At the 1999 UNCAF Nations Cup, hosted in Costa Rica, El Salvador drew 1–1 with Guatemala and defeated Nicaragua 1–0 in the first round, with Magdonio Corrales scoring in both games. In the second group stage, they lost 3–1 to Honduras, 1–0 Guatemala and 4–0 to Costa Rica to finish bottom of the group, and failed to advance to the 2000 CONCACAF Gold Cup. They were coached by Mario Peres Ulibarri.