Repository: StochSS/SpatialPy (language: python)

Issue:
Fixed imports.



Discussion / hints:

Fix patch:
diff --git a/docs/build/html/.buildinfo b/docs/build/html/.buildinfo
index dc4f84da..6c634e76 100644
--- a/docs/build/html/.buildinfo
+++ b/docs/build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 594471ec9654e1c403c8655ed91ad300
+config: cda440a90b02806b8875d767ce4b3688
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/build/html/.doctrees/classes/spatialpy.core.doctree b/docs/build/html/.doctrees/classes/spatialpy.core.doctree
index dae0065f..8cb7bdee 100644
Binary files a/docs/build/html/.doctrees/classes/spatialpy.core.doctree and b/docs/build/html/.doctrees/classes/spatialpy.core.doctree differ
diff --git a/docs/build/html/.doctrees/classes/spatialpy.solvers.doctree b/docs/build/html/.doctrees/classes/spatialpy.solvers.doctree
index b386d5e5..d2592a4f 100644
Binary files a/docs/build/html/.doctrees/classes/spatialpy.solvers.doctree and b/docs/build/html/.doctrees/classes/spatialpy.solvers.doctree differ
diff --git a/docs/build/html/.doctrees/environment.pickle b/docs/build/html/.doctrees/environment.pickle
index 1aa7eed9..1f69f707 100644
Binary files a/docs/build/html/.doctrees/environment.pickle and b/docs/build/html/.doctrees/environment.pickle differ
diff --git a/docs/build/html/.doctrees/index.doctree b/docs/build/html/.doctrees/index.doctree
index 0a3adb78..1fdc4a36 100644
Binary files a/docs/build/html/.doctrees/index.doctree and b/docs/build/html/.doctrees/index.doctree differ
diff --git a/docs/build/html/_modules/index.html b/docs/build/html/_modules/index.html
index 9c669135..b04b064f 100644
--- a/docs/build/html/_modules/index.html
+++ b/docs/build/html/_modules/index.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Overview: module code &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>Overview: module code &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../_static/css/spatialpy_alabaster_customizations.css" />
@@ -127,7 +127,7 @@ <h1>All modules for which code is available</h1>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/boundarycondition.html b/docs/build/html/_modules/spatialpy/core/boundarycondition.html
index bc675ea7..4fad15e6 100644
--- a/docs/build/html/_modules/spatialpy/core/boundarycondition.html
+++ b/docs/build/html/_modules/spatialpy/core/boundarycondition.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.boundarycondition &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.boundarycondition &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.boundarycondition</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -276,7 +276,7 @@ <h1>Source code for spatialpy.core.boundarycondition</h1><div class="highlight">
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/cleanup.html b/docs/build/html/_modules/spatialpy/core/cleanup.html
index d8fd60e3..a3f03361 100644
--- a/docs/build/html/_modules/spatialpy/core/cleanup.html
+++ b/docs/build/html/_modules/spatialpy/core/cleanup.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.cleanup &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.cleanup &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.cleanup</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -196,7 +196,7 @@ <h1>Source code for spatialpy.core.cleanup</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/datafunction.html b/docs/build/html/_modules/spatialpy/core/datafunction.html
index c65ebee7..64c9b273 100644
--- a/docs/build/html/_modules/spatialpy/core/datafunction.html
+++ b/docs/build/html/_modules/spatialpy/core/datafunction.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.datafunction &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.datafunction &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.datafunction</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -156,7 +156,7 @@ <h1>Source code for spatialpy.core.datafunction</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/domain.html b/docs/build/html/_modules/spatialpy/core/domain.html
index 2a364a99..278397a4 100644
--- a/docs/build/html/_modules/spatialpy/core/domain.html
+++ b/docs/build/html/_modules/spatialpy/core/domain.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.domain &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.domain &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.domain</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -1384,7 +1384,7 @@ <h1>Source code for spatialpy.core.domain</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/geometry.html b/docs/build/html/_modules/spatialpy/core/geometry.html
index d64d1077..96ea1d49 100644
--- a/docs/build/html/_modules/spatialpy/core/geometry.html
+++ b/docs/build/html/_modules/spatialpy/core/geometry.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.geometry &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.geometry &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.geometry</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -257,7 +257,7 @@ <h1>Source code for spatialpy.core.geometry</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/initialcondition.html b/docs/build/html/_modules/spatialpy/core/initialcondition.html
index 70f31ba9..f35ac4f7 100644
--- a/docs/build/html/_modules/spatialpy/core/initialcondition.html
+++ b/docs/build/html/_modules/spatialpy/core/initialcondition.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.initialcondition &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.initialcondition &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.initialcondition</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -306,7 +306,7 @@ <h1>Source code for spatialpy.core.initialcondition</h1><div class="highlight"><
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/lattice.html b/docs/build/html/_modules/spatialpy/core/lattice.html
index 161cd49e..d3dbad14 100644
--- a/docs/build/html/_modules/spatialpy/core/lattice.html
+++ b/docs/build/html/_modules/spatialpy/core/lattice.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.lattice &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.lattice &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -283,7 +283,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span>
                 <span class="s2">&quot;geometry must be of type spatialpy.Geometry or spatialpy.CombinatoryGeometry.&quot;</span>
             <span class="p">)</span>
-        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="nb">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;transform must be a function.&quot;</span><span class="p">)</span>
 
         <span class="n">x_digits</span> <span class="o">=</span> <span class="nb">max</span><span class="p">(</span>
@@ -418,7 +418,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span>
                 <span class="s2">&quot;geometry must be of type spatialpy.Geometry or spatialpy.CombinatoryGeometry.&quot;</span>
             <span class="p">)</span>
-        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="nb">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;transform must be a function.&quot;</span><span class="p">)</span>
 
         <span class="n">digits</span> <span class="o">=</span> <span class="nb">max</span><span class="p">(</span>
@@ -559,7 +559,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span>
                 <span class="s2">&quot;geometry must be of type spatialpy.Geometry or spatialpy.CombinatoryGeometry.&quot;</span>
             <span class="p">)</span>
-        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="nb">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;transform must be a function.&quot;</span><span class="p">)</span>
 
         <span class="n">digits</span> <span class="o">=</span> <span class="nb">max</span><span class="p">(</span>
@@ -702,7 +702,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
         <span class="kn">from</span> <span class="nn">spatialpy.core.domain</span> <span class="kn">import</span> <span class="n">Domain</span> <span class="c1"># pylint: disable=import-outside-toplevel</span>
         <span class="k">if</span> <span class="ow">not</span> <span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">domain</span><span class="p">,</span> <span class="n">Domain</span><span class="p">)</span> <span class="ow">or</span> <span class="nb">type</span><span class="p">(</span><span class="n">domain</span><span class="p">)</span><span class="o">.</span><span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;Domain&#39;</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;domain must be of type spatialpy.Domain.&quot;</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="nb">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;transform must be a function.&quot;</span><span class="p">)</span>
 
         <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">subdomain_file</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
@@ -839,7 +839,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
         <span class="kn">from</span> <span class="nn">spatialpy.core.domain</span> <span class="kn">import</span> <span class="n">Domain</span> <span class="c1"># pylint: disable=import-outside-toplevel</span>
         <span class="k">if</span> <span class="ow">not</span> <span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">domain</span><span class="p">,</span> <span class="n">Domain</span><span class="p">)</span> <span class="ow">or</span> <span class="nb">type</span><span class="p">(</span><span class="n">domain</span><span class="p">)</span><span class="o">.</span><span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;Domain&#39;</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;domain must be of type spatialpy.Domain.&quot;</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="nb">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;transform must be a function.&quot;</span><span class="p">)</span>
 
         <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">mesh</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
@@ -950,7 +950,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
         <span class="kn">from</span> <span class="nn">spatialpy.core.domain</span> <span class="kn">import</span> <span class="n">Domain</span> <span class="c1"># pylint: disable=import-outside-toplevel</span>
         <span class="k">if</span> <span class="ow">not</span> <span class="p">(</span><span class="nb">isinstance</span><span class="p">(</span><span class="n">domain</span><span class="p">,</span> <span class="n">Domain</span><span class="p">)</span> <span class="ow">or</span> <span class="nb">type</span><span class="p">(</span><span class="n">domain</span><span class="p">)</span><span class="o">.</span><span class="vm">__name__</span> <span class="o">==</span> <span class="s1">&#39;Domain&#39;</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;domain must be of type spatialpy.Domain.&quot;</span><span class="p">)</span>
-        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
+        <span class="k">if</span> <span class="n">transform</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span> <span class="ow">and</span> <span class="ow">not</span> <span class="nb">callable</span><span class="p">(</span><span class="n">transform</span><span class="p">):</span>
             <span class="k">raise</span> <span class="n">LatticeError</span><span class="p">(</span><span class="s2">&quot;transform must be a function.&quot;</span><span class="p">)</span>
 
         <span class="k">try</span><span class="p">:</span>
@@ -1021,7 +1021,7 @@ <h1>Source code for spatialpy.core.lattice</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/model.html b/docs/build/html/_modules/spatialpy/core/model.html
index 882c2542..1e3add97 100644
--- a/docs/build/html/_modules/spatialpy/core/model.html
+++ b/docs/build/html/_modules/spatialpy/core/model.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.model &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.model &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.model</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -1165,7 +1165,7 @@ <h1>Source code for spatialpy.core.model</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/parameter.html b/docs/build/html/_modules/spatialpy/core/parameter.html
index 4aade43e..c9018ea6 100644
--- a/docs/build/html/_modules/spatialpy/core/parameter.html
+++ b/docs/build/html/_modules/spatialpy/core/parameter.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.parameter &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.parameter &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.parameter</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -218,7 +218,7 @@ <h1>Source code for spatialpy.core.parameter</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/reaction.html b/docs/build/html/_modules/spatialpy/core/reaction.html
index 4a25fca3..73fc14e9 100644
--- a/docs/build/html/_modules/spatialpy/core/reaction.html
+++ b/docs/build/html/_modules/spatialpy/core/reaction.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.reaction &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.reaction &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.reaction</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -801,7 +801,7 @@ <h1>Source code for spatialpy.core.reaction</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/result.html b/docs/build/html/_modules/spatialpy/core/result.html
index 6832503e..297a92e8 100644
--- a/docs/build/html/_modules/spatialpy/core/result.html
+++ b/docs/build/html/_modules/spatialpy/core/result.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.result &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.result &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.result</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -251,6 +251,19 @@ <h1>Source code for spatialpy.core.result</h1><div class="highlight"><pre>
         <span class="bp">self</span><span class="o">.</span><span class="n">timeout</span> <span class="o">=</span> <span class="kc">False</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">official_vtk</span> <span class="o">=</span> <span class="kc">False</span>
         <span class="bp">self</span><span class="o">.</span><span class="n">result_dir</span> <span class="o">=</span> <span class="n">result_dir</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listOfResultObjects</span> <span class="o">=</span> <span class="p">[</span><span class="bp">self</span><span class="p">]</span>
+
+    <span class="k">def</span> <span class="fm">__len__</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
+        <span class="k">return</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">listOfResultObjects</span><span class="p">)</span>
+
+    <span class="k">def</span> <span class="fm">__getitem__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">index</span><span class="p">):</span>
+        <span class="k">return</span> <span class="bp">self</span><span class="o">.</span><span class="n">listOfResultObjects</span><span class="p">[</span><span class="n">index</span><span class="p">]</span>
+
+    <span class="k">def</span> <span class="fm">__setitem__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">index</span><span class="p">,</span> <span class="n">item</span><span class="p">):</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listOfResultObjects</span><span class="p">[</span><span class="n">index</span><span class="p">]</span> <span class="o">=</span> <span class="n">item</span>
+
+<div class="viewcode-block" id="Result.append"><a class="viewcode-back" href="../../../classes/spatialpy.core.html#spatialpy.core.result.Result.append">[docs]</a>    <span class="k">def</span> <span class="nf">append</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">item</span><span class="p">):</span>
+        <span class="bp">self</span><span class="o">.</span><span class="n">listOfResultObjects</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">item</span><span class="p">)</span></div>
 
     <span class="k">def</span> <span class="fm">__eq__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">other</span><span class="p">):</span>
         <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">other</span><span class="p">,</span> <span class="n">Result</span><span class="p">)</span> <span class="ow">and</span> <span class="bp">self</span><span class="o">.</span><span class="n">result_dir</span> <span class="ow">and</span> <span class="n">other</span><span class="o">.</span><span class="n">result_dir</span><span class="p">:</span>
@@ -1040,7 +1053,7 @@ <h1>Source code for spatialpy.core.result</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/spatialpyerror.html b/docs/build/html/_modules/spatialpy/core/spatialpyerror.html
index d62ea223..d7888d46 100644
--- a/docs/build/html/_modules/spatialpy/core/spatialpyerror.html
+++ b/docs/build/html/_modules/spatialpy/core/spatialpyerror.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.spatialpyerror &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.spatialpyerror &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.spatialpyerror</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -227,7 +227,7 @@ <h1>Source code for spatialpy.core.spatialpyerror</h1><div class="highlight"><pr
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/species.html b/docs/build/html/_modules/spatialpy/core/species.html
index 6eea1e88..a83054c2 100644
--- a/docs/build/html/_modules/spatialpy/core/species.html
+++ b/docs/build/html/_modules/spatialpy/core/species.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.species &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.species &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.species</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -216,7 +216,7 @@ <h1>Source code for spatialpy.core.species</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/timespan.html b/docs/build/html/_modules/spatialpy/core/timespan.html
index db6e605c..dd37b3da 100644
--- a/docs/build/html/_modules/spatialpy/core/timespan.html
+++ b/docs/build/html/_modules/spatialpy/core/timespan.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.timespan &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.timespan &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.timespan</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -321,7 +321,7 @@ <h1>Source code for spatialpy.core.timespan</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/transformation.html b/docs/build/html/_modules/spatialpy/core/transformation.html
index 4f78b755..8310a0cc 100644
--- a/docs/build/html/_modules/spatialpy/core/transformation.html
+++ b/docs/build/html/_modules/spatialpy/core/transformation.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.transformation &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.transformation &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.transformation</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -680,7 +680,7 @@ <h1>Source code for spatialpy.core.transformation</h1><div class="highlight"><pr
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/visualization.html b/docs/build/html/_modules/spatialpy/core/visualization.html
index 2193160c..1ae4582d 100644
--- a/docs/build/html/_modules/spatialpy/core/visualization.html
+++ b/docs/build/html/_modules/spatialpy/core/visualization.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.visualization &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.visualization &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.visualization</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -293,7 +293,7 @@ <h1>Source code for spatialpy.core.visualization</h1><div class="highlight"><pre
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/core/vtkreader.html b/docs/build/html/_modules/spatialpy/core/vtkreader.html
index 04eb2a7d..57931a8b 100644
--- a/docs/build/html/_modules/spatialpy/core/vtkreader.html
+++ b/docs/build/html/_modules/spatialpy/core/vtkreader.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.core.vtkreader &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core.vtkreader &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.core.vtkreader</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -303,7 +303,7 @@ <h1>Source code for spatialpy.core.vtkreader</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/solvers/build_expression.html b/docs/build/html/_modules/spatialpy/solvers/build_expression.html
index de6ae2a5..caa71dcf 100644
--- a/docs/build/html/_modules/spatialpy/solvers/build_expression.html
+++ b/docs/build/html/_modules/spatialpy/solvers/build_expression.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.solvers.build_expression &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.solvers.build_expression &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.solvers.build_expression</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -862,7 +862,7 @@ <h1>Source code for spatialpy.solvers.build_expression</h1><div class="highlight
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/solvers/solver.html b/docs/build/html/_modules/spatialpy/solvers/solver.html
index ad44471a..42501e6c 100644
--- a/docs/build/html/_modules/spatialpy/solvers/solver.html
+++ b/docs/build/html/_modules/spatialpy/solvers/solver.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.solvers.solver &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.solvers.solver &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.solvers.solver</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -122,7 +122,7 @@ <h1>Source code for spatialpy.solvers.solver</h1><div class="highlight"><pre>
 
 <span class="kn">import</span> <span class="nn">numpy</span>
 
-<span class="kn">from</span> <span class="nn">spatialpy.core.spatialpyerror</span> <span class="kn">import</span> <span class="n">ModelError</span><span class="p">,</span> <span class="n">SimulationError</span><span class="p">,</span> <span class="n">SimulationTimeout</span>
+<span class="kn">from</span> <span class="nn">spatialpy.core.spatialpyerror</span> <span class="kn">import</span> <span class="n">ModelError</span><span class="p">,</span> <span class="n">SimulationError</span>
 
 <span class="k">def</span> <span class="nf">_read_from_stdout</span><span class="p">(</span><span class="n">stdout</span> <span class="p">,</span><span class="n">verbose</span><span class="o">=</span><span class="kc">True</span><span class="p">):</span>
     <span class="k">try</span><span class="p">:</span>
@@ -629,14 +629,11 @@ <h1>Source code for spatialpy.solvers.solver</h1><div class="highlight"><pre>
 <span class="sd">        :type verbose: bool</span>
 
 <span class="sd">        :returns: A SpatialPy Result object containing spatial and time series data from simulation.</span>
-<span class="sd">        :rtype: spatialpy.Result.Result | list(spatialpy.Result.Result)</span>
+<span class="sd">        :rtype: spatialpy.Result.Result </span>
 
-<span class="sd">        :raises SimulationTimeout: Simulation exceeded timeout.</span>
 <span class="sd">        :raises SimulationError: Simulation execution failed.</span>
 <span class="sd">        &quot;&quot;&quot;</span>
         <span class="kn">from</span> <span class="nn">spatialpy.core.result</span> <span class="kn">import</span> <span class="n">Result</span> <span class="c1"># pylint: disable=import-outside-toplevel</span>
-        <span class="k">if</span> <span class="n">number_of_trajectories</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
-            <span class="n">result_list</span> <span class="o">=</span> <span class="p">[]</span>
         <span class="c1"># Check if compiled, call compile() if not.</span>
         <span class="k">if</span> <span class="ow">not</span> <span class="bp">self</span><span class="o">.</span><span class="n">is_compiled</span><span class="p">:</span>
             <span class="bp">self</span><span class="o">.</span><span class="n">compile</span><span class="p">(</span><span class="n">debug</span><span class="o">=</span><span class="n">debug</span><span class="p">,</span> <span class="n">profile</span><span class="o">=</span><span class="n">profile</span><span class="p">)</span>
@@ -682,7 +679,7 @@ <h1>Source code for spatialpy.solvers.solver</h1><div class="highlight"><pre>
                         <span class="n">result</span><span class="o">.</span><span class="n">timeout</span> <span class="o">=</span> <span class="kc">True</span>
                         <span class="c1"># send signal to the process group</span>
                         <span class="n">os</span><span class="o">.</span><span class="n">killpg</span><span class="p">(</span><span class="n">process</span><span class="o">.</span><span class="n">pid</span><span class="p">,</span> <span class="n">signal</span><span class="o">.</span><span class="n">SIGINT</span><span class="p">)</span>
-                        <span class="k">raise</span> <span class="n">SimulationTimeout</span><span class="p">(</span><span class="s2">&quot;SpatialPy solver timeout exceded.&quot;</span><span class="p">)</span> <span class="kn">from</span> <span class="nn">err</span>
+
             <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">err</span><span class="p">:</span>
                 <span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">&quot;Error, execution of solver raised an exception: </span><span class="si">{</span><span class="n">err</span><span class="si">}</span><span class="s2">&quot;</span><span class="p">)</span>
                 <span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">&quot;cmd = </span><span class="si">{</span><span class="n">solver_cmd</span><span class="si">}</span><span class="s2">&quot;</span><span class="p">)</span>
@@ -697,12 +694,12 @@ <h1>Source code for spatialpy.solvers.solver</h1><div class="highlight"><pre>
             <span class="n">result</span><span class="o">.</span><span class="n">success</span> <span class="o">=</span> <span class="kc">True</span>
             <span class="k">if</span> <span class="n">profile</span><span class="p">:</span>
                 <span class="bp">self</span><span class="o">.</span><span class="n">__read_profile_info</span><span class="p">(</span><span class="n">result</span><span class="p">)</span>
-            <span class="k">if</span> <span class="n">number_of_trajectories</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
-                <span class="n">result_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">result</span><span class="p">)</span>
-            <span class="k">else</span><span class="p">:</span>
-                <span class="k">return</span> <span class="n">result</span>
+            <span class="k">if</span> <span class="n">run_ndx</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>                
+                <span class="n">first_result</span> <span class="o">=</span> <span class="n">result</span>
+            <span class="k">elif</span> <span class="n">number_of_trajectories</span> <span class="o">&gt;</span> <span class="mi">1</span><span class="p">:</span>
+                <span class="n">first_result</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">result</span><span class="p">)</span>
 
-        <span class="k">return</span> <span class="n">result_list</span></div></div>
+        <span class="k">return</span> <span class="n">first_result</span></div></div>
 </pre></div>
 
           </div>
@@ -719,7 +716,7 @@ <h1>Source code for spatialpy.solvers.solver</h1><div class="highlight"><pre>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_modules/spatialpy/stochss/stochss_export.html b/docs/build/html/_modules/spatialpy/stochss/stochss_export.html
index dcd1f29f..66d99b1d 100644
--- a/docs/build/html/_modules/spatialpy/stochss/stochss_export.html
+++ b/docs/build/html/_modules/spatialpy/stochss/stochss_export.html
@@ -5,7 +5,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>spatialpy.stochss.stochss_export &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.stochss.stochss_export &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../../../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../../../_static/css/spatialpy_alabaster_customizations.css" />
@@ -95,7 +95,7 @@ <h3 id="searchlabel">Quick search</h3>
   <h1>Source code for spatialpy.stochss.stochss_export</h1><div class="highlight"><pre>
 <span></span><span class="c1"># SpatialPy is a Python 3 package for simulation of</span>
 <span class="c1"># spatial deterministic/stochastic reaction-diffusion-advection problems</span>
-<span class="c1"># Copyright (C) 2019 - 2022 SpatialPy developers.</span>
+<span class="c1"># Copyright (C) 2019 - 2023 SpatialPy developers.</span>
 
 <span class="c1"># This program is free software: you can redistribute it and/or modify</span>
 <span class="c1"># it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as</span>
@@ -365,7 +365,7 @@ <h1>Source code for spatialpy.stochss.stochss_export</h1><div class="highlight">
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/_static/documentation_options.js b/docs/build/html/_static/documentation_options.js
index bc8fab3c..64ff561e 100644
--- a/docs/build/html/_static/documentation_options.js
+++ b/docs/build/html/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '1.2.1',
+    VERSION: '1.2.2',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',
diff --git a/docs/build/html/classes/spatialpy.core.html b/docs/build/html/classes/spatialpy.core.html
index 4bedebc7..9c2b16d3 100644
--- a/docs/build/html/classes/spatialpy.core.html
+++ b/docs/build/html/classes/spatialpy.core.html
@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.19: https://docutils.sourceforge.io/" />
 
-    <title>spatialpy.core package &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.core package &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../_static/css/spatialpy_alabaster_customizations.css" />
@@ -2319,6 +2319,11 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">spatialpy.core.result.</span></span><span class="sig-name descname"><span class="pre">Result</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">model</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">result_dir</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/spatialpy/core/result.html#Result"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#spatialpy.core.result.Result" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></p>
 <p>Result object for a URDME simulation.</p>
+<dl class="py method">
+<dt class="sig sig-object py" id="spatialpy.core.result.Result.append">
+<span class="sig-name descname"><span class="pre">append</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">item</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/spatialpy/core/result.html#Result.append"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#spatialpy.core.result.Result.append" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
 <dl class="py method">
 <dt class="sig sig-object py" id="spatialpy.core.result.Result.export_to_csv">
 <span class="sig-name descname"><span class="pre">export_to_csv</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">folder_name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/spatialpy/core/result.html#Result.export_to_csv"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#spatialpy.core.result.Result.export_to_csv" title="Permalink to this definition">¶</a></dt>
@@ -5354,6 +5359,11 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">spatialpy.core.</span></span><span class="sig-name descname"><span class="pre">Result</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">model</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">result_dir</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/spatialpy/core/result.html#Result"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#spatialpy.core.Result" title="Permalink to this definition">¶</a></dt>
 <dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">object</span></code></p>
 <p>Result object for a URDME simulation.</p>
+<dl class="py method">
+<dt class="sig sig-object py" id="spatialpy.core.Result.append">
+<span class="sig-name descname"><span class="pre">append</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">item</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/spatialpy/core/result.html#Result.append"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#spatialpy.core.Result.append" title="Permalink to this definition">¶</a></dt>
+<dd></dd></dl>
+
 <dl class="py method">
 <dt class="sig sig-object py" id="spatialpy.core.Result.export_to_csv">
 <span class="sig-name descname"><span class="pre">export_to_csv</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">folder_name</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/spatialpy/core/result.html#Result.export_to_csv"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#spatialpy.core.Result.export_to_csv" title="Permalink to this definition">¶</a></dt>
@@ -6471,7 +6481,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/classes/spatialpy.html b/docs/build/html/classes/spatialpy.html
index 8bd4fed3..ec0794c1 100644
--- a/docs/build/html/classes/spatialpy.html
+++ b/docs/build/html/classes/spatialpy.html
@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.19: https://docutils.sourceforge.io/" />
 
-    <title>spatialpy package &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy package &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../_static/css/spatialpy_alabaster_customizations.css" />
@@ -19,7 +19,7 @@
     <link rel="index" title="Index" href="../genindex.html" />
     <link rel="search" title="Search" href="../search.html" />
     <link rel="next" title="spatialpy.core package" href="spatialpy.core.html" />
-    <link rel="prev" title="Documentation for SpatialPy 1.2.1" href="../index.html" />
+    <link rel="prev" title="Documentation for SpatialPy 1.2.2" href="../index.html" />
    
   <link rel="stylesheet" href="../_static/custom.css" type="text/css" />
   
@@ -73,7 +73,7 @@ <h3>Navigation</h3>
 <h3>Related Topics</h3>
 <ul>
   <li><a href="../index.html">Documentation overview</a><ul>
-      <li>Previous: <a href="../index.html" title="previous chapter">Documentation for SpatialPy 1.2.1</a></li>
+      <li>Previous: <a href="../index.html" title="previous chapter">Documentation for SpatialPy 1.2.2</a></li>
       <li>Next: <a href="spatialpy.core.html" title="next chapter">spatialpy.core package</a></li>
   </ul></li>
 </ul>
@@ -328,6 +328,7 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </li>
 <li class="toctree-l2"><a class="reference internal" href="spatialpy.core.html#module-spatialpy.core.result">spatialpy.core.result module</a><ul>
 <li class="toctree-l3"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.result.Result"><code class="docutils literal notranslate"><span class="pre">Result</span></code></a><ul>
+<li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.result.Result.append"><code class="docutils literal notranslate"><span class="pre">Result.append()</span></code></a></li>
 <li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.result.Result.export_to_csv"><code class="docutils literal notranslate"><span class="pre">Result.export_to_csv()</span></code></a></li>
 <li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.result.Result.get_property"><code class="docutils literal notranslate"><span class="pre">Result.get_property()</span></code></a></li>
 <li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.result.Result.get_species"><code class="docutils literal notranslate"><span class="pre">Result.get_species()</span></code></a></li>
@@ -600,6 +601,7 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
 </ul>
 </li>
 <li class="toctree-l3"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.Result"><code class="docutils literal notranslate"><span class="pre">Result</span></code></a><ul>
+<li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.Result.append"><code class="docutils literal notranslate"><span class="pre">Result.append()</span></code></a></li>
 <li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.Result.export_to_csv"><code class="docutils literal notranslate"><span class="pre">Result.export_to_csv()</span></code></a></li>
 <li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.Result.get_property"><code class="docutils literal notranslate"><span class="pre">Result.get_property()</span></code></a></li>
 <li class="toctree-l4"><a class="reference internal" href="spatialpy.core.html#spatialpy.core.Result.get_species"><code class="docutils literal notranslate"><span class="pre">Result.get_species()</span></code></a></li>
@@ -800,7 +802,7 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
     <ul>
         <li>
           &larr;
-          <a href="../index.html" title="Previous document">Documentation for SpatialPy 1.2.1</a>
+          <a href="../index.html" title="Previous document">Documentation for SpatialPy 1.2.2</a>
         </li>
         <li>
           <a href="spatialpy.core.html" title="Next document">spatialpy.core package</a>
@@ -815,7 +817,7 @@ <h2>Subpackages<a class="headerlink" href="#subpackages" title="Permalink to thi
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/classes/spatialpy.solvers.html b/docs/build/html/classes/spatialpy.solvers.html
index 33ed9495..2669b67e 100644
--- a/docs/build/html/classes/spatialpy.solvers.html
+++ b/docs/build/html/classes/spatialpy.solvers.html
@@ -6,7 +6,7 @@
     <meta charset="utf-8" />
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-    <title>spatialpy.solvers package &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.solvers package &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="../_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="../_static/alabaster.css" />
     <link rel="stylesheet" type="text/css" href="../_static/css/spatialpy_alabaster_customizations.css" />
@@ -912,13 +912,10 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 <dd class="field-even"><p>A SpatialPy Result object containing spatial and time series data from simulation.</p>
 </dd>
 <dt class="field-odd">Return type<span class="colon">:</span></dt>
-<dd class="field-odd"><p>spatialpy.Result.Result | list(spatialpy.Result.Result)</p>
+<dd class="field-odd"><p>spatialpy.Result.Result</p>
 </dd>
 <dt class="field-even">Raises<span class="colon">:</span></dt>
-<dd class="field-even"><ul class="simple">
-<li><p><a class="reference internal" href="spatialpy.core.html#spatialpy.core.spatialpyerror.SimulationTimeout" title="spatialpy.core.spatialpyerror.SimulationTimeout"><strong>SimulationTimeout</strong></a> – Simulation exceeded timeout.</p></li>
-<li><p><a class="reference internal" href="spatialpy.core.html#spatialpy.core.spatialpyerror.SimulationError" title="spatialpy.core.spatialpyerror.SimulationError"><strong>SimulationError</strong></a> – Simulation execution failed.</p></li>
-</ul>
+<dd class="field-even"><p><a class="reference internal" href="spatialpy.core.html#spatialpy.core.spatialpyerror.SimulationError" title="spatialpy.core.spatialpyerror.SimulationError"><strong>SimulationError</strong></a> – Simulation execution failed.</p>
 </dd>
 </dl>
 </dd></dl>
@@ -954,7 +951,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/classes/spatialpy.stochss.html b/docs/build/html/classes/spatialpy.stochss.html
index 939050f6..d5ac440d 100644
--- a/docs/build/html/classes/spatialpy.stochss.html
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-    <title>spatialpy.stochss package &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>spatialpy.stochss package &#8212; SpatialPy 1.2.2 documentation</title>
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@@ -157,7 +157,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
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diff --git a/docs/build/html/genindex.html b/docs/build/html/genindex.html
index 79a9e758..bf239fcc 100644
--- a/docs/build/html/genindex.html
+++ b/docs/build/html/genindex.html
@@ -5,7 +5,7 @@
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     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Index &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>Index &#8212; SpatialPy 1.2.2 documentation</title>
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@@ -208,6 +208,14 @@ <h2 id="A">A</h2>
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 </li>
       </ul></li>
+      <li><a href="classes/spatialpy.core.html#spatialpy.core.Result.append">append() (spatialpy.core.Result method)</a>
+
+      <ul>
+        <li><a href="classes/spatialpy.core.html#spatialpy.core.result.Result.append">(spatialpy.core.result.Result method)</a>
+</li>
+      </ul></li>
+  </ul></td>
+  <td style="width: 33%; vertical-align: top;"><ul>
       <li><a href="classes/spatialpy.core.html#spatialpy.core.CartesianLattice.apply">apply() (spatialpy.core.CartesianLattice method)</a>
 
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@@ -256,8 +264,6 @@ <h2 id="A">A</h2>
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 </li>
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-  </ul></td>
-  <td style="width: 33%; vertical-align: top;"><ul>
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@@ -1710,7 +1716,7 @@ <h2 id="X">X</h2>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
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diff --git a/docs/build/html/index.html b/docs/build/html/index.html
index 35beb6be..2b7779d3 100644
--- a/docs/build/html/index.html
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@@ -6,7 +6,7 @@
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-    <title>Documentation for SpatialPy 1.2.1 &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>Documentation for SpatialPy 1.2.2 &#8212; SpatialPy 1.2.2 documentation</title>
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@@ -94,7 +94,7 @@ <h3 id="searchlabel">Quick search</h3>
           <div class="body" role="main">
             
   <section id="documentation-for-spatialpy-release">
-<h1>Documentation for SpatialPy 1.2.1<a class="headerlink" href="#documentation-for-spatialpy-release" title="Permalink to this heading">¶</a></h1>
+<h1>Documentation for SpatialPy 1.2.2<a class="headerlink" href="#documentation-for-spatialpy-release" title="Permalink to this heading">¶</a></h1>
 <p>SpatialPy is a Python 3 package for simulation of spatial deterministic/stochastic reaction-diffusion-advection problems embedded in Lagrangian reference frame particle based fluid dynamics domain</p>
 <p>This package is intended to replace the PyURDME software <a class="reference external" href="https://github.com/pyurdme/pyurdme">https://github.com/pyurdme/pyurdme</a> and will feature both a NSM solver for RDME simulation on static domains and a sSSA-SDPD particle based fluid dynamics solver as described in the publication “A hybrid smoothed dissipative particle dynamics (SDPD) spatial stochastic simulation algorithm (sSSA) for advection–diffusion–reaction problems” by Drawert, Jacob, Li, Yi, Petzold <a class="reference external" href="https://www.sciencedirect.com/science/article/pii/S0021999118307101">https://www.sciencedirect.com/science/article/pii/S0021999118307101</a></p>
 <section id="getting-a-copy-of-spatialpy">
@@ -156,7 +156,7 @@ <h1>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Pe
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 5.3.0</a>
diff --git a/docs/build/html/objects.inv b/docs/build/html/objects.inv
index b4acc45d..a2827e8f 100644
Binary files a/docs/build/html/objects.inv and b/docs/build/html/objects.inv differ
diff --git a/docs/build/html/py-modindex.html b/docs/build/html/py-modindex.html
index 35205203..5bbe957f 100644
--- a/docs/build/html/py-modindex.html
+++ b/docs/build/html/py-modindex.html
@@ -5,7 +5,7 @@
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     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Python Module Index &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>Python Module Index &#8212; SpatialPy 1.2.2 documentation</title>
     <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
     <link rel="stylesheet" type="text/css" href="_static/alabaster.css" />
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@@ -242,7 +242,7 @@ <h1>Python Module Index</h1>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
       |
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diff --git a/docs/build/html/search.html b/docs/build/html/search.html
index 8a281b08..f923a57f 100644
--- a/docs/build/html/search.html
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@@ -5,7 +5,7 @@
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     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Search &#8212; SpatialPy 1.2.1 documentation</title>
+    <title>Search &#8212; SpatialPy 1.2.2 documentation</title>
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@@ -131,7 +131,7 @@ <h1 id="search-documentation">Search</h1>
     <div class="clearer"></div>
   </div>
     <div class="footer">
-      &copy;Copyright (C) 2019-2022.
+      &copy;Copyright (C) 2019-2023.
       
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diff --git a/docs/build/html/searchindex.js b/docs/build/html/searchindex.js
index a94d8000..3e6346b5 100644
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"buildexpression.validationvisitor (class in spatialpy.solvers.build_expression)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor"]], "cppconverter (class in spatialpy.solvers.build_expression)": [[2, "spatialpy.solvers.build_expression.CppConverter"]], "cppconverter.cppexpressiontransformer (class in spatialpy.solvers.build_expression)": [[2, "spatialpy.solvers.build_expression.CppConverter.CppExpressionTransformer"]], "expressionconverter (class in spatialpy.solvers.build_expression)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter"]], "expressionresults (class in spatialpy.solvers.build_expression)": [[2, "spatialpy.solvers.build_expression.ExpressionResults"]], "pythonconverter (class in spatialpy.solvers.build_expression)": [[2, "spatialpy.solvers.build_expression.PythonConverter"]], "solver (class in spatialpy.solvers.solver)": [[2, "spatialpy.solvers.solver.Solver"]], "compile() (spatialpy.solvers.solver.solver method)": [[2, "spatialpy.solvers.solver.Solver.compile"]], "convert_str() (spatialpy.solvers.build_expression.expressionconverter class method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.convert_str"]], "get_str() (spatialpy.solvers.build_expression.cppconverter method)": [[2, "spatialpy.solvers.build_expression.CppConverter.get_str"]], "get_str() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.get_str"]], "getexpr_cpp() (spatialpy.solvers.build_expression.buildexpression method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.getexpr_cpp"]], "getexpr_python() (spatialpy.solvers.build_expression.buildexpression method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.getexpr_python"]], "map_operator() (spatialpy.solvers.build_expression.buildexpression class method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.map_operator"]], "operator_map (spatialpy.solvers.build_expression.buildexpression attribute)": [[2, "spatialpy.solvers.build_expression.BuildExpression.operator_map"]], "parse_comparison() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.parse_comparison"]], "parse_logical() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.parse_logical"]], "parse_operator() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.parse_operator"]], "run() (spatialpy.solvers.solver.solver method)": [[2, "spatialpy.solvers.solver.Solver.run"]], "spatialpy.solvers": [[2, "module-spatialpy.solvers"]], "spatialpy.solvers.build_expression": [[2, "module-spatialpy.solvers.build_expression"]], "spatialpy.solvers.solver": [[2, "module-spatialpy.solvers.solver"]], "validate() (spatialpy.solvers.build_expression.buildexpression method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.validate"]], "visit_add() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Add"]], "visit_and() (spatialpy.solvers.build_expression.cppconverter method)": [[2, "spatialpy.solvers.build_expression.CppConverter.visit_And"]], "visit_and() (spatialpy.solvers.build_expression.pythonconverter method)": [[2, "spatialpy.solvers.build_expression.PythonConverter.visit_And"]], "visit_assign() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_Assign"]], "visit_binop() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_BinOp"]], "visit_binop() (spatialpy.solvers.build_expression.cppconverter.cppexpressiontransformer method)": [[2, "spatialpy.solvers.build_expression.CppConverter.CppExpressionTransformer.visit_BinOp"]], "visit_binop() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_BinOp"]], "visit_boolop() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_BoolOp"]], "visit_boolop() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_BoolOp"]], "visit_bytes() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Bytes"]], "visit_call() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_Call"]], "visit_call() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Call"]], "visit_compare() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_Compare"]], "visit_compare() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Compare"]], "visit_constant() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Constant"]], "visit_div() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Div"]], "visit_ellipsis() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Ellipsis"]], "visit_eq() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Eq"]], "visit_gt() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Gt"]], "visit_gte() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_GtE"]], "visit_lt() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Lt"]], "visit_lte() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_LtE"]], "visit_mult() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Mult"]], "visit_name() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_Name"]], "visit_name() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Name"]], "visit_nameconstant() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_NameConstant"]], "visit_noteq() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_NotEq"]], "visit_num() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Num"]], "visit_or() (spatialpy.solvers.build_expression.cppconverter method)": [[2, "spatialpy.solvers.build_expression.CppConverter.visit_Or"]], "visit_or() (spatialpy.solvers.build_expression.pythonconverter method)": [[2, "spatialpy.solvers.build_expression.PythonConverter.visit_Or"]], "visit_pow() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Pow"]], "visit_str() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Str"]], "visit_sub() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_Sub"]], "visit_usub() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_USub"]], "visit_unaryop() (spatialpy.solvers.build_expression.buildexpression.validationvisitor method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.ValidationVisitor.visit_UnaryOp"]], "visit_unaryop() (spatialpy.solvers.build_expression.expressionconverter method)": [[2, "spatialpy.solvers.build_expression.ExpressionConverter.visit_UnaryOp"]], "with_blacklist() (spatialpy.solvers.build_expression.buildexpression method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.with_blacklist"]], "with_namespace() (spatialpy.solvers.build_expression.buildexpression method)": [[2, "spatialpy.solvers.build_expression.BuildExpression.with_namespace"]], "export() (in module spatialpy.stochss.stochss_export)": [[3, "spatialpy.stochss.stochss_export.export"]], "spatialpy.stochss": [[3, "module-spatialpy.stochss"]], "spatialpy.stochss.stochss_export": [[3, "module-spatialpy.stochss.stochss_export"]]}})
\ No newline at end of file
diff --git a/requirements.txt b/requirements.txt
index ce1e4019..0f1f72d0 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -2,3 +2,4 @@ matplotlib>=3.0.3
 meshio>=5.3.2
 scipy>=1.4.1
 plotly>=4.1.0
+scons>=4.4.0
diff --git a/run_coverage.sh b/run_coverage.sh
index b566b0e3..718b4211 100755
--- a/run_coverage.sh
+++ b/run_coverage.sh
@@ -4,4 +4,5 @@
 
 coverage run --source=spatialpy test/run_unit_tests.py -m develop
 coverage run --source=spatialpy test/run_integration_tests.py -m develop
+coverage run --source=spatialpy test/run_system_tests.py -m develop
 coverage html
diff --git a/spatialpy/__version__.py b/spatialpy/__version__.py
index 31bd194c..3ea05e6e 100644
--- a/spatialpy/__version__.py
+++ b/spatialpy/__version__.py
@@ -21,7 +21,7 @@
 # @website https://github.com/StochSS/SpatialPy
 # =============================================================================
 
-__version__      = '1.2.1'
+__version__      = '1.2.2'
 __title__        = 'SpatialPy'
 __description__  = 'Python Interface for Spatial Stochastic Biochemical Simulations'
 __url__          = 'https://spatialpy.github.io/SpatialPy/'


Test patch:
diff --git a/.github/workflows/run_system_tests.yaml b/.github/workflows/run_system_tests.yaml
new file mode 100644
index 00000000..9ca38c8c
--- /dev/null
+++ b/.github/workflows/run_system_tests.yaml
@@ -0,0 +1,30 @@
+name: Run SpatialPy System Tests
+
+on:
+  push:
+    branches: [staging, develop]
+
+jobs:
+  run-tests:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: [ ubuntu-latest ]
+
+    steps:
+    - name: Initialize environment
+      uses: actions/checkout@v2
+
+    - name: Install Python
+      uses: actions/setup-python@v2
+      with:
+        python-version: '3.7'
+
+    - name: Install Python dependencies
+      run: | 
+        python3 -m pip install --upgrade pip
+        python3 -m pip install -r requirements.txt
+        python3 -m pip install coverage
+        
+    - name: Run tests
+      run: coverage run --source=spatialpy test/run_system_tests.py
diff --git a/test/__init__.py b/test/__init__.py
new file mode 100644
index 00000000..e69de29b
diff --git a/test/integration_tests/__init__.py b/test/integration_tests/__init__.py
new file mode 100644
index 00000000..e69de29b
diff --git a/test/test_mincde.py b/test/integration_tests/test_mincde.py
similarity index 100%
rename from test/test_mincde.py
rename to test/integration_tests/test_mincde.py
diff --git a/test/test_model.py b/test/integration_tests/test_model.py
similarity index 100%
rename from test/test_model.py
rename to test/integration_tests/test_model.py
diff --git a/test/test_solver.py b/test/integration_tests/test_solver.py
similarity index 99%
rename from test/test_solver.py
rename to test/integration_tests/test_solver.py
index 01a72455..e3f3cfd1 100644
--- a/test/test_solver.py
+++ b/test/integration_tests/test_solver.py
@@ -204,7 +204,7 @@ def test_solver_expressions(self):
         Ensure that expression conversions to C++ result in (roughly) equivalent values as Python.
         """
         tmpdir = tempfile.mkdtemp()
-        src_path = os.path.join(os.path.dirname(__file__), "assets", "evaluate.c")
+        src_path = os.path.join(os.path.dirname(os.path.dirname(__file__)), "assets", "evaluate.c")
         exe_path = os.path.join(tmpdir, "test")
 
         def build(expr_args: "list[str]", expr_str: "str", use_bool=False):
diff --git a/test/test_threads.py b/test/integration_tests/test_threads.py
similarity index 100%
rename from test/test_threads.py
rename to test/integration_tests/test_threads.py
diff --git a/test/models/birth_death.py b/test/models/birth_death.py
new file mode 100644
index 00000000..c30ca4f1
--- /dev/null
+++ b/test/models/birth_death.py
@@ -0,0 +1,50 @@
+# SpatialPy is a Python 3 package for simulation of
+# spatial deterministic/stochastic reaction-diffusion-advection problems
+# Copyright (C) 2019 - 2023 SpatialPy developers.
+
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as
+# published by the Free Software Foundation.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU GENERAL PUBLIC LICENSE Version 3 for more details.
+
+# You should have received a copy of the GNU General Public License
+# along with this program.  If not, see <http://www.gnu.org/licenses/>.
+''' spatialpy model file for the spatial birth death example. '''
+import spatialpy
+
+def create_birth_death():
+    ''' Create the spatial birth death model. '''
+    model = spatialpy.Model(name='Spatial Birth-Death')
+
+    model.HABITAT = "Habitat"
+
+    domain = spatialpy.Domain.create_2D_domain(
+        xlim=(0, 1), ylim=(0, 1), numx=10, numy=10, type_id=model.HABITAT, fixed=True
+    )
+    model.add_domain(domain)
+
+    rabbits = spatialpy.Species(name='Rabbits', diffusion_coefficient=0.1)
+    model.add_species(rabbits)
+
+    init_rabbit_pop = spatialpy.ScatterInitialCondition(species='Rabbits', count=100)
+    model.add_initial_condition(init_rabbit_pop)
+
+    k_birth = spatialpy.Parameter(name='k_birth', expression=10)
+    k_death = spatialpy.Parameter(name='k_death', expression=0.1)
+    model.add_parameter([k_birth, k_death])
+
+    birth = spatialpy.Reaction(
+        name='birth', reactants={}, products={"Rabbits":1}, rate="k_birth"
+    )
+    death = spatialpy.Reaction(
+        name='death', reactants={"Rabbits":1}, products={}, rate="k_death"
+    )
+    model.add_reaction([birth, death])
+
+    tspan = spatialpy.TimeSpan.linspace(t=10, num_points=11, timestep_size=1)
+    model.timespan(tspan)
+    return model
diff --git a/test/run_integration_tests.py b/test/run_integration_tests.py
index ed430f1f..f35af4eb 100644
--- a/test/run_integration_tests.py
+++ b/test/run_integration_tests.py
@@ -14,8 +14,10 @@
 
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
-
-import unittest, sys, os
+''' Testing suite for integration tests. '''
+import os
+import sys
+import unittest
 import argparse
 
 parser = argparse.ArgumentParser()
@@ -28,9 +30,9 @@
         print('Running tests in develop mode. Appending repository directory to system path.')
         sys.path.append(os.path.join(os.path.dirname(__file__), '..'))
 
-    import test_model
-    import test_solver
-    #import test_mincde
+    from integration_tests import test_model
+    from integration_tests import test_solver
+    #from integration_tests import test_mincde
 
     modules = [
         test_model,
@@ -42,7 +44,7 @@
         suite = unittest.TestLoader().loadTestsFromModule(module)
         runner = unittest.TextTestRunner(failfast=args.mode == 'develop')
 
-        print("Executing: {}".format(module))
+        print(f"Executing: {module}")
         result = runner.run(suite)
         print('=' * 70)
         if not result.wasSuccessful():
diff --git a/test/run_system_tests.py b/test/run_system_tests.py
new file mode 100644
index 00000000..f4a71bd1
--- /dev/null
+++ b/test/run_system_tests.py
@@ -0,0 +1,47 @@
+#!/usr/bin/env python3
+# SpatialPy is a Python 3 package for simulation of
+# spatial deterministic/stochastic reaction-diffusion-advection problems
+# Copyright (C) 2019 - 2023 SpatialPy developers.
+
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as
+# published by the Free Software Foundation.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU GENERAL PUBLIC LICENSE Version 3 for more details.
+
+# You should have received a copy of the GNU General Public License
+# along with this program.  If not, see <http://www.gnu.org/licenses/>.
+''' Testing suite for system tests. '''
+import os
+import sys
+import unittest
+import argparse
+
+parser = argparse.ArgumentParser()
+parser.add_argument('-m', '--mode', default='develop', choices=['develop', 'release'],
+                    help='Run system tests in develop mode or release mode.')
+
+if __name__ == '__main__':
+    args = parser.parse_args()
+    if args.mode == 'develop':
+        print('Running system tests in develop mode. Appending repository directory to system path.')
+        sys.path.append(os.path.join(os.path.dirname(__file__), '..'))
+
+    from system_tests import test_compiler
+
+    modules = [
+        test_compiler
+    ]
+
+    for module in modules:
+        suite = unittest.TestLoader().loadTestsFromModule(module)
+        runner = unittest.TextTestRunner(failfast=args.mode == 'develop')
+
+        print(f"Executing: {module}")
+        result = runner.run(suite)
+        print('=' * 70)
+        if not result.wasSuccessful():
+            sys.exit(not result.wasSuccessful())
diff --git a/test/system_tests/__init__.py b/test/system_tests/__init__.py
new file mode 100644
index 00000000..e69de29b
diff --git a/test/system_tests/test_compiler.py b/test/system_tests/test_compiler.py
new file mode 100755
index 00000000..3e6bdf78
--- /dev/null
+++ b/test/system_tests/test_compiler.py
@@ -0,0 +1,39 @@
+#!/usr/bin/env python3
+# SpatialPy is a Python 3 package for simulation of
+# spatial deterministic/stochastic reaction-diffusion-advection problems
+# Copyright (C) 2019 - 2023 SpatialPy developers.
+
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 as
+# published by the Free Software Foundation.
+
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU GENERAL PUBLIC LICENSE Version 3 for more details.
+
+# You should have received a copy of the GNU General Public License
+# along with this program.  If not, see <http://www.gnu.org/licenses/>.
+''' Tests from the compiler. '''
+import os
+import sys
+import unittest
+
+sys.path.insert(1, os.path.abspath(os.getcwd()))
+from test.models.birth_death import create_birth_death # pylint: disable=wrong-import-position
+
+class TestCompiler(unittest.TestCase):
+    '''
+    ################################################################################################
+    System test for compiler.
+    ################################################################################################
+    '''
+    def setUp(self):
+        self.model = create_birth_death()
+
+    def test_constructor(self):
+        """ Test the compiler. """
+        _ = self.model.run()
+
+if __name__ == '__main__':
+    unittest.main()