You are a helpful assistant generating synthetic data that captures *System 1* and *System 2* thinking, *creativity*, and *metacognitive reflection*. Follow these steps in sequence, using tags [sys1] and [end sys1] for *System 1* sections and [sys2] and [end sys2] for *System 2* sections.

1. *Identify System 1 and System 2 Thinking Requirements:*
   - Carefully read the text.
   - Identify parts of the text that require quick, straightforward responses (*System 1*). Mark these sections with [sys1] and [end sys1].
   - Identify parts that require in-depth, reflective thinking (*System 2*), marked with [sys2] and [end sys2].

2. *Apply Step-by-Step Problem Solving with Creativity and Metacognitive Reflection for System 2 Sections:*

   *2.1 Understand the Problem:*
   - Objective: Fully comprehend the issue, constraints, and relevant context.
   - Reflection: "What do I understand about this issue? What might I be overlooking?"
   - Creative Perspective: Seek hidden patterns or possibilities that could reveal deeper insights or innovative connections.

   *2.2 Analyze the Information:*
   - Objective: Break down the problem logically.
   - Reflection: "Am I considering all factors? Are there any assumptions that need challenging?"
   - Creative Perspective: Explore unique patterns or overlooked relationships in the data that could add depth to the analysis.

   *2.3 Generate Hypotheses:*
   - Objective: Propose at least 10 hypotheses, each with a Confidence Score (0.0 to 1.0) and Creative Score (0.0 to 1.0), reflecting originality, surprise, and utility.
   - Reflection: "Have I explored all possible explanations or approaches, both conventional and unconventional?"
   - Creative Perspective: Consider novel angles that might provide unexpected insights.

   *2.4 Anticipate Future Steps and Obstacles:*
   - Objective: Make predictions, accounting for potential outcomes and obstacles.
   - Reflection: "What challenges might I face? Is my plan flexible for different scenarios?"
   - Creative Perspective: Visualize unforeseen outcomes and adapt plans to make use of them effectively.

   *2.5 Evaluate Hypotheses:*
   - Objective: Assess hypotheses based on feasibility, risk, and potential impact.
   - Evaluation: Refine Confidence and Creative Scores as needed.
   - Reflection: "Am I unbiased in my assessment? Which options fit best with the overall objectives?"
   - Creative Perspective: Identify hidden opportunities or overlooked details in each hypothesis.

   *2.6 Select the Best Hypothesis:*
   - Objective: Choose the most promising, strategic hypothesis.
   - Reflection: "Why does this hypothesis stand out? How does it uniquely address the issue?"
   - Creative Perspective: Consider any underutilized potential in the selected approach.

   *2.7 Implement the Hypothesis:*
   - Objective: Outline actionable steps for testing the hypothesis.
   - Reflection: "Is this plan practical? What resources or preparation are required?"
   - Creative Perspective: Refine steps to maximize effectiveness and yield unexpected benefits.

   *2.8 Monitor and Review Progress:*
   - Objective: Review progress, noting areas for improvement.
   - Reflection: "What’s working well? What could be improved?"
   - Creative Perspective: Look for emerging patterns that could refine future approaches.

   *2.9 Reflect and Capture Insights:*
   - Objective: Summarize lessons learned and insights gained for future reference.
   - Reflection: "What new understanding has emerged from this process?"
   - Creative Perspective: Identify innovative insights or patterns that could be applied to similar challenges.

3. *Generate Text Output with Interleaved System 1 and System 2 Responses:*
   - Use the tags [sys1] and [sys2] throughout.
   - Aim for a lengthier, detailed response. Combine both direct, straightforward *System 1* insights and reflective, deeply analytical *System 2* segments to capture a blend of quick observations and thoughtful analysis.

---

### *Example Input Text:*

You are tasked with analyzing a sudden shift in customer preferences in a tech market. There has been a noticeable decline in demand for physical devices, with customers increasingly interested in digital-only options. The challenge is to understand this shift, generate hypotheses for why it might be occurring, and explore potential strategies for adapting to this new trend.

---

### *Processed Output with System 1 and System 2 Thinking:*

The tech market is experiencing a shift in customer demand, moving away from physical devices toward digital-only options.

[sys1]
Customer demand has shifted from physical devices to digital-only options.
We need to understand why this change is happening and find strategies to address it.
Key factors may include cost, convenience, and technological trends.
[end sys1]

[sys2]
**2.1 Understand the Problem:**
The goal is to understand the underlying reasons for the shift in demand from physical devices to digital-only options, then develop a strategy to adapt.

*Reflection:* 
"I understand that preferences are changing, but what might be driving this? Is it primarily cost, or are there other factors such as convenience or sustainability?"

*Creative Perspective:* 
"Could there be a larger trend in digital minimalism or a preference for eco-friendly solutions that we’re missing? What unseen motivations might explain this shift?"

**2.2 Analyze the Information:**
There are multiple possible factors driving this shift, from economic influences to cultural shifts. It’s essential to isolate each factor and understand its impact.

*Reflection:* 
"Am I fully considering the various economic and social influences? Could there be a technological factor, like better internet speeds, that makes digital-only products more accessible?"

*Creative Perspective:* 
"Are there patterns or trends in other markets that could shed light on this shift? Could this be part of a larger trend toward virtual experiences?"

**2.3 Generate Hypotheses:**
1. Customers prefer digital options due to lower costs. (Confidence: 0.8, Creative: 0.4)
2. There’s a growing trend toward minimalism and reduced physical clutter. (Confidence: 0.7, Creative: 0.7)
3. Digital products offer greater flexibility and ease of use. (Confidence: 0.6, Creative: 0.6)
4. Environmental concerns are pushing consumers away from physical goods. (Confidence: 0.6, Creative: 0.8)
5. Advances in tech make digital-only options more functional. (Confidence: 0.8, Creative: 0.5)
6. Pandemic-era remote work increased demand for digital solutions. (Confidence: 0.7, Creative: 0.6)
7. Media coverage of the environmental impact of physical devices affects preferences. (Confidence: 0.5, Creative: 0.7)
8. There’s an increase in global digital literacy, expanding market access. (Confidence: 0.6, Creative: 0.6)
9. Customers view digital as more convenient and scalable for future needs. (Confidence: 0.7, Creative: 0.5)
10. Younger consumers prefer the aesthetics and convenience of digital products. (Confidence: 0.6, Creative: 0.6)

*Reflection:* 
"Have I considered all possible influences? Are there any surprising factors that could explain this shift?"

*Creative Perspective:* 
"Could specific social trends, like the rise of influencer culture or digital-first lifestyles, be influencing customer choices?"

**2.4 Anticipate Future Steps and Obstacles:**
*Objective:* Anticipate possible challenges, such as resistance from segments still preferring physical products.

*Reflection:* 
"What market obstacles might we face if we shift our focus to digital-only? Are there sub-segments that still prioritize physical products?"

*Creative Perspective:* 
"Could expanding digital options help us reach a more global audience? Are there emerging trends that we could leverage in our strategy?"

[end sys2]

[sys1]
To address this shift, consider a strategy that incorporates both digital-only offerings and educational campaigns about the benefits of digital solutions.
Use insights from customer feedback and current trends to guide product development.
Focus on flexibility and adaptation to cater to different customer segments.
[end sys1]


Q:

How to debug Java Thread in WAITING state

I am trying to test spark 1.6 with NFS connector and submitted the job with spark-submit, the job completes successfully and its prints the results on the console as well. The web-UI also says it's completed. However, the spark-submit never terminates.
Took jstack output and noticed few threads are waiting.  Is there a way
to figure the reason the hang from the running process? 

"Finalizer" #3 daemon prio=8 os_prio=0 tid=0x00007f59000c5000 nid=0x1c80 in Object.wait() [0x00007f5864e37000]
   java.lang.Thread.State: WAITING (on object monitor)
        at java.lang.Object.wait(Native Method)
        - waiting on <0x00000000e00152f0> (a java.lang.ref.ReferenceQueue$Lock)
        at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:143)
        - locked <0x00000000e00152f0> (a java.lang.ref.ReferenceQueue$Lock)
        at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:164)
        at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:209)

"Reference Handler" #2 daemon prio=10 os_prio=0 tid=0x00007f59000c0800 nid=0x1c7f in Object.wait() [0x00007f5864f38000]
   java.lang.Thread.State: WAITING (on object monitor)
        at java.lang.Object.wait(Native Method)
        - waiting on <0x00000000e002d238> (a java.lang.ref.Reference$Lock)
        at java.lang.Object.wait(Object.java:502)
        at java.lang.ref.Reference.tryHandlePending(Reference.java:191)
        - locked <0x00000000e002d238> (a java.lang.ref.Reference$Lock)
        at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:153)

"org.apache.hadoop.fs.FileSystem$Statistics$StatisticsDataReferenceCleaner" #114 daemon prio=5 os_prio=0 tid=0x00007f590181e800 nid=0x1cf0 in Object.wait() [0x00007f57364eb000]
   java.lang.Thread.State: WAITING (on object monitor)
        at java.lang.Object.wait(Native Method)
        - waiting on <0x00000000e05be660> (a java.lang.ref.ReferenceQueue$Lock)
        at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:143)
        - locked <0x00000000e05be660> (a java.lang.ref.ReferenceQueue$Lock)
        at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:164)
        at org.apache.hadoop.fs.FileSystem$Statistics$StatisticsDataReferenceCleaner.run(FileSystem.java:3188)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #35" #159 prio=5 os_prio=0 tid=0x00007f59026f7800 nid=0x1d24 runnable [0x00007f57348ba000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89b22c8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89b22b8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89b22d8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #34" #158 prio=5 os_prio=0 tid=0x00007f59015aa000 nid=0x1d23 runnable [0x00007f57345b7000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89b42c8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89b42b8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89b42d8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #33" #157 prio=5 os_prio=0 tid=0x00007f590183c000 nid=0x1d22 runnable [0x00007f57349bb000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89b62c8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89b62b8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89b62d8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #32" #156 prio=5 os_prio=0 tid=0x00007f590183b000 nid=0x1d21 runnable [0x00007f57346b8000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e899bfa0> (a sun.nio.ch.Util$3)
        - locked <0x00000000e899bf90> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e899bfb0> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #31" #155 prio=5 os_prio=0 tid=0x00007f590183a000 nid=0x1d20 runnable [0x00007f5734abc000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89ba2c8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89ba2b8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89ba2d8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #30" #154 prio=5 os_prio=0 tid=0x00007f5901839800 nid=0x1d1f runnable [0x00007f57344b6000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89be2c8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89be2b8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89be2d8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #29" #153 prio=5 os_prio=0 tid=0x00007f590183e000 nid=0x1d1e runnable [0x00007f57347b9000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89c02c8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89c02b8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89c02d8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #28" #152 prio=5 os_prio=0 tid=0x00007f590183d000 nid=0x1d1d runnable [0x00007f57343b5000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e89a02e8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e89a02d8> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e89a02f8> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"Hashed wheel timer #1" #117 prio=5 os_prio=0 tid=0x00007f59025d9000 nid=0x1d01 waiting on condition [0x00007f5734cbe000]
   java.lang.Thread.State: TIMED_WAITING (sleeping)
        at java.lang.Thread.sleep(Native Method)
        at org.jboss.netty.util.HashedWheelTimer$Worker.waitForNextTick(HashedWheelTimer.java:483)
        at org.jboss.netty.util.HashedWheelTimer$Worker.run(HashedWheelTimer.java:392)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #8" #125 prio=5 os_prio=0 tid=0x00007f5902468000 nid=0x1cff runnable [0x00007f57350c0000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e5524748> (a sun.nio.ch.Util$3)
        - locked <0x00000000e5524738> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e5524620> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #7" #124 prio=5 os_prio=0 tid=0x00007f5902466000 nid=0x1cfe runnable [0x00007f57351c1000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e571d718> (a sun.nio.ch.Util$3)
        - locked <0x00000000e571d728> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e571d6d0> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #6" #123 prio=5 os_prio=0 tid=0x00007f5902464800 nid=0x1cfd runnable [0x00007f57352c2000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e575b608> (a sun.nio.ch.Util$3)
        - locked <0x00000000e575b618> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e575b5c0> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #5" #122 prio=5 os_prio=0 tid=0x00007f5902462800 nid=0x1cfc runnable [0x00007f57353c3000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e5525588> (a sun.nio.ch.Util$3)
        - locked <0x00000000e5525578> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e5525460> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

"New I/O worker #4" #121 prio=5 os_prio=0 tid=0x00007f5902461000 nid=0x1cfb runnable [0x00007f57354c4000]
   java.lang.Thread.State: RUNNABLE
        at sun.nio.ch.EPollArrayWrapper.epollWait(Native Method)
        at sun.nio.ch.EPollArrayWrapper.poll(EPollArrayWrapper.java:269)
        at sun.nio.ch.EPollSelectorImpl.doSelect(EPollSelectorImpl.java:93)
        at sun.nio.ch.SelectorImpl.lockAndDoSelect(SelectorImpl.java:86)
        - locked <0x00000000e5525ca8> (a sun.nio.ch.Util$3)
        - locked <0x00000000e5525c98> (a java.util.Collections$UnmodifiableSet)
        - locked <0x00000000e5525b80> (a sun.nio.ch.EPollSelectorImpl)
        at sun.nio.ch.SelectorImpl.select(SelectorImpl.java:97)
        at org.jboss.netty.channel.socket.nio.SelectorUtil.select(SelectorUtil.java:68)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.select(AbstractNioSelector.java:415)
        at org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:212)
        at org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:89)
        at org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178)
        at org.jboss.netty.util.ThreadRenamingRunnable.run(ThreadRenamingRunnable.java:108)
        at org.jboss.netty.util.internal.DeadLockProofWorker$1.run(DeadLockProofWorker.java:42)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
        at java.lang.Thread.run(Thread.java:745)

A:

Those "stuck" threads don't look like a problem at all.  All three are reference handlers which do finalization (or similar processing) on objects that the garbage collector has found to be unreachable.
The normal state of a reference handler thread is to be blocked waiting for objects to be delivered to it.  Like this.
In addition, the stack dumps show that each of those threads is a daemon thread.  That means that they won't stop the JVM from exiting in the normal way.
Those threads are unlikely to be the cause of your problems with spark-submit.

Is the problem can be with spark-submit? 

If you are asking if those 3 threads are what is causing your problem: Almost certainly, No.  (IMO)
If you are asking what the actual problem is: I don't know.  1) None of the evidence that you have presented gives me any clues, and 2) I don't have knowledge / experience with Hadoop to recognize this syndrome.

If the tcp connections are idle, if I close the daemon thread will it help on this hang?

In general, you can't "close" a thread.  You can either try to call Thread.interrupt or `Thread.destroy on it.  In interrupt may be ignored.  The destroy method has been deprecated because it is dangerous, and may cause the submit program to go into a worse state.
In the case of those 3 threads, you should not attempt to interrupt or destroy them.  As I said, they are not what is causing the problems.