Pytorch build from source stuck on multiple MKL_THREADING = OMP and quit configure without the result

delphi: <p>OS: Ubuntu 20.04<br>
Cuda 10.2<br>
Tesla K10<br>
driver: nvidia 470.82.01<br>
GCC: 8<br>
Anaconda ver: 2021.11<br>
Cmake: 3.19.6</p>
<p>Before build were installed:<br>
conda install -c numba numba<br>
conda install astunparse numpy ninja pyyaml mkl mkl-include setuptools cmake cffi typing_extensions future six requests dataclasses</p>
<p>conda install -c pytorch magma-cuda102</p>
<p>The output of configure stage ends with stuck and quit with no result, no build</p>
<h2>
<a name="building-wheel-torch-1110a0git08d8f81-building-version-1110a0git08d8f81-cmake-gninja-dbuild_pythontrue-dbuild_testtrue-dcmake_build_typerelease-dcmake_install_prefixhomedigpytorchtorch-dcmake_prefix_pathhomediganaconda3libpython39site-packages-dnumpy_include_dirhomediganaconda3libpython39site-packagesnumpycoreinclude-dpython_executablehomediganaconda3binpython-dpython_include_dirhomediganaconda3includepython39-dpython_libraryhomediganaconda3liblibpython39a-dtorch_build_version1110a0git08d8f81-duse_cuda1-duse_cudnn1-duse_mkldnn1-duse_numpytrue-homedigpytorch-the-cxx-compiler-identification-is-clang-1000-the-c-compiler-identification-is-gnu-840-detecting-cxx-compiler-abi-info-detecting-cxx-compiler-abi-info-done-check-for-working-cxx-compiler-usrbinc-skipped-detecting-cxx-compile-features-detecting-cxx-compile-features-done-detecting-c-compiler-abi-info-detecting-c-compiler-abi-info-done-check-for-working-c-compiler-usrbincc-skipped-detecting-c-compile-features-detecting-c-compile-features-done-not-forcing-any-particular-blas-to-be-found-could-not-find-ccache-consider-installing-ccache-to-speed-up-compilation-performing-test-compiler_works-performing-test-compiler_works-success-performing-test-support_glibcxx_use_c99-performing-test-support_glibcxx_use_c99-success-performing-test-caffe2_exception_ptr_supported-performing-test-caffe2_exception_ptr_supported-success-stdexception_ptr-is-supported-performing-test-caffe2_need_to_turn_off_deprecation_warning-performing-test-caffe2_need_to_turn_off_deprecation_warning-failed-turning-off-deprecation-warning-due-to-glog-performing-test-c_has_avx_1-performing-test-c_has_avx_1-failed-performing-test-c_has_avx_2-performing-test-c_has_avx_2-success-performing-test-c_has_avx2_1-performing-test-c_has_avx2_1-failed-performing-test-c_has_avx2_2-performing-test-c_has_avx2_2-success-performing-test-c_has_avx512_1-performing-test-c_has_avx512_1-failed-performing-test-c_has_avx512_2-performing-test-c_has_avx512_2-failed-performing-test-c_has_avx512_3-performing-test-c_has_avx512_3-failed-performing-test-cxx_has_avx_1-performing-test-cxx_has_avx_1-failed-performing-test-cxx_has_avx_2-performing-test-cxx_has_avx_2-success-performing-test-cxx_has_avx2_1-performing-test-cxx_has_avx2_1-failed-performing-test-cxx_has_avx2_2-performing-test-cxx_has_avx2_2-success-performing-test-cxx_has_avx512_1-performing-test-cxx_has_avx512_1-failed-performing-test-cxx_has_avx512_2-performing-test-cxx_has_avx512_2-failed-performing-test-cxx_has_avx512_3-performing-test-cxx_has_avx512_3-failed-current-compiler-supports-avx2-extension-will-build-perfkernels-performing-test-caffe2_compiler_supports_avx512_extensions-performing-test-caffe2_compiler_supports_avx512_extensions-success-current-compiler-supports-avx512f-extension-will-build-fbgemm-performing-test-compiler_supports_hidden_visibility-performing-test-compiler_supports_hidden_visibility-success-performing-test-compiler_supports_hidden_inline_visibility-performing-test-compiler_supports_hidden_inline_visibility-success-performing-test-compiler_supports_rdynamic-performing-test-compiler_supports_rdynamic-success-found-cuda-usrlocalcuda-102-found-version-102-the-cuda-compiler-identification-is-nvidia-10289-detecting-cuda-compiler-abi-info-detecting-cuda-compiler-abi-info-done-check-for-working-cuda-compiler-usrlocalcuda-102binnvcc-skipped-detecting-cuda-compile-features-detecting-cuda-compile-features-done-caffe2-cuda-detected-102-caffe2-cuda-nvcc-is-usrlocalcuda-102binnvcc-caffe2-cuda-toolkit-directory-usrlocalcuda-102-caffe2-header-version-is-102-found-cudnn-usrlibcudalib64libcudnnso-found-cudnn-v830-include-usrlocalcuda-102include-library-usrlibcudalib64libcudnnso-usrlocalcuda-102lib64libnvrtcso-shorthash-is-08c4863f-autodetected-cuda-architectures-30-30-30-added-cuda-nvcc-flags-for-gencodearchcompute_30codesm_30-building-using-own-protobuf-under-third_party-per-request-use-custom-protobuf-build-1" class="anchor" href="#building-wheel-torch-1110a0git08d8f81-building-version-1110a0git08d8f81-cmake-gninja-dbuild_pythontrue-dbuild_testtrue-dcmake_build_typerelease-dcmake_install_prefixhomedigpytorchtorch-dcmake_prefix_pathhomediganaconda3libpython39site-packages-dnumpy_include_dirhomediganaconda3libpython39site-packagesnumpycoreinclude-dpython_executablehomediganaconda3binpython-dpython_include_dirhomediganaconda3includepython39-dpython_libraryhomediganaconda3liblibpython39a-dtorch_build_version1110a0git08d8f81-duse_cuda1-duse_cudnn1-duse_mkldnn1-duse_numpytrue-homedigpytorch-the-cxx-compiler-identification-is-clang-1000-the-c-compiler-identification-is-gnu-840-detecting-cxx-compiler-abi-info-detecting-cxx-compiler-abi-info-done-check-for-working-cxx-compiler-usrbinc-skipped-detecting-cxx-compile-features-detecting-cxx-compile-features-done-detecting-c-compiler-abi-info-detecting-c-compiler-abi-info-done-check-for-working-c-compiler-usrbincc-skipped-detecting-c-compile-features-detecting-c-compile-features-done-not-forcing-any-particular-blas-to-be-found-could-not-find-ccache-consider-installing-ccache-to-speed-up-compilation-performing-test-compiler_works-performing-test-compiler_works-success-performing-test-support_glibcxx_use_c99-performing-test-support_glibcxx_use_c99-success-performing-test-caffe2_exception_ptr_supported-performing-test-caffe2_exception_ptr_supported-success-stdexception_ptr-is-supported-performing-test-caffe2_need_to_turn_off_deprecation_warning-performing-test-caffe2_need_to_turn_off_deprecation_warning-failed-turning-off-deprecation-warning-due-to-glog-performing-test-c_has_avx_1-performing-test-c_has_avx_1-failed-performing-test-c_has_avx_2-performing-test-c_has_avx_2-success-performing-test-c_has_avx2_1-performing-test-c_has_avx2_1-failed-performing-test-c_has_avx2_2-performing-test-c_has_avx2_2-success-performing-test-c_has_avx512_1-performing-test-c_has_avx512_1-failed-performing-test-c_has_avx512_2-performing-test-c_has_avx512_2-failed-performing-test-c_has_avx512_3-performing-test-c_has_avx512_3-failed-performing-test-cxx_has_avx_1-performing-test-cxx_has_avx_1-failed-performing-test-cxx_has_avx_2-performing-test-cxx_has_avx_2-success-performing-test-cxx_has_avx2_1-performing-test-cxx_has_avx2_1-failed-performing-test-cxx_has_avx2_2-performing-test-cxx_has_avx2_2-success-performing-test-cxx_has_avx512_1-performing-test-cxx_has_avx512_1-failed-performing-test-cxx_has_avx512_2-performing-test-cxx_has_avx512_2-failed-performing-test-cxx_has_avx512_3-performing-test-cxx_has_avx512_3-failed-current-compiler-supports-avx2-extension-will-build-perfkernels-performing-test-caffe2_compiler_supports_avx512_extensions-performing-test-caffe2_compiler_supports_avx512_extensions-success-current-compiler-supports-avx512f-extension-will-build-fbgemm-performing-test-compiler_supports_hidden_visibility-performing-test-compiler_supports_hidden_visibility-success-performing-test-compiler_supports_hidden_inline_visibility-performing-test-compiler_supports_hidden_inline_visibility-success-performing-test-compiler_supports_rdynamic-performing-test-compiler_supports_rdynamic-success-found-cuda-usrlocalcuda-102-found-version-102-the-cuda-compiler-identification-is-nvidia-10289-detecting-cuda-compiler-abi-info-detecting-cuda-compiler-abi-info-done-check-for-working-cuda-compiler-usrlocalcuda-102binnvcc-skipped-detecting-cuda-compile-features-detecting-cuda-compile-features-done-caffe2-cuda-detected-102-caffe2-cuda-nvcc-is-usrlocalcuda-102binnvcc-caffe2-cuda-toolkit-directory-usrlocalcuda-102-caffe2-header-version-is-102-found-cudnn-usrlibcudalib64libcudnnso-found-cudnn-v830-include-usrlocalcuda-102include-library-usrlibcudalib64libcudnnso-usrlocalcuda-102lib64libnvrtcso-shorthash-is-08c4863f-autodetected-cuda-architectures-30-30-30-added-cuda-nvcc-flags-for-gencodearchcompute_30codesm_30-building-using-own-protobuf-under-third_party-per-request-use-custom-protobuf-build-1"></a>Building wheel torch-1.11.0a0+git08d8f81<br>
– Building version 1.11.0a0+git08d8f81<br>
cmake -GNinja -DBUILD_PYTHON=True -DBUILD_TEST=True -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/home/dig/pytorch/torch -DCMAKE_PREFIX_PATH=/home/dig/anaconda3/lib/python3.9/site-packages -DNUMPY_INCLUDE_DIR=/home/dig/anaconda3/lib/python3.9/site-packages/numpy/core/include -DPYTHON_EXECUTABLE=/home/dig/anaconda3/bin/python -DPYTHON_INCLUDE_DIR=/home/dig/anaconda3/include/python3.9 -DPYTHON_LIBRARY=/home/dig/anaconda3/lib/libpython3.9.a -DTORCH_BUILD_VERSION=1.11.0a0+git08d8f81 -DUSE_CUDA=1 -DUSE_CUDNN=1 -DUSE_MKLDNN=1 -DUSE_NUMPY=True /home/dig/pytorch<br>
– The CXX compiler identification is Clang 10.0.0<br>
– The C compiler identification is GNU 8.4.0<br>
– Detecting CXX compiler ABI info<br>
– Detecting CXX compiler ABI info - done<br>
– Check for working CXX compiler: /usr/bin/c++ - skipped<br>
– Detecting CXX compile features<br>
– Detecting CXX compile features - done<br>
– Detecting C compiler ABI info<br>
– Detecting C compiler ABI info - done<br>
– Check for working C compiler: /usr/bin/cc - skipped<br>
– Detecting C compile features<br>
– Detecting C compile features - done<br>
– Not forcing any particular BLAS to be found<br>
– Could not find ccache. Consider installing ccache to speed up compilation.<br>
– Performing Test COMPILER_WORKS<br>
– Performing Test COMPILER_WORKS - Success<br>
– Performing Test SUPPORT_GLIBCXX_USE_C99<br>
– Performing Test SUPPORT_GLIBCXX_USE_C99 - Success<br>
– Performing Test CAFFE2_EXCEPTION_PTR_SUPPORTED<br>
– Performing Test CAFFE2_EXCEPTION_PTR_SUPPORTED - Success<br>
– std::exception_ptr is supported.<br>
– Performing Test CAFFE2_NEED_TO_TURN_OFF_DEPRECATION_WARNING<br>
– Performing Test CAFFE2_NEED_TO_TURN_OFF_DEPRECATION_WARNING - Failed<br>
– Turning off deprecation warning due to glog.<br>
– Performing Test C_HAS_AVX_1<br>
– Performing Test C_HAS_AVX_1 - Failed<br>
– Performing Test C_HAS_AVX_2<br>
– Performing Test C_HAS_AVX_2 - Success<br>
– Performing Test C_HAS_AVX2_1<br>
– Performing Test C_HAS_AVX2_1 - Failed<br>
– Performing Test C_HAS_AVX2_2<br>
– Performing Test C_HAS_AVX2_2 - Success<br>
– Performing Test C_HAS_AVX512_1<br>
– Performing Test C_HAS_AVX512_1 - Failed<br>
– Performing Test C_HAS_AVX512_2<br>
– Performing Test C_HAS_AVX512_2 - Failed<br>
– Performing Test C_HAS_AVX512_3<br>
– Performing Test C_HAS_AVX512_3 - Failed<br>
– Performing Test CXX_HAS_AVX_1<br>
– Performing Test CXX_HAS_AVX_1 - Failed<br>
– Performing Test CXX_HAS_AVX_2<br>
– Performing Test CXX_HAS_AVX_2 - Success<br>
– Performing Test CXX_HAS_AVX2_1<br>
– Performing Test CXX_HAS_AVX2_1 - Failed<br>
– Performing Test CXX_HAS_AVX2_2<br>
– Performing Test CXX_HAS_AVX2_2 - Success<br>
– Performing Test CXX_HAS_AVX512_1<br>
– Performing Test CXX_HAS_AVX512_1 - Failed<br>
– Performing Test CXX_HAS_AVX512_2<br>
– Performing Test CXX_HAS_AVX512_2 - Failed<br>
– Performing Test CXX_HAS_AVX512_3<br>
– Performing Test CXX_HAS_AVX512_3 - Failed<br>
– Current compiler supports avx2 extension. Will build perfkernels.<br>
– Performing Test CAFFE2_COMPILER_SUPPORTS_AVX512_EXTENSIONS<br>
– Performing Test CAFFE2_COMPILER_SUPPORTS_AVX512_EXTENSIONS - Success<br>
– Current compiler supports avx512f extension. Will build fbgemm.<br>
– Performing Test COMPILER_SUPPORTS_HIDDEN_VISIBILITY<br>
– Performing Test COMPILER_SUPPORTS_HIDDEN_VISIBILITY - Success<br>
– Performing Test COMPILER_SUPPORTS_HIDDEN_INLINE_VISIBILITY<br>
– Performing Test COMPILER_SUPPORTS_HIDDEN_INLINE_VISIBILITY - Success<br>
– Performing Test COMPILER_SUPPORTS_RDYNAMIC<br>
– Performing Test COMPILER_SUPPORTS_RDYNAMIC - Success<br>
– Found CUDA: /usr/local/cuda-10.2 (found version “10.2”)<br>
– The CUDA compiler identification is NVIDIA 10.2.89<br>
– Detecting CUDA compiler ABI info<br>
– Detecting CUDA compiler ABI info - done<br>
– Check for working CUDA compiler: /usr/local/cuda-10.2/bin/nvcc - skipped<br>
– Detecting CUDA compile features<br>
– Detecting CUDA compile features - done<br>
– Caffe2: CUDA detected: 10.2<br>
– Caffe2: CUDA nvcc is: /usr/local/cuda-10.2/bin/nvcc<br>
– Caffe2: CUDA toolkit directory: /usr/local/cuda-10.2<br>
– Caffe2: Header version is: 10.2<br>
– Found CUDNN: /usr/lib/cuda/lib64/libcudnn.so<br>
– Found cuDNN: v8.3.0  (include: /usr/local/cuda-10.2/include, library: /usr/lib/cuda/lib64/libcudnn.so)<br>
– /usr/local/cuda-10.2/lib64/libnvrtc.so shorthash is 08c4863f<br>
– Autodetected CUDA architecture(s):  3.0 3.0 3.0<br>
– Added CUDA NVCC flags for: -gencode;arch=compute_30,code=sm_30<br>
– Building using own protobuf under third_party per request.<br>
– Use custom protobuf build.</h2>
<p>– 3.13.0.0<br>
– Looking for pthread.h<br>
– Looking for pthread.h - found<br>
– Performing Test CMAKE_HAVE_LIBC_PTHREAD<br>
– Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed<br>
– Check if compiler accepts -pthread<br>
– Check if compiler accepts -pthread - yes<br>
– Found Threads: TRUE<br>
– Performing Test protobuf_HAVE_BUILTIN_ATOMICS<br>
– Performing Test protobuf_HAVE_BUILTIN_ATOMICS - Success<br>
– Caffe2 protobuf include directory: $&lt;BUILD_INTERFACE:/home/dig/pytorch/third_party/protobuf/src&gt;$&lt;INSTALL_INTERFACE:include&gt;<br>
– Trying to find preferred BLAS backend of choice: MKL<br>
– MKL_THREADING = OMP<br>
– Looking for sys/types.h<br>
– Looking for sys/types.h - found<br>
– Looking for stdint.h<br>
– Looking for stdint.h - found<br>
– Looking for stddef.h<br>
– Looking for stddef.h - found<br>
– Check size of void*<br>
– Check size of void* - done<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
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– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP<br>
– MKL_THREADING = OMP</p>
<p>I try to change the Conda ver from 2021.4 up to 2021.11 - no result</p>

delphi: <p>I also try to build the pytorch 1.10 - also the same problem is</p>

myd: <p>Did you find a solution for this error?</p>