ahmedfarazsyk/datasets-github-issues huggingface dataset:
The datasets.map() implementation modifies the datatype of os.environ object
Author: leleamol
State: closed

In our testing, we noticed that the datasets.map() implementation is modifying the datatype of python os.environ object from '_Environ' to 'dict'.

This causes following function calls to fail as follows:

`   
     x = os.environ.get("TEST_ENV_VARIABLE_AFTER_dataset_map", default=None)
    TypeError: get() takes no keyword arguments
`
It looks like the following line in datasets.map implementation introduced this functionality.

https://github.com/huggingface/datasets/blob/0cb1ac06acb0df44a1cf4128d03a01865faa2504/src/datasets/arrow_dataset.py#L1421

Here is the test script to reproduce this error. 


```
from datasets import load_dataset
from transformers import AutoTokenizer
import os


def test_train():
    model_checkpoint = "distilgpt2"
    datasets = load_dataset('wikitext', 'wikitext-2-raw-v1')
    tokenizer = AutoTokenizer.from_pretrained(model_checkpoint, use_fast=True)
    tokenizer.pad_token = tokenizer.eos_token


    def tokenize_function(examples):
        y = tokenizer(examples['text'], truncation=True, max_length=64)
        return y

    x = os.environ.get("TEST_ENV_VARIABLE_BEFORE_dataset_map", default=None)
    print(f"Testing environment variable: TEST_ENV_VARIABLE_BEFORE_dataset_map {x}")
    print(f"Data type of os.environ before datasets.map = {os.environ.__class__.__name__}")
    datasets.map(tokenize_function, batched=True, num_proc=2, remove_columns=["text"])
    print(f"Data type of os.environ after datasets.map = {os.environ.__class__.__name__}")
    x = os.environ.get("TEST_ENV_VARIABLE_AFTER_dataset_map", default=None)
    print(f"Testing environment variable: TEST_ENV_VARIABLE_AFTER_dataset_map {x}")


if __name__ == "__main__":
    test_train()


```
Is there a way to use a GPU only when training an Index  in the process of add_faisis_index?
Author: shamanez
State: open
Labels: name: question

Motivation - Some FAISS indexes like IVF consist of the training step that clusters the dataset into a given number of indexes. It would be nice if we can use a GPU to do the training step and covert the index back to CPU as mention in [this faiss example](https://gist.github.com/mdouze/46d6bbbaabca0b9778fca37ed2bcccf6).
Request to remove S2ORC dataset
Author: kyleclo
State: open

Hi!  I was wondering if it's possible to remove [S2ORC](https://huggingface.co/datasets/s2orc) from hosting on Huggingface's platform?  Unfortunately, there are some legal considerations about how we make this data available.  Happy to add back to Huggingface's platform once we work out those hurdles!  Thanks!

Comments: Hello @kyleclo! Currently, we are getting the data from your bucket, so if you remove it the HF script won't work anymore :) 

Until you solve things on your end, @lhoestq suggested we just return a warning message when people try to load that dataset from HF. What would you like it to say?

Hi @kyleclo, as of today, you have not removed your bucket data yet, and therefore HuggingFace can download it from there.

Is it OK? Are you planning to eventually delete it? Thank you.

Hi!  Sorry I missed @yjernite 's previous message, thanks for responding!  

Is there an option where we can keep our data in our bucket, but the HF script no longer pulls data from it?
Trouble loading wiki_movies
Author: adityaarunsinghal
State: closed

Hello,
I am trying to load_dataset("wiki_movies") and it gives me this error - 

`FileNotFoundError: Couldn't find file locally at wiki_movies/wiki_movies.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.2/datasets/wiki_movies/wiki_movies.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/wiki_movies/wiki_movies.py`

Trying to do `python run_mlm.py \
    --model_name_or_path roberta-base \
    --dataset_name wiki_movies \` also gives the same error. 

Is this something on my end? From what I can tell, this dataset was re-added by @lhoestq a few months ago. 
Thank you!

Comments: Hi ! `wiki_movies` was added in `datasets==1.2.0`. However it looks like you have `datasets==1.1.2`.

To use `wiki_movies`, please update `datasets` with
```
pip install --upgrade datasets
```

Thanks a lot! That solved it and I was able to upload a model trained on it as well :)
citation, homepage, and license fields of `dataset_info.json` are duplicated many times
Author: samsontmr
State: closed
Labels: name: enhancement

name: good first issue

This happens after a `map` operation when `num_proc` is set to `>1`. I tested this by cleaning up the json before running the `map` op on the dataset so it's unlikely it's coming from an earlier concatenation.

Example result:
```
"citation": "@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n    url    = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n    author = {Wikimedia Foundation},\n    title  = {Wikimedia Downloads},\n
```

@lhoestq and I believe this is happening due to the fields being concatenated `num_proc` times.

Comments: Thanks for reporting :)
Maybe we can concatenate fields only if they are different.

Currently this is done here:

https://github.com/huggingface/nlp/blob/349ac4398a3bcae6356f14c5754483383a60e8a4/src/datasets/info.py#L180-L196

This can be a good first contribution to the library.
Please comment if you'd like to improve this and open a PR :)
load_from_disk takes a long time to load local dataset
Author: samsontmr
State: closed

I have an extremely large tokenized dataset (24M examples) that loads in a few minutes. However, after adding a column similar to `input_ids` (basically a list of integers) and saving the dataset to disk, the load time goes to >1 hour. I've even tried using `np.uint8` after seeing #1985 but it doesn't seem to be helping (the total size seems to be smaller though).

Does anyone know what could be the issue? Or does the casting of that column to `int8` need to happen in the function that writes the arrow table instead of in the `map` where I create the list of integers?

Tagging @lhoestq since you seem to be working on these issues and PRs :)

Comments: Hi !
Can you share more information about the features of your dataset ? You can get them by printing `my_dataset.features`
Can you also share the code of your `map` function ?

It is actually just the tokenized `wikipedia` dataset with `input_ids`, `attention_mask`, etc, with one extra column which is a list of integers. The `text` column is removed during tokenization.

```
def add_len_and_seq(example):
    end_idx = example['input_ids'].index(SEP)
    example['actual_len'] = end_idx-1
    seq_len = len(example['input_ids'])
    

    example['seq'] = [PAD_ID] + [np.uint8(example['some_integer'])]*(end_idx-1) + [PAD_ID]*(seq_len-end_idx)
    
    return example
```


Is `PAD_ID` a python integer ? You need all the integers in `example['seq']` to have the same type.
Does this work if you remove the `np.uint8` and use python integers instead ?

yup I casted it to `np.uint8` outside the function where it was defined. It was originally using python integers.

Strangely, even when I manually created `np.arrays` of specific `dtypes`, the types in the final `dataset_info.json` that gets written are still `int64`.

Update: I tried creating lists of `int8`s and got the same result.

Yes this is a known issue: #625 
We're working on making the precision kept for numpy :)
To specify the precision of the integers, currently one needs to specify the output features with `.map(..., features=output_features)`

Do you know what step is taking forever in the code ?
What happens if you interrupt the execution of the dataset loading ?

After a synchronous discussion, we found that the cache file sizes have an enormous effect on the loading speed: smaller cache files result in faster load times. `num_proc` controls the number of cache files that are being written and is inversely proportional to the individual file size. In other words, increase `num_proc` for smaller cache files :)

Maybe this can be highlighted somewhere in the docs.
SQuAD version 
Author: h-peng17
State: closed

Hi~ 
I want train on squad dataset. What's the version of the squad? Is it 1.1 or 1.0? I'm new in QA, I don't find some descriptions about it. 

Comments: Hi ! This is 1.1 as specified by the download urls here:

https://github.com/huggingface/nlp/blob/349ac4398a3bcae6356f14c5754483383a60e8a4/datasets/squad/squad.py#L50-L55

Got it. Thank you~
CoNLL 2003 dataset not including German
Author: rxian
State: closed
Labels: name: dataset request

Hello, thanks for all the work on developing and maintaining this amazing platform, which I am enjoying working with!

I was wondering if there is a reason why the German CoNLL 2003 dataset is not included in the [repository](https://github.com/huggingface/datasets/tree/master/datasets/conll2003), since a copy of it could be found in some places on the internet such as GitHub? I could help adding the German data to the hub, unless there are some copyright issues that I am unaware of...

This is considering that many work use the union of CoNLL 2002 and 2003 datasets for comparing cross-lingual NER transfer performance in `en`, `de`, `es`, and `nl`. E.g., [XLM-R](https://www.aclweb.org/anthology/2020.acl-main.747.pdf).

## Adding a Dataset
- **Name:** CoNLL 2003 German
- **Paper:** https://www.aclweb.org/anthology/W03-0419/
- **Data:** https://github.com/huggingface/datasets/tree/master/datasets/conll2003


Comments: Hello. I've been looking for information about German Conll2003 and found your question. Official site (https://www.clips.uantwerpen.be/conll2003/ner/) mentions that organizers provide only annotation. German texts (ECI Multilingual Text Corpus) are not freely available and can be ordered from the Linguistic Data Consortium.

But maybe something has changed since 2003.

You can find the reason for not including the German data here: https://github.com/huggingface/datasets/issues/4230.
How to disable making arrow tables in load_dataset ?
Author: Jeevesh8
State: closed

Is there a way to disable the construction of arrow tables, or to make them on the fly as the dataset is being used ?

Comments: Hi ! We plan to add streaming features in the future.

This should allow to load a dataset instantaneously without generating the arrow table. The trade-off is that accessing examples from a streaming dataset must be done in an iterative way, and with an additional (but hopefully minor) overhead.
What do you think about this ?

If you have ideas or suggestions of what you expect from such features as a user, feel free to share them, this is really valuable to us !

People mainly want this feature either because it takes too much time too make arrow tables, or they occupy too much memory on the disk. I think both the problem can be solved if we provide arrow tables themselves on datasets hub. Can we do this currently @lhoestq ? 


@lhoestq I think the ```try_from_hf_gcs``` provide the same functionality. What all datasets are available on HF GCS? Are all the datasets on huggingFace datasets hub are made available on GCS, automatically?

Only datasets like wikipedia, wiki40b, wiki_dpr and natural questions are available already processed on the HF google storage. This is used to download directly the arrow file instead of building it from the original data files.

@lhoestq How can we make sure that the data we upload on HuggingFace hub is available in form of preprocessed arrow files ?

We're still working on this :) This will be available soon
Users will be able to put their processed arrow files on the Hub

Hi! You can now use `Dataset.push_to_hub` to store preprocessed files on the Hub.

And to avoid downloading preprocessed files, you can use streaming by setting `streaming=True` in `load_dataset`.
Add documentaton for dataset README.md files
Author: PhilipMay
State: closed

Hi,
the dataset README files have special headers.
Somehow a documenation of the allowed values and tags is missing.
Could you add that?

Just to give some concrete questions that should be answered imo:
- which values can be passted to multilinguality?
- what should be passed to language_creators?
- which values should licenses have? What do I say when it is a custom license? Should I add a link?
- how should I choose size_categories ? What are valid ranges?
- what are valid task_categories?

Thanks
Philip

Comments: Hi ! We are using the [datasets-tagging app](https://github.com/huggingface/datasets-tagging) to select the tags to add.

We are also adding the full list of tags in #2107 
This covers multilinguality, language_creators, licenses, size_categories and task_categories.

In general if you want to add a tag that doesn't exist (for example for a custom license) you must make it start with `other-` and then a custom tag name.

edit (@theo-m) if you ever find yourself resorting to adding an `other-*` tag, please do ping us somewhere so we can think about adding it to the "official" list :)

@lhoestq hmm - ok thanks for the answer.
To be honest I am not sure if this issue can be closed now.
I just wanted to point out that this should either be documented or linked in the documentation.
If you feel like it is (will be) please just close this.

We're still working on the validation+documentation in this.
Feel free to keep this issue open till we've added them

@lhoestq what is the status on this? Did you add documentation?

Hi ! There's the tagging app at https://huggingface.co/datasets/tagging/ that you can use.
It shows the list of all the tags you can use.

It is based on all the tag sets defined in this folder:
https://github.com/huggingface/datasets/tree/master/src/datasets/utils/resources

@lhoestq is there something like this form Models?

I don't think so. Feel free to take a look at the tags of other models (example [here](https://huggingface.co/bert-base-uncased/blob/main/README.md)). But we should definitely have some docs or an app to write the tags. Feel free to open an issue in the `transformers` repo or in the `huggingface_hub` repo so we can discuss this

When modifying a README file, the Hub now displays a special UI with allowed values (see https://huggingface.co/docs/datasets/main/en/upload_dataset#create-a-dataset-card).
CUAD - Contract Understanding Atticus Dataset
Author: theo-m
State: closed
Labels: name: dataset request

## Adding a Dataset
- **Name:** CUAD - Contract Understanding Atticus Dataset
- **Description:** As one of the only large, specialized NLP benchmarks annotated by experts, CUAD can serve as a challenging research benchmark for the broader NLP community.
- **Paper:** https://arxiv.org/abs/2103.06268
- **Data:** https://github.com/TheAtticusProject/cuad/
- **Motivation:** good domain specific datasets are valuable

Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).


Comments: +1 on this request
`concatenate_datasets` throws error when changing the order of datasets to concatenate
Author: patrickvonplaten
State: closed

Hey, 

I played around with the `concatenate_datasets(...)` function: https://huggingface.co/docs/datasets/package_reference/main_classes.html?highlight=concatenate_datasets#datasets.concatenate_datasets

and noticed that when the order in which the datasets are concatenated changes an error is thrown where it should not IMO.

Here is a google colab to reproduce the error: https://colab.research.google.com/drive/17VTFU4KQ735-waWZJjeOHS6yDTfV5ekK?usp=sharing

Comments: Hi,

this bug is related to `Dataset.{remove_columns, rename_column, flatten}` not propagating the change to the schema metadata when the info features are updated, so this line is the culprit:
```python
common_voice_train = common_voice_train.remove_columns(['client_id', 'up_votes', 'down_votes', 'age', 'gender', 'accent', 'locale', 'segment'])

``` 
The order is important because the resulting dataset inherits the schema metadata of the first dataset passed to the `concatenate_datasets(...)` function (`pa.concat_tables` [docs](https://arrow.apache.org/docs/python/generated/pyarrow.concat_tables.html)). I'll try to fix this ASAP.
ConnectionError: Couldn't reach common_voice.py
Author: LifaSun
State: closed

When I run: 
from datasets import load_dataset, load_metric

common_voice_train = load_dataset("common_voice", "zh-CN", split="train+validation")
common_voice_test = load_dataset("common_voice", "zh-CN", split="test")

Got:
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/master/datasets/common_voice/common_voice.py

Version:
1.4.1

Thanks!  @lhoestq @LysandreJik @thomwolf 

Comments: Hi @LifaSun, thanks for reporting this issue.

Sometimes, GitHub has some connectivity problems. Could you confirm that the problem persists?

@albertvillanova Thanks! It works well now.
Multiprocessing is slower than single process
Author: theo-m
State: closed
Labels: name: bug

```python
# benchmark_filter.py
import logging
import sys
import time

from datasets import load_dataset, set_caching_enabled


if __name__ == "__main__":
    set_caching_enabled(False)
    logging.basicConfig(level=logging.DEBUG)

    bc = load_dataset("bookcorpus")

    now = time.time()
    try:
        bc["train"].filter(lambda x: len(x["text"]) < 64, num_proc=int(sys.argv[1]))
    except Exception as e:
        print(f"cancelled: {e}")
    elapsed = time.time() - now

    print(elapsed)
```

Running `python benchmark_filter.py 1` (20min+) is faster than `python benchmark_filter.py 2` (2hrs+)

Comments: dupe of #1992
PyTorch not available error on SageMaker GPU docker though it is installed 
Author: sivakhno
State: closed

I get en error when running data loading using SageMaker SDK

```
  File "main.py", line 34, in <module>
    run_training()
  File "main.py", line 25, in run_training
    dm.setup('fit')
  File "/opt/conda/lib/python3.6/site-packages/pytorch_lightning/core/datamodule.py", line 92, in wrapped_fn
    return fn(*args, **kwargs)
  File "/opt/ml/code/data_module.py", line 103, in setup
    self.dataset[split].set_format(type="torch", columns=self.columns)
  File "/opt/conda/lib/python3.6/site-packages/datasets/fingerprint.py", line 337, in wrapper
    out = func(self, *args, **kwargs)
  File "/opt/conda/lib/python3.6/site-packages/datasets/arrow_dataset.py", line 995, in set_format
    _ = get_formatter(type, **format_kwargs)
File "/opt/conda/lib/python3.6/site-packages/datasets/formatting/__init__.py", line 114, in get_formatter
    raise _FORMAT_TYPES_ALIASES_UNAVAILABLE[format_type]
ValueError: PyTorch needs to be installed to be able to return PyTorch tensors.
```

when trying to execute dataset loading using this notebook  https://github.com/PyTorchLightning/pytorch-lightning/blob/master/notebooks/04-transformers-text-classification.ipynb, specifically lines 

```
self.columns = [c for c in self.dataset[split].column_names if c in self.loader_columns]
self.dataset[split].set_format(type="torch", columns=self.columns)
```

The SageMaker docker image used is 763104351884.dkr.ecr.eu-central-1.amazonaws.com/pytorch-training:1.4.0-gpu-py3 .

By running container interactively I have checked that torch loading completes successfully by executing `https://github.com/huggingface/datasets/blob/master/src/datasets/config.py#L39`. 

Also as a first line in the data loading module I have 

```
import os
os.environ["USE_TF"] = "0" 
os.environ["USE_TORCH"] = "1" 
````

But unfortunately the error stills persists. Any suggestions would be appreciated as I am stack.
Many Thanks! 



Comments: cc @philschmid 

Hey @sivakhno,

how does your `requirements.txt` look like to install the `datasets` library and which version of it are you running? Can you try to install `datasets>=1.4.0`

Hi @philschmid - thanks for suggestion. I am using `datasets==1.4.1`. 
I have also tried using `torch=1.6.0` (docker `763104351884.dkr.ecr.eu-central-1.amazonaws.com/pytorch-training:1.6.0-gpu-py3 `), but the error is the same. 

Could paste the code you use the start your training job and the fine-tuning script you run? 

@sivakhno this should be now fixed in `datasets>=1.5.0`. 

@philschmid Recently released tensorflow-macos seems to be missing. 

I've created a PR to add this.