Sharashenidze retained his post of the country's military commissar after Georgia declared independence from the Soviet Union in April 1991. He was involved in a military coup against Georgia's first elected president Zviad Gamsakhurdia (December 1991–January 1992). In the course of the coup, the rebel Military Council appointed Sharashenidze Georgia's defense minister on January 3, 1992. On May 8, 1992, Eduard Shevardnadze, Georgia's new head of state, dismissed Sharashenidze as the minister, replacing him with Georgia National Guard chief Tengiz Kitovani. Sharashenidze was, instead, made a chief adviser to the Ministry of Defense of Georgia. In his capacity, he was present at the Georgian headquarters and was involved in the diplomatic efforts with Russia during the war with separatists in Abkhazia (1992–1993). He has described himself as being of a "pro-Russian" orientation. After 1995, Sharashenidze has had no noticeable political and military role in Georgia.