Repository: Sage-Bionetworks/schematic (language: python)

Issue:
Update schematic dependencies FDS-1312
Update schematic dependencies `synapseclient` and `schematic_db`.
`schematic_db` version is locked and will need to be unpegged once we update schematic to handle to `pandas 2.x.x`


Discussion / hints:

Fix patch:
diff --git a/.github/workflows/pdoc.yml b/.github/workflows/pdoc.yml
index 8823d0c02..1a1627c99 100644
--- a/.github/workflows/pdoc.yml
+++ b/.github/workflows/pdoc.yml
@@ -27,7 +27,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     env:
-      POETRY_VERSION:  1.2.0
+      POETRY_VERSION:  1.3.0
     strategy:
       matrix:
         python-version: ["3.9", "3.10"]
@@ -93,4 +93,4 @@ jobs:
       url: ${{ steps.deployment.outputs.page_url }}
     steps:
       - id: deployment
-        uses: actions/deploy-pages@v1
\ No newline at end of file
+        uses: actions/deploy-pages@v1
diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index 2255a52e2..804ef19e2 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -9,7 +9,7 @@ jobs:
   pypi_release:
     runs-on: ubuntu-latest
     env:
-      POETRY_VERSION:  1.2.0
+      POETRY_VERSION:  1.3.0
     if: github.event_name == 'push' && contains(github.ref, 'refs/tags')
     steps:
       #----------------------------------------------
diff --git a/README.md b/README.md
index 051e0c6e1..7d3890de8 100644
--- a/README.md
+++ b/README.md
@@ -59,7 +59,7 @@ Please note we have a [code of conduct](CODE_OF_CONDUCT.md), please follow it in
 ```
 git clone https://github.com/Sage-Bionetworks/schematic.git
 ```
-2. Install `poetry` (version 1.2 or later) using either the [official installer](https://python-poetry.org/docs/#installing-with-the-official-installer) or [pipx](https://python-poetry.org/docs/#installing-with-pipx). If you have an older installation of Poetry, we recommend uninstalling it first. 
+2. Install `poetry` (version 1.3.0 or later) using either the [official installer](https://python-poetry.org/docs/#installing-with-the-official-installer) or [pipx](https://python-poetry.org/docs/#installing-with-pipx). If you have an older installation of Poetry, we recommend uninstalling it first. 
 
 3. Start the virtual environment by doing: 
 ```
diff --git a/poetry.lock b/poetry.lock
index d1f5b59a4..e5a9d8c6e 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,18 +1,26 @@
+# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
+
 [[package]]
 name = "alabaster"
 version = "0.7.13"
 description = "A configurable sidebar-enabled Sphinx theme"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "alabaster-0.7.13-py3-none-any.whl", hash = "sha256:1ee19aca801bbabb5ba3f5f258e4422dfa86f82f3e9cefb0859b283cdd7f62a3"},
+    {file = "alabaster-0.7.13.tar.gz", hash = "sha256:a27a4a084d5e690e16e01e03ad2b2e552c61a65469419b907243193de1a84ae2"},
+]
 
 [[package]]
 name = "altair"
 version = "4.2.0"
 description = "Altair: A declarative statistical visualization library for Python."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "altair-4.2.0-py3-none-any.whl", hash = "sha256:0c724848ae53410c13fa28be2b3b9a9dcb7b5caa1a70f7f217bd663bb419935a"},
+    {file = "altair-4.2.0.tar.gz", hash = "sha256:d87d9372e63b48cd96b2a6415f0cf9457f50162ab79dc7a31cd7e024dd840026"},
+]
 
 [package.dependencies]
 entrypoints = "*"
@@ -27,53 +35,85 @@ dev = ["black", "docutils", "flake8", "ipython", "m2r", "mistune (<2.0.0)", "pyt
 
 [[package]]
 name = "anyio"
-version = "3.7.1"
+version = "4.0.0"
 description = "High level compatibility layer for multiple asynchronous event loop implementations"
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "anyio-4.0.0-py3-none-any.whl", hash = "sha256:cfdb2b588b9fc25ede96d8db56ed50848b0b649dca3dd1df0b11f683bb9e0b5f"},
+    {file = "anyio-4.0.0.tar.gz", hash = "sha256:f7ed51751b2c2add651e5747c891b47e26d2a21be5d32d9311dfe9692f3e5d7a"},
+]
 
 [package.dependencies]
-exceptiongroup = {version = "*", markers = "python_version < \"3.11\""}
+exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""}
 idna = ">=2.8"
 sniffio = ">=1.1"
 
 [package.extras]
-doc = ["Sphinx", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme (>=1.2.2)", "sphinxcontrib-jquery"]
-test = ["anyio[trio]", "coverage[toml] (>=4.5)", "hypothesis (>=4.0)", "mock (>=4)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"]
-trio = ["trio (<0.22)"]
+doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)"]
+test = ["anyio[trio]", "coverage[toml] (>=7)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"]
+trio = ["trio (>=0.22)"]
 
 [[package]]
 name = "appnope"
 version = "0.1.3"
 description = "Disable App Nap on macOS >= 10.9"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "appnope-0.1.3-py2.py3-none-any.whl", hash = "sha256:265a455292d0bd8a72453494fa24df5a11eb18373a60c7c0430889f22548605e"},
+    {file = "appnope-0.1.3.tar.gz", hash = "sha256:02bd91c4de869fbb1e1c50aafc4098827a7a54ab2f39d9dcba6c9547ed920e24"},
+]
 
 [[package]]
 name = "argon2-cffi"
-version = "21.3.0"
-description = "The secure Argon2 password hashing algorithm."
-category = "main"
+version = "23.1.0"
+description = "Argon2 for Python"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
+files = [
+    {file = "argon2_cffi-23.1.0-py3-none-any.whl", hash = "sha256:c670642b78ba29641818ab2e68bd4e6a78ba53b7eff7b4c3815ae16abf91c7ea"},
+    {file = "argon2_cffi-23.1.0.tar.gz", hash = "sha256:879c3e79a2729ce768ebb7d36d4609e3a78a4ca2ec3a9f12286ca057e3d0db08"},
+]
 
 [package.dependencies]
 argon2-cffi-bindings = "*"
 
 [package.extras]
-dev = ["cogapp", "coverage[toml] (>=5.0.2)", "furo", "hypothesis", "pre-commit", "pytest", "sphinx", "sphinx-notfound-page", "tomli"]
-docs = ["furo", "sphinx", "sphinx-notfound-page"]
-tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pytest"]
+dev = ["argon2-cffi[tests,typing]", "tox (>4)"]
+docs = ["furo", "myst-parser", "sphinx", "sphinx-copybutton", "sphinx-notfound-page"]
+tests = ["hypothesis", "pytest"]
+typing = ["mypy"]
 
 [[package]]
 name = "argon2-cffi-bindings"
 version = "21.2.0"
 description = "Low-level CFFI bindings for Argon2"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "argon2-cffi-bindings-21.2.0.tar.gz", hash = "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-macosx_10_9_x86_64.whl", hash = "sha256:ccb949252cb2ab3a08c02024acb77cfb179492d5701c7cbdbfd776124d4d2367"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:9524464572e12979364b7d600abf96181d3541da11e23ddf565a32e70bd4dc0d"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:b746dba803a79238e925d9046a63aa26bf86ab2a2fe74ce6b009a1c3f5c8f2ae"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:58ed19212051f49a523abb1dbe954337dc82d947fb6e5a0da60f7c8471a8476c"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-musllinux_1_1_aarch64.whl", hash = "sha256:bd46088725ef7f58b5a1ef7ca06647ebaf0eb4baff7d1d0d177c6cc8744abd86"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-musllinux_1_1_i686.whl", hash = "sha256:8cd69c07dd875537a824deec19f978e0f2078fdda07fd5c42ac29668dda5f40f"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-musllinux_1_1_x86_64.whl", hash = "sha256:f1152ac548bd5b8bcecfb0b0371f082037e47128653df2e8ba6e914d384f3c3e"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-win32.whl", hash = "sha256:603ca0aba86b1349b147cab91ae970c63118a0f30444d4bc80355937c950c082"},
+    {file = "argon2_cffi_bindings-21.2.0-cp36-abi3-win_amd64.whl", hash = "sha256:b2ef1c30440dbbcba7a5dc3e319408b59676e2e039e2ae11a8775ecf482b192f"},
+    {file = "argon2_cffi_bindings-21.2.0-cp38-abi3-macosx_10_9_universal2.whl", hash = "sha256:e415e3f62c8d124ee16018e491a009937f8cf7ebf5eb430ffc5de21b900dad93"},
+    {file = "argon2_cffi_bindings-21.2.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl", hash = "sha256:3e385d1c39c520c08b53d63300c3ecc28622f076f4c2b0e6d7e796e9f6502194"},
+    {file = "argon2_cffi_bindings-21.2.0-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:2c3e3cc67fdb7d82c4718f19b4e7a87123caf8a93fde7e23cf66ac0337d3cb3f"},
+    {file = "argon2_cffi_bindings-21.2.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:6a22ad9800121b71099d0fb0a65323810a15f2e292f2ba450810a7316e128ee5"},
+    {file = "argon2_cffi_bindings-21.2.0-pp37-pypy37_pp73-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:f9f8b450ed0547e3d473fdc8612083fd08dd2120d6ac8f73828df9b7d45bb351"},
+    {file = "argon2_cffi_bindings-21.2.0-pp37-pypy37_pp73-win_amd64.whl", hash = "sha256:93f9bf70084f97245ba10ee36575f0c3f1e7d7724d67d8e5b08e61787c320ed7"},
+    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl", hash = "sha256:3b9ef65804859d335dc6b31582cad2c5166f0c3e7975f324d9ffaa34ee7e6583"},
+    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:d4966ef5848d820776f5f562a7d45fdd70c2f330c961d0d745b784034bd9f48d"},
+    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:20ef543a89dee4db46a1a6e206cd015360e5a75822f76df533845c3cbaf72670"},
+    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:ed2937d286e2ad0cc79a7087d3c272832865f779430e0cc2b4f3718d3159b0cb"},
+    {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-win_amd64.whl", hash = "sha256:5e00316dabdaea0b2dd82d141cc66889ced0cdcbfa599e8b471cf22c620c329a"},
+]
 
 [package.dependencies]
 cffi = ">=1.0.1"
@@ -84,22 +124,33 @@ tests = ["pytest"]
 
 [[package]]
 name = "arrow"
-version = "1.2.3"
+version = "1.3.0"
 description = "Better dates & times for Python"
-category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
+files = [
+    {file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"},
+    {file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"},
+]
 
 [package.dependencies]
 python-dateutil = ">=2.7.0"
+types-python-dateutil = ">=2.8.10"
+
+[package.extras]
+doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
+test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
 
 [[package]]
 name = "astroid"
-version = "2.15.6"
+version = "2.15.8"
 description = "An abstract syntax tree for Python with inference support."
-category = "dev"
 optional = false
 python-versions = ">=3.7.2"
+files = [
+    {file = "astroid-2.15.8-py3-none-any.whl", hash = "sha256:1aa149fc5c6589e3d0ece885b4491acd80af4f087baafa3fb5203b113e68cd3c"},
+    {file = "astroid-2.15.8.tar.gz", hash = "sha256:6c107453dffee9055899705de3c9ead36e74119cee151e5a9aaf7f0b0e020a6a"},
+]
 
 [package.dependencies]
 lazy-object-proxy = ">=1.4.0"
@@ -108,25 +159,46 @@ wrapt = {version = ">=1.11,<2", markers = "python_version < \"3.11\""}
 
 [[package]]
 name = "asttokens"
-version = "2.2.1"
+version = "2.4.1"
 description = "Annotate AST trees with source code positions"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "asttokens-2.4.1-py2.py3-none-any.whl", hash = "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24"},
+    {file = "asttokens-2.4.1.tar.gz", hash = "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0"},
+]
 
 [package.dependencies]
-six = "*"
+six = ">=1.12.0"
 
 [package.extras]
-test = ["astroid", "pytest"]
+astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"]
+test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
+
+[[package]]
+name = "async-lru"
+version = "2.0.4"
+description = "Simple LRU cache for asyncio"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "async-lru-2.0.4.tar.gz", hash = "sha256:b8a59a5df60805ff63220b2a0c5b5393da5521b113cd5465a44eb037d81a5627"},
+    {file = "async_lru-2.0.4-py3-none-any.whl", hash = "sha256:ff02944ce3c288c5be660c42dbcca0742b32c3b279d6dceda655190240b99224"},
+]
+
+[package.dependencies]
+typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""}
 
 [[package]]
 name = "attrs"
 version = "23.1.0"
 description = "Classes Without Boilerplate"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "attrs-23.1.0-py3-none-any.whl", hash = "sha256:1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04"},
+    {file = "attrs-23.1.0.tar.gz", hash = "sha256:6279836d581513a26f1bf235f9acd333bc9115683f14f7e8fae46c98fc50e015"},
+]
 
 [package.extras]
 cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
@@ -137,27 +209,28 @@ tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pyte
 
 [[package]]
 name = "babel"
-version = "2.12.1"
+version = "2.13.1"
 description = "Internationalization utilities"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "Babel-2.13.1-py3-none-any.whl", hash = "sha256:7077a4984b02b6727ac10f1f7294484f737443d7e2e66c5e4380e41a3ae0b4ed"},
+    {file = "Babel-2.13.1.tar.gz", hash = "sha256:33e0952d7dd6374af8dbf6768cc4ddf3ccfefc244f9986d4074704f2fbd18900"},
+]
 
-[[package]]
-name = "backcall"
-version = "0.2.0"
-description = "Specifications for callback functions passed in to an API"
-category = "main"
-optional = false
-python-versions = "*"
+[package.extras]
+dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
 
 [[package]]
 name = "beautifulsoup4"
 version = "4.12.2"
 description = "Screen-scraping library"
-category = "main"
 optional = false
 python-versions = ">=3.6.0"
+files = [
+    {file = "beautifulsoup4-4.12.2-py3-none-any.whl", hash = "sha256:bd2520ca0d9d7d12694a53d44ac482d181b4ec1888909b035a3dbf40d0f57d4a"},
+    {file = "beautifulsoup4-4.12.2.tar.gz", hash = "sha256:492bbc69dca35d12daac71c4db1bfff0c876c00ef4a2ffacce226d4638eb72da"},
+]
 
 [package.dependencies]
 soupsieve = ">1.2"
@@ -168,11 +241,30 @@ lxml = ["lxml"]
 
 [[package]]
 name = "black"
-version = "23.7.0"
+version = "23.10.1"
 description = "The uncompromising code formatter."
-category = "dev"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "black-23.10.1-cp310-cp310-macosx_10_16_arm64.whl", hash = "sha256:ec3f8e6234c4e46ff9e16d9ae96f4ef69fa328bb4ad08198c8cee45bb1f08c69"},
+    {file = "black-23.10.1-cp310-cp310-macosx_10_16_x86_64.whl", hash = "sha256:1b917a2aa020ca600483a7b340c165970b26e9029067f019e3755b56e8dd5916"},
+    {file = "black-23.10.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:9c74de4c77b849e6359c6f01987e94873c707098322b91490d24296f66d067dc"},
+    {file = "black-23.10.1-cp310-cp310-win_amd64.whl", hash = "sha256:7b4d10b0f016616a0d93d24a448100adf1699712fb7a4efd0e2c32bbb219b173"},
+    {file = "black-23.10.1-cp311-cp311-macosx_10_16_arm64.whl", hash = "sha256:b15b75fc53a2fbcac8a87d3e20f69874d161beef13954747e053bca7a1ce53a0"},
+    {file = "black-23.10.1-cp311-cp311-macosx_10_16_x86_64.whl", hash = "sha256:e293e4c2f4a992b980032bbd62df07c1bcff82d6964d6c9496f2cd726e246ace"},
+    {file = "black-23.10.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:7d56124b7a61d092cb52cce34182a5280e160e6aff3137172a68c2c2c4b76bcb"},
+    {file = "black-23.10.1-cp311-cp311-win_amd64.whl", hash = "sha256:3f157a8945a7b2d424da3335f7ace89c14a3b0625e6593d21139c2d8214d55ce"},
+    {file = "black-23.10.1-cp38-cp38-macosx_10_16_arm64.whl", hash = "sha256:cfcce6f0a384d0da692119f2d72d79ed07c7159879d0bb1bb32d2e443382bf3a"},
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+]
 
 [package.dependencies]
 click = ">=8.0.0"
@@ -181,7 +273,7 @@ packaging = ">=22.0"
 pathspec = ">=0.9.0"
 platformdirs = ">=2"
 tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
-typing-extensions = {version = ">=3.10.0.0", markers = "python_version < \"3.10\""}
+typing-extensions = {version = ">=4.0.1", markers = "python_version < \"3.11\""}
 
 [package.extras]
 colorama = ["colorama (>=0.4.3)"]
@@ -191,61 +283,217 @@ uvloop = ["uvloop (>=0.15.2)"]
 
 [[package]]
 name = "bleach"
-version = "6.0.0"
+version = "6.1.0"
 description = "An easy safelist-based HTML-sanitizing tool."
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
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+]
 
 [package.dependencies]
 six = ">=1.9.0"
 webencodings = "*"
 
 [package.extras]
-css = ["tinycss2 (>=1.1.0,<1.2)"]
+css = ["tinycss2 (>=1.1.0,<1.3)"]
 
 [[package]]
 name = "cachetools"
-version = "5.3.1"
+version = "5.3.2"
 description = "Extensible memoizing collections and decorators"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
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+]
 
 [[package]]
 name = "certifi"
-version = "2023.5.7"
+version = "2023.7.22"
 description = "Python package for providing Mozilla's CA Bundle."
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
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+version = "1.16.0"
 description = "Foreign Function Interface for Python calling C code."
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 optional = false
-python-versions = "*"
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 [package.dependencies]
 pycparser = "*"
 
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+]
 
 [[package]]
 name = "click"
-version = "8.1.5"
+version = "8.1.7"
 description = "Composable command line interface toolkit"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "click-8.1.7-py3-none-any.whl", hash = "sha256:ae74fb96c20a0277a1d615f1e4d73c8414f5a98db8b799a7931d1582f3390c28"},
+    {file = "click-8.1.7.tar.gz", hash = "sha256:ca9853ad459e787e2192211578cc907e7594e294c7ccc834310722b41b9ca6de"},
+]
 
 [package.dependencies]
 colorama = {version = "*", markers = "platform_system == \"Windows\""}
@@ -254,9 +502,12 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
 name = "click-log"
 version = "0.4.0"
 description = "Logging integration for Click"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "click-log-0.4.0.tar.gz", hash = "sha256:3970f8570ac54491237bcdb3d8ab5e3eef6c057df29f8c3d1151a51a9c23b975"},
+    {file = "click_log-0.4.0-py2.py3-none-any.whl", hash = "sha256:a43e394b528d52112af599f2fc9e4b7cf3c15f94e53581f74fa6867e68c91756"},
+]
 
 [package.dependencies]
 click = "*"
@@ -265,9 +516,12 @@ click = "*"
 name = "clickclick"
 version = "20.10.2"
 description = "Click utility functions"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "clickclick-20.10.2-py2.py3-none-any.whl", hash = "sha256:c8f33e6d9ec83f68416dd2136a7950125bd256ec39ccc9a85c6e280a16be2bb5"},
+    {file = "clickclick-20.10.2.tar.gz", hash = "sha256:4efb13e62353e34c5eef7ed6582c4920b418d7dedc86d819e22ee089ba01802c"},
+]
 
 [package.dependencies]
 click = ">=4.0"
@@ -277,20 +531,26 @@ PyYAML = ">=3.11"
 name = "colorama"
 version = "0.4.6"
 description = "Cross-platform colored terminal text."
-category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
+files = [
+    {file = "colorama-0.4.6-py2.py3-none-any.whl", hash = "sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6"},
+    {file = "colorama-0.4.6.tar.gz", hash = "sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44"},
+]
 
 [[package]]
 name = "comm"
-version = "0.1.3"
+version = "0.1.4"
 description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-python etc."
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "comm-0.1.4-py3-none-any.whl", hash = "sha256:6d52794cba11b36ed9860999cd10fd02d6b2eac177068fdd585e1e2f8a96e67a"},
+    {file = "comm-0.1.4.tar.gz", hash = "sha256:354e40a59c9dd6db50c5cc6b4acc887d82e9603787f83b68c01a80a923984d15"},
+]
 
 [package.dependencies]
-traitlets = ">=5.3"
+traitlets = ">=4"
 
 [package.extras]
 lint = ["black (>=22.6.0)", "mdformat (>0.7)", "mdformat-gfm (>=0.3.5)", "ruff (>=0.0.156)"]
@@ -301,9 +561,12 @@ typing = ["mypy (>=0.990)"]
 name = "connexion"
 version = "2.14.2"
 description = "Connexion - API first applications with OpenAPI/Swagger and Flask"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "connexion-2.14.2-py2.py3-none-any.whl", hash = "sha256:a73b96a0e07b16979a42cde7c7e26afe8548099e352cf350f80c57185e0e0b36"},
+    {file = "connexion-2.14.2.tar.gz", hash = "sha256:dbc06f52ebeebcf045c9904d570f24377e8bbd5a6521caef15a06f634cf85646"},
+]
 
 [package.dependencies]
 clickclick = ">=1.2,<21"
@@ -326,11 +589,64 @@ tests = ["MarkupSafe (>=0.23)", "aiohttp (>=2.3.10,<4)", "aiohttp-jinja2 (>=0.14
 
 [[package]]
 name = "coverage"
-version = "7.2.7"
+version = "7.3.2"
 description = "Code coverage measurement for Python"
-category = "dev"
 optional = false
-python-versions = ">=3.7"
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 tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.11.0a6\" and extra == \"toml\""}
@@ -340,11 +656,35 @@ toml = ["tomli"]
 
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 description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
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 python-versions = ">=3.7"
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 [package.dependencies]
 cffi = ">=1.12"
@@ -363,9 +703,12 @@ test-randomorder = ["pytest-randomly"]
 name = "dateparser"
 version = "1.1.8"
 description = "Date parsing library designed to parse dates from HTML pages"
-category = "main"
 optional = false
 python-versions = ">=3.7"
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+]
 
 [package.dependencies]
 python-dateutil = "*"
@@ -380,35 +723,63 @@ langdetect = ["langdetect"]
 
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+version = "1.8.0"
 description = "An implementation of the Debug Adapter Protocol for Python"
-category = "main"
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-python-versions = ">=3.7"
+python-versions = ">=3.8"
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+    {file = "debugpy-1.8.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:125b9a637e013f9faac0a3d6a82bd17c8b5d2c875fb6b7e2772c5aba6d082332"},
+    {file = "debugpy-1.8.0-cp39-cp39-win32.whl", hash = "sha256:57161629133113c97b387382045649a2b985a348f0c9366e22217c87b68b73c6"},
+    {file = "debugpy-1.8.0-cp39-cp39-win_amd64.whl", hash = "sha256:e3412f9faa9ade82aa64a50b602544efcba848c91384e9f93497a458767e6926"},
+    {file = "debugpy-1.8.0-py2.py3-none-any.whl", hash = "sha256:9c9b0ac1ce2a42888199df1a1906e45e6f3c9555497643a85e0bf2406e3ffbc4"},
+    {file = "debugpy-1.8.0.zip", hash = "sha256:12af2c55b419521e33d5fb21bd022df0b5eb267c3e178f1d374a63a2a6bdccd0"},
+]
 
 [[package]]
 name = "decorator"
 version = "5.1.1"
 description = "Decorators for Humans"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "decorator-5.1.1-py3-none-any.whl", hash = "sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186"},
+    {file = "decorator-5.1.1.tar.gz", hash = "sha256:637996211036b6385ef91435e4fae22989472f9d571faba8927ba8253acbc330"},
+]
 
 [[package]]
 name = "defusedxml"
 version = "0.7.1"
 description = "XML bomb protection for Python stdlib modules"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+files = [
+    {file = "defusedxml-0.7.1-py2.py3-none-any.whl", hash = "sha256:a352e7e428770286cc899e2542b6cdaedb2b4953ff269a210103ec58f6198a61"},
+    {file = "defusedxml-0.7.1.tar.gz", hash = "sha256:1bb3032db185915b62d7c6209c5a8792be6a32ab2fedacc84e01b52c51aa3e69"},
+]
 
 [[package]]
 name = "deprecated"
 version = "1.2.14"
 description = "Python @deprecated decorator to deprecate old python classes, functions or methods."
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
+    {file = "Deprecated-1.2.14-py2.py3-none-any.whl", hash = "sha256:6fac8b097794a90302bdbb17b9b815e732d3c4720583ff1b198499d78470466c"},
+    {file = "Deprecated-1.2.14.tar.gz", hash = "sha256:e5323eb936458dccc2582dc6f9c322c852a775a27065ff2b0c4970b9d53d01b3"},
+]
 
 [package.dependencies]
 wrapt = ">=1.10,<2"
@@ -420,20 +791,26 @@ dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "sphinx (<2)", "tox"]
 name = "deprecation"
 version = "2.1.0"
 description = "A library to handle automated deprecations"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "deprecation-2.1.0-py2.py3-none-any.whl", hash = "sha256:a10811591210e1fb0e768a8c25517cabeabcba6f0bf96564f8ff45189f90b14a"},
+    {file = "deprecation-2.1.0.tar.gz", hash = "sha256:72b3bde64e5d778694b0cf68178aed03d15e15477116add3fb773e581f9518ff"},
+]
 
 [package.dependencies]
 packaging = "*"
 
 [[package]]
 name = "dill"
-version = "0.3.6"
-description = "serialize all of python"
-category = "main"
+version = "0.3.7"
+description = "serialize all of Python"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "dill-0.3.7-py3-none-any.whl", hash = "sha256:76b122c08ef4ce2eedcd4d1abd8e641114bfc6c2867f49f3c41facf65bf19f5e"},
+    {file = "dill-0.3.7.tar.gz", hash = "sha256:cc1c8b182eb3013e24bd475ff2e9295af86c1a38eb1aff128dac8962a9ce3c03"},
+]
 
 [package.extras]
 graph = ["objgraph (>=1.7.2)"]
@@ -442,79 +819,103 @@ graph = ["objgraph (>=1.7.2)"]
 name = "docutils"
 version = "0.20.1"
 description = "Docutils -- Python Documentation Utilities"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "docutils-0.20.1-py3-none-any.whl", hash = "sha256:96f387a2c5562db4476f09f13bbab2192e764cac08ebbf3a34a95d9b1e4a59d6"},
+    {file = "docutils-0.20.1.tar.gz", hash = "sha256:f08a4e276c3a1583a86dce3e34aba3fe04d02bba2dd51ed16106244e8a923e3b"},
+]
 
 [[package]]
 name = "entrypoints"
 version = "0.4"
 description = "Discover and load entry points from installed packages."
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "entrypoints-0.4-py3-none-any.whl", hash = "sha256:f174b5ff827504fd3cd97cc3f8649f3693f51538c7e4bdf3ef002c8429d42f9f"},
+    {file = "entrypoints-0.4.tar.gz", hash = "sha256:b706eddaa9218a19ebcd67b56818f05bb27589b1ca9e8d797b74affad4ccacd4"},
+]
 
 [[package]]
 name = "et-xmlfile"
 version = "1.1.0"
 description = "An implementation of lxml.xmlfile for the standard library"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "et_xmlfile-1.1.0-py3-none-any.whl", hash = "sha256:a2ba85d1d6a74ef63837eed693bcb89c3f752169b0e3e7ae5b16ca5e1b3deada"},
+    {file = "et_xmlfile-1.1.0.tar.gz", hash = "sha256:8eb9e2bc2f8c97e37a2dc85a09ecdcdec9d8a396530a6d5a33b30b9a92da0c5c"},
+]
 
 [[package]]
 name = "exceptiongroup"
-version = "1.1.2"
+version = "1.1.3"
 description = "Backport of PEP 654 (exception groups)"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "exceptiongroup-1.1.3-py3-none-any.whl", hash = "sha256:343280667a4585d195ca1cf9cef84a4e178c4b6cf2274caef9859782b567d5e3"},
+    {file = "exceptiongroup-1.1.3.tar.gz", hash = "sha256:097acd85d473d75af5bb98e41b61ff7fe35efe6675e4f9370ec6ec5126d160e9"},
+]
 
 [package.extras]
 test = ["pytest (>=6)"]
 
 [[package]]
 name = "executing"
-version = "1.2.0"
+version = "2.0.1"
 description = "Get the currently executing AST node of a frame, and other information"
-category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.5"
+files = [
+    {file = "executing-2.0.1-py2.py3-none-any.whl", hash = "sha256:eac49ca94516ccc753f9fb5ce82603156e590b27525a8bc32cce8ae302eb61bc"},
+    {file = "executing-2.0.1.tar.gz", hash = "sha256:35afe2ce3affba8ee97f2d69927fa823b08b472b7b994e36a52a964b93d16147"},
+]
 
 [package.extras]
-tests = ["asttokens", "littleutils", "pytest", "rich"]
+tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipython", "littleutils", "pytest", "rich"]
 
 [[package]]
 name = "fastjsonschema"
-version = "2.17.1"
+version = "2.18.1"
 description = "Fastest Python implementation of JSON schema"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "fastjsonschema-2.18.1-py3-none-any.whl", hash = "sha256:aec6a19e9f66e9810ab371cc913ad5f4e9e479b63a7072a2cd060a9369e329a8"},
+    {file = "fastjsonschema-2.18.1.tar.gz", hash = "sha256:06dc8680d937628e993fa0cd278f196d20449a1adc087640710846b324d422ea"},
+]
 
 [package.extras]
 devel = ["colorama", "json-spec", "jsonschema", "pylint", "pytest", "pytest-benchmark", "pytest-cache", "validictory"]
 
 [[package]]
 name = "flake8"
-version = "6.0.0"
+version = "6.1.0"
 description = "the modular source code checker: pep8 pyflakes and co"
-category = "dev"
 optional = false
 python-versions = ">=3.8.1"
+files = [
+    {file = "flake8-6.1.0-py2.py3-none-any.whl", hash = "sha256:ffdfce58ea94c6580c77888a86506937f9a1a227dfcd15f245d694ae20a6b6e5"},
+    {file = "flake8-6.1.0.tar.gz", hash = "sha256:d5b3857f07c030bdb5bf41c7f53799571d75c4491748a3adcd47de929e34cd23"},
+]
 
 [package.dependencies]
 mccabe = ">=0.7.0,<0.8.0"
-pycodestyle = ">=2.10.0,<2.11.0"
-pyflakes = ">=3.0.0,<3.1.0"
+pycodestyle = ">=2.11.0,<2.12.0"
+pyflakes = ">=3.1.0,<3.2.0"
 
 [[package]]
 name = "flask"
 version = "2.1.3"
 description = "A simple framework for building complex web applications."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "Flask-2.1.3-py3-none-any.whl", hash = "sha256:9013281a7402ad527f8fd56375164f3aa021ecfaff89bfe3825346c24f87e04c"},
+    {file = "Flask-2.1.3.tar.gz", hash = "sha256:15972e5017df0575c3d6c090ba168b6db90259e620ac8d7ea813a396bad5b6cb"},
+]
 
 [package.dependencies]
 click = ">=8.0"
@@ -531,9 +932,12 @@ dotenv = ["python-dotenv"]
 name = "flask-cors"
 version = "3.0.10"
 description = "A Flask extension adding a decorator for CORS support"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "Flask-Cors-3.0.10.tar.gz", hash = "sha256:b60839393f3b84a0f3746f6cdca56c1ad7426aa738b70d6c61375857823181de"},
+    {file = "Flask_Cors-3.0.10-py2.py3-none-any.whl", hash = "sha256:74efc975af1194fc7891ff5cd85b0f7478be4f7f59fe158102e91abb72bb4438"},
+]
 
 [package.dependencies]
 Flask = ">=0.9"
@@ -543,17 +947,23 @@ Six = "*"
 name = "fqdn"
 version = "1.5.1"
 description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4"
+files = [
+    {file = "fqdn-1.5.1-py3-none-any.whl", hash = "sha256:3a179af3761e4df6eb2e026ff9e1a3033d3587bf980a0b1b2e1e5d08d7358014"},
+    {file = "fqdn-1.5.1.tar.gz", hash = "sha256:105ed3677e767fb5ca086a0c1f4bb66ebc3c100be518f0e0d755d9eae164d89f"},
+]
 
 [[package]]
 name = "google-api-core"
-version = "2.11.1"
+version = "2.12.0"
 description = "Google API client core library"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "google-api-core-2.12.0.tar.gz", hash = "sha256:c22e01b1e3c4dcd90998494879612c38d0a3411d1f7b679eb89e2abe3ce1f553"},
+    {file = "google_api_core-2.12.0-py3-none-any.whl", hash = "sha256:ec6054f7d64ad13b41e43d96f735acbd763b0f3b695dabaa2d579673f6a6e160"},
+]
 
 [package.dependencies]
 google-auth = ">=2.14.1,<3.0.dev0"
@@ -568,14 +978,17 @@ grpcio-gcp = ["grpcio-gcp (>=0.2.2,<1.0.dev0)"]
 
 [[package]]
 name = "google-api-python-client"
-version = "2.93.0"
+version = "2.106.0"
 description = "Google API Client Library for Python"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "google-api-python-client-2.106.0.tar.gz", hash = "sha256:f6a3862be2f6e5e0536d7bd47b5af3f24ac0b9147c76c830cafb3329d71d5724"},
+    {file = "google_api_python_client-2.106.0-py2.py3-none-any.whl", hash = "sha256:c47c0dae5dd20aa43e4ea184566fe59d0c8fd0b86dd223b29040d8ea4f7ed6ea"},
+]
 
 [package.dependencies]
-google-api-core = ">=1.31.5,<2.0.0 || >2.3.0,<3.0.0.dev0"
+google-api-core = ">=1.31.5,<2.0.dev0 || >2.3.0,<3.0.0.dev0"
 google-auth = ">=1.19.0,<3.0.0.dev0"
 google-auth-httplib2 = ">=0.1.0"
 httplib2 = ">=0.15.0,<1.dev0"
@@ -583,18 +996,19 @@ uritemplate = ">=3.0.1,<5"
 
 [[package]]
 name = "google-auth"
-version = "2.22.0"
+version = "2.23.4"
 description = "Google Authentication Library"
-category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
+files = [
+    {file = "google-auth-2.23.4.tar.gz", hash = "sha256:79905d6b1652187def79d491d6e23d0cbb3a21d3c7ba0dbaa9c8a01906b13ff3"},
+    {file = "google_auth-2.23.4-py2.py3-none-any.whl", hash = "sha256:d4bbc92fe4b8bfd2f3e8d88e5ba7085935da208ee38a134fc280e7ce682a05f2"},
+]
 
 [package.dependencies]
 cachetools = ">=2.0.0,<6.0"
 pyasn1-modules = ">=0.2.1"
 rsa = ">=3.1.4,<5"
-six = ">=1.9.0"
-urllib3 = "<2.0"
 
 [package.extras]
 aiohttp = ["aiohttp (>=3.6.2,<4.0.0.dev0)", "requests (>=2.20.0,<3.0.0.dev0)"]
@@ -605,24 +1019,29 @@ requests = ["requests (>=2.20.0,<3.0.0.dev0)"]
 
 [[package]]
 name = "google-auth-httplib2"
-version = "0.1.0"
+version = "0.1.1"
 description = "Google Authentication Library: httplib2 transport"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "google-auth-httplib2-0.1.1.tar.gz", hash = "sha256:c64bc555fdc6dd788ea62ecf7bccffcf497bf77244887a3f3d7a5a02f8e3fc29"},
+    {file = "google_auth_httplib2-0.1.1-py2.py3-none-any.whl", hash = "sha256:42c50900b8e4dcdf8222364d1f0efe32b8421fb6ed72f2613f12f75cc933478c"},
+]
 
 [package.dependencies]
 google-auth = "*"
-httplib2 = ">=0.15.0"
-six = "*"
+httplib2 = ">=0.19.0"
 
 [[package]]
 name = "google-auth-oauthlib"
 version = "0.8.0"
 description = "Google Authentication Library"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "google-auth-oauthlib-0.8.0.tar.gz", hash = "sha256:81056a310fb1c4a3e5a7e1a443e1eb96593c6bbc55b26c0261e4d3295d3e6593"},
+    {file = "google_auth_oauthlib-0.8.0-py2.py3-none-any.whl", hash = "sha256:40cc612a13c3336d5433e94e2adb42a0c88f6feb6c55769e44500fc70043a576"},
+]
 
 [package.dependencies]
 google-auth = ">=2.15.0"
@@ -633,11 +1052,14 @@ tool = ["click (>=6.0.0)"]
 
 [[package]]
 name = "googleapis-common-protos"
-version = "1.59.1"
+version = "1.61.0"
 description = "Common protobufs used in Google APIs"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "googleapis-common-protos-1.61.0.tar.gz", hash = "sha256:8a64866a97f6304a7179873a465d6eee97b7a24ec6cfd78e0f575e96b821240b"},
+    {file = "googleapis_common_protos-1.61.0-py2.py3-none-any.whl", hash = "sha256:22f1915393bb3245343f6efe87f6fe868532efc12aa26b391b15132e1279f1c0"},
+]
 
 [package.dependencies]
 protobuf = ">=3.19.5,<3.20.0 || >3.20.0,<3.20.1 || >3.20.1,<4.21.1 || >4.21.1,<4.21.2 || >4.21.2,<4.21.3 || >4.21.3,<4.21.4 || >4.21.4,<4.21.5 || >4.21.5,<5.0.0.dev0"
@@ -649,9 +1071,12 @@ grpc = ["grpcio (>=1.44.0,<2.0.0.dev0)"]
 name = "graphviz"
 version = "0.20.1"
 description = "Simple Python interface for Graphviz"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "graphviz-0.20.1-py3-none-any.whl", hash = "sha256:587c58a223b51611c0cf461132da386edd896a029524ca61a1462b880bf97977"},
+    {file = "graphviz-0.20.1.zip", hash = "sha256:8c58f14adaa3b947daf26c19bc1e98c4e0702cdc31cf99153e6f06904d492bf8"},
+]
 
 [package.extras]
 dev = ["flake8", "pep8-naming", "tox (>=3)", "twine", "wheel"]
@@ -662,9 +1087,12 @@ test = ["coverage", "mock (>=4)", "pytest (>=7)", "pytest-cov", "pytest-mock (>=
 name = "great-expectations"
 version = "0.15.50"
 description = "Always know what to expect from your data."
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "great_expectations-0.15.50-py3-none-any.whl", hash = "sha256:bda4c6bfe199dc0610273a1c160aab3876583266b1957a34a7edb72b055fd13d"},
+    {file = "great_expectations-0.15.50.tar.gz", hash = "sha256:0b00c974410d598a97b4c662d7955d80d6268e35c5f3893ddb546f75432412db"},
+]
 
 [package.dependencies]
 altair = ">=4.0.0,<4.2.1"
@@ -731,23 +1159,84 @@ vertica = ["sqlalchemy (>=1.3.18,<2.0.0)", "sqlalchemy-vertica-python (>=0.5.10)
 
 [[package]]
 name = "greenlet"
-version = "2.0.2"
+version = "3.0.1"
 description = "Lightweight in-process concurrent programming"
-category = "main"
 optional = false
-python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*"
+python-versions = ">=3.7"
+files = [
+    {file = "greenlet-3.0.1-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:f89e21afe925fcfa655965ca8ea10f24773a1791400989ff32f467badfe4a064"},
+    {file = "greenlet-3.0.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:28e89e232c7593d33cac35425b58950789962011cc274aa43ef8865f2e11f46d"},
+    {file = "greenlet-3.0.1-cp310-cp310-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:b8ba29306c5de7717b5761b9ea74f9c72b9e2b834e24aa984da99cbfc70157fd"},
+    {file = "greenlet-3.0.1-cp310-cp310-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:19bbdf1cce0346ef7341705d71e2ecf6f41a35c311137f29b8a2dc2341374565"},
+    {file = "greenlet-3.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:599daf06ea59bfedbec564b1692b0166a0045f32b6f0933b0dd4df59a854caf2"},
+    {file = "greenlet-3.0.1-cp310-cp310-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:b641161c302efbb860ae6b081f406839a8b7d5573f20a455539823802c655f63"},
+    {file = "greenlet-3.0.1-cp310-cp310-musllinux_1_1_aarch64.whl", hash = "sha256:d57e20ba591727da0c230ab2c3f200ac9d6d333860d85348816e1dca4cc4792e"},
+    {file = "greenlet-3.0.1-cp310-cp310-musllinux_1_1_x86_64.whl", hash = "sha256:5805e71e5b570d490938d55552f5a9e10f477c19400c38bf1d5190d760691846"},
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+]
 
 [package.extras]
-docs = ["Sphinx", "docutils (<0.18)"]
+docs = ["Sphinx"]
 test = ["objgraph", "psutil"]
 
 [[package]]
 name = "httplib2"
 version = "0.22.0"
 description = "A comprehensive HTTP client library."
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
+    {file = "httplib2-0.22.0-py3-none-any.whl", hash = "sha256:14ae0a53c1ba8f3d37e9e27cf37eabb0fb9980f435ba405d546948b009dd64dc"},
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+]
 
 [package.dependencies]
 pyparsing = {version = ">=2.4.2,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.0.2 || >3.0.2,<3.0.3 || >3.0.3,<4", markers = "python_version > \"3.0\""}
@@ -756,57 +1245,75 @@ pyparsing = {version = ">=2.4.2,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.0.2 || >3.0
 name = "idna"
 version = "3.4"
 description = "Internationalized Domain Names in Applications (IDNA)"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "idna-3.4-py3-none-any.whl", hash = "sha256:90b77e79eaa3eba6de819a0c442c0b4ceefc341a7a2ab77d7562bf49f425c5c2"},
+    {file = "idna-3.4.tar.gz", hash = "sha256:814f528e8dead7d329833b91c5faa87d60bf71824cd12a7530b5526063d02cb4"},
+]
 
 [[package]]
 name = "imagesize"
 version = "1.4.1"
 description = "Getting image size from png/jpeg/jpeg2000/gif file"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
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+]
 
 [[package]]
 name = "importlib-metadata"
-version = "4.13.0"
+version = "6.8.0"
 description = "Read metadata from Python packages"
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
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+    {file = "importlib_metadata-6.8.0.tar.gz", hash = "sha256:dbace7892d8c0c4ac1ad096662232f831d4e64f4c4545bd53016a3e9d4654743"},
+]
 
 [package.dependencies]
 zipp = ">=0.5"
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)"]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
 perf = ["ipython"]
-testing = ["flake8 (<5)", "flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"]
+testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"]
 
 [[package]]
 name = "inflection"
 version = "0.5.1"
 description = "A port of Ruby on Rails inflector to Python"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "inflection-0.5.1-py2.py3-none-any.whl", hash = "sha256:f38b2b640938a4f35ade69ac3d053042959b62a0f1076a5bbaa1b9526605a8a2"},
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+]
 
 [[package]]
 name = "iniconfig"
 version = "2.0.0"
 description = "brain-dead simple config-ini parsing"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "iniconfig-2.0.0-py3-none-any.whl", hash = "sha256:b6a85871a79d2e3b22d2d1b94ac2824226a63c6b741c88f7ae975f18b6778374"},
+    {file = "iniconfig-2.0.0.tar.gz", hash = "sha256:2d91e135bf72d31a410b17c16da610a82cb55f6b0477d1a902134b24a455b8b3"},
+]
 
 [[package]]
 name = "interrogate"
 version = "1.5.0"
 description = "Interrogate a codebase for docstring coverage."
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "interrogate-1.5.0-py3-none-any.whl", hash = "sha256:a4ccc5cbd727c74acc98dee6f5e79ef264c0bcfa66b68d4e123069b2af89091a"},
+    {file = "interrogate-1.5.0.tar.gz", hash = "sha256:b6f325f0aa84ac3ac6779d8708264d366102226c5af7d69058cecffcff7a6d6c"},
+]
 
 [package.dependencies]
 attrs = "*"
@@ -824,11 +1331,14 @@ tests = ["pytest", "pytest-cov", "pytest-mock"]
 
 [[package]]
 name = "ipykernel"
-version = "6.24.0"
+version = "6.26.0"
 description = "IPython Kernel for Jupyter"
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "ipykernel-6.26.0-py3-none-any.whl", hash = "sha256:3ba3dc97424b87b31bb46586b5167b3161b32d7820b9201a9e698c71e271602c"},
+    {file = "ipykernel-6.26.0.tar.gz", hash = "sha256:553856658eb8430bbe9653ea041a41bff63e9606fc4628873fc92a6cf3abd404"},
+]
 
 [package.dependencies]
 appnope = {version = "*", markers = "platform_system == \"Darwin\""}
@@ -836,7 +1346,7 @@ comm = ">=0.1.1"
 debugpy = ">=1.6.5"
 ipython = ">=7.23.1"
 jupyter-client = ">=6.1.12"
-jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
+jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
 matplotlib-inline = ">=0.1"
 nest-asyncio = "*"
 packaging = "*"
@@ -854,21 +1364,23 @@ test = ["flaky", "ipyparallel", "pre-commit", "pytest (>=7.0)", "pytest-asyncio"
 
 [[package]]
 name = "ipython"
-version = "8.14.0"
+version = "8.17.2"
 description = "IPython: Productive Interactive Computing"
-category = "main"
 optional = false
 python-versions = ">=3.9"
+files = [
+    {file = "ipython-8.17.2-py3-none-any.whl", hash = "sha256:1e4d1d666a023e3c93585ba0d8e962867f7a111af322efff6b9c58062b3e5444"},
+    {file = "ipython-8.17.2.tar.gz", hash = "sha256:126bb57e1895594bb0d91ea3090bbd39384f6fe87c3d57fd558d0670f50339bb"},
+]
 
 [package.dependencies]
 appnope = {version = "*", markers = "sys_platform == \"darwin\""}
-backcall = "*"
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
 decorator = "*"
+exceptiongroup = {version = "*", markers = "python_version < \"3.11\""}
 jedi = ">=0.16"
 matplotlib-inline = "*"
 pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
-pickleshare = "*"
 prompt-toolkit = ">=3.0.30,<3.0.37 || >3.0.37,<3.1.0"
 pygments = ">=2.4.0"
 stack-data = "*"
@@ -876,40 +1388,35 @@ traitlets = ">=5"
 typing-extensions = {version = "*", markers = "python_version < \"3.10\""}
 
 [package.extras]
-all = ["black", "curio", "docrepr", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.21)", "pandas", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "qtconsole", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "trio", "typing-extensions"]
+all = ["black", "curio", "docrepr", "exceptiongroup", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.22)", "pandas", "pickleshare", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio (<0.22)", "qtconsole", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "trio", "typing-extensions"]
 black = ["black"]
-doc = ["docrepr", "ipykernel", "matplotlib", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "typing-extensions"]
+doc = ["docrepr", "exceptiongroup", "ipykernel", "matplotlib", "pickleshare", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio (<0.22)", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "typing-extensions"]
 kernel = ["ipykernel"]
 nbconvert = ["nbconvert"]
 nbformat = ["nbformat"]
 notebook = ["ipywidgets", "notebook"]
 parallel = ["ipyparallel"]
 qtconsole = ["qtconsole"]
-test = ["pytest (<7.1)", "pytest-asyncio", "testpath"]
-test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pandas", "pytest (<7.1)", "pytest-asyncio", "testpath", "trio"]
-
-[[package]]
-name = "ipython-genutils"
-version = "0.2.0"
-description = "Vestigial utilities from IPython"
-category = "main"
-optional = false
-python-versions = "*"
+test = ["pickleshare", "pytest (<7.1)", "pytest-asyncio (<0.22)", "testpath"]
+test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.22)", "pandas", "pickleshare", "pytest (<7.1)", "pytest-asyncio (<0.22)", "testpath", "trio"]
 
 [[package]]
 name = "ipywidgets"
-version = "8.0.7"
+version = "8.1.1"
 description = "Jupyter interactive widgets"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "ipywidgets-8.1.1-py3-none-any.whl", hash = "sha256:2b88d728656aea3bbfd05d32c747cfd0078f9d7e159cf982433b58ad717eed7f"},
+    {file = "ipywidgets-8.1.1.tar.gz", hash = "sha256:40211efb556adec6fa450ccc2a77d59ca44a060f4f9f136833df59c9f538e6e8"},
+]
 
 [package.dependencies]
-ipykernel = ">=4.5.1"
+comm = ">=0.1.3"
 ipython = ">=6.1.0"
-jupyterlab-widgets = ">=3.0.7,<3.1.0"
+jupyterlab-widgets = ">=3.0.9,<3.1.0"
 traitlets = ">=4.3.1"
-widgetsnbextension = ">=4.0.7,<4.1.0"
+widgetsnbextension = ">=4.0.9,<4.1.0"
 
 [package.extras]
 test = ["ipykernel", "jsonschema", "pytest (>=3.6.0)", "pytest-cov", "pytz"]
@@ -918,9 +1425,12 @@ test = ["ipykernel", "jsonschema", "pytest (>=3.6.0)", "pytest-cov", "pytz"]
 name = "isodate"
 version = "0.6.1"
 description = "An ISO 8601 date/time/duration parser and formatter"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "isodate-0.6.1-py2.py3-none-any.whl", hash = "sha256:0751eece944162659049d35f4f549ed815792b38793f07cf73381c1c87cbed96"},
+    {file = "isodate-0.6.1.tar.gz", hash = "sha256:48c5881de7e8b0a0d648cb024c8062dc84e7b840ed81e864c7614fd3c127bde9"},
+]
 
 [package.dependencies]
 six = "*"
@@ -929,9 +1439,12 @@ six = "*"
 name = "isoduration"
 version = "20.11.0"
 description = "Operations with ISO 8601 durations"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "isoduration-20.11.0-py3-none-any.whl", hash = "sha256:b2904c2a4228c3d44f409c8ae8e2370eb21a26f7ac2ec5446df141dde3452042"},
+    {file = "isoduration-20.11.0.tar.gz", hash = "sha256:ac2f9015137935279eac671f94f89eb00584f940f5dc49462a0c4ee692ba1bd9"},
+]
 
 [package.dependencies]
 arrow = ">=0.15.0"
@@ -940,9 +1453,12 @@ arrow = ">=0.15.0"
 name = "isort"
 version = "5.12.0"
 description = "A Python utility / library to sort Python imports."
-category = "dev"
 optional = false
 python-versions = ">=3.8.0"
+files = [
+    {file = "isort-5.12.0-py3-none-any.whl", hash = "sha256:f84c2818376e66cf843d497486ea8fed8700b340f308f076c6fb1229dff318b6"},
+    {file = "isort-5.12.0.tar.gz", hash = "sha256:8bef7dde241278824a6d83f44a544709b065191b95b6e50894bdc722fcba0504"},
+]
 
 [package.extras]
 colors = ["colorama (>=0.4.3)"]
@@ -954,33 +1470,42 @@ requirements-deprecated-finder = ["pip-api", "pipreqs"]
 name = "itsdangerous"
 version = "2.1.2"
 description = "Safely pass data to untrusted environments and back."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "itsdangerous-2.1.2-py3-none-any.whl", hash = "sha256:2c2349112351b88699d8d4b6b075022c0808887cb7ad10069318a8b0bc88db44"},
+    {file = "itsdangerous-2.1.2.tar.gz", hash = "sha256:5dbbc68b317e5e42f327f9021763545dc3fc3bfe22e6deb96aaf1fc38874156a"},
+]
 
 [[package]]
 name = "jedi"
-version = "0.18.2"
+version = "0.19.1"
 description = "An autocompletion tool for Python that can be used for text editors."
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "jedi-0.19.1-py2.py3-none-any.whl", hash = "sha256:e983c654fe5c02867aef4cdfce5a2fbb4a50adc0af145f70504238f18ef5e7e0"},
+    {file = "jedi-0.19.1.tar.gz", hash = "sha256:cf0496f3651bc65d7174ac1b7d043eff454892c708a87d1b683e57b569927ffd"},
+]
 
 [package.dependencies]
-parso = ">=0.8.0,<0.9.0"
+parso = ">=0.8.3,<0.9.0"
 
 [package.extras]
 docs = ["Jinja2 (==2.11.3)", "MarkupSafe (==1.1.1)", "Pygments (==2.8.1)", "alabaster (==0.7.12)", "babel (==2.9.1)", "chardet (==4.0.0)", "commonmark (==0.8.1)", "docutils (==0.17.1)", "future (==0.18.2)", "idna (==2.10)", "imagesize (==1.2.0)", "mock (==1.0.1)", "packaging (==20.9)", "pyparsing (==2.4.7)", "pytz (==2021.1)", "readthedocs-sphinx-ext (==2.1.4)", "recommonmark (==0.5.0)", "requests (==2.25.1)", "six (==1.15.0)", "snowballstemmer (==2.1.0)", "sphinx (==1.8.5)", "sphinx-rtd-theme (==0.4.3)", "sphinxcontrib-serializinghtml (==1.1.4)", "sphinxcontrib-websupport (==1.2.4)", "urllib3 (==1.26.4)"]
-qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
-testing = ["Django (<3.1)", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
+qa = ["flake8 (==5.0.4)", "mypy (==0.971)", "types-setuptools (==67.2.0.1)"]
+testing = ["Django", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
 
 [[package]]
 name = "jeepney"
 version = "0.8.0"
 description = "Low-level, pure Python DBus protocol wrapper."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "jeepney-0.8.0-py3-none-any.whl", hash = "sha256:c0a454ad016ca575060802ee4d590dd912e35c122fa04e70306de3d076cce755"},
+    {file = "jeepney-0.8.0.tar.gz", hash = "sha256:5efe48d255973902f6badc3ce55e2aa6c5c3b3bc642059ef3a91247bcfcc5806"},
+]
 
 [package.extras]
 test = ["async-timeout", "pytest", "pytest-asyncio (>=0.17)", "pytest-trio", "testpath", "trio"]
@@ -990,9 +1515,12 @@ trio = ["async_generator", "trio"]
 name = "jinja2"
 version = "3.1.2"
 description = "A very fast and expressive template engine."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "Jinja2-3.1.2-py3-none-any.whl", hash = "sha256:6088930bfe239f0e6710546ab9c19c9ef35e29792895fed6e6e31a023a182a61"},
+    {file = "Jinja2-3.1.2.tar.gz", hash = "sha256:31351a702a408a9e7595a8fc6150fc3f43bb6bf7e319770cbc0db9df9437e852"},
+]
 
 [package.dependencies]
 MarkupSafe = ">=2.0"
@@ -1000,13 +1528,30 @@ MarkupSafe = ">=2.0"
 [package.extras]
 i18n = ["Babel (>=2.7)"]
 
+[[package]]
+name = "json5"
+version = "0.9.14"
+description = "A Python implementation of the JSON5 data format."
+optional = false
+python-versions = "*"
+files = [
+    {file = "json5-0.9.14-py2.py3-none-any.whl", hash = "sha256:740c7f1b9e584a468dbb2939d8d458db3427f2c93ae2139d05f47e453eae964f"},
+    {file = "json5-0.9.14.tar.gz", hash = "sha256:9ed66c3a6ca3510a976a9ef9b8c0787de24802724ab1860bc0153c7fdd589b02"},
+]
+
+[package.extras]
+dev = ["hypothesis"]
+
 [[package]]
 name = "jsonpatch"
 version = "1.33"
 description = "Apply JSON-Patches (RFC 6902)"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
+files = [
+    {file = "jsonpatch-1.33-py2.py3-none-any.whl", hash = "sha256:0ae28c0cd062bbd8b8ecc26d7d164fbbea9652a1a3693f3b956c1eae5145dade"},
+    {file = "jsonpatch-1.33.tar.gz", hash = "sha256:9fcd4009c41e6d12348b4a0ff2563ba56a2923a7dfee731d004e212e1ee5030c"},
+]
 
 [package.dependencies]
 jsonpointer = ">=1.9"
@@ -1015,17 +1560,23 @@ jsonpointer = ">=1.9"
 name = "jsonpointer"
 version = "2.4"
 description = "Identify specific nodes in a JSON document (RFC 6901)"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, !=3.6.*"
+files = [
+    {file = "jsonpointer-2.4-py2.py3-none-any.whl", hash = "sha256:15d51bba20eea3165644553647711d150376234112651b4f1811022aecad7d7a"},
+    {file = "jsonpointer-2.4.tar.gz", hash = "sha256:585cee82b70211fa9e6043b7bb89db6e1aa49524340dde8ad6b63206ea689d88"},
+]
 
 [[package]]
 name = "jsonschema"
-version = "4.18.3"
+version = "4.19.2"
 description = "An implementation of JSON Schema validation for Python"
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "jsonschema-4.19.2-py3-none-any.whl", hash = "sha256:eee9e502c788e89cb166d4d37f43084e3b64ab405c795c03d343a4dbc2c810fc"},
+    {file = "jsonschema-4.19.2.tar.gz", hash = "sha256:c9ff4d7447eed9592c23a12ccee508baf0dd0d59650615e847feb6cdca74f392"},
+]
 
 [package.dependencies]
 attrs = ">=22.2.0"
@@ -1047,26 +1598,32 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-
 
 [[package]]
 name = "jsonschema-specifications"
-version = "2023.6.1"
+version = "2023.7.1"
 description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "jsonschema_specifications-2023.7.1-py3-none-any.whl", hash = "sha256:05adf340b659828a004220a9613be00fa3f223f2b82002e273dee62fd50524b1"},
+    {file = "jsonschema_specifications-2023.7.1.tar.gz", hash = "sha256:c91a50404e88a1f6ba40636778e2ee08f6e24c5613fe4c53ac24578a5a7f72bb"},
+]
 
 [package.dependencies]
 referencing = ">=0.28.0"
 
 [[package]]
 name = "jupyter-client"
-version = "8.3.0"
+version = "8.5.0"
 description = "Jupyter protocol implementation and client libraries"
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "jupyter_client-8.5.0-py3-none-any.whl", hash = "sha256:c3877aac7257ec68d79b5c622ce986bd2a992ca42f6ddc9b4dd1da50e89f7028"},
+    {file = "jupyter_client-8.5.0.tar.gz", hash = "sha256:e8754066510ce456358df363f97eae64b50860f30dc1fe8c6771440db3be9a63"},
+]
 
 [package.dependencies]
 importlib-metadata = {version = ">=4.8.3", markers = "python_version < \"3.10\""}
-jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
+jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
 python-dateutil = ">=2.8.2"
 pyzmq = ">=23.0"
 tornado = ">=6.2"
@@ -1078,11 +1635,14 @@ test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pyt
 
 [[package]]
 name = "jupyter-core"
-version = "5.3.1"
+version = "5.5.0"
 description = "Jupyter core package. A base package on which Jupyter projects rely."
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "jupyter_core-5.5.0-py3-none-any.whl", hash = "sha256:e11e02cd8ae0a9de5c6c44abf5727df9f2581055afe00b22183f621ba3585805"},
+    {file = "jupyter_core-5.5.0.tar.gz", hash = "sha256:880b86053bf298a8724994f95e99b99130659022a4f7f45f563084b6223861d3"},
+]
 
 [package.dependencies]
 platformdirs = ">=2.5"
@@ -1090,21 +1650,25 @@ pywin32 = {version = ">=300", markers = "sys_platform == \"win32\" and platform_
 traitlets = ">=5.3"
 
 [package.extras]
-docs = ["myst-parser", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling", "traitlets"]
+docs = ["myst-parser", "pydata-sphinx-theme", "sphinx-autodoc-typehints", "sphinxcontrib-github-alt", "sphinxcontrib-spelling", "traitlets"]
 test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"]
 
 [[package]]
 name = "jupyter-events"
-version = "0.6.3"
+version = "0.8.0"
 description = "Jupyter Event System library"
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "jupyter_events-0.8.0-py3-none-any.whl", hash = "sha256:81f07375c7673ff298bfb9302b4a981864ec64edaed75ca0fe6f850b9b045525"},
+    {file = "jupyter_events-0.8.0.tar.gz", hash = "sha256:fda08f0defce5e16930542ce60634ba48e010830d50073c3dfd235759cee77bf"},
+]
 
 [package.dependencies]
-jsonschema = {version = ">=3.2.0", extras = ["format-nongpl"]}
+jsonschema = {version = ">=4.18.0", extras = ["format-nongpl"]}
 python-json-logger = ">=2.0.4"
 pyyaml = ">=5.3"
+referencing = "*"
 rfc3339-validator = "*"
 rfc3986-validator = ">=0.1.1"
 traitlets = ">=5.3"
@@ -1112,22 +1676,40 @@ traitlets = ">=5.3"
 [package.extras]
 cli = ["click", "rich"]
 docs = ["jupyterlite-sphinx", "myst-parser", "pydata-sphinx-theme", "sphinxcontrib-spelling"]
-test = ["click", "coverage", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.19.0)", "pytest-console-scripts", "pytest-cov", "rich"]
+test = ["click", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.19.0)", "pytest-console-scripts", "rich"]
+
+[[package]]
+name = "jupyter-lsp"
+version = "2.2.0"
+description = "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab server"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "jupyter-lsp-2.2.0.tar.gz", hash = "sha256:8ebbcb533adb41e5d635eb8fe82956b0aafbf0fd443b6c4bfa906edeeb8635a1"},
+    {file = "jupyter_lsp-2.2.0-py3-none-any.whl", hash = "sha256:9e06b8b4f7dd50300b70dd1a78c0c3b0c3d8fa68e0f2d8a5d1fbab62072aca3f"},
+]
+
+[package.dependencies]
+importlib-metadata = {version = ">=4.8.3", markers = "python_version < \"3.10\""}
+jupyter-server = ">=1.1.2"
 
 [[package]]
 name = "jupyter-server"
-version = "2.7.0"
+version = "2.9.1"
 description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "jupyter_server-2.9.1-py3-none-any.whl", hash = "sha256:21ad1a3d455d5a79ce4bef5201925cd17510c17898cf9d54e3ccfb6b12734948"},
+    {file = "jupyter_server-2.9.1.tar.gz", hash = "sha256:9ba71be4b9c16e479e4c50c929f8ac4b1015baf90237a08681397a98c76c7e5e"},
+]
 
 [package.dependencies]
 anyio = ">=3.1.0"
 argon2-cffi = "*"
 jinja2 = "*"
 jupyter-client = ">=7.4.4"
-jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
+jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
 jupyter-events = ">=0.6.0"
 jupyter-server-terminals = "*"
 nbconvert = ">=6.4.4"
@@ -1137,7 +1719,7 @@ packaging = "*"
 prometheus-client = "*"
 pywinpty = {version = "*", markers = "os_name == \"nt\""}
 pyzmq = ">=24"
-send2trash = "*"
+send2trash = ">=1.8.2"
 terminado = ">=0.8.3"
 tornado = ">=6.2.0"
 traitlets = ">=5.6.0"
@@ -1151,9 +1733,12 @@ test = ["flaky", "ipykernel", "pre-commit", "pytest (>=7.0)", "pytest-console-sc
 name = "jupyter-server-terminals"
 version = "0.4.4"
 description = "A Jupyter Server Extension Providing Terminals."
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "jupyter_server_terminals-0.4.4-py3-none-any.whl", hash = "sha256:75779164661cec02a8758a5311e18bb8eb70c4e86c6b699403100f1585a12a36"},
+    {file = "jupyter_server_terminals-0.4.4.tar.gz", hash = "sha256:57ab779797c25a7ba68e97bcfb5d7740f2b5e8a83b5e8102b10438041a7eac5d"},
+]
 
 [package.dependencies]
 pywinpty = {version = ">=2.0.3", markers = "os_name == \"nt\""}
@@ -1164,28 +1749,95 @@ docs = ["jinja2", "jupyter-server", "mistune (<3.0)", "myst-parser", "nbformat",
 test = ["coverage", "jupyter-server (>=2.0.0)", "pytest (>=7.0)", "pytest-cov", "pytest-jupyter[server] (>=0.5.3)", "pytest-timeout"]
 
 [[package]]
-name = "jupyterlab-pygments"
-version = "0.2.2"
-description = "Pygments theme using JupyterLab CSS variables"
-category = "main"
+name = "jupyterlab"
+version = "4.0.7"
+description = "JupyterLab computational environment"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "jupyterlab-4.0.7-py3-none-any.whl", hash = "sha256:08683045117cc495531fdb39c22ababb9aaac6977a45e67cfad20046564c9c7c"},
+    {file = "jupyterlab-4.0.7.tar.gz", hash = "sha256:48792efd9f962b2bcda1f87d72168ff122c288b1d97d32109e4a11b33dc862be"},
+]
+
+[package.dependencies]
+async-lru = ">=1.0.0"
+importlib-metadata = {version = ">=4.8.3", markers = "python_version < \"3.10\""}
+ipykernel = "*"
+jinja2 = ">=3.0.3"
+jupyter-core = "*"
+jupyter-lsp = ">=2.0.0"
+jupyter-server = ">=2.4.0,<3"
+jupyterlab-server = ">=2.19.0,<3"
+notebook-shim = ">=0.2"
+packaging = "*"
+tomli = {version = "*", markers = "python_version < \"3.11\""}
+tornado = ">=6.2.0"
+traitlets = "*"
+
+[package.extras]
+dev = ["black[jupyter] (==23.7.0)", "build", "bump2version", "coverage", "hatch", "pre-commit", "pytest-cov", "ruff (==0.0.286)"]
+docs = ["jsx-lexer", "myst-parser", "pydata-sphinx-theme (>=0.13.0)", "pytest", "pytest-check-links", "pytest-tornasync", "sphinx (>=1.8,<7.2.0)", "sphinx-copybutton"]
+docs-screenshots = ["altair (==5.0.1)", "ipython (==8.14.0)", "ipywidgets (==8.0.6)", "jupyterlab-geojson (==3.4.0)", "jupyterlab-language-pack-zh-cn (==4.0.post0)", "matplotlib (==3.7.1)", "nbconvert (>=7.0.0)", "pandas (==2.0.2)", "scipy (==1.10.1)", "vega-datasets (==0.9.0)"]
+test = ["coverage", "pytest (>=7.0)", "pytest-check-links (>=0.7)", "pytest-console-scripts", "pytest-cov", "pytest-jupyter (>=0.5.3)", "pytest-timeout", "pytest-tornasync", "requests", "requests-cache", "virtualenv"]
+
+[[package]]
+name = "jupyterlab-pygments"
+version = "0.2.2"
+description = "Pygments theme using JupyterLab CSS variables"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "jupyterlab_pygments-0.2.2-py2.py3-none-any.whl", hash = "sha256:2405800db07c9f770863bcf8049a529c3dd4d3e28536638bd7c1c01d2748309f"},
+    {file = "jupyterlab_pygments-0.2.2.tar.gz", hash = "sha256:7405d7fde60819d905a9fa8ce89e4cd830e318cdad22a0030f7a901da705585d"},
+]
+
+[[package]]
+name = "jupyterlab-server"
+version = "2.25.0"
+description = "A set of server components for JupyterLab and JupyterLab like applications."
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 version = "23.4.1"
 description = "Store and access your passwords safely."
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 importlib-metadata = ">=3.6"
@@ -1201,9 +1853,12 @@ testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)",
 name = "keyrings-alt"
 version = "3.1"
 description = "Alternate keyring implementations"
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+]
 
 [[package]]
 name = "marshmallow"
-version = "3.19.0"
+version = "3.20.1"
 description = "A lightweight library for converting complex datatypes to and from native Python datatypes."
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
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+]
 
 [package.dependencies]
 packaging = ">=17.0"
 
 [package.extras]
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-lint = ["flake8 (==5.0.4)", "flake8-bugbear (==22.10.25)", "mypy (==0.990)", "pre-commit (>=2.4,<3.0)"]
+dev = ["flake8 (==6.0.0)", "flake8-bugbear (==23.7.10)", "mypy (==1.4.1)", "pre-commit (>=2.4,<4.0)", "pytest", "pytz", "simplejson", "tox"]
+docs = ["alabaster (==0.7.13)", "autodocsumm (==0.2.11)", "sphinx (==7.0.1)", "sphinx-issues (==3.0.1)", "sphinx-version-warning (==1.1.2)"]
+lint = ["flake8 (==6.0.0)", "flake8-bugbear (==23.7.10)", "mypy (==1.4.1)", "pre-commit (>=2.4,<4.0)"]
 tests = ["pytest", "pytz", "simplejson"]
 
 [[package]]
 name = "matplotlib-inline"
 version = "0.1.6"
 description = "Inline Matplotlib backend for Jupyter"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "matplotlib-inline-0.1.6.tar.gz", hash = "sha256:f887e5f10ba98e8d2b150ddcf4702c1e5f8b3a20005eb0f74bfdbd360ee6f304"},
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+]
 
 [package.dependencies]
 traitlets = "*"
@@ -1268,25 +2010,59 @@ traitlets = "*"
 name = "mccabe"
 version = "0.7.0"
 description = "McCabe checker, plugin for flake8"
-category = "dev"
 optional = false
 python-versions = ">=3.6"
+files = [
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+]
 
 [[package]]
 name = "mistune"
-version = "3.0.1"
+version = "3.0.2"
 description = "A sane and fast Markdown parser with useful plugins and renderers"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "mistune-3.0.2-py3-none-any.whl", hash = "sha256:71481854c30fdbc938963d3605b72501f5c10a9320ecd412c121c163a1c7d205"},
+    {file = "mistune-3.0.2.tar.gz", hash = "sha256:fc7f93ded930c92394ef2cb6f04a8aabab4117a91449e72dcc8dfa646a508be8"},
+]
 
 [[package]]
 name = "mypy"
-version = "1.4.1"
+version = "1.6.1"
 description = "Optional static typing for Python"
-category = "dev"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
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+    {file = "mypy-1.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:925cd6a3b7b55dfba252b7c4561892311c5358c6b5a601847015a1ad4eb7d332"},
+    {file = "mypy-1.6.1-cp39-cp39-musllinux_1_1_x86_64.whl", hash = "sha256:8f57e6b6927a49550da3d122f0cb983d400f843a8a82e65b3b380d3d7259468f"},
+    {file = "mypy-1.6.1-cp39-cp39-win_amd64.whl", hash = "sha256:a43ef1c8ddfdb9575691720b6352761f3f53d85f1b57d7745701041053deff30"},
+    {file = "mypy-1.6.1-py3-none-any.whl", hash = "sha256:4cbe68ef919c28ea561165206a2dcb68591c50f3bcf777932323bc208d949cf1"},
+    {file = "mypy-1.6.1.tar.gz", hash = "sha256:4d01c00d09a0be62a4ca3f933e315455bde83f37f892ba4b08ce92f3cf44bcc1"},
+]
 
 [package.dependencies]
 mypy-extensions = ">=1.0.0"
@@ -1296,60 +2072,33 @@ typing-extensions = ">=4.1.0"
 [package.extras]
 dmypy = ["psutil (>=4.0)"]
 install-types = ["pip"]
-python2 = ["typed-ast (>=1.4.0,<2)"]
 reports = ["lxml"]
 
 [[package]]
 name = "mypy-extensions"
 version = "1.0.0"
 description = "Type system extensions for programs checked with the mypy type checker."
-category = "dev"
 optional = false
 python-versions = ">=3.5"
-
-[[package]]
-name = "nbclassic"
-version = "1.0.0"
-description = "Jupyter Notebook as a Jupyter Server extension."
-category = "main"
-optional = false
-python-versions = ">=3.7"
-
-[package.dependencies]
-argon2-cffi = "*"
-ipykernel = "*"
-ipython-genutils = "*"
-jinja2 = "*"
-jupyter-client = ">=6.1.1"
-jupyter-core = ">=4.6.1"
-jupyter-server = ">=1.8"
-nbconvert = ">=5"
-nbformat = "*"
-nest-asyncio = ">=1.5"
-notebook-shim = ">=0.2.3"
-prometheus-client = "*"
-pyzmq = ">=17"
-Send2Trash = ">=1.8.0"
-terminado = ">=0.8.3"
-tornado = ">=6.1"
-traitlets = ">=4.2.1"
-
-[package.extras]
-docs = ["myst-parser", "nbsphinx", "sphinx", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
-json-logging = ["json-logging"]
-test = ["coverage", "nbval", "pytest", "pytest-cov", "pytest-jupyter", "pytest-playwright", "pytest-tornasync", "requests", "requests-unixsocket", "testpath"]
+files = [
+    {file = "mypy_extensions-1.0.0-py3-none-any.whl", hash = "sha256:4392f6c0eb8a5668a69e23d168ffa70f0be9ccfd32b5cc2d26a34ae5b844552d"},
+    {file = "mypy_extensions-1.0.0.tar.gz", hash = "sha256:75dbf8955dc00442a438fc4d0666508a9a97b6bd41aa2f0ffe9d2f2725af0782"},
+]
 
 [[package]]
 name = "nbclient"
 version = "0.8.0"
 description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor."
-category = "main"
 optional = false
 python-versions = ">=3.8.0"
+files = [
+    {file = "nbclient-0.8.0-py3-none-any.whl", hash = "sha256:25e861299e5303a0477568557c4045eccc7a34c17fc08e7959558707b9ebe548"},
+    {file = "nbclient-0.8.0.tar.gz", hash = "sha256:f9b179cd4b2d7bca965f900a2ebf0db4a12ebff2f36a711cb66861e4ae158e55"},
+]
 
 [package.dependencies]
 jupyter-client = ">=6.1.12"
-jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
+jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
 nbformat = ">=5.1"
 traitlets = ">=5.4"
 
@@ -1360,11 +2109,14 @@ test = ["flaky", "ipykernel (>=6.19.3)", "ipython", "ipywidgets", "nbconvert (>=
 
 [[package]]
 name = "nbconvert"
-version = "7.6.0"
+version = "7.10.0"
 description = "Converting Jupyter Notebooks"
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "nbconvert-7.10.0-py3-none-any.whl", hash = "sha256:8cf1d95e569730f136feb85e4bba25bdcf3a63fefb122d854ddff6771c0ac933"},
+    {file = "nbconvert-7.10.0.tar.gz", hash = "sha256:4bedff08848626be544de193b7594d98a048073f392178008ff4f171f5e21d26"},
+]
 
 [package.dependencies]
 beautifulsoup4 = "*"
@@ -1390,16 +2142,19 @@ docs = ["ipykernel", "ipython", "myst-parser", "nbsphinx (>=0.2.12)", "pydata-sp
 qtpdf = ["nbconvert[qtpng]"]
 qtpng = ["pyqtwebengine (>=5.15)"]
 serve = ["tornado (>=6.1)"]
-test = ["ipykernel", "ipywidgets (>=7)", "pre-commit", "pytest", "pytest-dependency"]
-webpdf = ["pyppeteer (>=1,<1.1)"]
+test = ["flaky", "ipykernel", "ipywidgets (>=7)", "pytest", "pytest-dependency"]
+webpdf = ["playwright"]
 
 [[package]]
 name = "nbformat"
-version = "5.9.1"
+version = "5.9.2"
 description = "The Jupyter Notebook format"
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "nbformat-5.9.2-py3-none-any.whl", hash = "sha256:1c5172d786a41b82bcfd0c23f9e6b6f072e8fb49c39250219e4acfff1efe89e9"},
+    {file = "nbformat-5.9.2.tar.gz", hash = "sha256:5f98b5ba1997dff175e77e0c17d5c10a96eaed2cbd1de3533d1fc35d5e111192"},
+]
 
 [package.dependencies]
 fastjsonschema = "*"
@@ -1413,19 +2168,25 @@ test = ["pep440", "pre-commit", "pytest", "testpath"]
 
 [[package]]
 name = "nest-asyncio"
-version = "1.5.6"
+version = "1.5.8"
 description = "Patch asyncio to allow nested event loops"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "nest_asyncio-1.5.8-py3-none-any.whl", hash = "sha256:accda7a339a70599cb08f9dd09a67e0c2ef8d8d6f4c07f96ab203f2ae254e48d"},
+    {file = "nest_asyncio-1.5.8.tar.gz", hash = "sha256:25aa2ca0d2a5b5531956b9e273b45cf664cae2b145101d73b86b199978d48fdb"},
+]
 
 [[package]]
 name = "networkx"
 version = "2.8.8"
 description = "Python package for creating and manipulating graphs and networks"
-category = "main"
 optional = false
 python-versions = ">=3.8"
+files = [
+    {file = "networkx-2.8.8-py3-none-any.whl", hash = "sha256:e435dfa75b1d7195c7b8378c3859f0445cd88c6b0375c181ed66823a9ceb7524"},
+    {file = "networkx-2.8.8.tar.gz", hash = "sha256:230d388117af870fce5647a3c52401fcf753e94720e6ea6b4197a5355648885e"},
+]
 
 [package.extras]
 default = ["matplotlib (>=3.4)", "numpy (>=1.19)", "pandas (>=1.3)", "scipy (>=1.8)"]
@@ -1436,42 +2197,37 @@ test = ["codecov (>=2.1)", "pytest (>=7.2)", "pytest-cov (>=4.0)"]
 
 [[package]]
 name = "notebook"
-version = "6.5.4"
-description = "A web-based notebook environment for interactive computing"
-category = "main"
+version = "7.0.6"
+description = "Jupyter Notebook - A web-based notebook environment for interactive computing"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "notebook-7.0.6-py3-none-any.whl", hash = "sha256:0fe8f67102fea3744fedf652e4c15339390902ca70c5a31c4f547fa23da697cc"},
+    {file = "notebook-7.0.6.tar.gz", hash = "sha256:ec6113b06529019f7f287819af06c97a2baf7a95ac21a8f6e32192898e9f9a58"},
+]
 
 [package.dependencies]
-argon2-cffi = "*"
-ipykernel = "*"
-ipython-genutils = "*"
-jinja2 = "*"
-jupyter-client = ">=5.3.4"
-jupyter-core = ">=4.6.1"
-nbclassic = ">=0.4.7"
-nbconvert = ">=5"
-nbformat = "*"
-nest-asyncio = ">=1.5"
-prometheus-client = "*"
-pyzmq = ">=17"
-Send2Trash = ">=1.8.0"
-terminado = ">=0.8.3"
-tornado = ">=6.1"
-traitlets = ">=4.2.1"
+jupyter-server = ">=2.4.0,<3"
+jupyterlab = ">=4.0.2,<5"
+jupyterlab-server = ">=2.22.1,<3"
+notebook-shim = ">=0.2,<0.3"
+tornado = ">=6.2.0"
 
 [package.extras]
-docs = ["myst-parser", "nbsphinx", "sphinx", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
-json-logging = ["json-logging"]
-test = ["coverage", "nbval", "pytest", "pytest-cov", "requests", "requests-unixsocket", "selenium (==4.1.5)", "testpath"]
+dev = ["hatch", "pre-commit"]
+docs = ["myst-parser", "nbsphinx", "pydata-sphinx-theme", "sphinx (>=1.3.6)", "sphinxcontrib-github-alt", "sphinxcontrib-spelling"]
+test = ["importlib-resources (>=5.0)", "ipykernel", "jupyter-server[test] (>=2.4.0,<3)", "jupyterlab-server[test] (>=2.22.1,<3)", "nbval", "pytest (>=7.0)", "pytest-console-scripts", "pytest-timeout", "pytest-tornasync", "requests"]
 
 [[package]]
 name = "notebook-shim"
 version = "0.2.3"
 description = "A shim layer for notebook traits and config"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "notebook_shim-0.2.3-py3-none-any.whl", hash = "sha256:a83496a43341c1674b093bfcebf0fe8e74cbe7eda5fd2bbc56f8e39e1486c0c7"},
+    {file = "notebook_shim-0.2.3.tar.gz", hash = "sha256:f69388ac283ae008cd506dda10d0288b09a017d822d5e8c7129a152cbd3ce7e9"},
+]
 
 [package.dependencies]
 jupyter-server = ">=1.8,<3"
@@ -1481,19 +2237,55 @@ test = ["pytest", "pytest-console-scripts", "pytest-jupyter", "pytest-tornasync"
 
 [[package]]
 name = "numpy"
-version = "1.25.1"
+version = "1.26.1"
 description = "Fundamental package for array computing in Python"
-category = "main"
 optional = false
-python-versions = ">=3.9"
+python-versions = "<3.13,>=3.9"
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 version = "4.1.3"
 description = "OAuth 2.0 client library"
-category = "main"
 optional = false
 python-versions = "*"
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 [package.dependencies]
 httplib2 = ">=0.9.1"
@@ -1506,9 +2298,12 @@ six = ">=1.6.1"
 name = "oauthlib"
 version = "3.2.2"
 description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic"
-category = "main"
 optional = false
 python-versions = ">=3.6"
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 [package.extras]
 rsa = ["cryptography (>=3.0.0)"]
@@ -1519,36 +2314,47 @@ signedtoken = ["cryptography (>=3.0.0)", "pyjwt (>=2.0.0,<3)"]
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 version = "3.1.2"
 description = "A Python library to read/write Excel 2010 xlsx/xlsm files"
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 [package.dependencies]
 et-xmlfile = "*"
 
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-category = "main"
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 python-versions = ">=3.7"
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 version = "1.6.5"
 description = "An easy to use library to speed up computation (by parallelizing on multi CPUs) with pandas."
-category = "main"
 optional = false
 python-versions = ">=3.7"
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 [package.dependencies]
 dill = ">=0.3.1"
@@ -1563,9 +2369,37 @@ doc = ["mkdocs-material"]
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 version = "1.5.3"
 description = "Powerful data structures for data analysis, time series, and statistics"
-category = "main"
 optional = false
 python-versions = ">=3.8"
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 [package.dependencies]
 numpy = [
@@ -1582,17 +2416,23 @@ test = ["hypothesis (>=5.5.3)", "pytest (>=6.0)", "pytest-xdist (>=1.31)"]
 name = "pandocfilters"
 version = "1.5.0"
 description = "Utilities for writing pandoc filters in python"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
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+]
 
 [[package]]
 name = "parso"
 version = "0.8.3"
 description = "A Python Parser"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
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+]
 
 [package.extras]
 qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
@@ -1600,19 +2440,25 @@ testing = ["docopt", "pytest (<6.0.0)"]
 
 [[package]]
 name = "pathspec"
-version = "0.11.1"
+version = "0.11.2"
 description = "Utility library for gitignore style pattern matching of file paths."
-category = "dev"
 optional = false
 python-versions = ">=3.7"
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 [[package]]
 name = "pdoc"
 version = "12.3.1"
 description = "API Documentation for Python Projects"
-category = "main"
 optional = false
 python-versions = ">=3.7"
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 [package.dependencies]
 Jinja2 = ">=2.11.0"
@@ -1626,40 +2472,41 @@ dev = ["black", "hypothesis", "mypy", "pytest", "pytest-cov", "pytest-timeout",
 name = "pexpect"
 version = "4.8.0"
 description = "Pexpect allows easy control of interactive console applications."
-category = "main"
 optional = false
 python-versions = "*"
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 [package.dependencies]
 ptyprocess = ">=0.5"
 
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-version = "0.7.5"
-description = "Tiny 'shelve'-like database with concurrency support"
-category = "main"
-optional = false
-python-versions = "*"
-
 [[package]]
 name = "platformdirs"
-version = "3.8.1"
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 description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-category = "main"
 optional = false
 python-versions = ">=3.7"
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-test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.3.1)", "pytest-cov (>=4.1)", "pytest-mock (>=3.10)"]
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 [[package]]
 name = "pluggy"
-version = "1.2.0"
+version = "1.3.0"
 description = "plugin and hook calling mechanisms for python"
-category = "dev"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
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+]
 
 [package.extras]
 dev = ["pre-commit", "tox"]
@@ -1667,11 +2514,14 @@ testing = ["pytest", "pytest-benchmark"]
 
 [[package]]
 name = "prometheus-client"
-version = "0.17.1"
+version = "0.18.0"
 description = "Python client for the Prometheus monitoring system."
-category = "main"
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-python-versions = ">=3.6"
+python-versions = ">=3.8"
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@@ -1680,28 +2530,62 @@ twisted = ["twisted"]
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 version = "3.0.39"
 description = "Library for building powerful interactive command lines in Python"
-category = "main"
 optional = false
 python-versions = ">=3.7.0"
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 [package.dependencies]
 wcwidth = "*"
 
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-category = "main"
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 [package.extras]
 test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
@@ -1710,17 +2594,23 @@ test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
 name = "ptyprocess"
 version = "0.7.0"
 description = "Run a subprocess in a pseudo terminal"
-category = "main"
 optional = false
 python-versions = "*"
-
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+
 [[package]]
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 version = "0.2.2"
 description = "Safely evaluate AST nodes without side effects"
-category = "main"
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 python-versions = "*"
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+]
 
 [package.extras]
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@@ -1729,52 +2619,104 @@ tests = ["pytest"]
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-category = "main"
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 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
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 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
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 [package.dependencies]
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+    {file = "pydantic-1.10.13.tar.gz", hash = "sha256:32c8b48dcd3b2ac4e78b0ba4af3a2c2eb6048cb75202f0ea7b34feb740efc340"},
+]
 
 [package.dependencies]
 typing-extensions = ">=4.2.0"
@@ -1785,19 +2727,25 @@ email = ["email-validator (>=1.0.3)"]
 
 [[package]]
 name = "pyflakes"
-version = "3.0.1"
+version = "3.1.0"
 description = "passive checker of Python programs"
-category = "dev"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
+files = [
+    {file = "pyflakes-3.1.0-py2.py3-none-any.whl", hash = "sha256:4132f6d49cb4dae6819e5379898f2b8cce3c5f23994194c24b77d5da2e36f774"},
+    {file = "pyflakes-3.1.0.tar.gz", hash = "sha256:a0aae034c444db0071aa077972ba4768d40c830d9539fd45bf4cd3f8f6992efc"},
+]
 
 [[package]]
 name = "pygments"
-version = "2.15.1"
+version = "2.16.1"
 description = "Pygments is a syntax highlighting package written in Python."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
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+    {file = "Pygments-2.16.1.tar.gz", hash = "sha256:1daff0494820c69bc8941e407aa20f577374ee88364ee10a98fdbe0aece96e29"},
+]
 
 [package.extras]
 plugins = ["importlib-metadata"]
@@ -1806,9 +2754,12 @@ plugins = ["importlib-metadata"]
 name = "pygsheets"
 version = "2.0.6"
 description = "Google Spreadsheets Python API v4"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
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+    {file = "pygsheets-2.0.6.tar.gz", hash = "sha256:bff46c812e99f9b8b81a09b456581365281c797620ec08530b0d0e48fa9299e2"},
+]
 
 [package.dependencies]
 google-api-python-client = ">=2.50.0"
@@ -1819,14 +2770,17 @@ pandas = ["pandas (>=0.14.0)"]
 
 [[package]]
 name = "pylint"
-version = "2.17.4"
+version = "2.17.7"
 description = "python code static checker"
-category = "dev"
 optional = false
 python-versions = ">=3.7.2"
+files = [
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+    {file = "pylint-2.17.7.tar.gz", hash = "sha256:f4fcac7ae74cfe36bc8451e931d8438e4a476c20314b1101c458ad0f05191fad"},
+]
 
 [package.dependencies]
-astroid = ">=2.15.4,<=2.17.0-dev0"
+astroid = ">=2.15.8,<=2.17.0-dev0"
 colorama = {version = ">=0.4.5", markers = "sys_platform == \"win32\""}
 dill = {version = ">=0.2", markers = "python_version < \"3.11\""}
 isort = ">=4.2.5,<6"
@@ -1842,37 +2796,46 @@ testutils = ["gitpython (>3)"]
 
 [[package]]
 name = "pyopenssl"
-version = "23.2.0"
+version = "23.3.0"
 description = "Python wrapper module around the OpenSSL library"
-category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
+files = [
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+]
 
 [package.dependencies]
-cryptography = ">=38.0.0,<40.0.0 || >40.0.0,<40.0.1 || >40.0.1,<42"
+cryptography = ">=41.0.5,<42"
 
 [package.extras]
-docs = ["sphinx (!=5.2.0,!=5.2.0.post0)", "sphinx-rtd-theme"]
+docs = ["sphinx (!=5.2.0,!=5.2.0.post0,!=7.2.5)", "sphinx-rtd-theme"]
 test = ["flaky", "pretend", "pytest (>=3.0.1)"]
 
 [[package]]
 name = "pyparsing"
-version = "3.1.0"
+version = "3.1.1"
 description = "pyparsing module - Classes and methods to define and execute parsing grammars"
-category = "main"
 optional = false
 python-versions = ">=3.6.8"
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+]
 
 [package.extras]
 diagrams = ["jinja2", "railroad-diagrams"]
 
 [[package]]
 name = "pytest"
-version = "7.4.0"
+version = "7.4.3"
 description = "pytest: simple powerful testing with Python"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
+files = [
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+]
 
 [package.dependencies]
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
@@ -1889,9 +2852,12 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no
 name = "pytest-cov"
 version = "4.1.0"
 description = "Pytest plugin for measuring coverage."
-category = "dev"
 optional = false
 python-versions = ">=3.7"
+files = [
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+]
 
 [package.dependencies]
 coverage = {version = ">=5.2.1", extras = ["toml"]}
@@ -1902,11 +2868,14 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale
 
 [[package]]
 name = "pytest-mock"
-version = "3.11.1"
+version = "3.12.0"
 description = "Thin-wrapper around the mock package for easier use with pytest"
-category = "dev"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
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+]
 
 [package.dependencies]
 pytest = ">=5.0"
@@ -1918,9 +2887,12 @@ dev = ["pre-commit", "pytest-asyncio", "tox"]
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 version = "2.8.2"
 description = "Extensions to the standard Python datetime module"
-category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
+files = [
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+]
 
 [package.dependencies]
 six = ">=1.5"
@@ -1929,9 +2901,12 @@ six = ">=1.5"
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 version = "0.21.1"
 description = "Read key-value pairs from a .env file and set them as environment variables"
-category = "dev"
 optional = false
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+]
 
 [package.extras]
 cli = ["click (>=5.0)"]
@@ -1940,57 +2915,233 @@ cli = ["click (>=5.0)"]
 name = "python-json-logger"
 version = "2.0.7"
 description = "A python library adding a json log formatter"
-category = "main"
 optional = false
 python-versions = ">=3.6"
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+version = "2023.3.post1"
 description = "World timezone definitions, modern and historical"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
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 cffi = {version = "*", markers = "implementation_name == \"pypy\""}
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 version = "2.31.0"
 description = "Python HTTP for Humans."
-category = "main"
 optional = false
 python-versions = ">=3.7"
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 [package.dependencies]
 certifi = ">=2017.4.17"
@@ -2055,9 +3304,12 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 name = "requests-oauthlib"
 version = "1.3.1"
 description = "OAuthlib authentication support for Requests."
-category = "main"
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 oauthlib = ">=3.0.0"
@@ -2070,9 +3322,12 @@ rsa = ["oauthlib[signedtoken] (>=3.0.0)"]
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 [package.dependencies]
 six = "*"
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-category = "main"
 optional = false
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+]
 
 [[package]]
 name = "schematic-db"
-version = "0.0.29"
+version = "0.0.dev33"
 description = ""
-category = "main"
 optional = false
 python-versions = ">=3.9,<4.0"
+files = [
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 deprecation = ">=2.1.0,<3.0.0"
 interrogate = ">=1.5.0,<2.0.0"
 networkx = ">=2.8.6,<3.0.0"
-pandas = ">=1.4.3,<2.0.0"
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 pydantic = ">=1.10.7,<2.0.0"
 PyYAML = ">=6.0,<7.0"
 requests = ">=2.28.1,<3.0.0"
-SQLAlchemy = ">=1.4.39,<2.0.0"
-SQLAlchemy-Utils = ">=0.38.3,<0.39.0"
-synapseclient = {version = ">=2.7.0,<3.0.0", optional = true, markers = "extra == \"synapse\""}
+SQLAlchemy = ">=2.0.19,<3.0.0"
+SQLAlchemy-Utils = ">=0.41.1,<0.42.0"
+synapseclient = {version = ">=3.0.0,<4.0.0", optional = true, markers = "extra == \"synapse\""}
 tenacity = ">=8.1.0,<9.0.0"
 validators = ">=0.20.0,<0.21.0"
 
 [package.extras]
 mysql = ["mysqlclient (>=2.1.1,<3.0.0)"]
 postgres = ["psycopg2-binary (>=2.9.5,<3.0.0)"]
-synapse = ["synapseclient (>=2.7.0,<3.0.0)"]
+synapse = ["synapseclient (>=3.0.0,<4.0.0)"]
 
 [[package]]
 name = "scipy"
-version = "1.11.1"
+version = "1.11.3"
 description = "Fundamental algorithms for scientific computing in Python"
-category = "main"
 optional = false
 python-versions = "<3.13,>=3.9"
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+    {file = "scipy-1.11.3-cp39-cp39-win_amd64.whl", hash = "sha256:4b4bb134c7aa457e26cc6ea482b016fef45db71417d55cc6d8f43d799cdf9ef2"},
+    {file = "scipy-1.11.3.tar.gz", hash = "sha256:bba4d955f54edd61899776bad459bf7326e14b9fa1c552181f0479cc60a568cd"},
+]
 
 [package.dependencies]
 numpy = ">=1.21.6,<1.28.0"
@@ -2174,9 +3618,12 @@ test = ["asv", "gmpy2", "mpmath", "pooch", "pytest", "pytest-cov", "pytest-timeo
 name = "secretstorage"
 version = "3.3.3"
 description = "Python bindings to FreeDesktop.org Secret Service API"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "SecretStorage-3.3.3-py3-none-any.whl", hash = "sha256:f356e6628222568e3af06f2eba8df495efa13b3b63081dafd4f7d9a7b7bc9f99"},
+    {file = "SecretStorage-3.3.3.tar.gz", hash = "sha256:2403533ef369eca6d2ba81718576c5e0f564d5cca1b58f73a8b23e7d4eeebd77"},
+]
 
 [package.dependencies]
 cryptography = ">=2.0"
@@ -2186,9 +3633,12 @@ jeepney = ">=0.6"
 name = "send2trash"
 version = "1.8.2"
 description = "Send file to trash natively under Mac OS X, Windows and Linux"
-category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
+files = [
+    {file = "Send2Trash-1.8.2-py3-none-any.whl", hash = "sha256:a384719d99c07ce1eefd6905d2decb6f8b7ed054025bb0e618919f945de4f679"},
+    {file = "Send2Trash-1.8.2.tar.gz", hash = "sha256:c132d59fa44b9ca2b1699af5c86f57ce9f4c5eb56629d5d55fbb7a35f84e2312"},
+]
 
 [package.extras]
 nativelib = ["pyobjc-framework-Cocoa", "pywin32"]
@@ -2199,9 +3649,12 @@ win32 = ["pywin32"]
 name = "setuptools"
 version = "66.1.1"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "setuptools-66.1.1-py3-none-any.whl", hash = "sha256:6f590d76b713d5de4e49fe4fbca24474469f53c83632d5d0fd056f7ff7e8112b"},
+    {file = "setuptools-66.1.1.tar.gz", hash = "sha256:ac4008d396bc9cd983ea483cb7139c0240a07bbc74ffb6232fceffedc6cf03a8"},
+]
 
 [package.extras]
 docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-hoverxref (<2)", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (==0.8.3)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
@@ -2212,41 +3665,56 @@ testing-integration = ["build[virtualenv]", "filelock (>=3.4.0)", "jaraco.envs (
 name = "six"
 version = "1.16.0"
 description = "Python 2 and 3 compatibility utilities"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
+files = [
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+    {file = "six-1.16.0.tar.gz", hash = "sha256:1e61c37477a1626458e36f7b1d82aa5c9b094fa4802892072e49de9c60c4c926"},
+]
 
 [[package]]
 name = "sniffio"
 version = "1.3.0"
 description = "Sniff out which async library your code is running under"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "sniffio-1.3.0-py3-none-any.whl", hash = "sha256:eecefdce1e5bbfb7ad2eeaabf7c1eeb404d7757c379bd1f7e5cce9d8bf425384"},
+    {file = "sniffio-1.3.0.tar.gz", hash = "sha256:e60305c5e5d314f5389259b7f22aaa33d8f7dee49763119234af3755c55b9101"},
+]
 
 [[package]]
 name = "snowballstemmer"
 version = "2.2.0"
 description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms."
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "snowballstemmer-2.2.0-py2.py3-none-any.whl", hash = "sha256:c8e1716e83cc398ae16824e5572ae04e0d9fc2c6b985fb0f900f5f0c96ecba1a"},
+    {file = "snowballstemmer-2.2.0.tar.gz", hash = "sha256:09b16deb8547d3412ad7b590689584cd0fe25ec8db3be37788be3810cbf19cb1"},
+]
 
 [[package]]
 name = "soupsieve"
-version = "2.4.1"
+version = "2.5"
 description = "A modern CSS selector implementation for Beautiful Soup."
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "soupsieve-2.5-py3-none-any.whl", hash = "sha256:eaa337ff55a1579b6549dc679565eac1e3d000563bcb1c8ab0d0fefbc0c2cdc7"},
+    {file = "soupsieve-2.5.tar.gz", hash = "sha256:5663d5a7b3bfaeee0bc4372e7fc48f9cff4940b3eec54a6451cc5299f1097690"},
+]
 
 [[package]]
 name = "sphinx"
-version = "7.0.1"
+version = "7.2.6"
 description = "Python documentation generator"
-category = "main"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+files = [
+    {file = "sphinx-7.2.6-py3-none-any.whl", hash = "sha256:1e09160a40b956dc623c910118fa636da93bd3ca0b9876a7b3df90f07d691560"},
+    {file = "sphinx-7.2.6.tar.gz", hash = "sha256:9a5160e1ea90688d5963ba09a2dcd8bdd526620edbb65c328728f1b2228d5ab5"},
+]
 
 [package.dependencies]
 alabaster = ">=0.7,<0.8"
@@ -2257,7 +3725,7 @@ imagesize = ">=1.3"
 importlib-metadata = {version = ">=4.8", markers = "python_version < \"3.10\""}
 Jinja2 = ">=3.0"
 packaging = ">=21.0"
-Pygments = ">=2.13"
+Pygments = ">=2.14"
 requests = ">=2.25.0"
 snowballstemmer = ">=2.0"
 sphinxcontrib-applehelp = "*"
@@ -2265,20 +3733,23 @@ sphinxcontrib-devhelp = "*"
 sphinxcontrib-htmlhelp = ">=2.0.0"
 sphinxcontrib-jsmath = "*"
 sphinxcontrib-qthelp = "*"
-sphinxcontrib-serializinghtml = ">=1.1.5"
+sphinxcontrib-serializinghtml = ">=1.1.9"
 
 [package.extras]
 docs = ["sphinxcontrib-websupport"]
 lint = ["docutils-stubs", "flake8 (>=3.5.0)", "flake8-simplify", "isort", "mypy (>=0.990)", "ruff", "sphinx-lint", "types-requests"]
-test = ["cython", "filelock", "html5lib", "pytest (>=4.6)"]
+test = ["cython (>=3.0)", "filelock", "html5lib", "pytest (>=4.6)", "setuptools (>=67.0)"]
 
 [[package]]
 name = "sphinx-click"
 version = "4.4.0"
 description = "Sphinx extension that automatically documents click applications"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "sphinx-click-4.4.0.tar.gz", hash = "sha256:cc67692bd28f482c7f01531c61b64e9d2f069bfcf3d24cbbb51d4a84a749fa48"},
+    {file = "sphinx_click-4.4.0-py3-none-any.whl", hash = "sha256:2821c10a68fc9ee6ce7c92fad26540d8d8c8f45e6d7258f0e4fb7529ae8fab49"},
+]
 
 [package.dependencies]
 click = ">=7.0"
@@ -2287,11 +3758,17 @@ sphinx = ">=2.0"
 
 [[package]]
 name = "sphinxcontrib-applehelp"
-version = "1.0.4"
+version = "1.0.7"
 description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple help books"
-category = "main"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+files = [
+    {file = "sphinxcontrib_applehelp-1.0.7-py3-none-any.whl", hash = "sha256:094c4d56209d1734e7d252f6e0b3ccc090bd52ee56807a5d9315b19c122ab15d"},
+    {file = "sphinxcontrib_applehelp-1.0.7.tar.gz", hash = "sha256:39fdc8d762d33b01a7d8f026a3b7d71563ea3b72787d5f00ad8465bd9d6dfbfa"},
+]
+
+[package.dependencies]
+Sphinx = ">=5"
 
 [package.extras]
 lint = ["docutils-stubs", "flake8", "mypy"]
@@ -2299,11 +3776,17 @@ test = ["pytest"]
 
 [[package]]
 name = "sphinxcontrib-devhelp"
-version = "1.0.2"
-description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp document."
-category = "main"
+version = "1.0.5"
+description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp documents"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.9"
+files = [
+    {file = "sphinxcontrib_devhelp-1.0.5-py3-none-any.whl", hash = "sha256:fe8009aed765188f08fcaadbb3ea0d90ce8ae2d76710b7e29ea7d047177dae2f"},
+    {file = "sphinxcontrib_devhelp-1.0.5.tar.gz", hash = "sha256:63b41e0d38207ca40ebbeabcf4d8e51f76c03e78cd61abe118cf4435c73d4212"},
+]
+
+[package.dependencies]
+Sphinx = ">=5"
 
 [package.extras]
 lint = ["docutils-stubs", "flake8", "mypy"]
@@ -2311,11 +3794,17 @@ test = ["pytest"]
 
 [[package]]
 name = "sphinxcontrib-htmlhelp"
-version = "2.0.1"
+version = "2.0.4"
 description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML help files"
-category = "main"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
+files = [
+    {file = "sphinxcontrib_htmlhelp-2.0.4-py3-none-any.whl", hash = "sha256:8001661c077a73c29beaf4a79968d0726103c5605e27db92b9ebed8bab1359e9"},
+    {file = "sphinxcontrib_htmlhelp-2.0.4.tar.gz", hash = "sha256:6c26a118a05b76000738429b724a0568dbde5b72391a688577da08f11891092a"},
+]
+
+[package.dependencies]
+Sphinx = ">=5"
 
 [package.extras]
 lint = ["docutils-stubs", "flake8", "mypy"]
@@ -2325,20 +3814,29 @@ test = ["html5lib", "pytest"]
 name = "sphinxcontrib-jsmath"
 version = "1.0.1"
 description = "A sphinx extension which renders display math in HTML via JavaScript"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "sphinxcontrib-jsmath-1.0.1.tar.gz", hash = "sha256:a9925e4a4587247ed2191a22df5f6970656cb8ca2bd6284309578f2153e0c4b8"},
+    {file = "sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl", hash = "sha256:2ec2eaebfb78f3f2078e73666b1415417a116cc848b72e5172e596c871103178"},
+]
 
 [package.extras]
 test = ["flake8", "mypy", "pytest"]
 
 [[package]]
 name = "sphinxcontrib-qthelp"
-version = "1.0.3"
-description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp document."
-category = "main"
+version = "1.0.6"
+description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp documents"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.9"
+files = [
+    {file = "sphinxcontrib_qthelp-1.0.6-py3-none-any.whl", hash = "sha256:bf76886ee7470b934e363da7a954ea2825650013d367728588732c7350f49ea4"},
+    {file = "sphinxcontrib_qthelp-1.0.6.tar.gz", hash = "sha256:62b9d1a186ab7f5ee3356d906f648cacb7a6bdb94d201ee7adf26db55092982d"},
+]
+
+[package.dependencies]
+Sphinx = ">=5"
 
 [package.extras]
 lint = ["docutils-stubs", "flake8", "mypy"]
@@ -2346,11 +3844,17 @@ test = ["pytest"]
 
 [[package]]
 name = "sphinxcontrib-serializinghtml"
-version = "1.1.5"
-description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)."
-category = "main"
+version = "1.1.9"
+description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.9"
+files = [
+    {file = "sphinxcontrib_serializinghtml-1.1.9-py3-none-any.whl", hash = "sha256:9b36e503703ff04f20e9675771df105e58aa029cfcbc23b8ed716019b7416ae1"},
+    {file = "sphinxcontrib_serializinghtml-1.1.9.tar.gz", hash = "sha256:0c64ff898339e1fac29abd2bf5f11078f3ec413cfe9c046d3120d7ca65530b54"},
+]
+
+[package.dependencies]
+Sphinx = ">=5"
 
 [package.extras]
 lint = ["docutils-stubs", "flake8", "mypy"]
@@ -2358,43 +3862,100 @@ test = ["pytest"]
 
 [[package]]
 name = "sqlalchemy"
-version = "1.4.49"
+version = "2.0.22"
 description = "Database Abstraction Library"
-category = "main"
 optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
+python-versions = ">=3.7"
+files = [
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+]
 
 [package.dependencies]
-greenlet = {version = "!=0.4.17", markers = "python_version >= \"3\" and (platform_machine == \"aarch64\" or platform_machine == \"ppc64le\" or platform_machine == \"x86_64\" or platform_machine == \"amd64\" or platform_machine == \"AMD64\" or platform_machine == \"win32\" or platform_machine == \"WIN32\")"}
+greenlet = {version = "!=0.4.17", markers = "platform_machine == \"aarch64\" or platform_machine == \"ppc64le\" or platform_machine == \"x86_64\" or platform_machine == \"amd64\" or platform_machine == \"AMD64\" or platform_machine == \"win32\" or platform_machine == \"WIN32\""}
+typing-extensions = ">=4.2.0"
 
 [package.extras]
-aiomysql = ["aiomysql", "greenlet (!=0.4.17)"]
-aiosqlite = ["aiosqlite", "greenlet (!=0.4.17)", "typing_extensions (!=3.10.0.1)"]
+aiomysql = ["aiomysql (>=0.2.0)", "greenlet (!=0.4.17)"]
+aiosqlite = ["aiosqlite", "greenlet (!=0.4.17)", "typing-extensions (!=3.10.0.1)"]
 asyncio = ["greenlet (!=0.4.17)"]
-asyncmy = ["asyncmy (>=0.2.3,!=0.2.4)", "greenlet (!=0.4.17)"]
-mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2)"]
+asyncmy = ["asyncmy (>=0.2.3,!=0.2.4,!=0.2.6)", "greenlet (!=0.4.17)"]
+mariadb-connector = ["mariadb (>=1.0.1,!=1.1.2,!=1.1.5)"]
 mssql = ["pyodbc"]
 mssql-pymssql = ["pymssql"]
 mssql-pyodbc = ["pyodbc"]
-mypy = ["mypy (>=0.910)", "sqlalchemy2-stubs"]
-mysql = ["mysqlclient (>=1.4.0)", "mysqlclient (>=1.4.0,<2)"]
+mypy = ["mypy (>=0.910)"]
+mysql = ["mysqlclient (>=1.4.0)"]
 mysql-connector = ["mysql-connector-python"]
-oracle = ["cx_oracle (>=7)", "cx_oracle (>=7,<8)"]
+oracle = ["cx-oracle (>=7)"]
+oracle-oracledb = ["oracledb (>=1.0.1)"]
 postgresql = ["psycopg2 (>=2.7)"]
 postgresql-asyncpg = ["asyncpg", "greenlet (!=0.4.17)"]
-postgresql-pg8000 = ["pg8000 (>=1.16.6,!=1.29.0)"]
+postgresql-pg8000 = ["pg8000 (>=1.29.1)"]
+postgresql-psycopg = ["psycopg (>=3.0.7)"]
 postgresql-psycopg2binary = ["psycopg2-binary"]
 postgresql-psycopg2cffi = ["psycopg2cffi"]
-pymysql = ["pymysql", "pymysql (<1)"]
-sqlcipher = ["sqlcipher3_binary"]
+postgresql-psycopgbinary = ["psycopg[binary] (>=3.0.7)"]
+pymysql = ["pymysql"]
+sqlcipher = ["sqlcipher3-binary"]
 
 [[package]]
 name = "sqlalchemy-utils"
-version = "0.38.3"
+version = "0.41.1"
 description = "Various utility functions for SQLAlchemy."
-category = "main"
 optional = false
-python-versions = "~=3.6"
+python-versions = ">=3.6"
+files = [
+    {file = "SQLAlchemy-Utils-0.41.1.tar.gz", hash = "sha256:a2181bff01eeb84479e38571d2c0718eb52042f9afd8c194d0d02877e84b7d74"},
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+]
 
 [package.dependencies]
 SQLAlchemy = ">=1.3"
@@ -2408,18 +3969,21 @@ intervals = ["intervals (>=0.7.1)"]
 password = ["passlib (>=1.6,<2.0)"]
 pendulum = ["pendulum (>=2.0.5)"]
 phone = ["phonenumbers (>=5.9.2)"]
-test = ["Jinja2 (>=2.3)", "Pygments (>=1.2)", "backports.zoneinfo", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "isort (>=4.2.2)", "pg8000 (>=1.12.4)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil (>=2.6)", "pytz (>=2014.2)"]
-test-all = ["Babel (>=1.3)", "Jinja2 (>=2.3)", "Pygments (>=1.2)", "arrow (>=0.3.4)", "backports.zoneinfo", "colour (>=0.0.4)", "cryptography (>=0.6)", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "furl (>=0.4.1)", "intervals (>=0.7.1)", "isort (>=4.2.2)", "passlib (>=1.6,<2.0)", "pendulum (>=2.0.5)", "pg8000 (>=1.12.4)", "phonenumbers (>=5.9.2)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil", "python-dateutil (>=2.6)", "pytz (>=2014.2)"]
+test = ["Jinja2 (>=2.3)", "Pygments (>=1.2)", "backports.zoneinfo", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "isort (>=4.2.2)", "pg8000 (>=1.12.4)", "psycopg (>=3.1.8)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil (>=2.6)", "pytz (>=2014.2)"]
+test-all = ["Babel (>=1.3)", "Jinja2 (>=2.3)", "Pygments (>=1.2)", "arrow (>=0.3.4)", "backports.zoneinfo", "colour (>=0.0.4)", "cryptography (>=0.6)", "docutils (>=0.10)", "flake8 (>=2.4.0)", "flexmock (>=0.9.7)", "furl (>=0.4.1)", "intervals (>=0.7.1)", "isort (>=4.2.2)", "passlib (>=1.6,<2.0)", "pendulum (>=2.0.5)", "pg8000 (>=1.12.4)", "phonenumbers (>=5.9.2)", "psycopg (>=3.1.8)", "psycopg2 (>=2.5.1)", "psycopg2cffi (>=2.8.1)", "pymysql", "pyodbc", "pytest (>=2.7.1)", "python-dateutil", "python-dateutil (>=2.6)", "pytz (>=2014.2)"]
 timezone = ["python-dateutil"]
 url = ["furl (>=0.4.1)"]
 
 [[package]]
 name = "stack-data"
-version = "0.6.2"
+version = "0.6.3"
 description = "Extract data from python stack frames and tracebacks for informative displays"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "stack_data-0.6.3-py3-none-any.whl", hash = "sha256:d5558e0c25a4cb0853cddad3d77da9891a08cb85dd9f9f91b9f8cd66e511e695"},
+    {file = "stack_data-0.6.3.tar.gz", hash = "sha256:836a778de4fec4dcd1dcd89ed8abff8a221f58308462e1c4aa2a3cf30148f0b9"},
+]
 
 [package.dependencies]
 asttokens = ">=2.1.0"
@@ -2433,54 +3997,66 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
 name = "swagger-ui-bundle"
 version = "0.0.9"
 description = "swagger_ui_bundle - swagger-ui files in a pip package"
-category = "main"
 optional = false
 python-versions = "*"
+files = [
+    {file = "swagger_ui_bundle-0.0.9-py3-none-any.whl", hash = "sha256:cea116ed81147c345001027325c1ddc9ca78c1ee7319935c3c75d3669279d575"},
+    {file = "swagger_ui_bundle-0.0.9.tar.gz", hash = "sha256:b462aa1460261796ab78fd4663961a7f6f347ce01760f1303bbbdf630f11f516"},
+]
 
 [package.dependencies]
 Jinja2 = ">=2.0"
 
 [[package]]
 name = "synapseclient"
-version = "2.7.2"
-description = "A client for Synapse, a collaborative compute space  that allows scientists to share and analyze data together."
-category = "main"
+version = "3.1.1"
+description = "A client for Synapse, a collaborative, open-source research platform that allows teams to share data, track analyses, and collaborate."
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "synapseclient-3.1.1-py3-none-any.whl", hash = "sha256:d9b732b450ee5c69a8d6875058af6739e0e076eb214fa0d05e7ebb21a0106846"},
+    {file = "synapseclient-3.1.1.tar.gz", hash = "sha256:ab78a1202725d22c21f92798191c1862e779b2b31c01ff06f59789bb05fa1174"},
+]
 
 [package.dependencies]
 deprecated = ">=1.2.4,<2.0"
-importlib-metadata = "<5.0"
 keyring = ">=15,<23.5"
 "keyrings.alt" = {version = "3.1", markers = "sys_platform == \"linux\""}
 requests = ">=2.22.0,<3.0"
-urllib3 = "<2"
+urllib3 = ">=1.26.18,<2"
 
 [package.extras]
 boto3 = ["boto3 (>=1.7.0,<2.0)"]
-docs = ["sphinx (>=4.0,<5.0)", "sphinx-argparse (>=0.2,<0.3)"]
-pandas = ["pandas (>=0.25.0,<1.5)"]
+dev = ["black", "flake8 (>=3.7.0,<4.0)", "func-timeout (>=4.3,<5.0)", "pre-commit", "pytest (>=6.0.0,<7.0)", "pytest-mock (>=3.0,<4.0)", "pytest-rerunfailures (>=12.0,<13.0)", "pytest-xdist[psutil] (>=2.2,<3.0.0)"]
+docs = ["sphinx (>=4.0,<5.0)", "sphinx-argparse (>=0.2,<0.3)", "sphinx-rtd-theme"]
+pandas = ["pandas (>=1.5,<2.1)"]
 pysftp = ["pysftp (>=0.2.8,<0.3)"]
-tests = ["flake8 (>=3.7.0,<4.0)", "pytest (>=5.0.0,<7.0)", "pytest-mock (>=3.0,<4.0)", "pytest-xdist[psutil] (>=2.2,<3.0.0)"]
+tests = ["flake8 (>=3.7.0,<4.0)", "func-timeout (>=4.3,<5.0)", "pytest (>=6.0.0,<7.0)", "pytest-mock (>=3.0,<4.0)", "pytest-rerunfailures (>=12.0,<13.0)", "pytest-xdist[psutil] (>=2.2,<3.0.0)"]
 
 [[package]]
 name = "tabulate"
 version = "0.9.0"
 description = "Pretty-print tabular data"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "tabulate-0.9.0-py3-none-any.whl", hash = "sha256:024ca478df22e9340661486f85298cff5f6dcdba14f3813e8830015b9ed1948f"},
+    {file = "tabulate-0.9.0.tar.gz", hash = "sha256:0095b12bf5966de529c0feb1fa08671671b3368eec77d7ef7ab114be2c068b3c"},
+]
 
 [package.extras]
 widechars = ["wcwidth"]
 
 [[package]]
 name = "tenacity"
-version = "8.2.2"
+version = "8.2.3"
 description = "Retry code until it succeeds"
-category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
+files = [
+    {file = "tenacity-8.2.3-py3-none-any.whl", hash = "sha256:ce510e327a630c9e1beaf17d42e6ffacc88185044ad85cf74c0a8887c6a0f88c"},
+    {file = "tenacity-8.2.3.tar.gz", hash = "sha256:5398ef0d78e63f40007c1fb4c0bff96e1911394d2fa8d194f77619c05ff6cc8a"},
+]
 
 [package.extras]
 doc = ["reno", "sphinx", "tornado (>=4.5)"]
@@ -2489,9 +4065,12 @@ doc = ["reno", "sphinx", "tornado (>=4.5)"]
 name = "terminado"
 version = "0.17.1"
 description = "Tornado websocket backend for the Xterm.js Javascript terminal emulator library."
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "terminado-0.17.1-py3-none-any.whl", hash = "sha256:8650d44334eba354dd591129ca3124a6ba42c3d5b70df5051b6921d506fdaeae"},
+    {file = "terminado-0.17.1.tar.gz", hash = "sha256:6ccbbcd3a4f8a25a5ec04991f39a0b8db52dfcd487ea0e578d977e6752380333"},
+]
 
 [package.dependencies]
 ptyprocess = {version = "*", markers = "os_name != \"nt\""}
@@ -2506,9 +4085,12 @@ test = ["pre-commit", "pytest (>=7.0)", "pytest-timeout"]
 name = "tinycss2"
 version = "1.2.1"
 description = "A tiny CSS parser"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "tinycss2-1.2.1-py3-none-any.whl", hash = "sha256:2b80a96d41e7c3914b8cda8bc7f705a4d9c49275616e886103dd839dfc847847"},
+    {file = "tinycss2-1.2.1.tar.gz", hash = "sha256:8cff3a8f066c2ec677c06dbc7b45619804a6938478d9d73c284b29d14ecb0627"},
+]
 
 [package.dependencies]
 webencodings = ">=0.4"
@@ -2521,108 +4103,161 @@ test = ["flake8", "isort", "pytest"]
 name = "toml"
 version = "0.10.2"
 description = "Python Library for Tom's Obvious, Minimal Language"
-category = "main"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
+files = [
+    {file = "toml-0.10.2-py2.py3-none-any.whl", hash = "sha256:806143ae5bfb6a3c6e736a764057db0e6a0e05e338b5630894a5f779cabb4f9b"},
+    {file = "toml-0.10.2.tar.gz", hash = "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"},
+]
 
 [[package]]
 name = "tomli"
 version = "2.0.1"
 description = "A lil' TOML parser"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "tomli-2.0.1-py3-none-any.whl", hash = "sha256:939de3e7a6161af0c887ef91b7d41a53e7c5a1ca976325f429cb46ea9bc30ecc"},
+    {file = "tomli-2.0.1.tar.gz", hash = "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"},
+]
 
 [[package]]
 name = "tomlkit"
-version = "0.11.8"
+version = "0.12.1"
 description = "Style preserving TOML library"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "tomlkit-0.12.1-py3-none-any.whl", hash = "sha256:712cbd236609acc6a3e2e97253dfc52d4c2082982a88f61b640ecf0817eab899"},
+    {file = "tomlkit-0.12.1.tar.gz", hash = "sha256:38e1ff8edb991273ec9f6181244a6a391ac30e9f5098e7535640ea6be97a7c86"},
+]
 
 [[package]]
 name = "toolz"
 version = "0.12.0"
 description = "List processing tools and functional utilities"
-category = "main"
 optional = false
 python-versions = ">=3.5"
+files = [
+    {file = "toolz-0.12.0-py3-none-any.whl", hash = "sha256:2059bd4148deb1884bb0eb770a3cde70e7f954cfbbdc2285f1f2de01fd21eb6f"},
+    {file = "toolz-0.12.0.tar.gz", hash = "sha256:88c570861c440ee3f2f6037c4654613228ff40c93a6c25e0eba70d17282c6194"},
+]
 
 [[package]]
 name = "tornado"
-version = "6.3.2"
+version = "6.3.3"
 description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
-category = "main"
 optional = false
 python-versions = ">= 3.8"
+files = [
+    {file = "tornado-6.3.3-cp38-abi3-macosx_10_9_universal2.whl", hash = "sha256:502fba735c84450974fec147340016ad928d29f1e91f49be168c0a4c18181e1d"},
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+    {file = "tornado-6.3.3-cp38-abi3-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:7ac51f42808cca9b3613f51ffe2a965c8525cb1b00b7b2d56828b8045354f76a"},
+    {file = "tornado-6.3.3-cp38-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:71a8db65160a3c55d61839b7302a9a400074c9c753040455494e2af74e2501f2"},
+    {file = "tornado-6.3.3-cp38-abi3-musllinux_1_1_aarch64.whl", hash = "sha256:ceb917a50cd35882b57600709dd5421a418c29ddc852da8bcdab1f0db33406b0"},
+    {file = "tornado-6.3.3-cp38-abi3-musllinux_1_1_i686.whl", hash = "sha256:7d01abc57ea0dbb51ddfed477dfe22719d376119844e33c661d873bf9c0e4a16"},
+    {file = "tornado-6.3.3-cp38-abi3-musllinux_1_1_x86_64.whl", hash = "sha256:9dc4444c0defcd3929d5c1eb5706cbe1b116e762ff3e0deca8b715d14bf6ec17"},
+    {file = "tornado-6.3.3-cp38-abi3-win32.whl", hash = "sha256:65ceca9500383fbdf33a98c0087cb975b2ef3bfb874cb35b8de8740cf7f41bd3"},
+    {file = "tornado-6.3.3-cp38-abi3-win_amd64.whl", hash = "sha256:22d3c2fa10b5793da13c807e6fc38ff49a4f6e1e3868b0a6f4164768bb8e20f5"},
+    {file = "tornado-6.3.3.tar.gz", hash = "sha256:e7d8db41c0181c80d76c982aacc442c0783a2c54d6400fe028954201a2e032fe"},
+]
 
 [[package]]
 name = "tqdm"
-version = "4.65.0"
+version = "4.66.1"
 description = "Fast, Extensible Progress Meter"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "tqdm-4.66.1-py3-none-any.whl", hash = "sha256:d302b3c5b53d47bce91fea46679d9c3c6508cf6332229aa1e7d8653723793386"},
+    {file = "tqdm-4.66.1.tar.gz", hash = "sha256:d88e651f9db8d8551a62556d3cff9e3034274ca5d66e93197cf2490e2dcb69c7"},
+]
 
 [package.dependencies]
 colorama = {version = "*", markers = "platform_system == \"Windows\""}
 
 [package.extras]
-dev = ["py-make (>=0.1.0)", "twine", "wheel"]
+dev = ["pytest (>=6)", "pytest-cov", "pytest-timeout", "pytest-xdist"]
 notebook = ["ipywidgets (>=6)"]
 slack = ["slack-sdk"]
 telegram = ["requests"]
 
 [[package]]
 name = "traitlets"
-version = "5.9.0"
+version = "5.13.0"
 description = "Traitlets Python configuration system"
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "traitlets-5.13.0-py3-none-any.whl", hash = "sha256:baf991e61542da48fe8aef8b779a9ea0aa38d8a54166ee250d5af5ecf4486619"},
+    {file = "traitlets-5.13.0.tar.gz", hash = "sha256:9b232b9430c8f57288c1024b34a8f0251ddcc47268927367a0dd3eeaca40deb5"},
+]
 
 [package.extras]
 docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"]
-test = ["argcomplete (>=2.0)", "pre-commit", "pytest", "pytest-mock"]
+test = ["argcomplete (>=3.0.3)", "mypy (>=1.6.0)", "pre-commit", "pytest (>=7.0,<7.5)", "pytest-mock", "pytest-mypy-testing"]
+
+[[package]]
+name = "types-python-dateutil"
+version = "2.8.19.14"
+description = "Typing stubs for python-dateutil"
+optional = false
+python-versions = "*"
+files = [
+    {file = "types-python-dateutil-2.8.19.14.tar.gz", hash = "sha256:1f4f10ac98bb8b16ade9dbee3518d9ace017821d94b057a425b069f834737f4b"},
+    {file = "types_python_dateutil-2.8.19.14-py3-none-any.whl", hash = "sha256:f977b8de27787639986b4e28963263fd0e5158942b3ecef91b9335c130cb1ce9"},
+]
 
 [[package]]
 name = "typing-extensions"
 version = "4.5.0"
 description = "Backported and Experimental Type Hints for Python 3.7+"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "typing_extensions-4.5.0-py3-none-any.whl", hash = "sha256:fb33085c39dd998ac16d1431ebc293a8b3eedd00fd4a32de0ff79002c19511b4"},
+    {file = "typing_extensions-4.5.0.tar.gz", hash = "sha256:5cb5f4a79139d699607b3ef622a1dedafa84e115ab0024e0d9c044a9479ca7cb"},
+]
 
 [[package]]
 name = "tzdata"
 version = "2023.3"
 description = "Provider of IANA time zone data"
-category = "main"
 optional = false
 python-versions = ">=2"
+files = [
+    {file = "tzdata-2023.3-py2.py3-none-any.whl", hash = "sha256:7e65763eef3120314099b6939b5546db7adce1e7d6f2e179e3df563c70511eda"},
+    {file = "tzdata-2023.3.tar.gz", hash = "sha256:11ef1e08e54acb0d4f95bdb1be05da659673de4acbd21bf9c69e94cc5e907a3a"},
+]
 
 [[package]]
 name = "tzlocal"
-version = "5.0.1"
+version = "5.2"
 description = "tzinfo object for the local timezone"
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
+files = [
+    {file = "tzlocal-5.2-py3-none-any.whl", hash = "sha256:49816ef2fe65ea8ac19d19aa7a1ae0551c834303d5014c6d5a62e4cbda8047b8"},
+    {file = "tzlocal-5.2.tar.gz", hash = "sha256:8d399205578f1a9342816409cc1e46a93ebd5755e39ea2d85334bea911bf0e6e"},
+]
 
 [package.dependencies]
 tzdata = {version = "*", markers = "platform_system == \"Windows\""}
 
 [package.extras]
-devenv = ["black", "check-manifest", "flake8", "pyroma", "pytest (>=4.3)", "pytest-cov", "pytest-mock (>=3.3)", "zest.releaser"]
+devenv = ["check-manifest", "pytest (>=4.3)", "pytest-cov", "pytest-mock (>=3.3)", "zest.releaser"]
 
 [[package]]
 name = "uri-template"
 version = "1.3.0"
 description = "RFC 6570 URI Template Processor"
-category = "main"
 optional = false
 python-versions = ">=3.7"
+files = [
+    {file = "uri-template-1.3.0.tar.gz", hash = "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7"},
+    {file = "uri_template-1.3.0-py3-none-any.whl", hash = "sha256:a44a133ea12d44a0c0f06d7d42a52d71282e77e2f937d8abd5655b8d56fc1363"},
+]
 
 [package.extras]
 dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake8-commas", "flake8-comprehensions", "flake8-continuation", "flake8-datetimez", "flake8-docstrings", "flake8-import-order", "flake8-literal", "flake8-modern-annotations", "flake8-noqa", "flake8-pyproject", "flake8-requirements", "flake8-typechecking-import", "flake8-use-fstring", "mypy", "pep8-naming", "types-PyYAML"]
@@ -2631,38 +4266,48 @@ dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake
 name = "uritemplate"
 version = "4.1.1"
 description = "Implementation of RFC 6570 URI Templates"
-category = "main"
 optional = false
 python-versions = ">=3.6"
+files = [
+    {file = "uritemplate-4.1.1-py2.py3-none-any.whl", hash = "sha256:830c08b8d99bdd312ea4ead05994a38e8936266f84b9a7878232db50b044e02e"},
+    {file = "uritemplate-4.1.1.tar.gz", hash = "sha256:4346edfc5c3b79f694bccd6d6099a322bbeb628dbf2cd86eea55a456ce5124f0"},
+]
 
 [[package]]
 name = "urllib3"
-version = "1.26.16"
+version = "1.26.18"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+files = [
+    {file = "urllib3-1.26.18-py2.py3-none-any.whl", hash = "sha256:34b97092d7e0a3a8cf7cd10e386f401b3737364026c45e622aa02903dffe0f07"},
+    {file = "urllib3-1.26.18.tar.gz", hash = "sha256:f8ecc1bba5667413457c529ab955bf8c67b45db799d159066261719e328580a0"},
+]
 
 [package.extras]
-brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)", "brotlipy (>=0.6.0)"]
+brotli = ["brotli (==1.0.9)", "brotli (>=1.0.9)", "brotlicffi (>=0.8.0)", "brotlipy (>=0.6.0)"]
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+version = "2.0.23"
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 python-versions = "*"
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@@ -2672,19 +4317,25 @@ test = ["flake8 (>=2.4.0)", "isort (>=4.2.2)", "pytest (>=2.2.3)"]
 
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@@ -2694,20 +4345,26 @@ tests = ["pytest", "pytest-cov"]
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 description = "WebSocket client for Python with low level API options"
-category = "main"
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-category = "main"
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-websocket-client = [
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-    {file = "websocket_client-1.6.1-py3-none-any.whl", hash = "sha256:f1f9f2ad5291f0225a49efad77abf9e700b6fef553900623060dad6e26503b9d"},
-]
-werkzeug = [
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-    {file = "Werkzeug-2.1.2.tar.gz", hash = "sha256:1ce08e8093ed67d638d63879fd1ba3735817f7a80de3674d293f5984f25fb6e6"},
-]
-widgetsnbextension = [
-    {file = "widgetsnbextension-4.0.8-py3-none-any.whl", hash = "sha256:2e37f0ce9da11651056280c7efe96f2db052fe8fc269508e3724f5cbd6c93018"},
-    {file = "widgetsnbextension-4.0.8.tar.gz", hash = "sha256:9ec291ba87c2dfad42c3d5b6f68713fa18be1acd7476569516b2431682315c17"},
-]
-wrapt = [
+files = [
     {file = "wrapt-1.15.0-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:ca1cccf838cd28d5a0883b342474c630ac48cac5df0ee6eacc9c7290f76b11c1"},
     {file = "wrapt-1.15.0-cp27-cp27m-manylinux1_i686.whl", hash = "sha256:e826aadda3cae59295b95343db8f3d965fb31059da7de01ee8d1c40a60398b29"},
     {file = "wrapt-1.15.0-cp27-cp27m-manylinux1_x86_64.whl", hash = "sha256:5fc8e02f5984a55d2c653f5fea93531e9836abbd84342c1d1e17abc4a15084c2"},
@@ -4581,7 +4476,23 @@ wrapt = [
     {file = "wrapt-1.15.0-py3-none-any.whl", hash = "sha256:64b1df0f83706b4ef4cfb4fb0e4c2669100fd7ecacfb59e091fad300d4e04640"},
     {file = "wrapt-1.15.0.tar.gz", hash = "sha256:d06730c6aed78cee4126234cf2d071e01b44b915e725a6cb439a879ec9754a3a"},
 ]
-zipp = [
-    {file = "zipp-3.16.1-py3-none-any.whl", hash = "sha256:0b37c326d826d5ca35f2b9685cd750292740774ef16190008b00a0227c256fe0"},
-    {file = "zipp-3.16.1.tar.gz", hash = "sha256:857b158da2cbf427b376da1c24fd11faecbac5a4ac7523c3607f8a01f94c2ec0"},
+
+[[package]]
+name = "zipp"
+version = "3.17.0"
+description = "Backport of pathlib-compatible object wrapper for zip files"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "zipp-3.17.0-py3-none-any.whl", hash = "sha256:0e923e726174922dce09c53c59ad483ff7bbb8e572e00c7f7c46b88556409f31"},
+    {file = "zipp-3.17.0.tar.gz", hash = "sha256:84e64a1c28cf7e91ed2078bb8cc8c259cb19b76942096c8d7b84947690cabaf0"},
 ]
+
+[package.extras]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
+
+[metadata]
+lock-version = "2.0"
+python-versions = ">=3.9.0,<3.11"
+content-hash = "9b6667bb6094ab24849d6b47c8923dd8140a29ba14ffa45a0f4be52609b49f9c"
diff --git a/pyproject.toml b/pyproject.toml
index 9b32bdb5a..714512b84 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "schematicpy"
-version = "22.3.2"
+version = "23.11.1"
 description = "Package for biomedical data model and metadata ingress management"
 authors = [
     "Milen Nikolov <milen.nikolov@sagebase.org>",
@@ -54,7 +54,7 @@ pygsheets = "^2.0.4"
 PyYAML = "^6.0.0"
 rdflib = "^6.0.0"
 setuptools = "^66.0.0"
-synapseclient = "^2.7.0"
+synapseclient = "^3.1.1"
 tenacity = "^8.0.1"
 toml = "^0.10.2"
 Flask = "^2.0.0"
@@ -70,7 +70,7 @@ Flask-Cors = "^3.0.10"
 pdoc = "^12.2.0"
 dateparser = "^1.1.4"
 pandarallel = "^1.6.4"
-schematic-db = {version = "^0.0.29", extras = ["synapse"]}
+schematic-db = {version = "0.0.dev33", extras = ["synapse"]}
 pyopenssl = "^23.0.0"
 typing-extensions = "<4.6.0"
 
diff --git a/schematic/manifest/generator.py b/schematic/manifest/generator.py
index c9cb81cdf..778ba411d 100644
--- a/schematic/manifest/generator.py
+++ b/schematic/manifest/generator.py
@@ -54,7 +54,11 @@ def __init__(
         self.creds = services_creds["creds"]
 
         # schema root
-        self.root = root
+        if root:
+            self.root = root
+        # Raise an error if no DataType has been provided
+        else:
+            raise ValueError("No DataType has been provided.")
 
         # alphabetize valid values
         self.alphabetize = alphabetize_valid_values
@@ -79,12 +83,19 @@ def __init__(
 
         # additional metadata to add to manifest
         self.additional_metadata = additional_metadata
+   
+        # Check if the class is in the schema
+        root_in_schema = self.sg.se.is_class_in_schema(self.root)
+        
+        # If the class could not be found, give a notification
+        if not root_in_schema:
+            exception_message = f"The DataType entered ({self.root}) could not be found in the data model schema. " + \
+                                "Please confirm that the datatype is in the data model and that the spelling matches the class label in the .jsonld file."
+            raise LookupError(exception_message) 
 
         # Determine whether current data type is file-based
-        is_file_based = False
-        if self.root:
-            is_file_based = "Filename" in self.sg.get_node_dependencies(self.root)
-        self.is_file_based = is_file_based
+        self.is_file_based = "Filename" in self.sg.get_node_dependencies(self.root)
+
 
     def _attribute_to_letter(self, attribute, manifest_fields):
         """Map attribute to column letter in a google sheet"""
diff --git a/schematic/models/metadata.py b/schematic/models/metadata.py
index d10d27151..278f4c396 100644
--- a/schematic/models/metadata.py
+++ b/schematic/models/metadata.py
@@ -186,7 +186,7 @@ def get_component_requirements(
 
     # TODO: abstract validation in its own module
     def validateModelManifest(
-        self, manifestPath: str, rootNode: str, restrict_rules: bool = False, jsonSchema: str = None, project_scope: List = None,
+        self, manifestPath: str, rootNode: str, restrict_rules: bool = False, jsonSchema: str = None, project_scope: List = None, access_token: str = None,
     ) -> List[str]:
         """Check if provided annotations manifest dataframe satisfies all model requirements.
 
@@ -251,7 +251,16 @@ def validateModelManifest(
 
             return errors, warnings
 
-        errors, warnings, manifest = validate_all(self, errors, warnings, manifest, manifestPath, self.sg, jsonSchema, restrict_rules, project_scope)
+        errors, warnings, manifest = validate_all(self, 
+                                                  errors=errors, 
+                                                  warnings=warnings, 
+                                                  manifest=manifest, 
+                                                  manifestPath=manifestPath, 
+                                                  sg=self.sg, 
+                                                  jsonSchema=jsonSchema, 
+                                                  restrict_rules=restrict_rules, 
+                                                  project_scope=project_scope, 
+                                                  access_token=access_token)
         return errors, warnings
 
     def populateModelManifest(self, title, manifestPath: str, rootNode: str, return_excel = False) -> str:
@@ -328,7 +337,7 @@ def submit_metadata_manifest(
 
             # automatic JSON schema generation and validation with that JSON schema
             val_errors, val_warnings = self.validateModelManifest(
-                manifestPath=manifest_path, rootNode=validate_component, restrict_rules=restrict_rules, project_scope=project_scope,
+                manifestPath=manifest_path, rootNode=validate_component, restrict_rules=restrict_rules, project_scope=project_scope, access_token=access_token
             )
 
             # if there are no errors in validation process
diff --git a/schematic/models/validate_attribute.py b/schematic/models/validate_attribute.py
index da98b20ef..362a86fcc 100644
--- a/schematic/models/validate_attribute.py
+++ b/schematic/models/validate_attribute.py
@@ -27,6 +27,7 @@
                                             rule_in_rule_list,
                                             )
 
+from synapseclient.core.exceptions import SynapseNoCredentialsError
 
 logger = logging.getLogger(__name__)
 
@@ -564,13 +565,18 @@ class ValidateAttribute(object):
         - Add string length validator
     """
 
-    def get_target_manifests(target_component, project_scope: List):
+    def get_target_manifests(target_component, project_scope: List, access_token: str = None):
         t_manifest_search = perf_counter()
         target_manifest_IDs=[]
         target_dataset_IDs=[]
         
         #login
-        synStore = SynapseStorage(project_scope=project_scope)        
+        try:
+            synStore = SynapseStorage(access_token=access_token, project_scope=project_scope)        
+        except SynapseNoCredentialsError as e:
+            raise ValueError(
+                "No Synapse credentials were provided. Credentials must be provided to utilize cross-manfiest validation functionality."
+                ) from e
 
         #Get list of all projects user has access to
         projects = synStore.getStorageProjects(project_scope=project_scope)
@@ -893,7 +899,7 @@ def url_validation(self, val_rule: str, manifest_col: str, sg: SchemaGenerator,)
         return errors, warnings
 
     def cross_validation(
-        self, val_rule: str, manifest_col: pd.core.series.Series, project_scope: List, sg: SchemaGenerator,
+        self, val_rule: str, manifest_col: pd.core.series.Series, project_scope: List, sg: SchemaGenerator, access_token: str,
     ) -> List[List[str]]:
         """
         Purpose:
@@ -921,7 +927,7 @@ def cross_validation(
 
         
         #Get IDs of manifests with target component
-        synStore, target_manifest_IDs, target_dataset_IDs = ValidateAttribute.get_target_manifests(target_component,project_scope)
+        synStore, target_manifest_IDs, target_dataset_IDs = ValidateAttribute.get_target_manifests(target_component, project_scope, access_token)
 
         t_cross_manifest = perf_counter()
         #Read each manifest
diff --git a/schematic/models/validate_manifest.py b/schematic/models/validate_manifest.py
index 244e75d9a..a525d0e7b 100644
--- a/schematic/models/validate_manifest.py
+++ b/schematic/models/validate_manifest.py
@@ -62,7 +62,7 @@ def get_multiple_types_error(
         return ["NA", error_col, error_message, error_val]
 
     def validate_manifest_rules(
-        self, manifest: pd.core.frame.DataFrame, sg: SchemaGenerator, restrict_rules: bool, project_scope: List,
+        self, manifest: pd.core.frame.DataFrame, sg: SchemaGenerator, restrict_rules: bool, project_scope: List, access_token: Optional[str] = None,
     ) -> (pd.core.frame.DataFrame, List[List[str]]):
         """
         Purpose:
@@ -208,7 +208,7 @@ def validate_manifest_rules(
                         manifest[col] = manifest_col
                     elif validation_type.lower().startswith("match"):
                         vr_errors, vr_warnings = validation_method(
-                            self, rule, manifest[col], project_scope, sg,
+                            self, rule, manifest[col], project_scope, sg, access_token
                         )
                     else:
                         vr_errors, vr_warnings = validation_method(
@@ -256,9 +256,9 @@ def validate_manifest_values(self, manifest, jsonSchema, sg
         return errors, warnings
 
 
-def validate_all(self, errors, warnings, manifest, manifestPath, sg, jsonSchema, restrict_rules, project_scope: List):
+def validate_all(self, errors, warnings, manifest, manifestPath, sg, jsonSchema, restrict_rules, project_scope: List, access_token: str):
     vm = ValidateManifest(errors, manifest, manifestPath, sg, jsonSchema)
-    manifest, vmr_errors, vmr_warnings = vm.validate_manifest_rules(manifest, sg, restrict_rules, project_scope)
+    manifest, vmr_errors, vmr_warnings = vm.validate_manifest_rules(manifest, sg, restrict_rules, project_scope, access_token)
     if vmr_errors:
         errors.extend(vmr_errors)
     if vmr_warnings:
diff --git a/schematic/schemas/generator.py b/schematic/schemas/generator.py
index 8cb392470..530147736 100644
--- a/schematic/schemas/generator.py
+++ b/schematic/schemas/generator.py
@@ -340,6 +340,19 @@ def is_node_required(self, node_display_name: str) -> bool:
 
         return node_required
 
+    def get_node_display_name(self, node_label: str, mm_graph: nx.MultiDiGraph) -> list:
+        """Get display name associated with a given node label, return id if no display name.
+        Args:
+            node_label, str: Node to retrieve display name for
+        Returns:
+            node_display_name: display name of the node, or its id if it does not have a display name.
+        """
+        if "displayName" in mm_graph.nodes[node_label]:
+                    node_display_name = mm_graph.nodes[node_label]["displayName"]
+        else:
+            node_display_name = mm_graph.nodes[node_label]["id"].split(':')[1]
+        return node_display_name
+
     def get_nodes_display_names(
         self, node_list: List[str], mm_graph: nx.MultiDiGraph
     ) -> List[str]:
@@ -349,11 +362,10 @@ def get_nodes_display_names(
             node_list: List of nodes whose display names we need to retrieve.
 
         Returns:
-            List of display names.
+            List of display names, return id if no display name
         """
-        node_list_display_names = [
-            mm_graph.nodes[node]["displayName"] for node in node_list
-        ]
+
+        node_list_display_names = [self.get_node_display_name(node, mm_graph) for node in node_list]
 
         return node_list_display_names
 
@@ -430,8 +442,12 @@ def is_required(self, node_name: str, mm_graph: nx.MultiDiGraph) -> bool:
             Boolean value indicating if the node is required or not.
                 True: yes, it is required.
                 False: no, it is not required.
+            Return False, if no required key
         """
-        return mm_graph.nodes[node_name]["required"]
+        if "required" in mm_graph.nodes[node_name]:
+            return mm_graph.nodes[node_name]["required"]
+        else:
+            return False
 
     def get_json_schema_requirements(self, source_node: str, schema_name: str) -> Dict:
         """Consolidated method that aims to gather dependencies and value constraints across terms / nodes in a schema.org schema and store them in a jsonschema /JSON Schema schema.
@@ -505,7 +521,7 @@ def get_json_schema_requirements(self, source_node: str, schema_name: str) -> Di
                 )
 
                 # get process node display name
-                node_display_name = mm_graph.nodes[process_node]["displayName"]
+                node_display_name = self.get_node_display_name(node_label=process_node, mm_graph=mm_graph)
 
                 # updating map between node and node's valid values
                 for n in node_range_d:
diff --git a/schematic/store/synapse.py b/schematic/store/synapse.py
index 40915824b..f6e7e7096 100644
--- a/schematic/store/synapse.py
+++ b/schematic/store/synapse.py
@@ -800,7 +800,7 @@ def getProjectManifests(self, projectId: str) -> List[str]:
                 
         return manifests
 
-    def upload_project_manifests_to_synapse(self, projectId: str) -> List[str]:
+    def upload_project_manifests_to_synapse(self, sg: SchemaGenerator, projectId: str) -> List[str]:
         """Upload all metadata manifest files across all datasets in a specified project as tables in Synapse.
 
         Returns: String of all the manifest_table_ids of all the manifests that have been loaded.
@@ -822,7 +822,7 @@ def upload_project_manifests_to_synapse(self, projectId: str) -> List[str]:
                 manifest_name = manifest_info["properties"]["name"]
                 manifest_path = manifest_info["path"]
                 manifest_df = load_df(manifest_path)
-                manifest_table_id = uploadDB(manifest, datasetId, datasetName)
+                manifest_table_id = uploadDB(sg=sg, manifest=manifest, datasetId=datasetId, table_name=datasetName)
                 manifest_loaded.append(datasetName)
         return manifest_loaded
 
@@ -952,7 +952,7 @@ def get_table_info(self, datasetId: str = None, projectId: str = None) -> List[s
 
     @missing_entity_handler
     def uploadDB(self, 
-        sg: SchemaGenerator, 
+        sg: SchemaGenerator,
         manifest: pd.DataFrame, 
         datasetId: str, 
         table_name: str, 
@@ -964,7 +964,7 @@ def uploadDB(self,
         Method to upload a database to an asset store. In synapse, this will upload a metadata table
         
         Args:
-            se: schemaExplorer object
+            sg: schemaGenerator object
             manifest: pd.Df manifest to upload
             datasetId: synID of the dataset for the manifest
             table_name: name of the table to be uploaded
@@ -981,7 +981,7 @@ def uploadDB(self,
         """
         
 
-        col_schema, table_manifest = self.formatDB(sg, manifest, useSchemaLabel)
+        col_schema, table_manifest = self.formatDB(sg=sg, manifest=manifest, useSchemaLabel=useSchemaLabel)
 
         manifest_table_id = self.buildDB(datasetId, table_name, col_schema, table_manifest, table_manipulation, sg, restrict,)
 
@@ -992,7 +992,7 @@ def formatDB(self, sg, manifest, useSchemaLabel):
         Method to format a manifest appropriatly for upload as table
         
         Args:
-            se: schemaExplorer object
+            sg: schemaGenerator object
             manifest: pd.Df manifest to upload
             useSchemaLabel: bool whether to use schemaLabel (True) or display label (False)
 
@@ -1499,13 +1499,13 @@ def upload_manifest_as_table(
         """      
         # Upload manifest as a table, get the ID and updated manifest.
         manifest_synapse_table_id, manifest, table_manifest = self.uploadDB(
-                                                    schemaGenerator,
-                                                    manifest,
-                                                    datasetId,
-                                                    table_name,
-                                                    restrict,
-                                                    useSchemaLabel,
-                                                    table_manipulation)
+                                                    sg=schemaGenerator,
+                                                    manifest=manifest,
+                                                    datasetId=datasetId,
+                                                    table_name=table_name,
+                                                    restrict=restrict,
+                                                    useSchemaLabel=useSchemaLabel,
+                                                    table_manipulation=table_manipulation)
 
         manifest = self.add_annotations_to_entities_files(se, schemaGenerator, manifest, manifest_record_type, datasetId, hideBlanks, manifest_synapse_table_id)
         # Load manifest to synapse as a CSV File
@@ -1518,13 +1518,13 @@ def upload_manifest_as_table(
         
         # Update manifest Synapse table with new entity id column.
         manifest_synapse_table_id, manifest, table_manifest = self.uploadDB(
-                                                    schemaGenerator,
-                                                    manifest, 
-                                                    datasetId, 
-                                                    table_name,  
-                                                    restrict,
+                                                    sg=schemaGenerator,
+                                                    manifest=manifest,
+                                                    datasetId=datasetId,
+                                                    table_name=table_name,
+                                                    restrict=restrict,
                                                     useSchemaLabel=useSchemaLabel,
-                                                    table_manipulation='update',)
+                                                    table_manipulation='update')
 
         # Set annotations for the table manifest
         manifest_annotations = self.format_manifest_annotations(manifest, manifest_synapse_table_id)
@@ -1605,13 +1605,13 @@ def upload_manifest_combo(
             manifest_synapse_file_id (str): SynID of manifest csv uploaded to synapse.
         """
         manifest_synapse_table_id, manifest, table_manifest = self.uploadDB(
-                                                    se,
-                                                    manifest,
-                                                    datasetId,
-                                                    table_name,
-                                                    restrict,
+                                                    sg=schemaGenerator,
+                                                    manifest=manifest,
+                                                    datasetId=datasetId,
+                                                    table_name=table_name,
+                                                    restrict=restrict,
                                                     useSchemaLabel=useSchemaLabel,
-                                                    table_manipulation=table_manipulation,)
+                                                    table_manipulation=table_manipulation)
 
         manifest = self.add_annotations_to_entities_files(se, schemaGenerator, manifest, manifest_record_type, datasetId, hideBlanks, manifest_synapse_table_id)
         
@@ -1625,13 +1625,13 @@ def upload_manifest_combo(
         
         # Update manifest Synapse table with new entity id column.
         manifest_synapse_table_id, manifest, table_manifest = self.uploadDB(
-                                                                se,
-                                                                manifest,
-                                                                datasetId,
-                                                                table_name,
-                                                                restrict,
+                                                                sg=schemaGenerator,
+                                                                manifest=manifest,
+                                                                datasetId=datasetId,
+                                                                table_name=table_name,
+                                                                restrict=restrict,
                                                                 useSchemaLabel=useSchemaLabel,
-                                                                table_manipulation='update',)
+                                                                table_manipulation='update')
 
         # Set annotations for the table manifest
         manifest_annotations = self.format_manifest_annotations(manifest, manifest_synapse_table_id)
diff --git a/schematic_api/api/openapi/api.yaml b/schematic_api/api/openapi/api.yaml
index 850baab57..ba04b659d 100644
--- a/schematic_api/api/openapi/api.yaml
+++ b/schematic_api/api/openapi/api.yaml
@@ -9,12 +9,23 @@ info:
 servers:
   - url: /v1
 
+components:
+  securitySchemes:
+    access_token:
+      type: http
+      scheme: bearer
+      bearerFormat: JWT
+      x-bearerInfoFunc: schematic_api.api.security_controller_.info_from_bearerAuth
+
 # TO DO: refactor query parameters and remove access_token
 paths:
   /manifest/generate:
     get:
       summary: Endpoint to facilitate manifest generation
       description: Endpoint to create dynamically create metadata manifest files
+      security:
+        - access_token: []
+        - {}
       parameters:
         - in: query
           name: schema_url
@@ -24,12 +35,6 @@ paths:
           example: >-
             https://raw.githubusercontent.com/Sage-Bionetworks/schematic/develop/tests/data/example.model.jsonld
           required: true
-        - in: query
-          name: access_token
-          schema:
-            type: string
-          description: Token is needed if getting an existing manifest on AWS
-          required: false
         - in: query
           name: title
           schema:
@@ -77,7 +82,7 @@ paths:
           schema:
             type: string
             nullable: true
-          description: ID of view listing all project data assets. E.g. for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. E.g. for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           required: false
         - in: query
           name: output_format
@@ -111,15 +116,9 @@ paths:
     get:
       summary: Endpoint to download an existing manifest by using a manifest id
       description: Endpoint to download an existing manifest by using a manifest id
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: manifest_id
           schema:
@@ -160,21 +159,15 @@ paths:
     get:
       summary: Endpoint to download an existing manifest by using a dataset id
       description: Endpoint to download an existing manifest by using a dataset id
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn28559058
           required: true
         - in: query
@@ -225,6 +218,9 @@ paths:
                   description: Upload a json or a csv file. 
                   type: string
                   format: binary
+      security:
+        - access_token: []
+        - {}
       parameters:
         - in: query
           name: schema_url
@@ -265,6 +261,24 @@ paths:
           "Cancer Type": "Breast",
           "Family History": "Breast, Lung",
           }]'
+        - in: query
+          name: asset_view
+          schema:
+            type: string
+            nullable: false
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project (i.e. master_fileview_id in config_example.yml). Required for validating manifests involving cross-manifest validation.
+          example: syn23643253
+          required: false
+        - in: query
+          name: project_scope
+          schema:
+            type: array
+            items: 
+              type: string
+            nullable: false
+          description: List, a subset of the projects contained within the asset view that are relevant for the current operation. Speeds up some operations that interact with Synapse. Relevant for validating manifests involving cross-manifest validation, but optional.
+          example: ['syn23643250', 'syn47218127', 'syn47218347']
+          required: false
 
       operationId: schematic_api.api.routes.validate_manifest_route
       responses:
@@ -299,6 +313,8 @@ paths:
                   description: Upload a json or a csv file. 
                   type: string
                   format: binary
+      security:
+        - access_token: []
       parameters:
         - in: query
           name: schema_url
@@ -343,20 +359,13 @@ paths:
           description: If true, annotations with blank values will be hidden from a dataset's annotation list in Synaspe. If false, annotations with blank values will be displayed. Default to false
           required: false
           example: false
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
-          example: syn28559058
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
+          example: syn23643253
           required: true
         - in: query
           name: json_str
@@ -388,6 +397,16 @@ paths:
             type: boolean
             default: true
           required: false
+        - in: query
+          name: project_scope
+          schema:
+            type: array
+            items: 
+              type: string
+            nullable: false
+          description: List, a subset of the projects contained within the asset view that are relevant for the current operation. Speeds up some operations that interact with Synapse.
+          example: ['syn23643250', 'syn47218127', 'syn47218347']
+          required: false
       operationId: schematic_api.api.routes.submit_manifest_route
       responses:
         "200":
@@ -499,21 +518,15 @@ paths:
       summary:  Get datatype of attributes in manifest
       description: Get datatype of attributes in manifest
       operationId: schematic_api.api.routes.get_manifest_datatype
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
         - in: query
@@ -536,21 +549,15 @@ paths:
       summary: Get all storage projects the current user has access to
       description: Gets all storage projects the current user has access to, within the scope of the 'storageFileview' attribute.
       operationId: schematic_api.api.routes.get_storage_projects
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
       responses:
@@ -565,21 +572,15 @@ paths:
       summary: Gets all datasets in folder under a given storage project that the current user has access to.
       description: Gets all datasets in folder under a given storage project that the current user has access to.
       operationId: schematic_api.api.routes.get_storage_projects_datasets
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
         - in: query
@@ -602,21 +603,15 @@ paths:
       summary: Get all files in a given dataset folder
       description: Get all files in a given dataset folder
       operationId: schematic_api.api.routes.get_files_storage_dataset
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
         - in: query
@@ -655,21 +650,15 @@ paths:
       summary: Retrieve asset view table as a dataframe.
       description: Retrieve asset view table as a dataframe.
       operationId: schematic_api.api.routes.get_asset_view_table
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
         - in: query
@@ -692,15 +681,9 @@ paths:
       summary: Gets all metadata manifest files across all datasets in a specified project.
       description: Gets all metadata manifest files across all datasets in a specified project.
       operationId: schematic_api.api.routes.get_project_manifests
+      security:
+        - access_token: []
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: project_id
           schema:
@@ -714,7 +697,7 @@ paths:
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
       responses:
@@ -740,15 +723,9 @@ paths:
       summary: Check type of an entity
       description: Check type of an entity and return entity type
       operationId: schematic_api.api.routes.check_entity_type
+      security:
+        - access_token: []      
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: entity_id
           schema:
@@ -770,21 +747,15 @@ paths:
       summary: Check if a file or a folder is in a given asset view. Return "true" or "false"
       description: Check if a file or a folder is in a given asset view. Return "true" or "false"
       operationId: schematic_api.api.routes.check_if_files_in_assetview
+      security:
+        - access_token: []      
       parameters:
-        - in: query
-          name: access_token
-          schema:
-            type: string
-            nullable: false
-          description: Token
-          example: Token
-          required: true
         - in: query
           name: asset_view
           schema:
             type: string
             nullable: false
-          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview in config.yml)
+          description: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.(i.e. master_fileview_id in config_example.yml)
           example: syn23643253
           required: true
         - in: query
diff --git a/schematic_api/api/routes.py b/schematic_api/api/routes.py
index ba9b1a7bc..1e3c6dc94 100644
--- a/schematic_api/api/routes.py
+++ b/schematic_api/api/routes.py
@@ -14,6 +14,7 @@
 from flask_cors import cross_origin
 from flask import send_from_directory
 from flask import current_app as app
+from flask import request
 
 import pandas as pd
 import json
@@ -146,6 +147,18 @@ def convert_json_file_to_csv(self, file_key):
         else: 
             temp_path = save_file(file_key='file_name')
             return temp_path
+
+def get_access_token() -> str:
+    """Get access token from header"""
+    bearer_token = None
+    # Check if the Authorization header is present
+    if "Authorization" in request.headers:
+        auth_header = request.headers["Authorization"]
+
+        # Ensure the header starts with 'Bearer ' and retrieve the token
+        if auth_header.startswith("Bearer "):
+            bearer_token = auth_header.split(" ")[1]
+    return bearer_token
         
 def parse_bool(str_bool):
     if str_bool.lower().startswith('t'):
@@ -196,7 +209,7 @@ def get_temp_jsonld(schema_url):
     return tmp_file.name
 
 # @before_request
-def get_manifest_route(schema_url: str, use_annotations: bool, dataset_ids=None, asset_view = None, output_format=None, title=None, access_token=None, strict_validation:bool=True):
+def get_manifest_route(schema_url: str, use_annotations: bool, dataset_ids=None, asset_view = None, output_format=None, title=None, strict_validation:bool=True):
     """Get the immediate dependencies that are related to a given source node.
         Args:
             schema_url: link to data model in json ld format
@@ -205,12 +218,14 @@ def get_manifest_route(schema_url: str, use_annotations: bool, dataset_ids=None,
             output_format: contains three option: "excel", "google_sheet", and "dataframe". if set to "excel", return an excel spreadsheet
             use_annotations: Whether to use existing annotations during manifest generation
             asset_view: ID of view listing all project data assets. For example, for Synapse this would be the Synapse ID of the fileview listing all data assets for a given project.
-            access_token: Token
             strict: bool, strictness with which to apply validation rules to google sheets.
         Returns:
             Googlesheet URL (if sheet_url is True), or pandas dataframe (if sheet_url is False).
     """
 
+    # Get access token from request header
+    access_token = get_access_token()
+
     # call config_handler()
     config_handler(asset_view = asset_view)
 
@@ -251,7 +266,8 @@ def get_manifest_route(schema_url: str, use_annotations: bool, dataset_ids=None,
                     f"Please check your submission and try again."
                 )
 
-
+    # Since this function is called in `get_manifest_route`, 
+    # it can use the access_token passed in from there and retain `access_token` as a parameter
     def create_single_manifest(data_type, title, dataset_id=None, output_format=None, access_token=None, strict=strict_validation):
         # create object of type ManifestGenerator
         manifest_generator = ManifestGenerator(
@@ -323,13 +339,16 @@ def create_single_manifest(data_type, title, dataset_id=None, output_format=None
 
 #####profile validate manifest route function 
 #@profile(sort_by='cumulative', strip_dirs=True)
-def validate_manifest_route(schema_url, data_type, restrict_rules=None, json_str=None):
+def validate_manifest_route(schema_url, data_type, restrict_rules=None, json_str=None, asset_view=None, project_scope = None):
+    # Access token now stored in request header
+    access_token = get_access_token()
+    
     # if restrict rules is set to None, default it to False
     if not restrict_rules:
         restrict_rules=False
         
     # call config_handler()
-    config_handler()
+    config_handler(asset_view = asset_view)
 
     #If restrict_rules parameter is set to None, then default it to False 
     if not restrict_rules:
@@ -351,7 +370,7 @@ def validate_manifest_route(schema_url, data_type, restrict_rules=None, json_str
     )
 
     errors, warnings = metadata_model.validateModelManifest(
-        manifestPath=temp_path, rootNode=data_type, restrict_rules=restrict_rules
+        manifestPath=temp_path, rootNode=data_type, restrict_rules=restrict_rules, project_scope=project_scope, access_token=access_token
     )
     
     res_dict = {"errors": errors, "warnings": warnings}
@@ -360,7 +379,15 @@ def validate_manifest_route(schema_url, data_type, restrict_rules=None, json_str
 
 #####profile validate manifest route function 
 #@profile(sort_by='cumulative', strip_dirs=True)
-def submit_manifest_route(schema_url, asset_view=None, manifest_record_type=None, json_str=None, table_manipulation=None, data_type=None, hide_blanks=False):
+def submit_manifest_route(schema_url, 
+                          asset_view=None, 
+                          manifest_record_type=None, 
+                          json_str=None, 
+                          table_manipulation=None, 
+                          data_type=None, 
+                          hide_blanks=False, 
+                          project_scope=None,
+                          ):
     # call config_handler()
     config_handler(asset_view = asset_view)
 
@@ -377,7 +404,8 @@ def submit_manifest_route(schema_url, asset_view=None, manifest_record_type=None
 
     metadata_model = initalize_metadata_model(schema_url)
 
-    access_token = connexion.request.args["access_token"]
+    # Access token now stored in request header
+    access_token = get_access_token()
 
 
     use_schema_label = connexion.request.args["use_schema_label"]
@@ -407,7 +435,9 @@ def submit_manifest_route(schema_url, asset_view=None, manifest_record_type=None
         restrict_rules = restrict_rules, 
         hide_blanks=hide_blanks,
         table_manipulation = table_manipulation, 
-        use_schema_label=use_schema_label)
+        use_schema_label=use_schema_label,
+        project_scope=project_scope,
+        )
 
     return manifest_id
 
@@ -429,7 +459,10 @@ def populate_manifest_route(schema_url, title=None, data_type=None, return_excel
 
     return populated_manifest_link
 
-def get_storage_projects(access_token, asset_view):
+def get_storage_projects(asset_view):
+    # Access token now stored in request header
+    access_token = get_access_token()
+
     # call config handler 
     config_handler(asset_view=asset_view)
 
@@ -441,7 +474,10 @@ def get_storage_projects(access_token, asset_view):
     
     return lst_storage_projects
 
-def get_storage_projects_datasets(access_token, asset_view, project_id):
+def get_storage_projects_datasets(asset_view, project_id):
+    # Access token now stored in request header
+    access_token = get_access_token()
+
     # call config handler
     config_handler(asset_view=asset_view)
 
@@ -453,7 +489,10 @@ def get_storage_projects_datasets(access_token, asset_view, project_id):
     
     return sorted_dataset_lst
 
-def get_files_storage_dataset(access_token, asset_view, dataset_id, full_path, file_names=None):
+def get_files_storage_dataset(asset_view, dataset_id, full_path, file_names=None):
+    # Access token now stored in request header
+    access_token = get_access_token()
+
     # call config handler
     config_handler(asset_view=asset_view)
 
@@ -468,7 +507,10 @@ def get_files_storage_dataset(access_token, asset_view, dataset_id, full_path, f
     file_lst = store.getFilesInStorageDataset(datasetId=dataset_id, fileNames=file_names, fullpath=full_path)
     return file_lst
 
-def check_if_files_in_assetview(access_token, asset_view, entity_id):
+def check_if_files_in_assetview(asset_view, entity_id):
+    # Access token now stored in request header
+    access_token = get_access_token()
+    
     # call config handler 
     config_handler(asset_view=asset_view)
 
@@ -480,7 +522,10 @@ def check_if_files_in_assetview(access_token, asset_view, entity_id):
 
     return if_exists
 
-def check_entity_type(access_token, entity_id):
+def check_entity_type(entity_id):
+    # Access token now stored in request header
+    access_token = get_access_token()
+        
     # call config handler 
     config_handler()
 
@@ -546,17 +591,19 @@ def get_viz_tangled_tree_layers(schema_url, figure_type):
 
     return layers[0]
 
-def download_manifest(access_token, manifest_id, new_manifest_name='', as_json=True):
+def download_manifest(manifest_id, new_manifest_name='', as_json=True):
     """
     Download a manifest based on a given manifest id. 
     Args:
-        access_token: token of asset store
         manifest_syn_id: syn id of a manifest
         newManifestName: new name of a manifest that gets downloaded.
         as_json: boolean; If true, return a manifest as a json. Default to True
     Return: 
         file path of the downloaded manifest
     """
+    # Access token now stored in request header
+    access_token = get_access_token()
+
     # call config_handler()
     config_handler()
 
@@ -576,7 +623,10 @@ def download_manifest(access_token, manifest_id, new_manifest_name='', as_json=T
         return manifest_local_file_path
 
 #@profile(sort_by='cumulative', strip_dirs=True)  
-def download_dataset_manifest(access_token, dataset_id, asset_view, as_json, new_manifest_name=''):
+def download_dataset_manifest(dataset_id, asset_view, as_json, new_manifest_name=''):
+    # Access token now stored in request header
+    access_token = get_access_token()
+        
     # call config handler
     config_handler(asset_view=asset_view)
 
@@ -600,7 +650,10 @@ def download_dataset_manifest(access_token, dataset_id, asset_view, as_json, new
 
     return manifest_local_file_path
 
-def get_asset_view_table(access_token, asset_view, return_type):
+def get_asset_view_table(asset_view, return_type):
+    # Access token now stored in request header
+    access_token = get_access_token()
+
     # call config handler
     config_handler(asset_view=asset_view)
 
@@ -621,7 +674,10 @@ def get_asset_view_table(access_token, asset_view, return_type):
         return export_path
 
 
-def get_project_manifests(access_token, project_id, asset_view):
+def get_project_manifests(project_id, asset_view):
+    # Access token now stored in request header
+    access_token = get_access_token()
+        
     # use the default asset view from config
     config_handler(asset_view=asset_view)
 
@@ -633,7 +689,10 @@ def get_project_manifests(access_token, project_id, asset_view):
 
     return lst_manifest
 
-def get_manifest_datatype(access_token, manifest_id, asset_view):
+def get_manifest_datatype(manifest_id, asset_view):
+    # Access token now stored in request header
+    access_token = get_access_token()
+    
     # use the default asset view from config
     config_handler(asset_view=asset_view)
 
diff --git a/schematic_api/api/security_controller_.py b/schematic_api/api/security_controller_.py
new file mode 100644
index 000000000..ee336dcb0
--- /dev/null
+++ b/schematic_api/api/security_controller_.py
@@ -0,0 +1,14 @@
+from typing import List
+
+
+def info_from_bearerAuth(token):
+    """
+    Check and retrieve authentication information from custom bearer token.
+    Returned value will be passed in 'token_info' parameter of your operation function, if there is one.
+    'sub' or 'uid' will be set in 'user' parameter of your operation function, if there is one.
+    :param token Token provided by Authorization header
+    :type token: str
+    :return: Decoded token information or None if token is invalid
+    :rtype: dict | None
+    """
+    return {"uid": "user_id"}
\ No newline at end of file


Test patch:
diff --git a/.github/workflows/api_test.yml b/.github/workflows/api_test.yml
index fd54e8d9e..103b1a98d 100644
--- a/.github/workflows/api_test.yml
+++ b/.github/workflows/api_test.yml
@@ -15,7 +15,7 @@ jobs:
   test:
     runs-on: ubuntu-latest
     env:
-      POETRY_VERSION:  1.2.0
+      POETRY_VERSION:  1.3.0
     strategy:
       fail-fast: false
       matrix:
@@ -85,4 +85,4 @@ jobs:
         if: ${{ false == inputs.perform_benchmarking }}
         run: >
           source .venv/bin/activate;
-          pytest -m "schematic_api and not submission and not rule_benchmark"
\ No newline at end of file
+          pytest -m "schematic_api and not submission and not rule_benchmark"
diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index dbe438b37..720dcfcae 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -27,7 +27,7 @@ jobs:
   test:
     runs-on: ubuntu-latest
     env:
-      POETRY_VERSION:  1.2.0
+      POETRY_VERSION:  1.3.0
     strategy:
       fail-fast: false
       matrix:
@@ -127,7 +127,7 @@ jobs:
         if: ${{ contains(github.event.head_commit.message, 'runcombos') }}
         run: >
           source .venv/bin/activate;
-          pytest --cov-report=term --cov-report=html:htmlcov --cov=schematic/
+          pytest --durations=0 --cov-report=term --cov-report=html:htmlcov --cov=schematic/
           -m "not (google_credentials_needed or schematic_api or table_operations)"
 
       - name: Run tests
@@ -137,7 +137,7 @@ jobs:
         if: ${{ false == contains(github.event.head_commit.message, 'runcombos') }}
         run: >
           source .venv/bin/activate;
-          pytest --cov-report=term --cov-report=html:htmlcov --cov=schematic/
+          pytest --durations=0 --cov-report=term --cov-report=html:htmlcov --cov=schematic/
           -m "not (google_credentials_needed or rule_combos or schematic_api or table_operations)"
 
       - name: Upload pytest test results
diff --git a/tests/conftest.py b/tests/conftest.py
index f19b4a9dc..644675355 100644
--- a/tests/conftest.py
+++ b/tests/conftest.py
@@ -63,7 +63,7 @@ def get_schema_explorer(path=None, *paths):
         return se
 
     @staticmethod
-    def get_python_version(self):
+    def get_python_version():
         version=sys.version
         base_version=".".join(version.split('.')[0:2])
 
@@ -72,7 +72,7 @@ def get_python_version(self):
     @staticmethod
     def get_python_project(self):
 
-        version = self.get_python_version(Helpers)
+        version = self.get_python_version()
 
         python_projects = {
             "3.7":  "syn47217926",
diff --git a/tests/data/example.model.csv b/tests/data/example.model.csv
index f15db469c..f88948758 100644
--- a/tests/data/example.model.csv
+++ b/tests/data/example.model.csv
@@ -1,4 +1,5 @@
 Attribute,Description,Valid Values,DependsOn,Properties,Required,Parent,DependsOn Component,Source,Validation Rules
+Component,,,,,TRUE,,,,
 Patient,,,"Patient ID, Sex, Year of Birth, Diagnosis, Component",,FALSE,DataType,,,
 Patient ID,,,,,TRUE,DataProperty,,,
 Sex,,"Female, Male, Other",,,TRUE,DataProperty,,,
diff --git a/tests/data/example.model.jsonld b/tests/data/example.model.jsonld
index 6f29cbf7b..6666bb09e 100644
--- a/tests/data/example.model.jsonld
+++ b/tests/data/example.model.jsonld
@@ -1972,6 +1972,23 @@
                 "@id": "bts:OntologyClass"
             }
         },
+        {
+            "@id": "bts:Component",
+            "@type": "rdfs:Class",
+            "rdfs:comment": "TBD",
+            "rdfs:label": "Component",
+            "rdfs:subClassOf": [
+                {
+                    "@id": "schema:Thing"
+                }
+            ],
+            "schema:isPartOf": {
+                "@id": "http://schema.biothings.io"
+            },
+            "sms:displayName": "Component",
+            "sms:required": "sms:true",
+            "sms:validationRules": []
+        },
         {
             "@id": "bts:Patient",
             "@type": "rdfs:Class",
@@ -3009,23 +3026,6 @@
             "sms:required": "sms:true",
             "sms:validationRules": []
         },
-        {
-            "@id": "bts:Component",
-            "@type": "rdfs:Class",
-            "rdfs:comment": "TBD",
-            "rdfs:label": "Component",
-            "rdfs:subClassOf": [
-                {
-                    "@id": "bts:Patient"
-                }
-            ],
-            "schema:isPartOf": {
-                "@id": "http://schema.biothings.io"
-            },
-            "sms:displayName": "Component",
-            "sms:required": "sms:false",
-            "sms:validationRules": []
-        },
         {
             "@id": "bts:Female",
             "@type": "rdfs:Class",
diff --git a/tests/test_api.py b/tests/test_api.py
index eb690d59a..9d69c63b2 100644
--- a/tests/test_api.py
+++ b/tests/test_api.py
@@ -93,18 +93,24 @@ def syn_token(config:Configuration):
         token = config_parser["authentication"]["authtoken"]
     yield token
 
+@pytest.fixture
+def request_headers(syn_token):
+    headers = {
+        "Authorization": "Bearer " + syn_token
+    }
+    yield headers
+
 @pytest.mark.schematic_api
 class TestSynapseStorage:
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.parametrize("return_type", ["json", "csv"])
-    def test_get_storage_assets_tables(self, client, syn_token, return_type):
+    def test_get_storage_assets_tables(self, client, return_type, request_headers):
         params = {
-            "access_token": syn_token,
             "asset_view": "syn23643253",
             "return_type": return_type
         }
 
-        response = client.get('http://localhost:3001/v1/storage/assets/tables', query_string=params)
+        response = client.get('http://localhost:3001/v1/storage/assets/tables', query_string=params, headers=request_headers)
 
         assert response.status_code == 200
 
@@ -121,13 +127,12 @@ def test_get_storage_assets_tables(self, client, syn_token, return_type):
             os.remove(response_dt)
         else: 
             pass
-
+    
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.parametrize("full_path", [True, False])
     @pytest.mark.parametrize("file_names", [None, "Sample_A.txt"])
-    def test_get_dataset_files(self,full_path, file_names, syn_token, client):
+    def test_get_dataset_files(self,full_path, file_names, request_headers, client):
         params = {
-            "access_token": syn_token,
             "asset_view": "syn23643253",
             "dataset_id": "syn23643250",
             "full_path": full_path,
@@ -136,7 +141,7 @@ def test_get_dataset_files(self,full_path, file_names, syn_token, client):
         if file_names:
             params["file_names"] = file_names
         
-        response = client.get('http://localhost:3001/v1/storage/dataset/files', query_string=params)
+        response = client.get('http://localhost:3001/v1/storage/dataset/files', query_string=params, headers=request_headers)
 
         assert response.status_code == 200
         response_dt = json.loads(response.data)
@@ -154,52 +159,48 @@ def test_get_dataset_files(self,full_path, file_names, syn_token, client):
                 assert ["syn25705259","Boolean Test"] and ["syn23667202","DataTypeX_table"] in response_dt
         
     @pytest.mark.synapse_credentials_needed
-    def test_get_storage_project_dataset(self, syn_token, client):
+    def test_get_storage_project_dataset(self, request_headers, client):
         params = {
-        "access_token": syn_token,
         "asset_view": "syn23643253",
         "project_id": "syn26251192"
         }
 
-        response = client.get("http://localhost:3001/v1/storage/project/datasets", query_string = params)
+        response = client.get("http://localhost:3001/v1/storage/project/datasets", query_string = params, headers = request_headers)
         assert response.status_code == 200
         response_dt = json.loads(response.data)
         assert ["syn26251193","Issue522"] in response_dt
 
     @pytest.mark.synapse_credentials_needed
-    def test_get_storage_project_manifests(self, syn_token, client):
+    def test_get_storage_project_manifests(self, request_headers, client):
 
         params = {
-        "access_token": syn_token,
         "asset_view": "syn23643253",
         "project_id": "syn30988314"
         }
 
-        response = client.get("http://localhost:3001/v1/storage/project/manifests", query_string=params)
+        response = client.get("http://localhost:3001/v1/storage/project/manifests", query_string=params, headers=request_headers)
 
         assert response.status_code == 200
 
     @pytest.mark.synapse_credentials_needed
-    def test_get_storage_projects(self, syn_token, client):
+    def test_get_storage_projects(self, request_headers, client):
 
         params = {
-        "access_token": syn_token,
         "asset_view": "syn23643253"
         }
 
-        response = client.get("http://localhost:3001/v1/storage/projects", query_string = params)
+        response = client.get("http://localhost:3001/v1/storage/projects", query_string = params, headers = request_headers)
 
         assert response.status_code == 200
 
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.parametrize("entity_id", ["syn34640850", "syn23643253", "syn24992754"])
-    def test_get_entity_type(self, syn_token, client, entity_id):
+    def test_get_entity_type(self, request_headers, client, entity_id):
         params = {
-            "access_token": syn_token,
             "asset_view": "syn23643253",
             "entity_id": entity_id
         }
-        response = client.get("http://localhost:3001/v1/storage/entity/type", query_string = params)
+        response = client.get("http://localhost:3001/v1/storage/entity/type", query_string = params, headers = request_headers)
 
         assert response.status_code == 200
         response_dt = json.loads(response.data)
@@ -212,13 +213,12 @@ def test_get_entity_type(self, syn_token, client, entity_id):
 
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.parametrize("entity_id", ["syn30988314", "syn27221721"])
-    def test_if_in_assetview(self, syn_token, client, entity_id):
+    def test_if_in_assetview(self, request_headers, client, entity_id):
         params = {
-            "access_token": syn_token,
             "asset_view": "syn23643253",
             "entity_id": entity_id
         }
-        response = client.get("http://localhost:3001/v1/storage/if_in_asset_view", query_string = params)        
+        response = client.get("http://localhost:3001/v1/storage/if_in_asset_view", query_string = params, headers = request_headers)        
         assert response.status_code == 200
         response_dt = json.loads(response.data)
 
@@ -411,7 +411,7 @@ def ifPandasDataframe(self, response_dt):
     #@pytest.mark.parametrize("output_format", [None, "excel", "google_sheet", "dataframe (only if getting existing manifests)"])
     @pytest.mark.parametrize("output_format", ["excel"])
     @pytest.mark.parametrize("data_type", ["Biospecimen", "Patient", "all manifests", ["Biospecimen", "Patient"]])
-    def test_generate_existing_manifest(self, client, data_model_jsonld, data_type, output_format, caplog):
+    def test_generate_existing_manifest(self, client, data_model_jsonld, data_type, output_format, caplog, request_headers):
         # set dataset
         if data_type == "Patient":
             dataset_id = ["syn51730545"] #Mock Patient Manifest folder on synapse
@@ -428,15 +428,18 @@ def test_generate_existing_manifest(self, client, data_model_jsonld, data_type,
             "title": "Example",
             "data_type": data_type,
             "use_annotations": False, 
-            "access_token": None
             }
+        
+        # Previous form of the test had `access_token` set to `None`
+        request_headers["Authorization"] = None
+
         if dataset_id: 
             params['dataset_id'] = dataset_id
         
         if output_format: 
             params['output_format'] = output_format
 
-        response = client.get('http://localhost:3001/v1/manifest/generate', query_string=params)
+        response = client.get('http://localhost:3001/v1/manifest/generate', query_string=params, headers=request_headers)
 
         assert response.status_code == 200
 
@@ -467,7 +470,7 @@ def test_generate_existing_manifest(self, client, data_model_jsonld, data_type,
     @pytest.mark.empty_token
     @pytest.mark.parametrize("output_format", ["excel", "google_sheet", "dataframe (only if getting existing manifests)", None])
     @pytest.mark.parametrize("data_type", ["all manifests", ["Biospecimen", "Patient"], "Patient"])
-    def test_generate_new_manifest(self, caplog, client, data_model_jsonld, data_type, output_format):
+    def test_generate_new_manifest(self, caplog, client, data_model_jsonld, data_type, output_format, request_headers):
         params = {
             "schema_url": data_model_jsonld,
             "asset_view": "syn23643253",
@@ -475,14 +478,16 @@ def test_generate_new_manifest(self, caplog, client, data_model_jsonld, data_typ
             "data_type": data_type,
             "use_annotations": False,
             "dataset_id": None,
-            "access_token": None
         }
 
+        # Previous form of the test had `access_token` set to `None`
+        request_headers["Authorization"] = None
+
         if output_format: 
             params["output_format"] = output_format
     
 
-        response = client.get('http://localhost:3001/v1/manifest/generate', query_string=params)
+        response = client.get('http://localhost:3001/v1/manifest/generate', query_string=params, headers=request_headers)
         assert response.status_code == 200
 
 
@@ -592,7 +597,7 @@ def test_populate_manifest(self, client, data_model_jsonld, test_manifest_csv):
 
     @pytest.mark.parametrize("restrict_rules", [False, True, None])
     @pytest.mark.parametrize("json_str", [None, '[{"Patient ID": 123, "Sex": "Female", "Year of Birth": "", "Diagnosis": "Healthy", "Component": "Patient", "Cancer Type": "Breast", "Family History": "Breast, Lung"}]'])
-    def test_validate_manifest(self, data_model_jsonld, client, json_str, restrict_rules, test_manifest_csv):
+    def test_validate_manifest(self, data_model_jsonld, client, json_str, restrict_rules, test_manifest_csv, request_headers):
 
         params = {
             "schema_url": data_model_jsonld,
@@ -609,13 +614,13 @@ def test_validate_manifest(self, data_model_jsonld, client, json_str, restrict_r
         else: 
             params["data_type"] = "MockComponent"
 
-            headers = {
+            request_headers.update({
             'Content-Type': "multipart/form-data",
             'Accept': "application/json"
-            }
+            })
 
             # test uploading a csv file
-            response_csv = client.post('http://localhost:3001/v1/model/validate', query_string=params, data={"file_name": (open(test_manifest_csv, 'rb'), "test.csv")}, headers=headers)
+            response_csv = client.post('http://localhost:3001/v1/model/validate', query_string=params, data={"file_name": (open(test_manifest_csv, 'rb'), "test.csv")}, headers=request_headers)
             response_dt = json.loads(response_csv.data)
             assert response_csv.status_code == 200
             
@@ -632,14 +637,13 @@ def test_validate_manifest(self, data_model_jsonld, client, json_str, restrict_r
         assert "warnings" in response_dt.keys()
 
     @pytest.mark.synapse_credentials_needed
-    def test_get_datatype_manifest(self, client, syn_token):
+    def test_get_datatype_manifest(self, client, request_headers):
         params = {
-            "access_token": syn_token,
             "asset_view": "syn23643253",
             "manifest_id": "syn27600110"
         }
 
-        response = client.get('http://localhost:3001/v1/get/datatype/manifest', query_string=params)  
+        response = client.get('http://localhost:3001/v1/get/datatype/manifest', query_string=params, headers=request_headers)  
 
         assert response.status_code == 200
         response_dt = json.loads(response.data)
@@ -658,16 +662,15 @@ def test_get_datatype_manifest(self, client, syn_token):
     @pytest.mark.parametrize("manifest_id, expected_component, expected_file_name", [("syn51078535", "BulkRNA-seqAssay", "synapse_storage_manifest.csv"), ("syn51156998", "Biospecimen", "synapse_storage_manifest_biospecimen.csv")])
     @pytest.mark.parametrize("new_manifest_name",[None,"Example.csv"]) 
     @pytest.mark.parametrize("as_json",[None,True,False]) 
-    def test_manifest_download(self, config: Configuration, client, syn_token, manifest_id, new_manifest_name, as_json, expected_component, expected_file_name):
+    def test_manifest_download(self, config: Configuration, client, request_headers, manifest_id, new_manifest_name, as_json, expected_component, expected_file_name):
         params = {
-            "access_token": syn_token,
             "manifest_id": manifest_id,
             "new_manifest_name": new_manifest_name, 
             "as_json": as_json
 
         }
 
-        response = client.get('http://localhost:3001/v1/manifest/download', query_string = params)
+        response = client.get('http://localhost:3001/v1/manifest/download', query_string = params, headers = request_headers)
         assert response.status_code == 200
 
         # if as_json is set to True or as_json is not defined, then a json gets returned
@@ -707,33 +710,31 @@ def test_manifest_download(self, config: Configuration, client, syn_token, manif
         except: 
             pass
 
-    @pytest.mark.synapse_credentials_needed        
+    @pytest.mark.synapse_credentials_needed
     # test downloading a manifest with access restriction and see if the correct error message got raised
-    def test_download_access_restricted_manifest(self, client, syn_token):
+    def test_download_access_restricted_manifest(self, client, request_headers):
         params = {
-            "access_token": syn_token,
             "manifest_id": "syn29862078"
         }  
 
-        response = client.get('http://localhost:3001/v1/manifest/download', query_string = params)
+        response = client.get('http://localhost:3001/v1/manifest/download', query_string = params, headers = request_headers)
         assert response.status_code == 500
         with pytest.raises(TypeError) as exc_info:
             raise TypeError('the type error got raised')
         assert exc_info.value.args[0] == "the type error got raised"
-
+    
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.parametrize("as_json", [None, True, False])
     @pytest.mark.parametrize("new_manifest_name", [None, "Test"])
-    def test_dataset_manifest_download(self, client, as_json, syn_token, new_manifest_name):
+    def test_dataset_manifest_download(self, client, as_json, request_headers, new_manifest_name):
         params = {
-            "access_token": syn_token,
             "asset_view": "syn28559058",
             "dataset_id": "syn28268700",
             "as_json": as_json,
             "new_manifest_name": new_manifest_name
         }
 
-        response = client.get('http://localhost:3001/v1/dataset/manifest/download', query_string = params)
+        response = client.get('http://localhost:3001/v1/dataset/manifest/download', query_string = params, headers = request_headers)
         assert response.status_code == 200
         response_dt = response.data
 
@@ -749,14 +750,13 @@ def test_dataset_manifest_download(self, client, as_json, syn_token, new_manifes
 
             assert isinstance(response_path, str)
             assert response_path.endswith(".csv")
-    
-    @pytest.mark.synapse_credentials_needed    
+
+    @pytest.mark.synapse_credentials_needed
     @pytest.mark.submission
-    def test_submit_manifest_table_and_file_replace(self, client, syn_token, data_model_jsonld, test_manifest_submit):
+    def test_submit_manifest_table_and_file_replace(self, client, request_headers, data_model_jsonld, test_manifest_submit):
         """Testing submit manifest in a csv format as a table and a file. Only replace the table
         """
         params = {
-            "access_token": syn_token,
             "schema_url": data_model_jsonld,
             "data_type": "Biospecimen",
             "restrict_rules": False, 
@@ -768,36 +768,56 @@ def test_submit_manifest_table_and_file_replace(self, client, syn_token, data_mo
             "use_schema_label": True
         }
 
-        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_manifest_submit, 'rb'), "test.csv")})
+        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_manifest_submit, 'rb'), "test.csv")}, headers=request_headers)
         assert response_csv.status_code == 200
 
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.submission
-    def test_submit_manifest_file_only_replace(self, client, syn_token, data_model_jsonld, test_manifest_submit):
+    @pytest.mark.parametrize("data_type, manifest_path_fixture",[("Biospecimen","test_manifest_submit"), ("MockComponent", "test_manifest_csv")])
+    def test_submit_manifest_file_only_replace(self, helpers, client, request_headers, data_model_jsonld, data_type, manifest_path_fixture, request):
         """Testing submit manifest in a csv format as a file
         """
         params = {
-            "access_token": syn_token,
             "schema_url": data_model_jsonld,
-            "data_type": "Biospecimen",
+            "data_type": data_type,
             "restrict_rules": False, 
             "manifest_record_type": "file_only",
-            "asset_view": "syn51514344",
-            "dataset_id": "syn51514345",
             "table_manipulation": 'replace',
             "use_schema_label": True
         }
-        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_manifest_submit, 'rb'), "test.csv")})
+
+        if data_type == "Biospecimen":
+            specific_params = {
+            "asset_view": "syn51514344",
+            "dataset_id": "syn51514345",
+            }
+
+        elif data_type == "MockComponent":
+            python_version = helpers.get_python_version()
+
+            if python_version == "3.10":
+                dataset_id = "syn52656106"
+            elif python_version =="3.9":
+                dataset_id = "syn52656104"
+
+            specific_params = {
+            "asset_view": "syn23643253",
+            "dataset_id": dataset_id
+            }
+
+        params.update(specific_params)
+
+        manifest_path = request.getfixturevalue(manifest_path_fixture)
+        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(manifest_path, 'rb'), "test.csv")}, headers=request_headers)
         assert response_csv.status_code == 200 
-    
+
     @pytest.mark.synapse_credentials_needed    
     @pytest.mark.submission
-    def test_submit_manifest_json_str_replace(self, client, syn_token, data_model_jsonld):
+    def test_submit_manifest_json_str_replace(self, client, request_headers, data_model_jsonld):
         """Submit json str as a file
         """
         json_str = '[{"Sample ID": 123, "Patient ID": 1,"Tissue Status": "Healthy","Component": "Biospecimen"}]'
         params = {
-            "access_token": syn_token,
             "schema_url": data_model_jsonld,
             "data_type": "Biospecimen",
             "json_str": json_str,
@@ -809,14 +829,13 @@ def test_submit_manifest_json_str_replace(self, client, syn_token, data_model_js
             "use_schema_label": True
         }
         params["json_str"] = json_str
-        response = client.post('http://localhost:3001/v1/model/submit', query_string = params, data={"file_name":''})
+        response = client.post('http://localhost:3001/v1/model/submit', query_string = params, data={"file_name":''}, headers = request_headers)
         assert response.status_code == 200
 
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.submission
-    def test_submit_manifest_w_file_and_entities(self, client, syn_token, data_model_jsonld, test_manifest_submit):
+    def test_submit_manifest_w_file_and_entities(self, client, request_headers, data_model_jsonld, test_manifest_submit):
         params = {
-            "access_token": syn_token,
             "schema_url": data_model_jsonld,
             "data_type": "Biospecimen",
             "restrict_rules": False, 
@@ -828,14 +847,13 @@ def test_submit_manifest_w_file_and_entities(self, client, syn_token, data_model
         }
 
         # test uploading a csv file
-        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_manifest_submit, 'rb'), "test.csv")})
+        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_manifest_submit, 'rb'), "test.csv")}, headers=request_headers)
         assert response_csv.status_code == 200
 
     @pytest.mark.synapse_credentials_needed
     @pytest.mark.submission
-    def test_submit_manifest_table_and_file_upsert(self, client, syn_token, data_model_jsonld, test_upsert_manifest_csv, ):
+    def test_submit_manifest_table_and_file_upsert(self, client, request_headers, data_model_jsonld, test_upsert_manifest_csv, ):
         params = {
-            "access_token": syn_token,
             "schema_url": data_model_jsonld,
             "data_type": "MockRDB",
             "restrict_rules": False, 
@@ -847,7 +865,7 @@ def test_submit_manifest_table_and_file_upsert(self, client, syn_token, data_mod
         }
 
         # test uploading a csv file
-        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_upsert_manifest_csv, 'rb'), "test.csv")},)            
+        response_csv = client.post('http://localhost:3001/v1/model/submit', query_string=params, data={"file_name": (open(test_upsert_manifest_csv, 'rb'), "test.csv")}, headers=request_headers)            
         assert response_csv.status_code == 200     
 
 @pytest.mark.schematic_api
diff --git a/tests/test_manifest.py b/tests/test_manifest.py
index 21f2f4285..0eb905cf1 100644
--- a/tests/test_manifest.py
+++ b/tests/test_manifest.py
@@ -87,13 +87,34 @@ def test_init(self, helpers):
         generator = ManifestGenerator(
             title="mock_title",
             path_to_json_ld=helpers.get_data_path("example.model.jsonld"),
+            root = "Patient"
         )
 
         assert type(generator.title) is str
         # assert generator.sheet_service == mock_creds["sheet_service"]
-        assert generator.root is None
+        assert generator.root is "Patient"
         assert type(generator.sg) is SchemaGenerator
 
+    @pytest.mark.parametrize("data_type, exc, exc_message",
+                              [("MissingComponent", LookupError, "could not be found in the data model schema"),
+                               (None, ValueError, "No DataType has been provided.")],
+                               ids = ["DataType not found in Schema", "No DataType provided"])
+    def test_missing_root_error(self, helpers, data_type, exc, exc_message):
+        """
+        Test for errors when either no DataType is provided or when a DataType is provided but not found in the schema
+        """
+
+        # A LookupError should be raised and include message when the component cannot be found
+        with pytest.raises(exc) as e:
+            generator = ManifestGenerator(
+            path_to_json_ld=helpers.get_data_path("example.model.jsonld"),
+            root=data_type,
+            use_annotations=False,
+            )        
+
+        # Check message contents
+        assert exc_message in str(e)
+
     @pytest.mark.google_credentials_needed
     def test_get_manifest_first_time(self, manifest):
 
@@ -145,7 +166,7 @@ def test_get_manifest_first_time(self, manifest):
         # An annotation merged with an attribute from the data model
         if use_annotations:
             assert output["File Format"].tolist() == ["txt", "csv", "fastq"]
-      
+
     @pytest.mark.parametrize("output_format", [None, "dataframe", "excel", "google_sheet"])
     @pytest.mark.parametrize("sheet_url", [None, True, False])
     @pytest.mark.parametrize("dataset_id", [None, "syn27600056"])
@@ -412,5 +433,3 @@ def test_populate_existing_excel_spreadsheet(self, simple_manifest_generator, si
         # remove file
         os.remove(dummy_output_path)
 
-
-
diff --git a/tests/test_store.py b/tests/test_store.py
index 0d2f0658b..8828d3fb6 100644
--- a/tests/test_store.py
+++ b/tests/test_store.py
@@ -65,7 +65,7 @@ def dataset_fileview_table_tidy(dataset_fileview, dataset_fileview_table):
 @pytest.fixture
 def version(synapse_store, helpers):
     
-    yield helpers.get_python_version(helpers)
+    yield helpers.get_python_version()
 
 @pytest.fixture
 def projectId(synapse_store, helpers):
@@ -75,7 +75,7 @@ def projectId(synapse_store, helpers):
 @pytest.fixture
 def datasetId(synapse_store, projectId, helpers):
     dataset = Folder(
-        name = 'Table Test  Dataset ' + helpers.get_python_version(helpers),
+        name = 'Table Test  Dataset ' + helpers.get_python_version(),
         parent = projectId,
         )
 
diff --git a/tests/test_validation.py b/tests/test_validation.py
index 22b64199b..c1f115e26 100644
--- a/tests/test_validation.py
+++ b/tests/test_validation.py
@@ -49,7 +49,8 @@ def test_valid_manifest(self,helpers,metadataModel):
 
         errors, warnings = metadataModel.validateModelManifest(
             manifestPath=manifestPath,
-            rootNode=rootNode
+            rootNode=rootNode,
+            project_scope = ["syn23643250"],
             )
             
         assert errors == []
@@ -62,7 +63,8 @@ def test_invalid_manifest(self,helpers,sg,metadataModel):
 
         errors, warnings = metadataModel.validateModelManifest(
             manifestPath=manifestPath,
-            rootNode=rootNode
+            rootNode=rootNode,
+            project_scope = ["syn23643250"],
             )
 
         #Check errors
@@ -247,6 +249,7 @@ def test_in_house_validation(self,helpers,sg,metadataModel):
             manifestPath=manifestPath,
             rootNode=rootNode,
             restrict_rules=True,
+            project_scope = ["syn23643250"],
             )  
 
         #Check errors