Repository: mechmotum/symbrim (language: python)

Issue:
Initial documenation
This PR sets up the online documentation for BRiM. The main goal of this PR is to have the API referencing set up online, such that possible problems with the documentation style in the docstrings are spot early on. There are still several things that should be done before merging this PR:
- [x] Make sure that the properties are also summarized.
- [x] Ensure that the init parameters of the classes are also displayed and explained. Pay special attention to `FlatGround` and `WhippleBicycle`.
- [x] Update the README a little. I'm not using the AutoAPI anymore, so can remove that great tutorial.
- [x] Setup CI for documentation
  - [x] Build test
  - [x] Auto deployment
- [ ] Fix build warnings and errors.
- [ ] Decide how to document class attributes, like `requirements`, and normal attributes like `lengths`.


Discussion / hints:
Currently just added all `special-members`, would be nice to refine this in the future. But this is fine for now.
Just reverted the deploy workflow, as that will crash due to the repo being private.
```
/home/runner/work/brim/brim/docs/_autosummary/brim.utilities.rst:29: WARNING: autosummary: failed to import brim.utilities.plotting.
Possible hints:
* ModuleNotFoundError: No module named 'brim.utilities.brim'
* AttributeError: module 'brim.utilities' has no attribute 'plotting'
* AttributeError: module 'brim.utilities' has no attribute 'brim'
* ModuleNotFoundError: No module named 'symmeplot'
* ImportError: 
/home/runner/work/brim/brim/src/brim/utilities/templates.py:docstring of brim.utilities.templates.MyModel:23: ERROR: Unexpected indentation.
/home/runner/work/brim/brim/src/brim/utilities/templates.py:docstring of brim.utilities.templates.MyModel:21: WARNING: Block quote ends without a blank line; unexpected unindent.
```
Not entirely sure about this error and warning. It is correct that it cannot import plotting, as `symmeplot` is optional and currently not being installed. This can be possibly fixed by also installing `symmeplot` in the workflow.

The unexpected indentation error is however something I'm clueless about. It looks fine in the browser, so I'm gonna ignore it for now.
> * Decide how to document class attributes, like `requirements`, and normal attributes like `lengths`.

While this is a good point. I'd just like to get this merged and continue.
The issue on importing installing symmeplot is also for another issue, because I noticed I need to modify the pyproject.toml for it first.

Fix patch:
diff --git a/poetry.lock b/poetry.lock
index bee846cc..d1ad5059 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -251,63 +251,63 @@ test-no-images = ["pytest"]
 
 [[package]]
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+version = "7.2.2"
 description = "Code coverage measurement for Python"
 category = "dev"
 optional = false
 python-versions = ">=3.7"
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+    {file = "coverage-7.2.2-pp37.pp38.pp39-none-any.whl", hash = "sha256:872d6ce1f5be73f05bea4df498c140b9e7ee5418bfa2cc8204e7f9b817caa968"},
+    {file = "coverage-7.2.2.tar.gz", hash = "sha256:36dd42da34fe94ed98c39887b86db9d06777b1c8f860520e21126a75507024f2"},
 ]
 
 [package.dependencies]
@@ -357,14 +357,14 @@ test = ["pytest (>=6)"]
 
 [[package]]
 name = "fonttools"
-version = "4.39.2"
+version = "4.39.3"
 description = "Tools to manipulate font files"
 category = "main"
 optional = true
 python-versions = ">=3.8"
 files = [
-    {file = "fonttools-4.39.2-py3-none-any.whl", hash = "sha256:85245aa2fd4cf502a643c9a9a2b5a393703e150a6eaacc3e0e84bb448053f061"},
-    {file = "fonttools-4.39.2.zip", hash = "sha256:e2d9f10337c9e3b17f9bce17a60a16a885a7d23b59b7f45ce07ea643e5580439"},
+    {file = "fonttools-4.39.3-py3-none-any.whl", hash = "sha256:64c0c05c337f826183637570ac5ab49ee220eec66cf50248e8df527edfa95aeb"},
+    {file = "fonttools-4.39.3.zip", hash = "sha256:9234b9f57b74e31b192c3fc32ef1a40750a8fbc1cd9837a7b7bfc4ca4a5c51d7"},
 ]
 
 [package.extras]
@@ -1345,7 +1345,7 @@ resolved_reference = "79478315408ea5ae115777619ec1bb50d8b8f3df"
 
 [[package]]
 name = "sympy"
-version = "1.13.dev0"
+version = "1.12.dev0"
 description = "Computer algebra system (CAS) in Python"
 category = "main"
 optional = false
@@ -1407,7 +1407,10 @@ files = [
 docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
 testing = ["big-O", "flake8 (<5)", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
 
+[extras]
+plotting = ["symmeplot"]
+
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.8"
-content-hash = "960d3e23b43d221c65dbf89eef52d9745afb72d9b48678734ff6d23703c0d78a"
+content-hash = "374c68d5fe06543668d84acdf20c5dc2cb6ac8510b69cd40c7ad482c7ec04a5a"
diff --git a/pyproject.toml b/pyproject.toml
index adcd9f6e..634320d8 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -21,12 +21,14 @@ coverage = {extras = ["toml"], version = "^7.2.1"}
 pytest-cov = "^4.0.0"
 numpy = "^1.24.2"
 
-
 [tool.poetry.group.docs.dependencies]
 sphinx = "^6.1.3"
 furo = "^2023.3.27"
 sphinxcontrib-bibtex = "^2.5.0"
 
+[tool.poetry.extras]
+plotting = ["symmeplot"]
+
 [build-system]
 requires = ["poetry-core"]
 build-backend = "poetry.core.masonry.api"


Test patch:
diff --git a/.github/workflows/tests.yaml b/.github/workflows/tests.yaml
index 65960d84..530fe61e 100644
--- a/.github/workflows/tests.yaml
+++ b/.github/workflows/tests.yaml
@@ -69,7 +69,7 @@ jobs:
         with:
           python-version: ${{ matrix.python-version }}
       - name: Install dependencies
-        run: poetry install --with docs
+        run: poetry install --with docs --extras plotting
       - name: make the sphinx docs
         run: |
           poetry run make -C docs clean