (with 0.1% TFA) at 0.5-1.0 mg/mL concentration, and analyzed using the following conditions:













Column:
Zorbax Bonus-RP (3.5 μm of particle size,



2.1 × 50 mm)


Flow rate:
0.5 mL/min


Mobile Phases:
A = 90% MeCN/10% H2O/0.1% TFA



B = 98% H2O/2% MeCN/0.1% TFA


Gradient:
10% A/90% B (0-0.5 min);



10% A/90% B to 50% A/50% B (linear,



0.5-5 min)


Detector wavelength:
214, 254, and 280 nm.









Alternative conditions, when used, are indicated explicitly.

General Protocol for Preparative HPLC Purification

Crude compounds were dissolved in 50% acetic acid in water at 50-100 mg/mL concentration, filtered, and fractionated using the following procedure:













Column:
YMC Pack-Pro C18 (50a × 20 mm; ID = 5 μm)


Flow rate:
40 mL/min


Mobile Phases:
A = 90% MeCN/10% H2O/0.1% TFA



B = 98% H2O/2% MeCN/0.1% TFA


Gradient:
10% A/90% B to 50% A/50% B over 30 min



(linear)


Detector wavelength:
214 nm.









Preparation of Secondary Amines

Preparation of Secondary Amines not Available Commercially is Exemplified by the following:
Thiomorpholine-1,1-dioxide was prepared from thiomorpholine by protection of the secondary amine to N-Boc thiomorpholine ((Boc)2O, MeOH), oxidation to sulfone (mCPBA, CH2Cl2, 0° C.), and deprotection of the N-Boc group to provide the free amine (CF3CO2H, CH2Cl2). (m/z): [M+H]+ calcd for C4H9NO2S, 136.04; found, 135.9.
The N-sulfonyl derivatives of piperazine were prepared from N-Boc piperazine by reacting with respective sulfonyl chloride (iPr2NEt, CH2Cl2, 0° C.), and deprotecting the N-Boc group (CF3CO2H, CH2Cl2). 1-Methanesulfonyl-piperazine: 1H-NMR (CDCl3; neutral): δ (ppm) 3.1 (t, 4H), 2.9 (t, 4H), 2.7 (s, 3H). 1-(Methylsulfonyl)methanesulfonyl-piperazine: 1H-NMR (CD3OD): δ (ppm) 2.90 (s, 3H), 3.02 (m, 4H), 3.38 (m, 4H), 4.61 (s, 2H). Methanesulfonylpiperazine was also prepared by reacting methanesulfonyl chloride with excess piperazine (>2 equivalents) in water.
The racemic or single chiral isomer forms of 3-acetylaminopyrrolidine were prepared by treating N1-Boc-3-aminopyrrolidine (racemate, 3R, or 3S) with acetyl chloride (iPr2NEt, CH2Cl2, 0° C.), and deprotecting the N-Boc group (CF3CO2H, CH2Cl2). 3-(Acetamido)pyrrolidine: 1H-NMR (DMSO-d6; TFA salt): δ (ppm) 4.2 (quin, 1H), 3.3-3.1 (m, 3H), 2.9 (m, 1H), 2.0 (m, 1H), 1.8 (br s, 4H).
3-((R)-2-Hydroxypropionamido)pyrrolidine was prepared after amidation of N1-Boc-3-aminopyrrolidine (L-lactic acid, PyBOP, DMF, RT), and deprotection of N-Boc group (CF3CO2H, CH2Cl2). (m/z): [M+H]+ calcd for C7H14N2O2, 159.11; found, 159.0. 1H-NMR (CD3OD; TFA salt): δ (ppm) 4.4 (quin, 1H), 4.1 (q, 1H), 3.5-3.4 (m, 2H), 3.3-3.2 (m, 2H), 2.3 (m, 1H), 2.0 (m, 1H), 1.3 (d, 3H).
The N3-alkanesulfonyl derivatives of (3R)-aminopyrrolidine were obtained by treating N1-Boc-(3R)-aminopyrrolidine with propionylsulfonyl chloride or cyclohexylmethylsulfonyl chloride (i-Pr2NEt, CH2Cl2, 0° C.), and deprotecting N-Boc group (CF3CO2H, CH2Cl2).
3-(N-Acetyl-N-methylamido)piperidine was prepared from N3-Cbz protected 3-amino-piperidine-1-carboxylic acid t-butyl ester (De Costa, B., et al. J. Med. Chem. 1992, 35, 4334-43) after four synthetic steps: i) MeI, n-BuLi, THF, −78° C. to rt; ii) H2 (1 atm), 10% Pd/C, EtOH; iii) AcCl, i-Pr2NEt, CH2Cl2; iv) CF3CO2H, CH2Cl2. m/z: [M+H]+ calcd for C8H16N2O: 157.13; found, 157.2. 1H-NMR (CD3OD; TFA salt): δ (ppm) 4.6 (m, 1H), 3.3 (m, 1H), 3.2 (m, 1H), 3.0 (m, 1H), 2.9 (s, 3H), 2.8 (m, 1H), 2.0 (s, 3H), 1.9-1.7 (m, 4H).
3-(N-Acetyl-amido)piperidine was prepared from 3-amino-piperidine-1-carboxylic acid tert-butyl ester after N-acetylation and deprotection of the N-Boc group: i) AcCl, i-Pr2NEt, CH2Cl2; ii) CF3CO2H, CH2Cl2. 1H-NMR (CD3OD; TFA salt): δ (ppm) 3.9 (m, 1H), 3.3 (dd, 1H), 3.2 (m, 1H), 2.9 (dt, 1H), 2.75 (dt, 1H), 2.0-1.9 (m, 2H), 1.9 (s, 3H), 1.8-1.4 (m, 2H).
The N3-alkanesulfonyl derivatives of 3-aminopiperidine were synthesized by reacting the chiral or racemic forms of 3-amino-piperidine-1-carboxylic acid tert-butyl ester with the respective alkanesulfonyl chloride (i-Pr2NEt, CH2Cl2) and deprotecting the N-Boc group (CF3CO2H, CH2Cl2). (3S)-3-(ethanesulfonylamido)piperidine: 1H-NMR (CD3OD): δ (ppm) 1.29(t, 3H, J1=7.4 Hz), 1.50-1.80 (m, 2H), 1.90-2.10 (m, 2H), 2.89 (m, 2H), 3.05 (q, 2H, J1=7.4 Hz), 3.27 (m, 2H), 3.40 (d of d(br), 1H), 3.52 (m, 1H). 3S-Methylsulfonylmethanesulfonylamido-piperidine: 1H-NMR (CD3OD): δ (ppm) 2.13-2.30 (m, 2H), 2.40-2.57 (m, 2H), 2.98 (m, 2H), 3.15 (s, 3H), 3.21 (m, 2H), 3.30 (br d, 1H), 3.74 (m, 1H).
3-(Methylamino)-1-acetylpyrrolidine was prepared from 3-(methylamino)-1-benzylpyrrolidine (TCI America) after four steps: i) (Boc)2O, MeOH, rt; ii) H2 (1 atm), 10% Pd/C, EtOH; iii) AcCl, i-Pr2NEt, CH2Cl2; iv) CF3CO2H, CH2Cl2. (m/z): [M+H]+ calcd for C7H14N2O: 143.12; found, 143.0.
3-(Methylamino)-1-(methanesulfonyl)pyrrolidine was prepared from 3-(methylamino)-1-benzylpyrrolidine after four steps: i) (Boc)2O, MeOH, rt; ii) H2 (1 atm), 10% Pd/C, EtOH; iii) CH3SO2Cl, i-Pr2NEt, CH2Cl2; iv) CF3CO2H, CH2Cl2. (m/z): [M+H]+ calcd for C6H14N2O2S: 179.08; found, 179.2. 3R-Methylamino-1-(methanesulfonyl)pyrrolidine was prepared in a similar manner from (3R)-(methylamino)-1-benzylpyrrolidine.
Derivatives of tetrahydro-3-thiophenamine-1,1-dioxide were prepared following the protocol of Loev, B. J. Org. Chem. 1961, 26, 4394-9 by reacting 3-sulfolene with a requisite primary amine in methanol (cat. KOH, rt). N-Methyl-3-tetrahydrothiopheneamine-1,1-dioxide (TFA salt): 1H-NMR (DMSO-d6): δ (ppm) 9.4 (br s, 2H), 4.0-3.8 (quin, 1H), 3.6-3.5 (dd, 1H), 3.4-3.3 (m, 1H), 3.2-3.1 (m, 2H), 2.5 (s, 3H), 2.4 (m, 1H), 2.1 (m, 1H). N-2-(1-hydroxy)ethyl-3-tetrahydrothiopheneamine-1,1-dioxide: (m/z): [M+H]+ calcd for C6H13NO3S: 180.07; found, 180.2.
N-Methyl-tetrahydro-2H-thiopyran-4-amine-1,1-dioxide was prepared from tetrahydro-4H-thiopyran-4-one: i) MeNH2, NaBH4; ii) (Boc)2O, MeOH; iii) mCPBA, CH2Cl2, 0° C.; iv) CF3CO2H, CH2Cl2. (m/z): [M+H]+ calcd for C6H13NO2S 164.07; found, 164.9. 1H-NMR (CD3OD; TFA salt): δ (ppm) 3.4-3.1 (m, 5H), 2.7 (s, 3H), 2.4 (br d, 2H), 2.1 (br m, 2H).
1-Acetyl-3-(methylamino)piperidine was prepared from N3-Cbz protected 3-methylamino-piperidine: i) AcCl, i-Pr2NEt, CH2Cl2; ii) H2 (1 atm), 10% Pd/C, EtOH. 1H-NMR (CD3OD): δ (ppm) 4.0 (m, 1H), 3.6 (m, 1H), 3.4-3.2 (m, 2H), 3.0 (m, 1H), 2.6 (s, 3H), 2.1 (s, 3H), 1.8-1.6 (m, 4H).
1-(Methanesulfonyl)-3-(methylamino)piperidine was prepared from N3-Cbz protected 3-methylamino-piperidine: i) CH3SO2Cl, i-Pr2NEt, CH2Cl2; ii) H2 (1 atm), 10% Pd/C, EtOH. (m/z): [M+H]+ calcd for C7H16N2O2S 193.10; found, 193.0. 1H-NMR (DMSO-d6; TFA salt): δ (ppm) 3.4 (dd, 1H), 3.2 (m, 2H), 3.10 (s, 3H), 3.0-2.9 (m, 2H), 2.8 (s, 3H), 1.85-1.75 (m, 2H), 1.6-1.4 (m, 2H).
The N-derivatives of piperazine such as 1-(methoxycarbonyl)piperazine, 1-(dimethylaminocarbonyl)piperazine, and 1-(dimethylaminosulfonyl)piperazine were prepared by reacting piperazine with methylchloroformate, dimethylaminochoroformate, or dimethylaminosulfamoyl chloride, respectively.
1-Methylamino-2-methylsulfonylethane was obtained by reacting methylamine with methyl vinyl sulfone in methanol.
N-[2-(2-methoxyethylamino)ethyl], N-methyl-methanesulfonamide was synthesized starting from partially N-Boc protected ethanediamine by the following four step reaction sequence: i) methylsulfonyl chloride, triethylamine; ii) MeI, Cs2CO3; iii) NaH, 1-bromo-2-methoxyethane; iv) CF3CO2H.
Methyl 4-piperidinylcarbamate was prepared from the reaction of N1-Boc protected 4-aminopiperidine with methylchloroformate followed by the deprotection of the N-Boc group.
4-Piperidinol-dimethylcarbamate, and N-dimethyl-N′-(3-piperidinyl)urea were prepared by reacting dimethylcarbamoyl chloride with N-Boc protected 4-piperidinol or N1-Boc-3-aminopiperidine, respectively.
3-(Methylamino)-1-(dimethylaminosulfonyl)pyrrolidine was obtained by reacting 3-(N-methyl-N-Boc-amino)pyrrolidine with dimethylsulfamoyl chloride.
2-(3-Pyrrolidinyl)isothiazolidine-1,1-dioxide was synthesized by treating N1-Boc protected 3-aminopyrrolidine with 3-chloropropylsulfonyl chloride in the presence of triethylamine, and followed by deprotection of the Boc group by treatment with trifluoroacetic acid.
Preparation 1
(1S,3R,5R)-3-amino-8-azabicyclo[3.2.1]octane-8-carboxylic acid tert-butyl ester
a. Preparation of 8-benzyl-8-azabicyclo[3.2.1]octan-3-one
Concentrated hydrochloric acid (30 mL) was added to a heterogeneous solution of 2,5-dimethoxy tetrahydrofuran (82.2 g, 0.622 mol) in water (170 mL) while stirring. In a separate flask cooled to 0° C. (ice bath), concentrated hydrochloric acid (92 mL) was added slowly to a solution of benzyl amine (100 g, 0.933 mol) in water (350 mL). The 2,5-dimethoxytetrahydrofuran solution was stirred for approximately 20 min, diluted with water (250 mL), and then the benzyl amine solution was added, followed by the addition of a solution of 1,3-acetonedicarboxylic acid (100 g, 0.684 mol) in water (400 mL) and then the addition of sodium hydrogen phosphate (44 g, 0.31 mol) in water (200 mL). The pH was adjusted from pH 1 to pH  ̃4.5 using 40% NaOH. The resulting cloudy and pale yellow solution was stirred overnight. The solution was then acidified to pH 3 from pH 7.5 using 50% hydrochloric acid, heated to 85° C. and stirred for 2 hours. The solution was cooled to room temperature, basified to pH 12 using 40% NaOH, and extracted with DCM (3×500 mL). The combined organic layers were washed with brine, dried (MgSO4), filtered and concentrated under reduced pressure to produce the crude title intermediate as a viscous brown oil (52 g).
To a solution of the crude intermediate in methanol (1000 mL) was added di-tert-butyl dicarbonate (74.6 g, 0.342 mol) at 0° C. The solution was allowed to warm to room temperature and stirred overnight. The methanol was removed under reduced pressure and the resulting oil was dissolved in dichloromethane (1000 mL). The intermediate was extracted into 1 M H3PO4 (1000 mL) and washed with dichloromethane (3×250 mL) The aqueous layer was basified to pH 12 using aqueous NaOH, and extracted with dichloromethane (3×500 mL). The combined organic layers were dried (MgSO4), filtered and concentrated under reduced pressure to produce the title intermediate as a viscous, light brown oil. 1H-NMR (CDCl3) δ (ppm) 7.5-7.2 (m, 5H, C6H5), 3.7 (s, 2H, CH2Ph), 3.45 (broad s, 2H, CH—NBn), 2.7-2.6 (dd, 2H, CH2CO), 2.2-2.1 (dd, 2H, CH2CO), 2.1-2.0 (m, 2H, CH2CH2), 1.6 (m, 2H, CH2CH2). (m/z): [M+H]+ calcd for C14H17NO 216.14; found, 216.0.
b. Preparation of 3-oxo-8-azabicyclo[3.2.1]octane-8-carboxylic acid tert-butyl ester
To a solution of 8-benzyl-8-azabicyclo[3.2.1]octan-3-one (75 g, 0.348 mol) in EtOAc (300 mL) was added a solution of di-tert-butyl dicarbonate (83.6 g, 0.383 mol, 1.1 eq) in EtOAc (300 mL). The resulting solution and rinse (100 mL EtOAc) was added to a 1 L Parr hydrogenation vessel containing 23 g of palladium hydroxide (20 wt. % Pd, dry basis, on carbon,  ̃50% wet with water; e.g. Pearlman's catalyst) under a stream of nitrogen. The reaction vessel was degassed (alternating vacuum and N2 five times) and pressurized to 60 psi of H2 gas. The reaction solution was agitated for two days and recharged with H2 as needed to keep the H2 pressure at 60 psi until the reaction was complete as monitored by silica thin layer chromatography. The black solution was then filtered through a pad of Celite® and concentrated under reduced pressure to yield the title intermediate quantitatively as a viscous, yellow to orange oil. It was used in the next step without further treatment. 1H NMR (CDCl3)  (ppm) 4.5 (broad, 2H, CH—NBoc), 2.7 (broad, 2H, CH2CO), 2.4-2.3 (dd, 2H, CH2C1H2), 2.1 (broad m, 2H, CH2CO), 1.7-1.6 (dd, 2H, CH2CH2), 1.5 (s, 9H, (CH3)3COCON)).
c. Preparation of (1S,3R,5R)-3-amino-8-azabicyclo[3.2.1]octane-8-carboxylic acid tert-butyl ester
To a solution of the product of the previous step (75.4 g, 0.335 mol) in methanol (1 L) was added ammonium formate (422.5 g, 6.7 mol), water (115 mL) and 65 g of palladium on activated carbon (10% on dry basis,  ̃50% wet with water; Degussa type E101NE/W) under a stream of N2 while stirring via mechanical stirrer. After 24 and 48 hours, additional portions of ammonium formate (132 g, 2.1 mol) were added each time. Once reaction progression ceased, as monitored by anal. HPLC, Celite® (>500 g) was added and the resulting thick suspension was filtered and then the collected solid was rinsed with methanol ( ̃500 mL). The filtrates were combined and concentrated under reduced pressure until all methanol had been removed. The resulting cloudy, biphasic solution was then diluted with 1M phosphoric acid to a final volume of 1.5 to 2.0 L at pH 2 and washed with dichloromethane (3×700 mL). The aqueous layer was basified to pH 12 using 40% aq. NaOH, and extracted with dichloromethane (3×700 mL). The combined organic layers were dried over MgSO4, filtered, and concentrated by rotary evaporation, then high-vacuum leaving 52 g (70%) of the title intermediate, commonly N-Boc-endo-3-aminotropane, as a white to pale yellow solid. The isomer ratio of endo to. exo amine of the product was >99 based on 1H-NMR analysis (>96% purity by analytical HPLC). 1H NMR (CDCl3) δ (ppm) 4.2-4.0 (broad d, 2H, CHNBoc), 3.25 (t, 1H, CHNH2), 2.1-2.05 (m, 4H), 1.9 (m, 2H), 1.4 (s, 9H, (CH3)3OCON), 1.2-1.1 (broad, 2H). (m/z): [M+H]+ calcd for C12H22N2O2) 227.18; found, 227.2. Analytical HPLC (isocratic method; 2:98 (A:B) to 90:10 (A:B) over 5 min): retention time=3.68 min.
Preparation 2
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid
First, acetone (228.2 mL, 3.11 mol) was added to a stirred suspension of 2-aminophenylmethanol (255.2 g, 2.07 mol) and acetic acid (3.56 mL, 62 mmol) in water (2 L) at room temperature. After 4 h, the suspension was cooled to 0° C. and stirred for an additional 2.5 h and then filtered. The solid was collected and washed with water and the wet solid cooled and dried by lyophilisation to yield 2,2,-dimethyl-1,4-dihydro-2H-benzo[1,3]oxazine (332.2 g, 98%) as an off-white solid. 1H NMR (CDCl3; 300 MHz): 1.48 (s, 6H, C(CH3)2), 4.00 (bs, 1H, NH), 4.86 (s, 2H, CH2), 6.66 (d, 1H, ArH), 6.81 (t, 1H, ArH), 6.96 (d, 1H, ArH), 7.10 (t, 1H, ArH).
A solution of 2,2,-dimethyl-1,4-dihydro-2H-benzo[1,3]oxazine (125 g, 0.77 mol) in THF (1 L) was filtered through a scintillation funnel and then added dropwise via an addition funnel, over a period of 2.5 h, to a stirred solution of 1.0 M LiAlH4 in THF (800 mL) at 0° C. The reaction was quenched by slow portionwise addition of Na2SO4.10H2O (110 g), over a period of 1.5 h, at 0° C. The reaction mixture was stirred overnight, filtered and the solid salts were washed thoroughly with THF. The filtrate was concentrated under reduced pressure to yield 2-isopropylaminophenylmethanol (120 g, 95%) as a yellow oil. 1H NMR (CDCl3; 300 MHz): 1.24 (d, 6H, CH(CH3)2), 3.15 (bs, 1H, OH), 3.61 (sept, 1H, CH(CH3)2), 4.57 (s, 2H, CH2), 6.59 (t, 1H, ArH), 6.65 (d, 1H, ArH), 6.99 (d, 1H, ArH), 7.15 (t, 1H, ArH).
Manganese dioxide (85% 182.6 g, 1.79 mol) was added to a stirred solution of 2-isopropylaminophenylmethanol (118 g, 0.71 mol) in toluene (800 mL) and the reaction mixture was heated to 117° C. for 4 h. The reaction mixture was allowed to cool to room temperature overnight and then filtered through a pad of Celite which was eluted with toluene. The filtrate was concentrated under reduced pressure to yield 2-isopropylaminobenzaldehyde (105 g, 90%) as an orange oil. 1H NMR (CDCl3; 300 MHz): 1.28 (d, 6H, CH(CH3)2), 3.76 (sept, 1H, CH(CH3)2), 6.65 (t, 1H, ArH, 6.69 (d, 1H, ArH), 7.37 (d, 1H, ArH, 7.44 (t, 1H, ArH, 9.79 (s, 1H, CHO).
2,2-Dimethyl-[1,3]dioxane-4,6-dione, commonly Meldrum's acid, (166.9 g, 1.16 mol) was added to a stirred solution of 2-isopropylaminobenzaldehyde (105 g, 0.64 mol), acetic acid (73.6 mL, 1.29 mol) and ethylenediamine (43.0 mL, 0.64 mol) in methanol (1 L) at 0° C. The reaction mixture was stirred for 1 h at 0° C. and then at room temperature overnight. The resulting suspension was filtered and the solid washed with methanol and collected to yield the title intermediate, 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid (146 g, 98%) as an off-white solid. 1H NMR (CDCl3; 300 MHz): 1.72 (d, 6H, CH(CH3)2), 5.50 (bs, 1H, CH(CH3)2), 7.44 (t, 1H, ArH), 7.75-7.77 (m, 2H, ArH), 7.82 (d, 1H, ArH), 8.89 (s, 1H, CH).
Preparation 3
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-azabicyclo[3.2.1]oct-3-yl}amide
a. Preparation of (1S,3R,5R)-3-[1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]octane-8-carboxylic acid tert-butyl ester
Thionyl chloride (36.6 mL, 0.52 mol) was added to a stirred suspension of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid (80 g, 0.35 mol) in toluene (600 mL) at 85° C. and the reaction mixture then heated to 95° C. for 2 h. The reaction mixture was cooled to room temperature and then added over 25 min to a vigorously stirred biphasic solution of (1S,3R,5R)-3-amino-8-azabicyclo[3.2.1]octane-8-carboxylic acid tert-butyl ester (78.2 g, 0.35 mol) and sodium hydroxide (69.2 g, 1.73 mol) in toluene/water (1:1) (1 L) at ° C. After 1 h, the layers were allowed to separate and the organic phase concentrated under reduced pressure. The aqueous phase was washed with EtOAc (1 L) and then (500 mL) and the combined organic extracts used to dissolve the concentrated organic residue. This solution was washed with 1M H3PO4 (500 mL), sat. aq. NaHCO3 (500 mL) and brine (500 mL), dried over MgSO4, filtered and concentrated under reduced pressure to yield the title intermediate (127.9 g, approx. 84%) as a yellow solid. 1H NMR (CDCl3): 1.47 (s, 9H), 1.67 (d, 6H), 1.78-1.84 (m, 2H), 2.04-2.18 (m, 6H), 4.20-4.39 (m, 3H), 5.65 (bs, 1H), 7.26 (dd. 1H), 7.63 (m, 2H), 7.75 (dd, 1H), 8.83 (s, 1H), 10.63 (d, 1H).
b. Preparation of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-azabicyclo[3.2.1]oct-3-yl}amide
TFA (300 mL) was added to a stirred solution of the product of the previous step (127.9 g) in CH2Cl2 (600 mL) at 0° C. The reaction mixture was warmed to room temperature and stirred for 1 h and then concentrated under reduced pressure. The oily brown residue was then poured into a vigorously stirred solution of ether (3 L) and a solid precipitate formed immediately. The suspension was stirred overnight and then the solid collected by filtration and washed with ether to yield the title intermediate as its trifluoroacetic acid salt (131.7 g, 86% over two steps) as a light yellow solid. 1H NMR (CDCl3): 1.68 (d, 6H), 2.10 (d, 2H), 2.33-2.39 (m, 4H), 2.44-2.61 (m, 2H), 4.08 (bs, 2H), 4.41 (m, 1H), 5.57 (bs, 1H), 7.31 (m. 1H), 7.66 (m, 2H), 7.77 (d, 1H), 8.83 (s, 1H), 9.38 (bd, 2H), 10.78 (d, 1H).
Preparation 4
3-hydroxy-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl)carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-azabicyclo[3.2.1]octane
2-Bromomethyloxirane (10.72 mL, 129.5 mmol) was added to a stirred solution of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-azabicyclo[3.2.1]oct-3-yl}amide trifluoroacetic acid salt (14.65 g, 43.2 mmol) in ethanol (150 mL) at room temperature. The reaction mixture was stirred for 36 h, at which time a solid precipitate formed. The solid was collected by filtration and washed with ethanol (70 mL) to yield the title intermediate as the bromide salt (8.4 g). (m/z): [M]+ calcd for C23H30N3O3 396.23; found, 396.5. Retention time (anal. HPLC: 2-50% MeCN/H2O over 5 min)=4.13 min.
Preparation 5
3-methoxy-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl)carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-azabicyclo[3.2.1]octane
Potassium-tert-butoxide (1.63 g, 14.5 mmol) was added to a stirred suspension of 3-hydroxy-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl)carbonyl]amino}spiro-[azetidine-1,8′-(1S,3R,5R)-8-azabicyclo[3.2.1]octane bromide (3.45 g, 7.25 mmol) in dichloromethane (100 mL) at room temperature. After 2 min, methyl iodide (0.477 mL, 7.61 mmol) was added to the reaction mixture. After 30 min, water (2 mL) was added to quench the reaction and the reaction mixture concentrated under reduced pressure. The residue was dissolved in a minimal volume of acetic acid/water (1:1) and purified by preparative HPLC to yield the title intermediate as a trifluoroacetic acid salt (2.1 g). (m/z): [M]+ calcd for C24H32N3O3, 410.24; found 410.5. Retention time (anal. HPLC: 2-50% MeCN/H2O over 5 min)=4.36 min.
Preparation 6
3-(methylaminocarbonyloxy)-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl-carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-azabicyclo[3.2.1]octane]
Methyl isocyanate dissolved in 2.0 mL of DMF (125 mg/mL, 4.2 mmol) was added to a solution of 3-hydroxy-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl-carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-aza-bicyclo[3.2.1]octane] (2.0 g, 4.2 mmol) and N,N-diisopropylethylamine (0.73 mL, 4.2 mmol) in DMF (40 mL). A catalytic amount of potassium tert-butoxide (1% by weight) was added and the mixture was stirred at room temperature for 5 h. An additional 4.2 mmol of methyl isocyanate and N,N-diisopropylethylamine were added and the reaction went to completion after stirring for an additional. 16 h. The reaction mixture was concentrated under vacuum and the resultant solid was used as a crude product (2.1 g). (m/z): [M+H]+ calcd for C25H33N4O4, 453.25; found 453.2. Retention time (anal. HPLC: 10-70% MeCN/H2O over 6 min)=2.38 min. 1H NMR (CD3OD): δ (ppm) 1.62 (d, 6H), 2.16 (m, 2H), 2.00 (br d, 3H), 2.40-2.57 (m, 6H), 4.09 (br s, 1H), 4.17 (br s, 1H), 4.26 (q, 1H), 4.53 (br s, 1H), 5.22 (br s, 1H), 7.00 (br m, 1H), 7.25 (t, 1H), 7.69 (m, 1H), 7.80 (m, 2H), 8.69 (s, 1H), 10.90 (d, 1H).
Example 1
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
Piperazine N-methylsulfonamide/trifluoroacetic acid salt (1.23 g, 4.41 mmol) was added to a stirred solution of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-azabicyclo[3.2.1]oct-3-yl}amide/trifluoroacetic acid salt (2.00 g, 4.41 mmol) and N,N-diisopropylethylamine (3.46 mL, 19.85 mmol) in methanol (50 mL). 1,3-Dibromopropanol (0.45 mL, 4.41 mmol) was subsequently added and the reaction mixture was heated to 75° C. for 16 h, at which point a further amount of piperazine sulfonamide/TFA (798 mg, 2.87 mmol) and 1,3-dibromopropanol (0.29 mL, 2.87 mmol) were added and the reaction mixture heated at 75° C. for a further 2 h. The reaction mixture was concentrated in vacuo, diluted with 50% aqueous acetic acid (8 mL) and purified by preparative HPLC (5-32% gradient) to afford the title compound (770 mg) as a white solid. (m/z): [M+H]+ calcd for C28H41N5O5S 560.29; found, 560.2. Retention time (anal. HPLC: 2-40% MeCN/H2O over 6 min)=4.05 min. 1H-NMR (CD3OD): δ (ppm) 1.62 (d, 6H), 2.16 (m, 2H), 2.40-2.57 (m, 6H), 2.89 (s, 3H), 3.16 (m, 4H), 3.38 (br s, 4H), 3.51 (br s, 4H), 4.09 (br s, 1H), 4.17 (br s, 1H), 4.26 (q, 1H), 4.53 (br s, 1H), 5.45 (br s, 1H), 7.31 (t, 1H), 7.69 (m, 1H), 7.80 (m, 2H), 8.74 (s, 1H), 11.00 (d, 1H).
Example 2
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid ((1S,3R,5R)-8-{2-hydroxy-3-[4-(propane-2-sulfonyl)piperazin-1-yl]-propyl}-8-azabicyclo[3.2.1]oct-3-yl)amide
Following the procedure of Example 1 with the substitution of piperazine N-isopropylsulfonamide for piperazine N-methylsulfonamide, the title compound was prepared. (m/z): [M+H]+ calcd for C30H45N5O5S, 588.32; found 588.4. Retention time (anal. HPLC: 5-75% MeCN/H2O over 6 min)=2.16 min. 1H NMR (CD3OD): δ (ppm) 1.22 (d, 6H), 1.62 (d, 6H), 2.16 (m, 2H), 2.40-2.57 (m, 6H), 3.08 (m, 2H), 3.38 (br s, 4H), 3.51 (br s, 4H), 4.09 (br s, 1H), 4.17 (br s, 1H), 4.26 (q, 1H), 4.41 (br s, 1H), 7.31 (t, 1H), 7.69 (m, 1H), 7.80 (m, 2H).
Example 3
Alternative synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid ((1S,3R,5R)-8-{2-hydroxy-3-[4-(propane-2-sulfonyl)-piperazin-1-yl]propyl}-8-azabicyclo[3.2.1]oct-3-yl)amide
Piperazine N-isopropylsulfonamide trifluoroacetic acid salt (128 mg, 0.42 mmol) was dissolved in a solution of 3-hydroxy-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl-carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-aza-bicyclo[3.2.1]octane] (100 mg, 0.21 mmol) and N,N-diisopropylethylamine (0.11 mL, 0.63 mmol) in ethanol (10 mL). The reaction mixture was shaken in a heating block at 100° C. for 3 h. It was then concentrated under vacuum, diluted with 50% aqueous acetic acid (7.5 mL) and purified by preparative HPLC (2-40% gradient) to afford the title compound (93 mg) as a white solid.
Example 4
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(1,1-dioxo-1λ6-thiomorpholin-4-yl)-2-hydroxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
Following the procedure of Example 3 with the substitution of thiomorpholine-1,1-dioxide for piperazine N-isopropylsulfonamide, the title compound was prepared. (m/z): [M+H]+ calcd for C27H38N4O5S, 531.27; found 531.3. Retention time (anal. HPLC: 2-50% MeCN/H2O over 6 min)=3.60 min.
Example 5
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(4-acetylpiperazin-1-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
N-Acetylpiperazine (0.16 mmol) was dissolved in a solution of 3-methoxy-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl-carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-azabicyclo[3.2.1]octane] (42 mg, 0.08 mmol) and N,N-diisopropylethyl-amine (0.056 mL, 0.32 mmol) in ethanol (1 mL). The reaction mixture was shaken in a heating block at 80° C. for 16 h. The reaction mixture was concentrated under vacuum, diluted with 50% aqueous acetic acid (1.5 mL) and purified by preparative HPLC (5-32% gradient) to afford the title compound. (m/z): [M+H]+ calcd for C30H43N5O4, 538.34; found, 538.4. Retention time (anal. HPLC: 5-65% MeCN/H2O over 4 min)=2.12 min.
Example 6
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(4-methanesulfonylmethanesulfonylpiperazin-1-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
Following the procedure of Example 5 with the substitution of piperazine N-(1-methylsulfonyl)methanesulfonamide for N-acetylpiperazine, the title compound was prepared. (m/z): [M+H]+ calcd for C30H45N5O7S2, 652.29; found, 652.2. Retention time (anal. HPLC: 5-65% MeCN/H2O over 4 min)=2.31 min.
Example 7
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(1,1-dioxo-1λ6-thiomorpholin-4-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
Following the procedure of Example 5 with the substitution of thiomorpholine-1,1-dioxide for N-acetylpiperazine, the title compound was prepared. (m/z): [M+H]+ calcd for C28H40N4O5S, 545.28; found 545.2. Retention time (anal. HPLC: 5-65% MeCN/H2O over 4 min)=2.53 min.
Example 8
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(S)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)-propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
a. Preparation of (S)-1-chloro-3-(4-methylsulfonyl-1-piperazinyl)-2-propanol
(S)-Epichlorohydrin (48.0 mL, 0.612 mol) was added to a stirred solution of piperazine N-methylsulfonamide (87.3 g, 0.532 mol) in ethanol (1.33 L) at room temperature. The reaction mixture was stirred for 18 h and the white solid precipitate which formed was collected by filtration and washed with ethanol to afford (S)-1-chloro-3-(4-methylsulfonyl-1-piperazinyl)-2-propanol (107.76 g) as a white solid which was used without further purification. (m/z): [M+H]+ calcd for C8H17ClN2O3S, 257.07; found, 257.2. 1H-NMR (DMSO): δ (ppm) 2.37 (dd, 1H), 2.45 (dd, 1H), 2.50-2.58 (m, 4H), 2.86 (s, 3H), 3.09 (m, 4H), 3.55 (dd, 1H), 3.65 (dd, 1H), 3.84 (m, 1H), 5.09 (d, 1H).
b. Preparation of (S)-1-methylsulfonyl-4-(oxiranylmethyl)piperazine
Sodium hydroxide (22.15 g, 0.534 mol) was added to a vigorously stirred solution of the product of the previous step (118.13 g, 0.461 mol) in 80% THF in water (1500 mL) at 0° C. The reaction mixture was stirred for 90 min and the layers were separated. The organic layer was concentrated under vacuum and diluted with dichloromethane (1500 mL) and washed with a mixture of the previously separated aqueous layer and 1M NaOH (500 mL). The organic layer was further washed with 1M NaOH (500 mL) and brine (500 mL), dried (MgSO4), filtered and concentrated under vacuum to yield the title intermediate (90.8 g) as a white crystalline solid. The product was recrystallised from hot 1:1 mixture of EtOAc and hexane (800 mL) to yield 43.33 g of pure epoxide. (m/z): [M+H]+ calcd for C8H16N2O3S, 221.10; found 221.3. 1H-NMR (DMSO-d6): δ (ppm) 2.22 (dd, 1H), 2.45-2.60 (m, 5H), 2.69-2.75 (m, 2H), 2.87 (s, 3H), 3.02 (m, 1H), 3.11 (m, 4H).
c. Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(S)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
A suspension of(S)-1-methylsulfonyl-4-(oxiranylmethyl)piperazine (69.4 g, 0.316 mol) in ethanol (980 mL) was added to 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-azabicyclo[3.2.1]oct-3-yl}amide (100 g, 0.295 mol) and the reaction mixture heated at 80° C. for 18.5 h. The reaction mixture was cooled to room temperature, and concentrated under vacuum. The foamy solid was suspended in a mixture of acetonitrile and water (860 mL/940 mL), heated, and sonicated until it became homogenous. The solution was filtered while hot and the filtrate was allowed to cool to 5° C. Crystals were formed and collected by filtration to yield the title compound (122 g) as a white crystalline solid. (m/z): [M+H]+ calcd for C28H41N5O5S, 560.29; found 560.5. Retention time (anal. HPLC: 2-40% MeCN/H2O over 6 min)=4.05 min. 1H-NMR (CD3OD, 400 MHz): δ (ppm) 1.68 (d, 6H, CH(CH3)2), 1.73-1.76 (br d, 2H), 2.10 (br s, 4H, 2×CHCH2), 2.28 (m, 2H), 2.36 (dd, 1H), 2.42 (dd, 1H), 2.47-2.53 (m, 2H), 2.65 (m, 4H), 2.85 (s, 3H, SO2CH3), 3.24 (t, 4H, 2×CH2SO2CH3), 3.29 (br s, 1H, CHN), 3.36 (br s, 1H, CHN), 3.86 (m, 1H, CHNH), 4.19 (t, 1H, CHOH), 5.50 (br s, 1H, CH(CH3)2), 7.34 (t, 1H, ArH), 7.72 (m, 1H, ArH), 7.83 (m, 2H, 2×ArH), 8.76 (s, 1H, C═CH). 13C-NMR (CD3OD, 100 MHz): δ (ppm) 19.8 (q, CH(CH3)2), 26.7, 26.8 (two t), 34.3 (q, SO2CH3), 37.2 (t), 42.5 (d), 46.9 (t), 54.3 (t), 58.3 (t), 60.2, 60.9 (two d), 63.6 (t), 68.5 (d), 116.5 (d, CH(CH3)2), 121.7, 122.4 (two s), 124.1, 132.4, 133.9 (three d), 141.4 (s), 144.7 (d), 164.0, 164.4 (two s, 2×C═O).
Example 9
Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(R)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)-propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
a. Preparation of (R)-1-chloro-3-(4-methylsulfonyl-1-piperazinyl)-2-propanol
(R)-Epichlorohydrin (3.10 mL, 39.5 mmol) was added to a stirred solution of piperazine sulfonamide trifluoroacetic acid (10.0 g, 35.9 mmol) and N,N-diisopropyl-ethylamine (6.26 mL, 35.9 mmol) in ethanol (150 mL) at room temperature. The reaction mixture was stirred for 18 h and a further amount of (R)-epichlorohydrin was added (0.28 mL, 3.6 mmoL) and stirred for an additional 3 h. The reaction mixture was concentrated under vacuum and the white solid was suspended in ethanol (150 mL) and stirred for 2 days. The solid was collected by filtration and washed with cold ethanol to yield (R)-1-chloro-3-(4-methylsulfonyl-1-piperazinyl)-2-propanol (5.69 g) as a white solid which was used without further purification. (m/z): [M+H]+ calcd for C8H17ClN2O3S, 257.07; found 257.2. 1H-NMR (DMSO-d6): δ (ppm) 2.37 (dd, 1H), 2.45 (dd, 1H), 2.50-2.58 (m, 4H), 2.86 (s, 3H), 3.09 (m, 4H), 3.55 (dd, 1H), 3.65 (dd, 1H), 3.84 (m, 1H), 5.09 (d, 1H).
b. Preparation of (R)-1-methylsulfonyl-4-(oxiranylmethyl)piperazine
Sodium hydroxide (1.07 g, 26.7 mmol) was added to a vigorously stirred solution of the product of the previous step (5.69 g, 22.2 mmol) in a mixture of 80% THF in water (180 mL). The reaction mixture was stirred for 35 min, concentrated under vacuum to approximately 50 mL by volume and diluted with chloroform (200 mL) and washed with 1M NaOH (2×70 mL) and brine (70 mL). The organic layer was dried (MgSO4), filtered and concentrated under vacuum to yield the title intermediate (4.35 g) as a white crystalline solid. The product was recrystallised from hot EtOAc/hexane (1:1; 800 mL) to yield pure epoxide (2.62 g). (m/z): [M+H]+ calcd for C8H16N2O3S, 221.10; found, 221.3. 1H-NMR (DMSO-d6): δ (ppm) 2.22 (dd, 1H), 2.45-2.60 (m, 5H), 2.69-2.75 (m, 2H), 2.87 (s, 3H), 3.02 (m, 1H), 3.11 (m, 4H).
c. Synthesis of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(R)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-azabicyclo[3.2.1]oct-3-yl}amide (1.49 g, 4.38 mmol) was added to a stirred solution of (R)-1-methylsulfonyl-4-(oxiranylmethyl)piperazine (964 mg, 4.38 mmol) in toluene (20 mL) and the reaction mixture heated at 98° C. for 15 h. The reaction mixture was cooled to room temperature, concentrated under vacuum, diluted with 50% aqueous acetic acid (12 mL) and purified by preparative HPLC (5-30% gradient) to afford the title compound (492 mg) as a white solid. (m/z): [M+H]+ calcd for C28H41N5O5S, 560.29; found, 560.2. Retention time (anal. HPLC: 2-40% MeCN/H2O over 6 min)=4.05 min. 1H-NMR (CD3OD): δ (ppm) 1.62 (d, 6H), 2.16 (m, 2H), 2.40-2.57 (m, 6H), 2.89 (s, 3H), 3.16 (m, 4H), 3.38 (br s, 4H), 3.51 (br s, 4H), 4.09 (br s, 1H), 4.17 (br s, 1H), 4.26 (q, 1H), 4.53 (br s, 1H), 5.45 (br s, 1H), 7.31 (t, 1H), 7.69 (m, 1H), 7.80 (m, 2H), 8.74 (s, 1H), 11.00 (d, 1H).
Example 10
Synthesis of methyl-carbamic acid 2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo-[3.2.1]oct-8-yl}-1-(4-methanesulfonylpiperazin-1-ylmethyl)ethyl ester
Piperazine N-methylsulfonamide trifluoroacetic acid salt (0.20 mmol) was added to a solution of 3-(methylaminocarbonyloxy)-3′-{[1-isopropyl-2-oxo-1,2-dihydroquinolin-3-yl-carbonyl]amino}spiro[azetidine-1,8′-(1S,3R,5R)-8-azabicyclo[3.2.1]octane] (45.4 mg, 0.10 mmol) and N,N-diisopropylethylamine (0.087 mL, 0.50 mmol) in DMF (1 mL). The reaction mixture was shaken in a heating block at 85° C. for 16 h. The reaction mixture was concentrated under vacuum, diluted with 50% aqueous acetic acid (7.5 mL) and purified by preparative HPLC (2-50% gradient) to afford the title compound (24 mg) as a white solid. (m/z): [M+H]+ calcd for C30H44N6O6S, 617.31; found 617.2. Retention time (anal. HPLC: 2-50% MeCN/H2O over 6 min)=3.82 min.
Example 11
Synthesis of methyl-carbamic acid 1-(4-dimethylcarbamoyl-piperazin-1-ylmethyl)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydro-quinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}ethyl ester
Following the procedure of Example 10 with the substitution of 1-(dimethylcarbamoyl)piperazine for piperazine N-methylsulfonamide, the title compound was prepared. (m/z): [M+H]+ calcd for C32H47N7O5, 610.37; found 610.4. Retention time (anal. HPLC: 2-65% MeCN/H2O over 4 min)=2.67 min.
Example 12
Synthesis of methyl-carbamic acid 1-[3-(acetylmethylamino)-pyrrolidin-1-ylmethyl]-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydro-quinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}ethyl ester
Following the procedure of Example 10 with the substitution of 3-(N-acetyl-N-methylamino)pyrrolidine for piperazine N-methylsulfonamide, the title compound was prepared. (m/z): [M+H]+ calcd for C32H46N6O5, 595.36; found 595.4. Retention time (anal. HPLC: 5-65% MeCN/H2O over 4 min)=2.63 min.
Example 13
Synthesis of methyl-carbamic acid 1-(4-acetylpiperazin-1-ylmethyl)-2-{(1S,3R,5R))-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}ethyl ester
Following the procedure of Example 10 with the substitution of N-acetylpiperazine for piperazine N-methylsulfonamide, the title compound was prepared. (m/z): [M+H]+ calcd for C31H44N6O5, 581.35; found 581.2. Retention time (anal. HPLC: 5-65% MeCN/H2O over 4 min)=2.20 min.
Example 14
Synthesis of methyl-carbamic acid (R)-2-{(1S,3R,5R)3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo-[3.2.1]oct-8-yl}-1-(4-methanesulfonylpiperazin-1-ylmethyl)ethyl ester
Methyl isocyanate (41 mg, 7.1 mmol) was added to a solution of 1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(R)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide (Example 9) (400 mg, 0.71 mmol) in toluene (10 mL). The reaction mixture was capped and shaken in a heating block at 110° C. for 16 h. The reaction mixture was concentrated under vacuum, diluted with 50% aqueous acetic acid (7.5 mL) and purified by preparative HPLC (5-10-40% gradient) to afford the title compound (110 mg) as a white solid. (m/z): [M+H]+ calcd for C30H44N6O6S, 617.31; found 617.4. Retention time (anal. HPLC: 10-70% MeCN/H2O over 6 min)=2.40 min.
Example 15
Compounds of the Invention
Using the procedures of Examples 1-14 and variations thereof, the compounds of Tables I to XXVIII were prepared and characterized by mass spectrometry. In tables containing compounds prepared as pure stereoisomers, the chirality at the carbon atom marked with an asterisk is indicated in the column headed by an asterisk. In the compounds of Tables I to XXVIII, the quinolinone-carboxamide group is in the endo configuration with respect to the azabicyclooctane group.







TABLE I













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R9
Formula
calcd
found

















1
H
OH
H
2-furanyl
C32H45N5O5
580.35
580.3


2
H
OH
H
CH3
C29H41N5O4
524.33
524.4


3
H
OH
CH3
CH3
C30H43N5O4
538.34
538.4


4
H
OCH3
H
CH3
C30H43N5O4
538.34
538.4


5
H
OC(O)N(CH3)2
H
2-furanyl
C35H50N6O6
651.39
651.4


6
H
OC(O)N(CH3)2
H
CH3
C32H46N6O5
595.36
595.4


7
H
OC(O)N(CH3)2
H
CH3
C31H44N6O5
581.35
581.2


8
CH3
OH
H
2-furanyl
C33H47N5O5
594.37
594.4


9
CH3
OH
H
CH3
C30H43N5O4
538.34
538.4


10
F
OH
H
CH3
C29H4FN5O4
542.32
542.2


11
F
OH
H
2-furanyl
C32H44FN5O5
598.34
598.4
















TABLE II













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R10
*
Formula
calcd
found


















1
H
OH
H
CH3

C28H41N5O5S
560.29
560.2


2
H
OH
H
C2H5

C29H43N5O5S
574.31
574.2


3
H
OH
H
CH2cyclolohexyl

C34H51N5O5S
642.37
642.4


4
H
OH
H
CH(CH3)2

C30H45N5O5S
588.32
588.4


5
H
OCH3
H
CH3

C29H43N5O5S
574.31
574.5


6
H
OH
H
CH2SO2CH3

C29H43N5O7S2
638.27
638.2


7
H
OH
H
CH3
R
C28H41N5O5S
560.29
560.5


8
H
OH
H
CH3
S
C28H41N5O5S
560.29
560.5


9
Br
OH
H
CH3
S
C28H40BrN5O5S
638.20
638.0


10
H
OC(O)N(CH3)2
CH3
CH3

C31H46N6O6S
631.33
631.2


11
H
OCH3
H
CH2SO2CH3

C30H45N5O7S2
652.29
652.2


12
H
OH
H
CH2CF3

C29H40F3N5O5S
628.28
628.2


13
H
OC(O)NHCH3
H
CH3

C30H44N6O6S
617.31
617.2


14
H
OC(O)NHCH3
H
CH3
S
C30H44N6O6S
617.31
617.4


15
H
OC(O)NHCH3
H
CH3
R
C30H44N6O6S
617.31
617.4


16
CH3
OH
H
CH3

C29H43N5O5S
574.31
574.4


17
F
OH
H
CH3

C28H40FN5O5S
578.28
578.2


18
H
CH2OH
H
CH3

C29H43N5O5S
574.31
574.5
















TABLE III













 



















[M +






Molecular
[M + H]+
H]+


No.
R1
R3
R4
Formula
calcd
found





1
H
OH
H
C27H38N4O5S
531.27
531.3


2
H
OCH3
H
C28H40N4O5S
545.28
545.2


3
H
OC(O)N(CH3)2
H
C30H43N5O6S
602.30
602.2


4
H
OC(O)NHCH3
H
C32H46N6O5
595.36
595.4


5
CH3
OH
H
C28H40N4O5S
545.28
545.2


6
F
OCH3
H
C27H37FN4O5S
549.26
549.2


7
H
CH2OH
H
C28H40N4O5S
545.28
545.3
















TABLE IV













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R12
Formula
calcd
found





1
H
OH
H
C2H5
C30H43N5O5
554.34
554.3


2
H
OH
H
CH3
C29H41N5O5
540.32
540.4


3
H
OH
CH3
CH3
C30H43N5O5
554.34
554.2


4
H
OCH3
H
CH3
C30H43N5O5
554.34
554.2


5
H
OC(O)N(CH3)2
H
CH3
C32H46N6O6
611.36
611.4


6
H
OC(O)NHCH3
H
CH3
C31H44N6O6
597.34
597.2
















TABLE V













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R13
R14
Formula
calcd
found


















1
H
OH
H
CH3
CH3
C30H44N6O4
553.35
553.2


2
H
OCH3
H
CH3
CH3
C31H46N6O4
567.37
567.4


3
H
OC(O)N(CH3)2
H
CH3
CH3
C33H49N7O5
624.39
624.4


4
H
OC(O)NHCH3
H
CH3
CH3
C32H47N7O5
610.37
610.4


5
H
OC(O)NHCH3
H
CH3
H
C31H45N7O5
596.36
596.2


6
H
OH
H
H
H
C28H40N6O4
525.32
525.2


7
H
OH
H
CH3
H
C29H42N6O4
539.34
539.2


8
CH3
OH
H
CH3
CH3
C31H46N6O4
567.37
567.4


9
F
OH
H
CH3
CH3
C30H43FN6O4
571.34
571.4


10
F
OH
H
CH3
H
C29H41FN6O4
557.31
557.2
















TABLE VI













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R13
R14
Formula
calcd
found





1
H
OH
H
CH3
CH3
C29H44N6O5S
589.32
589.4


2
H
OCH3
H
CH3
CH3
C30H46N6O5S
603.34
603.4


3
H
OC(O)N(CH3)2
H
CH3
CH3
C32H49N7O6S
660.36
660.2


4
H
OC(O)NHCH3
H
CH3
CH3
C31H47N7O6S
646.34
646.4


5
CH3
OH
H
CH3
CH3
C30H46N6O5S
603.34
603.4


6
F
OCH3
H
CH3
CH3
C29H43FN6O5S
607.31
607.2
















TABLE VII













 























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R8
R9
*
Formula
calcd
found



















1
H
OH
H
CH3
CH3

C30H43N5O4
538.34
538.3


2
H
OH
H
H
CH3
R
C29H40N5O4
524.33
524.4


3
H
OH
H
C2H5
CH3

C31H45N5O4
552.36
552.4


4
H
OCH3
H
CH3
CH3

C31H45N5O4
552.36
552.3


5
H
OH
H
H
CF3
R
C29H38F3N5O4
578.30
578.2


6
H
OH
H
H
CF3

C29H38F3N5O4
578.30
578.2


7
H
OH
H
H
CH3

C29H41N5O4
524.33
524.4


8
H
OH
CH3
C2H5
CH3

C32H47N5O4
566.37
566.4


9
H
OH
H
H
CH(OH)CH3

C30H43N5O5
554.34
554.4


10
H
OCH3
H
H
CF3
S
C30H40F3N5O4
592.31
592.2


11
H
OC(O)N(CH3)2
H
C2H5
CH3

C34H50N6O5
623.39
623.4


12
H
OC(O)NHCH3
H
CH3
CH3

C32H46N6O5
595.36
595.4


13
CH3
OH
H
CH3
CH3

C31H45N5O4
552.36
552.4


14
CH3
OH
H
H
CH3

C30H43N5O4
538.34
538.4


15
F
OH
H
CH3
CH3

C30H42FN5O4
556.33
556.2
















TABLE VIII













 

























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R6a
R8
R10
*
Formula
calcd
found




















1
H
OH
H
H
H
CH3
R
C28H41N5O5S
560.29
560.2


2
H
OH
H
H
H
C2H5
R
C29H43N5O5S
574.31
574.3


3
H
OH
H
H
H
CH(CH3)2
R
C30H45N5O5S
588.32
588.2


4
H
OH
H
H
H
CH2SO2CH3
R
C29H43N5O7S2
638.27
638.2


5
H
OH
H
H
H
CH2cyclohexyl
R
C34H51N5O5S
642.37
642.3


6
H
OH
H
H
CH3
CH3

C29H43N5O5S
574.31
574.2


7
H
OH
H
H
H
CH3

C28H41N5O5S
560.29
560.2


8
H
OCH3
H
H
CH3
CH3

C30H45N5O5S
588.32
588.4


9
H
OC(O)N(CH3)2
H
H
CH3
CH3

C32H48N6O6S
645.35
645.4


10
H
OH
H
(S)-
CH3
CH3
S
C29H43N5O6S
590.30
590.2






OH

















TABLE IX













 

























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R6a, R7a
R13
R14
*
Formula
calcd
found




















1
H
OH
H
H, H
H
H
R
C28H39N5O4
510.31
510.3


2
H
OH
H
H, H
CH3
CH3
S
C30H43N5O4
538.34
538.3


3
H
OH
H
F, F
C2H5
C2H5
S
C32H45F2N5O4
602.35
602.4


4
H
OH
H
H, H
H
H
S
C28H39N5O4
510.31
510.4


5
H
OCH3
H
H, H
H
H
R
C29H41N5O4
524.33
524.5


6
H
OH
CH3
H, H
H
H
R
C29H41N5O4
524.33
524.4


7
H
OH
CH3
H, H
CH3
CH3
R
C31H45N5O4
552.36
552.4


8
H
OC(O)N(CH3)2
H
H, H
H
H
R
C31H44N6O5
581.35
581.4


9
H
OC(O)N(CH3)2
H
H, H
CH3
CH3
S
C33H48N6O5
609.38
609.4


10
H
OC(O)NHCH3
H
H, H
CH3
CH3
R
C32H46N6O5
595.36
595.4


11
CH3
OH
H
H, H
H
H
S
C29H41N5O4
524.33
524.4


12
CH3
OH
H
H, H
H
H
R
C29H41N5O4
524.33
524.4


13
F
OH
H
H, H
H
H
R
C28H38FN5O4
528.30
528.2


14
F
OH
H
H, H
H
H
S
C28H38FN5O4
528.30
528.2
















TABLE X













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R6a
X
*
Formula
calcd
found


















1
H
OH
H
NHC(O)OCH3

C29H41N5O5
540.32
540.4


2
H
OH
H
N(CH3)C(O)OCH3

C30H43N5O5
554.34
554.2


3
H
OH
(S) OH
N(CH3)C(O)OCH3
S
C30H43N5O6
570.33
570.4


4
H
OH
H
OC(O)N(CH3)2

C30H43N5O5
554.34
554.2


5
F
OH
H
OC(O)N(CH3)2

C30H42FN5O5
572.33
572.2


6
H
OH
H
NHSO2N(CH3)2
R
C29H44N6O5S
589.32
589.3


7
H
OH
H
N(CH3)SO2N(CH3)2

C30H46N6O5S
603.34
603.2


8
H
OH
H
NHSO2N(CH3)2

C29H44N6O5S
589.32
589.2


9
H
OH
H
NHC(O)N(CH3)2

C30H44N6O4
553.35
553.4


10
H
OH
H
N(CH3)C(O)N(CH3)2

C30H44N6O4
553.35
553.4


11
H
OCH3
H
N(CH3)C(O)N(CH3)2

C32H48N6O4
581.38
581.4


12
H
OH
(S) OH
N(CH3)C(O)N(CH3)2
S
C31H46N6O5
583.36
583.4


13
CH3
OH
H
N(CH3)C(O)N(CH3)2

C32H48N6O4
581.38
581.4


14
F
OH
H
N(CH3)C(O)N(CH3)2

C31H45FN6O4
585.36
585.4


15
H
OH
H
NH2
S
C29H43N5O3
510.35
510.3


16
H
OH
H
NH2
R
C29H43N5O3
510.35
510.3


17
H
OH
H
2-pyridinyl

C32H41N5O3
544.33
544.4


18
H
OH
H
1,1-dioxo-

C30H43N5O5S
586.31
586.3






isothiazolidin-2-yl

















TABLE XI













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R15
*
Formula
calcd
found





1
H
OH
H
H
S
C28H40N4O4
497.31
497.3


2
H
OH
H
CH3
S
C29H42N4O4
511.33
511.3


3
H
OC(O)N(CH3)2
H
H
S
C31H45N5O5
568.35
568.4


4
H
OC(O)N(CH3)2
H
CH3
S
C32H47N5O5
582.37
582.4
















TABLE XII













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
X
Formula
calcd
found





1
H
OH
H
NHSO2CH3
C29H43N5O5S
574.31
574.3


2
H
OH
H
NHSO2C2H5
C30H45N5O5S
588.32
588.3


3
H
OH
H
NHSO2CH2SO2CH3
C30H45N5O7S2
652.29
652.2


4
H
OH
H
NHC(O)OCH3
C30H43N5O5
554.34
554.4


5
F
OH
H
NHSO2N(CH3)2
C30H46N6O5S
603.34
603.3


6
H
OH
H
NHC(O)N(CH3)2
C31H46N6O4
567.37
567.4


7
H
OH
H
NHSO2N(CH3)2
C31H48N6O5S
617.35
617.4
















TABLE XIII













 























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R6a, R7a
R13
R14
Formula
calcd
found





1
H
OH
H
F, F
C2H5
C2H5
C33H47F2N5O4
616.37
616.4


2
H
OH
H
H, H
H
H
C29H41N5O4
524.33
524.2


3
H
OCH3
H
H, H
H
H
C30H43N5O4
538.34
538.4


4
H
OC(O)N(CH3)2
H
H, H
C2H5
C2H5
C36H54N6O5
651.43
651.4


5
H
OC(O)N(CH3)2
H
H, H
H
H
C32H46N6O5
595.36
595.4


6
CH3
OH
H
H, H
H
H
C30H43N5O4
538.34
538.4


7
F
OH
H
H, H
H
H
C29H40FN5O4
542.32
542.2


8
H
CH2OH
H
H, H
H
H
C30H43N5O4

















TABLE XIV













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R8
R9
Formula
calcd
found





1
H
OH
H
H
CH3
C30H43N5O4
538.34
538.4


2
H
OH
H
CH3
CH3
C31H45N5O4
552.36
552.4


3
H
OCH3
H
CH3
CH3
C32H47N5O4
566.37
566.4


4
H
OC(O)N(CH3)2
H
CH3
CH3
C34H50N6O5
623.39
623.4


5
CH3
OH
H
CH3
CH3
C32H47N5O4
566.37
566.4


6
F
OH
H
CH3
CH3
C31H44FN5O4
570.35
570.4
















TABLE XV













 























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R8
R10
*
Formula
calcd
found





1
H
OH
H
H
CH3
S
C29H43N5O5S
574.31
574.2


2
H
OH
H
H
C2H5
S
C30H45N5O5S
588.32
588.3


3
H
OH
H
H
CH2SO2CH3
S
C30H45N5O7S2
652.29
652.2


4
H
OH
H
CH3
CH3

C30H45N5O5S
588.32
588.4


5
H
OH
H
H
CH(CH3)2
S
C31H47N5O5S
602.34
602.2


6
CH3
OH
H
CH3
CH3

C31H47N5O5S
602.34
602.4


7
F
OH
H
CH3
CH3

C30H44FN5O5S
606.31
606.2
















TABLE XVI













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
X
*
Formula
calcd
found


















1
H
OH
H
N(CH3)SO2N(CH3)2
S
C30H46N6O5S
603.34
603.3


2
H
OH
H
NHSO2N(CH3)2

C31H48N6O5S
617.35
617.4


3
H
OH
H
NHC(O)N(CH3)2

C31H46N6O4
567.37
567.4


4
H
OH
H
N(CH3)C(O)N(CH3)2

C32H48N6O4
581.38
581.4


5
H
OH
H
NHC(O)OCH3

C30H43N5O5
554.34
554.4


6
H
OH
H
N(CH3)C(O)OCH3

C31H45N5O5
568.35
568.4


7
F
OH
H
N(CH3)C(O)OCH3

C31H44FN5O5
586.34
586.4


8
H
OH
H
OC(O)N(CH3)2

C31H45N5O5
568.35
568.4


9
H
OCH3
H
OC(O)N(CH3)2

C32H47N5O4
566.37
566.4


10
CH3
OH
H
OC(O)N(CH3)2

C32H47N5O5
582.37
582.4
















TABLE XVII













 























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R6a
R8
R10
Formula
calcd
found





1
H
OH
H
H
H
CH3
C30H45N5O5S
588.78
588.3


2
H
OH
H
OH
H
CH3
C30H45N5O6S
604.32
604.2


3
H
OH
H
H
CH3
CH3
C31H47N5O5S
602.34
602.3


4
H
OC(O)N(CH3)2
H
H
H
CH3
C33H50N6O6S
659.36
659.4


5
H
OC(O)NHCH3
H
H
H
CH3
C32H48N6O6S
645.35
645.4


6
CH3
OH
H
H
H
CH3
C31H47N5O5S
602.34
602.4


7
F
OH
H
H
H
CH3
C30H44FN5O5S
606.31
606.2
















TABLE XVIII













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
X
Formula
calcd
found

















1
H
OH
H
OH
C28H40N4O4
497.31
497.3


2
H
OH
H
pyrrolidin-1-yl-
C32H45N5O4
564.36
564.3






2-one


3
H
OH
H
C(O)NH2
C29H41N5O4
524.33
524.3


4
H
OH
H
pyrrolidin-1-yl
C32H47N5O3
550.38
550.4


5
H
OH
H
N(CH3)SO2CH3
C30H45N5O5S
588.32
588.3


6
H
OH
H
NHSO2CH3
C28H41N5O5S
560.29
560.5


7
H
OH
H
(CH2)2OH
C30H44N4O4
525.35
525.4


8
H
OC(O)N(CH3)2
H
OH
C31H45N5O5
568.35
568.4


9
H
OC(O)N(CH3)2
H
pyrrolidin-1-yl-
C35H50N6O5
635.39
635.4






2-one


10
H
CH2OH
H
OH
C29H42N4O4
511.33
511.5


11
H
OH2OH
H
N(CH3)SO2CH3
C31H47N5O5S
602.34
602.8
















TABLE XIX













 




















[M +
[M +







Molecular
H]+
H]+


No.
R1
R3
R4
X′
Formula
calcd
found





1
H
OH
H
(CH2)2OH
C30H44N4O4
525.35
525.4


2
H
OH
H
CH2OH
C29H42N4O4
511.33
511.4


3
H
OH
H
C(O)NH2
C29H41N5O4
524.33
525.2


4
H
OC(O)NHCH3
H
C(O)NH2
C31H44N6O5
581.35
581.4


5
H
OC(O)N(CH3)2
H
CH2OH
C32H47N5O5
582.37
582.4
















TABLE XX













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R16
Formula
calcd
found





1
H
OH
H
(CH2)2OH
C29H43N5O4
526.34
526.3


2
H
OH
H
(CH2)2O(CH2)2OH
C31H47N5O5
570.37
570.3


3
H
OH
H
CH2C(O)-4-morpholinyl
C33H48N6O
609.38
609.4


4
H
OH
H
4-pyridinyl
C32H42N6O3
559.34
559.3


5
H
OH
H
CH2-4-pyridinyl
C33H44H6O3
573.36
573.3


6
H
OH
H
CH2-2-tetrahydrofuranyl
C32H47N5O4
566.37
566.3


7
H
OH
H
(CH2)2-4-morpholinyl
C33H50N6O4
595.40
595.4


8
H
OH
H
CH2C(O)N(CH3)2
C31H46N6O4
567.37
567.3


9
H
OH
H
2-pyridinyl
C32H42N6O3
559.34
559.4
















TABLE XXI













 























Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R5
X′
*
Formula
calcd
found



















1
H
OH
H
CH3
NSO2C2H5

C30H45N5O5S
588.32
588.2


2
H
OH
H
CH3
NSO2CH3

C29H43N5O5S
574.31
574.2


3
H
OH
H
CH3
NC(O)OCH3

C30H43N5O5
554.34
554.4


4
H
OH
H
CH3
NC(O)N(CH3)2

C31H46N6O4
567.37
567.6


5
H
OCH3
H
CH3
NC(O)N(CH3)2

C32H48N6O4
581.38
581.4


6
H
OH
H
CH3
NC(O)CH3

C30H43N5O4
538.34
538.2


7
H
OH
H
CH3
NSO2N(CH3)2

C30H46N6O5S
603.34
603.2


8
H
OC(O)NHCH3
H
CH3
NC(O)CH3

C32H46N6O6
611.36
611.4


9
CH3
OH
H
CH3
NSO2N(CH3)2

C31H45N5O4
552.36
552.4


10
CH3
OH
H
CH3
NSO2CH3
R
C30H45N5O5S
588.32
588.4


11
CH3
OH
H
CH3
NSO2CH3

C30H45N5O5S
588.32
588.4
















TABLE XXII













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R5
*
Formula
calcd
found





1
H
OH
H
CH3

C28H40N4O5S
545.28
545.2


2
H
OCH3
H
CH3

C29H42N4O5S
559.30
559.2


3
H
OC(O)N(CH3)2
H
CH3

C31H45N5O6S
616.32
616.2


4
H
OH
H
CH2CH2OH

C29H42N4O6S
575.29
575.2


5
H
OH
H
CH3
R
C29H43N5O5S
574.31
574.2


6
CH3
OH
H
CH3

C29H42N4O5S
559.30
559.2


7
F
OH
H
CH3

C28H39FN4O5S
563.27
563.2
















TABLE XXIII













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R5
V
Formula
calcd
found





1
H
OH
H
CH3
C(O)CH3
C31H45N5O4
552.36
552.4


2
H
OH
H
CH3
C(O)OCH3
C31H45N5O5
568.35
568.4


3
H
OH
H
CH3
SO2CH3
C30H45N5O5S
588.32
588.4


4
H
OH
H
CH3
C(O)N(CH3)2
C32H48N6O4
581.38
581.4


5
H
OH
H
CH3
SO2N(CH3)2
C31H48N6O5S
617.35
617.4
















TABLE XXIV













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R5
Formula
calcd
found





1
H
OH
H
CH3
C29H42N4O5S
559.30
559.2


2
CH3
OH
H
CH3
C30H44N4O5S
573.31
573.4


3
F
OH
H
CH3
C29H41FN4O5S
577.29
577.2
















TABLE XXV













 



















[M +






Molecular
[M + H]+
H]+


No.
R1
R3
X′
Formula
calcd
found





1
H
OH
NSO2CH3
C29H43N5O5S
574.31
574.7


2
H
OH
NC(O)CH3
C30H43N5O4
538.34
538.2


3
CH3
OH
NC(O)CH3
C31H45N5O4
552.36
552.4


4
CH3
OH
NSO2CH3
C30H45N5O5S
588.32
588.4


5
F
OH
NC(O)CH3
C30H42FN5O4
556.33
556.4


6
F
OH
NSO2CH3
C29H42FN5O5S
592.30
592.2
















TABLE XXVI













 





















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
R5
Z
Formula
calcd
found


















1
H
OH
H
CH3
(CH2)3NHSO2—CH3
C28H43N5O5S
562.31
562.3


2
H
OH
H
CH3
CH2CH2OH
C26H38N4O4
471.30
471.3


3
H
OH
H
CH3
(CH2)2N(CH3)2
C28H43N5O3
498.35
498.3


4
H
OH
H
CH3
CH2C(O)N—(CH3)2
C28H41N5O4
512.33
512.3


5
H
OH
H
CH3
(CH2)2-2-
C31H41N5O3
532.33
532.3







pyridinyl


6
H
OH
H
CH3
(CH2)2CN
C27H37N5O3
480.30
480.2


7
H
OH
H
CH3
CH2C(O)NH2
C26H37N5O4
484.29
484.2


8
H
OH
H
CH2CH2OH
CH2CH2OH
C27H40N4O5
501.31
501.4


9
H
OH
H
CH2CH2OCH3
CH2CH2OCH3
C29H44N4O5
529.34
529.4


10
H
OH
H
CH2CH3
CH2-4-pyridinyl
C31H41N5O3
532.33
532.4


11
H
OH
H
CH3
(CH2)2-3-indolyl
C34H43N5O3
570.35
570.4


12
H
OH
H
CH3
(CH2)2SO2CH3
C27H40N4O5S
533.28
533.2


13
H
OH
H
CH3
CH2CN
C27H36N4O3
465.29
465.2


14
H
OH
H
CH3
(CH2)2OCH3
C27H40N4O4
485.31
485.2


15
H
OH
H
CH3
CH2CN
C25H33N5O3
452.27
452.0


16
H
OH
H
CH2CN
CH2CN
C27H34N6O3
491.28
491.4


17
H
OH
H
CH3
(CH2)2CN
C28H39N5O3
494.32
494.3


18
H
OH
H
CH3
(CH2)2N(CH3)—C(O)N(CH3)2
C30H46N6O4
555.37
555.4


19
H
OH
H
CH3
(CH2)2N(CH3)—C(O)OCH3
C29H41N5O5
542.34
542.4


20
H
OH
H
CH2CH2OH
(CH2)2N(CH3)—SO2CH3
C29H44N5O6S
592.32
592.4


21
H
OH
H
CH2CH2OCH3
(CH2)2N(CH3)—SO2CH3
C30H47N5O6S
606.33
606.4


22
H
OH
H
CH3
(CH2)2NHSO2—CH3
C27H41N5O5S
548.29
548.4


23
H
OH
H
H
(CH2)2NHSO2—CH3
C26H39N5O5S
534.28
534.2


24
H
OH
H
CH3
(CH2)2N(CH3)—SO2CH3
C28H43N5O5S
562.31
562.2


25
H
OH
H
H
(S)-CH2-2-
C28H40N4O4
497.31
497.2







tetrahydrofuranyl


26
H
OH
H
H
(CH2)2OCH3
C26H38N4O4
471.30
471.2


27
H
OH
H
H
CH2CF3
C25H33F3N4O3
495.26
495.2


28
H
OH
H
H
(CH2)3-1-
C29H40N6O3
521.33
521.2







imidazolyl


29
H
OH
H
H
(CH2)2SCH2CH3
C27H40N4O3S
501.29
501.2


30
H
OH
H
H
CH2CN
C26H34N4O3
451.27
451.2


31
H
OH
H
H
(CH2)2-3-indolyl
C33H41N5O3
556.33
556.2


32
H
OH
H
H
(CH2)2OCH2CH2OH
C27H40N4O5
501.31
501.2


33
H
OH
H
H
CH2CH(OH)CH2OH
C26H38N4O5
487.29
487.2


34
H
OH
H
H
(S)-
C27H38N4O6
515.29
515.2







CH[(CH2)2OH]—C(O)OH


35
H
OH
H
H
(S)-
C26H36N4O6
501.27
501.2







CH[CH2OH]C(O)OH


36
H
OH
H
H
(CH2)3-
C30H43N5O4
538.34
538.2







pyrrolidin-1-yl-







2-one


37
H
OH
H
H
C(CH3)(CH2OH)
C27H40N4O5
501.31 
501.2







(CH2OH)


38
H
OH
H
H
(R)-CH2-2-
C28H40N4O4
497.31
497.2







tetrahydrofuranyl


39
H
OH
H
H
(R)-
C27H38N4O6
515.29
515.2







CH[(CH2)2OH]—C(O)OH


40
H
OH
H
CH3
(CH2)2N(CH3)—SO2N(CH3)2
C29H46N6O5S
591.34
591.2


41
H
OH
CH3
CH3
CH2CH2OCH3
C28H42N4O4
499.33
499.4


42
H
OH
CH3
CH3
(CH2)2NHSO2—CH3
C28H43N5O5S
562.31
562.2


43
H
OCH3
H
CH2CH2OH
(CH2)2N(CH3)—SO2CH3
C30H47N5O6S
606.33
606.2


44
H
OCH3
H
CH3
CH2C(O)N—(CH3)2
C29H43N5O4
526.34
526.4


45
H
OCH3
H
CH2CH2OCH3
CH2CH2OCH3
C30H46N4O5
543.36
543.4


46
H
(a)
H
CH3
CH2C(O)N—(CH3)2
C31H46N6O5
583.36
583.4


47
H
(a)
H
CH2CH2OCH3
CH2CH2OCH3
C32H49N5O6
600.38
600.4


48
H
(a)
H
CH3
CH2CH2OH
C29H43N5O5
542.34
542.2


49
H
(a)
H
CH3
CH2CH2OCH3
C30H45N5O5
556.35
556.4


50
H
OH
H
CH2CH2OH
(CH2)2SO2CH3
C28H42N4O6S
563.29
563.2


51
H
OH
H
CH2CH2OCH3
(CH2)2SO2CH3
C29H44N4O6S
577.31
577.2


52
H
(b)
H
CH2CH2OCH3
(CH2)2SO2CH3
C31H47N5O7S
634.33
634.4


53
H
(b)
H
CH3
(CH2)2SO2CH3
C29H43N5O6S
590.30
590.2


54
H
(S)-OH
H
CH2CN
CH2CN
C31H44N6O5
581.35
581.2


55
H
OH
H
CH3
(CH2)2-1,1-dioxo-
C29H43N5O5S
574.31
574.3







isothiazolidin-2-yl


56
CH3
OH
H
CH3
(CH2)2N(CH3)C(O)OCH3
C30H45N5O5
556.35
556.4


57
CH3
OH
H
CH3
(CH2)2NHSO2CH3
C28H43N5O5S
562.31
562.2


58
CH3
OH
H
CH3
(CH2)2N(CH3)—SO2CH3
C29H45N5O5S
576.32
576.4


59
CH3
OH
H
CH2CH2OCH3
(CH2)2N(CH3)—SO2CH3
C31H49N5O6S
620.35
620.4


60
CH3
OH
H
CH2CH2OH
(CH2)2SO2CH3
C29H44N4O6S
577.31
577.2


61
CH3
OH
H
CH3
(CH2)2-1,1-dioxo-
C30H45N5O5S
588.32
588.4







isothiazolidin-2-yl


62
F
OH
H
CH3
CH2C(O)N—(CH3)2
C28H40FN5O4
530.32
530.2


63
F
OH
H
CH3
(CH2)2NHSO2—CH3
C27H40FN5O5S
566.28
566.2


64
F
OH
H
CH3
(CH2)2N(CH3)—C(O)OCH3
C29H45FN5O5
560.33
560.2


65
F
OH
H
CH3
(CH2)2N(CH3)—SO2CH3
C28H42FN5O5S
580.30
580.2


66
F
OH
H
CH2CH2OCH3
(CH2)2N(CH3)—SO2CH3
C30H46FN5O6S
624.33
624.2


67
F
OH
H
CH2CH2OH
(CH2)2SO2CH3
C28H41FN4O6S
581.28
581.2





(a) OC(O)N(CH3)2


(b) OC(O)NHCH3













TABLE XXVII













 

















[M +





Molecular
[M + H]+
H]+


No.
R1
Z
Formula
calcd
found















1
H
(CH2)2CH2OH
C27H38N4O4
483.30
483.2


2
H
(CH2)2OCH3
C28H40N4O4
497.31
497.3


3
H
(CH2)2-2-pyrrolyl
C31H41N5O3
532.33
532.3


4
H
CH2-3-pyridinyl
C31H39N5O3
530.32
530.3


5
H
(CH2)2NHC(O)OCH3
C29H41N5O5
540.32
540.3


6
H
(CH2)2OC(O)N(CH3)2
C30H43N5O5
554.34
554.3


7
H
(CH2)2C(O)NHC2H5
C30H43N5O4
538.34
538.3


8
H
(CH2)3C(O)N(CH3)2
C31H45N5O4
552.36
552.3


9
H
(CH2)2NHSO2CH3
C28H41N5O5S
560.29
560.3


10
H
(CH2)2N(CH3)SO2CH3
C29H43N5O5S
574.31
574.3


11
H
(CH2)3SO2N(CH3)2
C30H45N5O5S
588.32
588.3


12
H
CH2CF3
C27H35F3N4O3
521.28
521.2


13
H
(CH2)2C(O)NH2
C28H39N5O4
510.31
510.2


14
H
CH2CN
C27H35N5O3
478.28
478.2


15
H
CH2C(O)NH2
C27H37N5O4
496.29
496.2


16
H
CH2C(O)N(CH3)2
C29H41N5O4
524.33
524.2
















TABLE XXVIII













 



















Molecular
[M + H]+
[M + H]+


No.
R1
R3
R4
W
Formula
calcd
found





1
H
OH
H
2-CH2NHSO2CH3
C29H43N5O6S
590.30
590.2


2
H
OH
H
3-CH2N(CH3)SO2CH3
C30H45N5O6S
604.32
604.2


3
H
OH
CH3
2-CH2NHSO2CH3
C30H45N5O6S
604.32
604.2


4
H
OH
H
3-CH2OH
C28H40N4O5
513.31
513.2


5
H
OCH3
H
3-CH2OH
C29H42N4O5
527.33
527.2


6
H
OC(O)N(CH3)2
H
3-CH2N(CH3)SO2CH3
C33H50N6O7S
675.36
675.4


7
H
OC(O)N(CH3)2
H
3-CH2OH
C31H45N5O6
584.35
584.2









Example 16
Radioligand Binding Assay on 5-HT4(c) Human Receptors
a. Membrane Preparation 5-HT4(c) 
HEK-293 (human embryonic kidney) cells stably-transfected with human 5-HT4(c) receptor cDNA (Bmax= ̃6.0 pmol/mg protein, as determined using [3H]-GR113808 membrane radioligand binding assay) were grown in T-225 flasks in Dulbecco's Modified Eagles Medium (DMEM) containing 4,500 mg/L D-glucose and pyridoxine hydrochloride (GIBCO-Invitrogen Corp., Carlsbad Calif.: Cat #11965) supplemented with 10% fetal bovine serum (FBS) (GIBCO-Invitrogen Corp.: Cat #10437), 2 mM L-glutamine and (100 units) penicillin-(100 μg) streptomycin/ml (GIBCO-Invitrogen Corp.: Cat #15140) in a 5% CO2, humidified incubator at 37° C. Cells were grown under continuous selection pressure by the addition of 800 μg/mL geneticin (GIBCO-Invitrogen Corp.: Cat #10131) to the medium.
Cells were grown to roughly 60-80% confluency (<35 subculture passages). At 20-22 hours prior to harvesting, cells were washed twice and fed with serum-free DMEM. All steps of the membrane preparation were performed on ice. The cell monolayer was lifted by gentle mechanical agitation and trituration with a 25 mL pipette. Cells were collected by centrifugation at 1000 rpm (5 min).
For the membrane preparation, cell pellets were resuspended in ice-cold 50 mM 4-(2-hydroxyethyl)-1-piperazineethanesulphonic acid (HEPES), pH 7.4 (membrane preparation buffer) (40 mL/total cell yield from 30-40 T225 flasks) and homogenized using a polytron disrupter (setting 19, 2×10 s) on ice. The resultant homogenates were centrifuged at 1200 g for 5 min at 4° C. The pellet was discarded and the supernatant centrifuged at 40,000 g (20 min). The pellet was washed once by resuspension with membrane preparation buffer and centrifugation at 40,000 g (20 min). The final pellet was resuspended in 50 mM HEPES, pH 7.4 (assay buffer) (equivalent 1 T225 flask/1 mL). Protein concentration of the membrane suspension was determined by the method of Bradford (Bradford, 1976). Membranes were stored frozen in aliquots at −80° C.
b. Radioligand Binding Assays
Radioligand binding assays were performed in 1.1 mL 96-deep well polypropylene assay plates (Axygen) in a total assay volume of 400 μL containing 2 μg membrane protein in 50 mM HEPES pH 7.4, containing 0.025% bovine serum albumin (BSA). Saturation binding studies for determination of Kd values of the radioligand were performed using [3H]-GR113808 (Amersham Inc., Bucks, UK: Cat #TRK944; specific activity  ̃82 Ci/mmol) at 8-12 different concentrations ranging from 0.001 nM−5.0 nM. Displacement assays for determination of pKi values of compounds were performed with [3H]-GR113808 at 0.15 nM and eleven different concentrations of compound ranging from 10 pM−100 μM.
Test compounds were received as 10 mM stock solutions in DMSO and diluted to 400 μM into 50 mM HEPES pH 7.4 at 25° C., containing 0.1% BSA, and serial dilutions (1:5) then made in the same buffer. Non-specific binding was determined in the presence of 1 μM unlabeled GR113808. Assays were incubated for 60 min at room temperature, and then the binding reactions were terminated by rapid filtration over 96-well GF/B glass fiber filter plates (Packard BioScience Co., Meriden, Conn.) presoaked in 0.3% polyethyleneimine. Filter plates were washed three times with filtration buffer (ice-cold 50 mM HEPES, pH7.4) to remove unbound radioactivity. Plates were dried, 35 μL Microscint-20 liquid scintillation fluid (Packard BioScience Co., Meriden, Conn.) was added to each well and plates were counted in a Packard Topcount liquid scintillation counter (Packard BioScience Co., Meriden, Conn.).
Binding data were analyzed by nonlinear regression analysis with the GraphPad Prism Software package (GraphPad Software, Inc., San Diego, Calif.) using the 3-parameter model for one-site competition. The BOTTOM (curve minimum) was fixed to the value for nonspecific binding, as determined in the presence of 1 μM GR113808. Ki values for test compounds were calculated, in Prism, from the best-fit IC50 values, and the Kd value of the radioligand, using the Cheng-Prusoff equation (Cheng and Prusoff, Biochemical Pharmacology, 1973, 22, 3099-108): Ki=IC50/(1+[L]/Kd) where [L]=concentration [3H]-GR113808. Results are expressed as the negative decadic logarithm of the Ki values, pKi.
Test compounds having a higher pKi value in this assay have a higher binding affinity for the 5-HT4 receptor. The compounds of the invention which were tested in this assay had a pKi value ranging from about 6 to about 9.
Example 17
Radioligand Binding Assay on 5-HT3A Human Receptors Determination of Receptor Subtype Selectivity
a. Membrane Preparation 5-HT3A 
HEK-293 (human embryonic kidney) cells stably-transfected with human 5-HT3A receptor cDNA were obtained from Dr. Michael Bruess (University of Bonn, GDR) (Bmax= ̃9.0 pmol/mg protein, as determined using [3H]-GR65630 membrane radioligand binding assay). Cells were grown in T-225 flasks or cell factories in 50% Dulbecco's Modified Eagles Medium (DMEM) (GIBCO-Invitrogen Corp., Carlsbad, Calif.: Cat #11965) and 50% Ham's F12 (GIBCO-Invitrogen Corp.: Cat #11765) supplemented with 10% heat inactivated fetal bovine serum (FBS) (Hyclone, Logan, Utah: Cat #SH30070.03) and (50 units) penicillin-(50 μg) streptomycin/ml (GIBCO-Invitrogen Corp.: Cat #15140) in a 5% CO2, humidified incubator at 37° C.
Cells were grown to roughly 70-80% confluency (<35 subculture passages). All steps of the membrane preparation were performed on ice. To harvest the cells, the media was aspirated and cells were rinsed with Ca2+, Mg2+-free Dulbecco's phosphate buffered saline (dPBS). The cell monolayer was lifted by gentle mechanical agitation. Cells were collected by centrifugation at 1000 rpm (5 min). Subsequent steps of the membrane preparation followed the protocol described above for the membranes expressing 5-HT4(c) receptors.
b. Radioligand Binding Assays
Radioligand binding assays were performed in 96-well polypropylene assay plates in a total assay volume of 200 μL containing 1.5-2 μg membrane protein in 50 mM HEPES pH 7.4, containing 0.025% BSA assay buffer. Saturation binding studies for determination of Kd values of the radioligand were performed using [3H]-GR65630 (PerkinElmer Life Sciences Inc., Boston, Mass.: Cat #NET1011, specific activity  ̃85 Ci/mmol) at twelve different concentrations ranging from 0.005 nM to 20 nM. Displacement assays for determination of pKi values of compounds were performed with [3H]-GR65630 at 0.50 μM and eleven different concentrations of compound ranging from 10 μM to 100 μM. Compounds were received as 10 mM stock solutions in DMSO (see section 3.1), diluted to 400 μM into 50 mM HEPES pH 7.4 at 25° C., containing 0.1% BSA, and serial (1:5) dilutions then made in the same buffer. Non-specific binding was determined in the presence of 10 μM unlabeled MDL72222. Assays were incubated for 60 min at room temperature, then the binding reactions were terminated by rapid filtration over 96-well GF/B glass fiber filter plates (Packard BioScience Co., Meriden, Conn.) presoaked in 0.3% polyethyleneimine. Filter plates were washed three times with filtration buffer (ice-cold 50 mM HEPES, pH7.4) to remove unbound radioactivity. Plates were dried, 35 μL Microscint-20 liquid scintillation fluid (Packard BioScience Co., Meriden, Conn.) was added to each well and plates were counted in a Packard Topcount liquid scintillation counter (Packard BioScience Co., Meriden, Conn.).
Binding data were analyzed using the non-linear regression procedure described above to determine Ki values. The BOTTOM (curve minimum) was fixed to the value for nonspecific binding, as determined in the presence of 10 μM MDL72222. The quantity [L] in the Cheng-Prusoff equation was defined as the concentration [3H]-GR65630.
Selectivity for the 5-HT4 receptor subtype with respect to the 5-HT3 receptor subtype was calculated as the ratio Ki(5-HT3A)/Ki(5-HT4(c)). The compounds of the invention which were tested in this assay had a 5-HT4/5-HT3 receptor subtype selectivity ranging from about 10 to about 8000.
Example 18
Whole-cell cAMP Accumulation Flashplate Assay with HEK-293 Cells Expressing Human 5-HT4(c) Receptors
In this assay, the functional potency of a test compound was determined by measuring the amount of cyclic AMP produced when HEK-293 cells expressing 5-HT4 receptors were contacted with different concentrations of test compound.
a. Cell Culture
HEK-293 (human embryonic kidney) cells stably-transfected with cloned human 5-HT4(c) receptor cDNA were prepared expressing the receptor at two different densities: (1) at a density of about 0.5-0.6 pmol/mg protein, as determined using a [3H]-GR113808 membrane radioligand binding assay, and (2) at a density of about 6.0 μmol/mg protein. The cells were grown in T-225 flasks in Dulbecco's Modified Eagles Medium (DMEM) containing 4,500 mg/L D-glucose (GIBCO-Invitrogen Corp.: Cat #11965) supplemented with 10% fetal bovine serum (FBS) (GIBCO-Invitrogen Corp.: Cat #10437) and (100 units) penicillin-(100 μg) streptomycin/ml (GIBCO-Invitrogen Corp.: Cat #15140) in a 5% CO2, humidified incubator at 37° C. Cells were grown under continuous selection pressure by the addition of geneticin (800 μg/mL: GIBCO-Invitrogen Corp.: Cat #10131) to the medium.
b. Cell Preparation
Cells were grown to roughly 60-80% confluency. Twenty to twenty-two hours prior to assay, cells were washed twice, and fed, with serum-free DMEM containing 4,500 mg/L D-glucose (GIBCO-Invitrogen Corp.: Cat #11965). To harvest the cells, the media was aspirated and 10 mL Versene (GIBCO-Invitrogen Corp.: Cat #15040) was added to each T-225 flask. Cells were incubated for 5 min at RT and then dislodged from the flask by mechanical agitation. The cell suspension was transferred to a centrifuge tube containing an equal volume of pre-warmed (37° C.) dPBS and centrifuged for 5 min at 1000 rpm. The supernatant was discarded and the pellet was re-suspended in pre-warmed (37° C.) stimulation buffer (10 mL equivalent per 2-3 T-225 flasks). This time was noted and marked as time zero. The cells were counted with a Coulter counter (count above 8 μm, flask yield was 1-2×107 cells/flask). Cells were resuspended at a concentration of 5×105 cells/ml in pre-warmed (37° C.) stimulation buffer (as provided in the flashplate kit) and preincubated at 37° C. for 10 min.
cAMP assays were performed in a radioimmunoassay format using the Flashplate Adenylyl Cyclase Activation Assay System with 125I-cAMP (SMP004B, PerkinElmer Life Sciences Inc., Boston, Mass.), according to the manufacturer's instructions.
Cells were grown and prepared as described above. Final cell concentrations in the assay were 25×103 cells/well and the final assay volume was 100 μL. Test compounds were received as 10 mM stock solutions in DMSO, diluted to 400 μM into 50 mM HEPES pH 7.4 at 25° C., containing 0.1% BSA, and serial (1:5) dilutions then made in the same buffer. Cyclic AMP accumulation assays were performed with 11 different concentrations of compound ranging from 10 pM to 100 μM (final assay concentrations). A 5-HT concentration-response curve (10 μM to 100 μM) was included on every plate. The cells were incubated, with shaking, at 37° C. for 15 min and the reaction terminated by addition of 100 μl of ice-cold detection buffer (as provided in the flashplate kit) to each well. The plates were sealed and incubated at 4° C. overnight. Bound radioactivity was quantified by scintillation proximity spectroscopy using the Topcount (Packard BioScience Co., Meriden, Conn.).
The amount of cAMP produced per mL of reaction was extrapolated from the cAMP standard curve, according to the instructions provided in the manufacturer's user manual. Data were analyzed by nonlinear regression analysis with the GraphPad Prism Software package using the 3-parameter sigmoidal dose-response model (slope constrained to unity). Potency data are reported as pEC50 values, the negative decadic logarithm of the EC50 value, where EC50 is the effective concentration for a 50% maximal response.
Test compounds exhibiting a higher pEC50 value in this assay have a higher potency for agonizing the 5-HT4 receptor. The compounds of the invention which were tested in this assay, for example, in the cell line (1) having a density of about 0.5-0.6 μmol/mg protein, had a pEC50 value ranging from about 6 to about 9.
Example 19
In vitro Voltage Clamp Assay of Inhibition of Potassium Ion Current in Whole Cells Expressing the hERG Cardiac Potassium Channel
CHO-K1 cells stably transfected with hERG cDNA were obtained from Gail Robertson at the University of Wisconsin. Cells were held in cryogenic storage until needed. Cells were expanded and passaged in Dulbecco's Modified Eagles Medium/F12 supplemented with 10% fetal bovine serum and 200 μg/mL geneticin. Cells were seeded onto poly-D-lysine (100 μg/mL) coated glass coverslips, in 35 mm2 dishes (containing 2 mL medium) at a density that enabled isolated cells to be selected for whole cell voltage-clamp studies. The dishes were maintained in a humidified, 5% CO2 environment at 37° C.
Extracellular solution was prepared at least every 7 days and stored at 4° C. when not in use. The extracellular solution contained (mM): NaCl (137), KCl (4), CaCl2 (1.8), MgCl2 (1), Glucose (10), 4-(2-hydroxyethyl)-1-piperazineethanesulphonic acid (HEPES) (10), pH 7.4 with NaOH. The extracellular solution, in the absence or presence of test compound, was contained in reservoirs, from which it flowed into the recording chamber at approximately 0.5 mL/min. The intracellular solution was prepared, aliquoted and stored at −20° C. until the day of use. The intracellular solution contained (mM): KCl (130), MgCl2 (1), ethylene glycol-bis(beta-aminoethyl ether) N,N,N′,N′-tetra acetic acid salt (EGTA) (5), MgATP (5), 4-(2-hydroxyethyl)-1-piperazineethanesulphonic acid (HEPES) (10), pH 7.2 with KOH. All experiments were performed at room temperature (20-22° C.).
The coverslips on which the cells were seeded were transferred to a recording chamber and perfused continuously. Gigaohm seals were formed between the cell and the patch electrode. Once a stable patch was achieved, recording commenced in the voltage clamp mode, with the initial holding potential at −80 mV. After a stable whole-cell current was achieved, the cells were exposed to test compound. The standard voltage protocol was: step from the holding potential of −80 mV to +20 mV for 4.8 sec, repolarize to −50 mV for 5 sec and then return to the original holding potential (−80 mV). This voltage protocol was run once every 15 sec (0.067 Hz). Peak current amplitudes during the repolarization phase were determined using pClamp software. Test compounds at a concentration of 3 μM were perfused over the cells for 5 minutes, followed by a 5-minute washout period in the absence of compound. Finally a positive control (cisapride, 20 nM) was added to the perfusate to test the function of the cell. The step from −80 mV to +20 mV activates the hERG channel, resulting in an outward current. The step back to −50 mV results in an outward tail current, as the channel recovers from inactivation and deactivates.
Peak current amplitudes during the repolarization phase were determined using pCLAMP software. The control and test article data were exported to Origin® (OriginLab Corp., Northampton Mass.) where the individual current amplitudes were normalized to the initial current amplitude in the absence of compound. The normalized current means and standard errors for each condition were calculated and plotted versus the time course of the experiment.
Comparisons were made between the observed K+ current inhibitions after the five-minute exposure to either the test article or vehicle control (usually 0.3% DMSO). Statistical comparisons between experimental groups were performed using a two-population, independent t-test (Microcal Origin v. 6.0). Differences were considered significant at p<0.05.
The smaller the percentage inhibition of the potassium ion current in this assay, the smaller the potential for test compounds to change the pattern of cardiac repolarization when used as therapeutic agents. For example, the compounds of Examples 1-14, which were tested in this assay at a concentration of 3 μM, exhibited an inhibition of the potassium ion current of less than about 25%, typically, less than about 15%.
Example 20
Pharmacokinetic Study in the Rat
Aqueous solution formulations of test compounds were prepared in 0.1% lactic acid at a pH of between about 5 and about 6. Male Sprague-Dawley rats (CD strain, Charles River Laboratories, Wilmington, Mass.) were dosed with test compounds via intravenous administration (IV) at a dose of 2.5 mg/kg or by oral gavage (PO) at a dose of 5 mg/kg. The dosing volume was 1 mL/kg for IV and 2 mg/kg for PO administration. Serial blood samples were collected from animals pre-dose, and at 2 (IV only), 5, 15, and 30 min, and at 1, 2, 4, 8, and 24 hours post-dose. Concentrations of test compounds in blood plasma were determined by liquid chromatography-mass spectrometry analysis (LC-MS/MS) (MDS SCIEX, API 4000, Applied Biosystems, Foster City, Calif.) with a lower limit of quantitation of 1 ng/mL.
Standard pharmacokinetic parameters were assessed by non-compartmental analysis (Model 201 for IV and Model 200 for PO) using WinNonlin (Version 4.0.1, Pharsight, Mountain View, Calif.). The maximum in the curve of test compound concentration in blood plasma vs. time is denoted Cmax. The area under the concentration vs. time curve from the time of dosing to the last measurable concentration (AUC(0−t)) was calculated by the linear trapezoidal rule. Oral bioavailability (F(%)), i.e. the dose-normalized ratio of AUC(0−t) for PO administration to AUC(0−t) for IV administration, was calculated as:

F(%)=AUCPO/AUCIV×DoseIV/DosePO×100%

Test compounds which exhibit larger values of the parameters Cmax, AUC(0−t), and F(%) in this assay are expected to have greater bioavailability when administered orally. For example, the compounds of Examples 1-14 were tested in this assay and had Cmax values typically ranging from about 0.05 to about 0.4 μg/mL and AUC(0−t) values typically ranging from about 0.15 to about 0.9 μg·hr/mL.
While the present invention has been described with reference to the specific embodiments thereof, it should be understood by those skilled in the art that various changes may be made and equivalents may be substituted without departing from the true spirit and scope of the invention. In addition, many modifications may be made to adapt a particular situation, material, composition of matter, process, process step or steps, to the objective, spirit and scope of the present invention. All such modifications are intended to be within the scope of the claims appended hereto. Additionally, all publications, patents, and patent documents cited hereinabove are incorporated by reference herein in full, as though individually incorporated by reference.

## Claims

1. A pharmaceutical composition comprising a pharmaceutically-acceptable carrier and a compound of formula (I):




wherein:
R1 is hydrogen, halo, hydroxy, C1-4alkyl, or C1-4alkoxy;
R2 is C3-4alkyl or C3-6cycloalkyl;
R3 is hydroxy, C1-3alkoxy, hydroxy-substituted C1-4alkyl, or —OC(O)NRaRb;
R4 is hydrogen or C1-4alkyl;
X is selected from —N(R8)C(O)R9, —N(R8)S(O)2R10, —S(R11)O2, —N(R8)C(O)OR12, —N(R8)C(O)NR13R14, —N(R8)SO2NR13R14, —C(O)NR13R14, —OC(O)NR13R14, —C(O)OR12, —OR15, and cyano;
R5 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy, C1-3alkoxy, or cyano;
R6 and R7 are independently selected from hydrogen, hydroxy, halo, and C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy or C1-3alkoxy;
R8 is hydrogen or C1-4alkyl;
or R5 and R8, R5 and R6, or R6 and R8 taken together form C2-5alkylenyl, wherein C2-5alkylenyl is optionally substituted with hydroxy, halo, hydroxy-substituted C1-3alkyl, or C1-3alkoxy;
or R3 and R5 taken together form —OCH2CH2—;
or R5 and R6 taken together form —(CH2)q-Q-(CH2)q, wherein Q is oxygen or sulfur and q is independently 0, 1, or 2;
R9 is hydrogen, furanyl, or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy or with from 1 to 3 halo;
R10 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with —SO2Rc, C3-6cycloalkyl or with from 1 to 3 halo;
or R8 and R10 taken together form C3alkylenyl;
R11 is hydrogen, C1-4alkyl, or —NRbRc;
or R5 and R11 or R6 and R11 taken together form C2-5alkylenyl;
R12, R13, and R14 are independently hydrogen or C1-4alkyl;
R15 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy;
Ra, Rb, and Rc are independently hydrogen or C1-3alkyl; and
n is 1, 2, 3, or 4;
provided that when n is 1, X forms a carbon-carbon bond with the carbon atom bearing the substituents R6 and R7;
or a pharmaceutically-acceptable salt or stereoisomer thereof.

2. The pharmaceutical composition of claim 1 wherein:
R5 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy, C1-3alkoxy, or cyano;
R6 and R7 are independently selected from hydrogen, hydroxy, halo, and C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy or C1-3alkoxy;
R8 is hydrogen or C1-4alkyl;
R10 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with —SO2Rc, C3-6cycloalkyl or with from 1 to 3 halo;
R11 is hydrogen, C1-4alkyl, or —NRbRc; and
R15 is hydrogen or C1-4alkyl, wherein C1-4alkyl is optionally substituted with hydroxy.

3. The pharmaceutical composition of claim 1 wherein R2 is C3-4alkyl.

4. The pharmaceutical composition of claim 3 wherein n is 2 or 3.

5. The pharmaceutical composition of claim 1 wherein the compound of formula (I) is a compound of formula (II):




wherein:
R1 is hydrogen, halo, or C1-3alkyl;
R2 is C3-4alkyl;
R3 is hydroxy, C1-3alkoxy, hydroxy-substituted C1-2alkyl, or —OC(O)NRaRb;
R5 is hydrogen, C1-3alkyl, or C1-3alkyl substituted at the terminal position with hydroxy or cyano;
R6 is hydrogen;
X is selected from —N(R8)C(O)R9; —N(R8)S(O)2R10, —S(R11)O2, —N(R8)C(O)NR13R14, —C(O)NR13R14, —OC(O)NR13R14, —OR15, and cyano;
R8 is hydrogen or C1-3alkyl;
R9 is hydrogen or C1-3alkyl;
R10 is hydrogen or C1-3alkyl, wherein C1-3alkyl is optionally substituted with —SO2Rc wherein Rc is C1-3alkyl;
R13, R14, and R15 are independently hydrogen or C1-3alkyl;
or R5 and R8, R5 and R6, or R5 and R11 taken together form C2alkylenyl; or
a pharmaceutically-acceptable salt or stereoisomer thereof.

6. The pharmaceutical composition of claim 5 wherein:
R1 is hydrogen;
R2 is C3-4alkyl;
R3 is hydroxy, methoxy, hydroxymethyl, —OC(O)N(H)CH3, or —OC(O)N(CH3)2;
R6 is hydrogen;
X is selected from —N(R8)C(O)R9; —N(R8)S(O)2R10, —S(R11)O2, and —N(R8)C(O)NR13R14;
R5 and R8 taken together form C2alkylenyl;
R9 is hydrogen or C1-3alkyl;
R10 is hydrogen, C1-3alkyl, or methanesulfonylmethyl;
R5 and R11 taken together form C2alkylenyl; and
R13 and R14 are independently hydrogen or C1-3alkyl.

7. The pharmaceutical composition of claim 1 wherein the compound of formula (I) is a compound of formula (III):

8. The pharmaceutical composition of claim 1 wherein the compound of formula (I) is a compound of formula (IV):

9. The pharmaceutical composition of claim 1 wherein the compound of formula (I) is a compound of formula (V):

10. The pharmaceutical composition of claim 1 wherein the compound of formula (I) is a compound selected from:
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid ((1S,3R,5R)-8-{2-hydroxy-3-[4-(propane-2-sulfonyl)piperazin-1-yl]propyl}-8-azabicyclo[3.2.1]oct-3-yl)-amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(1,1-dioxo-1λ6-thiomorpholin-4-yl)-2-hydroxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(S)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[(R)-2-hydroxy-3-(4-methanesulfonylpiperazin-1-yl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(4-methanesulfonylmethanesulfonylpiperazin-1-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]-oct-3-yl}amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(4-acetylpiperazin-1-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-(1,1-dioxo-1λ6-thiomorpholin-4-yl)-2-methoxypropyl]-8-azabicyclo[3.2.1]oct-3-yl}amide;
methylcarbamic acid 2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}-1-(4-methanesulfonylpiperazin-1-yl-methyl)ethyl ester;
methylcarbamic acid 1-(4-dimethylcarbamoylpiperazin-1-ylmethyl)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-aza-bicyclo[3.2.1]oct-8-yl}ethyl ester;
methylcarbamic acid 1-[3-(acetylmethylamino)pyrrolidin-1-ylmethyl]-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-aza-bicyclo[3.2.1]oct-8-yl}ethyl ester;
methylcarbamic acid 1-(4-acetylpiperazin-1-ylmethyl)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}-ethyl ester;
methylcarbamic acid (R)-2-{(1S,3R,5R)-3-[(1-isopropyl-2-oxo-1,2-dihydro-quinoline-3-carbonyl)amino]-8-azabicyclo[3.2.1]oct-8-yl}-1-(4-methanesulfonyl-piperazin-1-ylmethyl)ethyl ester; and
1-isopropyl-2-oxo-1,2-dihydroquinoline-3-carboxylic acid {(1S,3R,5R)-8-[3-hydroxy-2-(4-methanesulfonylpiperazin-1-ylmethyl)propyl]-8-azabicyclo[3.2.1]oct-3-yl}-amide; and
pharmaceutically-acceptable salts thereof.