From January 2016, Filatov is the senior coach of the Russian men's national chess team. The team won a bronze medal at the 42nd Chess Olympiad in Baku in September 2016,a silver medal in the team championship in Khanty-Mansiysk in June 2017, a bronze medal at the 43rd Chess Olympiad in Batumi in October 2018 and a gold medal at the World Team Championship in Astana in March 2019.