Task: Class Definition Understanding (ontology: Sciences/Computer_Science)

Which of the following definitions best describes ''ChemmineR''?

A. This package can be used to handle MAGEML documents in Bioconductor
B. This package contains a systems biology markup language (SBML) interface and biochemical system analysis tools with illustrative examples.
C. A Graphical User Interface for the limma Microarray package
D. ChemMineR is an open source compound mining framework. It contains functions for atom descriptor calculation, structure similarity searching, clustering of compound libraries and various utilities for managing complex compound data. It also offers a wide range of visualization functions for compound clusters and chemical structures. The package is integrated with the online ChemMine environment and allows bidirectional communications between the two services.

Answer: ChemMineR is an open source compound mining framework. It contains functions for atom descriptor calculation, structure similarity searching, clustering of compound libraries and various utilities for managing complex compound data. It also offers a wide range of visualization functions for compound clusters and chemical structures. The package is integrated with the online ChemMine environment and allows bidirectional communications between the two services.