SoroushVahidi/scidocs huggingface dataset:
Efficient Name Disambiguation for Large-Scale Databases
(2006)

Name disambiguation can occur when one is seeking a list of publications of an author who has used different name variations and when there are multiple other authors with the same name. We present an efficient integrative framework for solving the name disambiguation problem: a blocking method retrieves candidate classes of authors with similar names and a clustering method, DBSCAN, clusters papers by author. The distance metric between papers used in DBSCAN is calculated by an online active selection support vector machine algorithm (LASVM), yielding a simpler model, lower test errors and faster prediction time than a standard SVM. We prove that by recasting transitivity as density reachability in DBSCAN, transitivity is guaranteed for core points. For evaluation, we manually annotated 3,355 papers yielding 490 authors and achieved 90.6% pairwise-F1. For scalability, authors in the entire CiteSeer dataset, over 700,000 papers, were readily disambiguated.
Automatic Segmentation of Liver Tumor in CT Images with Deep Convolutional Neural Networks
(2015)

Liver tumors segmentation from computed tomography (CT) images is an essential task for diagnosis and treatments of liver cancer. However, it is difficult owing to the variability of appearances, fuzzy boundaries, heterogeneous densities, shapes and sizes of lesions. In this paper, an automatic method based on convolutional neural networks (CNNs) is presented to segment lesions from CT images. The CNNs is one of deep learning models with some convolutional filters which can learn hierarchical features from data. We compared the CNNs model to popular machine learning algorithms: AdaBoost, Random Forests (RF), and support vector machine (SVM). These classifiers were trained by handcrafted features containing mean, variance, and contextual features. Experimental evaluation was performed on 30 portal phase enhanced CT images using leave-one-out cross validation. The average Dice Similarity Coefficient (DSC), precision, and recall achieved of 80.06% ± 1.63%, 82.67% ± 1.43%, and 84.34% ± 1.61%, respectively. The results show that the CNNs method has better performance than other methods and is promising in liver tumor segmentation.
Comparison of Nanostring nCounter® Data on FFPE Colon Cancer Samples and Affymetrix Microarray Data on Matched Frozen Tissues
(2016)

The prognosis of colorectal cancer (CRC) stage II and III patients remains a challenge due to the difficulties of finding robust biomarkers suitable for testing clinical samples. The majority of published gene signatures of CRC have been generated on fresh frozen colorectal tissues. Because collection of frozen tissue is not practical for routine surgical pathology practice, a clinical test that improves prognostic capabilities beyond standard pathological staging of colon cancer will need to be designed for formalin-fixed paraffin-embedded (FFPE) tissues. The NanoString nCounter® platform is a gene expression analysis tool developed for use with FFPE-derived samples. We designed a custom nCounter® codeset based on elements from multiple published fresh frozen tissue microarray-based prognostic gene signatures for colon cancer, and we used this platform to systematically compare gene expression data from FFPE with matched microarray array data from frozen tissues. Our results show moderate correlation of gene expression between two platforms and discovery of a small subset of genes as candidate biomarkers for colon cancer prognosis that are detectable and quantifiable in FFPE tissue sections.
A Generic Layered Architecture for Context Aware Applications
(2014)

As pervasive computing is at its preliminary stage a number of computing solutions were proposed and more are still under experimentation. In this paper a four layered generic architecture is proposed with a recommended components so as to support context awareness for pervasive applications. Detail of each layer is described sufficiently to insight the process of context generation from low level contextual data up to high level context reporting scheme in a given pervasive environment. The implementation section of this article describes how the context reasoning component employee different level of reasoning techniques such as knowledge acquisition, context based rule execution and the application of ontology in pervasive computing. © 2014 The Authors. Published by Elsevier B.V. Peer-review under responsibility of the Program Chairs of EICM-2014.
CTR prediction for contextual advertising: learning-to-rank approach
(2013)

Contextual advertising is a textual advertising displayed within the content of a generic web page. Predicting the probability that users will click on ads plays a crucial role in contextual advertising because it influences ranking, filtering, placement, and pricing of ads. In this paper, we introduce a click-through rate prediction algorithm based on the learning-to-rank approach. Focusing on the fact that some of the past click data are noisy and ads are ranked as lists, we build a ranking model by using partial click logs and then a regression model on it. We evaluated this approach offline on a data set based on logs from an ad network. Our method is observed to achieve better results than other baselines in our three metrics.
Design of Novel Reconfigurable Reflectarrays With Single-Bit Phase Resolution for Ku-Band Satellite Antenna Applications
(2016)

Reconfigurable reflectarray antennas operating in Ku-band are presented in this paper. First, a novel multilayer unit-cell based on polarization turning concept is proposed to achieve the single-bit phase shift required for reconfigurable reflectarray applications. The principle of the unit-cell is discussed using the current model and the space match condition, along with simulations to corroborate the design and performance criteria. Then, an offset-fed configuration is developed to verify performance of the unit-cell in antenna application, and its polarization transformation property is elaborated. Finally, an offset-fed reflectarray with 10 × 10 elements is developed and fabricated. The dual-polarized antenna utilizes the control code matrices to accomplish a wide angle beam-scanning. A full-wave analysis is applied to the reflectarray, and detailed results are presented and discussed. This electronically steerable reflectarray antenna has significant potential for satellite applications, due to its wide operating band, simple control and beam-scanning capability.
An agile process model for product derivation in software product line engineering
(2012)

Software Product Lines (SPL) and Agile practices have emerged as new paradigms for developing software. Both approaches share common goals; such as improving productivity, reducing time to market, decreasing development costs and increasing customer satisfaction. These common goals provide the motivation for this research. We believe that integrating Agile practices into SPL can bring a balance between agility and formalism. However, there has been little research on such integration. We have been researching the potential of integrating Agile approaches in one of the key SPL process areas, product derivation. In this paper we present an outline of our Agile process model for product derivation that was developed through industry based case study research.
A Proximity Authentication System for Smartphones
(2016)

Authenticating whether two smartphones are in close proximity is important in smartphone security. For example, the authentication result can be used to pair two devices and construct a secure communication channel between them. Many existing proximity authentication systems rely on short range networks-the communication is usually restricted in short range networks. However, this approach is inadequate when we want to verify whether the communication distance is within a few centimeters, i.e. near field. To address this challenge, many other techniques construct systems based on the near field communication (NFC) system. Unfortunately, only a small portion of smart devices in the current market are equipped with NFC chips. The purpose of this paper is to provide a close proximity authentication system which does not depend on NFC chips. We devise a system to achieve close proximity authentication by using correlated finger movements on the two smartphones. Human input usually contains errors and is of low entropy, which affects the usability and security of our system. We solve these issues in an efficient way, considering the limited computational resources on smart devices. Our system does not need any prior secret information shared between the two devices, and generates the same high-entropy cryptographic key for both devices in a successful authentication. The efficiency of the system is validated by evaluations on Motorola Droid smartphones.
Survey on Computer Vision for UAVs: Current Developments and Trends
(2017)

During last decade the scientific research on Unmanned Aerial Vehicless (UAVs) increased spectacularly and led to the design of multiple types of aerial platforms. The major challenge today is the development of autonomously operating aerial agents capable of completing missions independently of human interaction. To this extent, visual sensing techniques have been integrated in the control pipeline of the UAVs in order to enhance their navigation and guidance skills. The aim of this article is to present a comprehensive literature review on vision based applications for UAVs focusing mainly on current developments and trends. These applications are sorted in different categories according to the research topics among various research groups. More specifically vision based position-attitude control, pose estimation and mapping, obstacle detection as well as target tracking are the identified components towards autonomous agents. Aerial platforms could reach greater level of autonomy by integrating all these technologies onboard. Additionally, throughout this article the concept of fusion multiple sensors is highlighted, while an overview on the challenges C. Kanellakis ( ) · G. Nikolakopoulos Luleå University of Technology, Luleå, Sweden e-mail: christoforos.kanellakis@ltu.se G. Nikolakopoulos e-mail: geonik@ltu.se addressed and future trends in autonomous agent development will be also provided.
Persistent Point Feature Histograms for 3 D Point Clouds
(2008)

This paper proposes a novel way of characterizing the local geometry of 3D points, using persistent feature histograms. The relationships between the neighbors of a point are analyzed and the resulted values are stored in a 16-bin histogram. The histograms are pose and point cloud density invariant and cope well with noisy datasets. We show that geometric primitives have unique signatures in this feature space, preserved even in the presence of additive noise. To extract a compact subset of points which characterizes a point cloud dataset, we perform an in-depth analysis of all point feature histograms using different distance metrics. Preliminary results show that point clouds can be roughly segmented based on the uniqueness of geometric primitives feature histograms. We validate our approach on datasets acquired from laser sensors in indoor (kitchen) environments.
Towards a benchmark for RGB-D SLAM evaluation
(2011)

We provide a large dataset containing RGB-D image sequences and the ground-truth camera trajectories with the goal to establish a benchmark for the evaluation of visual SLAM systems. Our dataset contains the color and depth images of a Microsoft Kinect sensor and the groundtruth trajectory of camera poses. The data was recorded at full frame rate (30 Hz) and sensor resolution (640x480). The ground-truth trajectory was obtained from a high-accuracy motion-capture system with eight high-speed tracking cameras (100 Hz). Further, we provide the accelerometer data from the Kinect. Finally, we propose an evaluation criterion for measuring the quality of the estimated camera trajectory of visual SLAM systems.
Surface feature detection and description with applications to mesh matching
(2009)

In this paper we revisit local feature detectors/descriptors developed for 2D images and extend them to the more general framework of scalar fields defined on 2D manifolds. We provide methods and tools to detect and describe features on surfaces equiped with scalar functions, such as photometric information. This is motivated by the growing need for matching and tracking photometric surfaces over temporal sequences, due to recent advancements in multiple camera 3D reconstruction. We propose a 3D feature detector (MeshDOG) and a 3D feature descriptor (MeshHOG) for uniformly triangulated meshes, invariant to changes in rotation, translation, and scale. The descriptor is able to capture the local geometric and/or photometric properties in a succinct fashion. Moreover, the method is defined generically for any scalar function, e.g., local curvature. Results with matching rigid and non-rigid meshes demonstrate the interest of the proposed framework.
Fast Point Feature Histograms (FPFH) for 3D registration
(2009)

In our recent work [1], [2], we proposed Point Feature Histograms (PFH) as robust multi-dimensional features which describe the local geometry around a point p for 3D point cloud datasets. In this paper, we modify their mathematical expressions and perform a rigorous analysis on their robustness and complexity for the problem of 3D registration for overlapping point cloud views. More concretely, we present several optimizations that reduce their computation times drastically by either caching previously computed values or by revising their theoretical formulations. The latter results in a new type of local features, called Fast Point Feature Histograms (FPFH), which retain most of the discriminative power of the PFH. Moreover, we propose an algorithm for the online computation of FPFH features for realtime applications. To validate our results we demonstrate their efficiency for 3D registration and propose a new sample consensus based method for bringing two datasets into the convergence basin of a local non-linear optimizer: SAC-IA (SAmple Consensus Initial Alignment).
GENERATIVE ADVERSARIAL NETWORK BASED ACOUSTIC SCENE TRAINING SET AUGMENTATION AND SELECTION USING SVM HYPERPLANE
(2017)

Although it is typically expected that using a large amount of labeled training data would lead to improve performance in deep learning, it is generally difficult to obtain such DataBase (DB). In competitions such as the Detection and Classification of Acoustic Scenes and Events (DCASE) challenge Task 1, participants are constrained to use a relatively small DB as a rule, which is similar to the aforementioned issue. To improve Acoustic Scene Classification (ASC) performance without employing additional DB, this paper proposes to use Generative Adversarial Networks (GAN) based method for generating additional training DB. Since it is not clear whether every sample generated by GAN would have equal impact in classification performance, this paper proposes to use Support Vector Machine (SVM) hyper plane for each class as reference for selecting samples, which have class discriminative information. Based on the crossvalidated experiments on development DB, the usage of the generated features could improve ASC performance.
Visual tree detection for autonomous navigation in forest environment
(2008)

This paper describes a classification based tree detection method for autonomous navigation of forest vehicles in forest environment. Fusion of color, and texture cues has been used to segment the image into tree trunk and background objects. The segmentation of images into tree trunk and background objects is a challenging task due to high variations of illumination, effect of different color shades, non-homogeneous bark texture, shadows and foreshortening. To accomplish this, the approach has been to find the best combinations of color, and texture descriptors, and classification techniques. An additional task has been to estimate the distance between forest vehicle and the base of segmented trees using monocular vision. A simple heuristic distance measurement method is proposed that is based on pixel height and a reference width. The performance of various color and texture operators, and accuracy of classifiers has been evaluated using cross validation techniques.
Learning Semantic Correspondences with Less Supervision
(2009)

A central problem in grounded language acquisition is learning the correspondences between a rich world state and a stream of text which references that world state. To deal with the high degree of ambiguity present in this setting, we present a generative model that simultaneously segments the text into utterances and maps each utterance to a meaning representation grounded in the world state. We show that our model generalizes across three domains of increasing difficulty—Robocup sportscasting, weather forecasts (a new domain), and NFL recaps.
A Primer on Memory Consistency and Cache Coherence
(2011)

Many modern computer systems and most multicore chips (chip multiprocessors) support shared memory in hardware. In a shared memory system, each of the processor cores may read and write to a single shared address space. For a shared memory machine, the memory consistency model defines the architecturally visible behavior of its memory system. Consistency definitions provide rules about loads and stores (or memory reads and writes) and how they act upon memory. As part of supporting a memory consistency model, many machines also provide cache coherence protocols that ensure that multiple cached copies of data are kept up-to-date. The goal of this primer is to provide readers with a basic understanding of consistency and coherence. This understanding includes both the issues that must be solved as well as a variety of solutions. We present both highlevel concepts as well as specific, concrete examples from real-world systems. vi
Improving Movie Gross Prediction through News Analysis
(2009)

Traditional movie gross predictions are based on numerical and categorical movie data from The Internet Movie Database (IMDB). In this paper, we use the quantitative news data generated by Lydia, our system for large-scale news analysis, to help people to predict movie grosses. By analyzing two different models (regression and k-nearest neighbor models), we find models using only news data can achieve similar performance to those using IMDB data. Moreover, we can achieve better performance by using the combination of IMDB data and news data. Further, the improvement is statistically significant.
Prevalence of chronic pain with neuropathic characteristics in the general population
(2008)

We conducted a large nationwide postal survey to estimate the prevalence of chronic pain with or without neuropathic characteristics in the French general population. A questionnaire aimed at identifying chronic pain (defined as daily pain for at least 3 months), evaluating its intensity, duration and body locations, was sent to a representative sample of 30,155 subjects. The DN4 questionnaire was used to identify neuropathic characteristics. Of the questionnaires, 24,497 (81.2%) were returned and 23,712 (96.8%) could be assessed. Seven thousand five hundred and twenty-two respondents reported chronic pain (prevalence=31.7%; [95%CI: 31.1-32.3]) and 4709 said the pain intensity was moderate to severe (prevalence=19.9%; [95%CI: 19.5-20.4]). Neuropathic characteristics were reported by 1631 respondents with chronic pain (prevalence=6.9%; [95%CI: 6.6-7.2]), which was moderate to severe in 1209 (prevalence=5.1% [95%CI: 4.8-5.4]). A higher prevalence of chronic pain with neuropathic characteristics was associated with middle age (50-64 years), manual professions and those living in rural areas. It was more frequently located in the lower limbs and its intensity and duration were higher in comparison with chronic pain without neuropathic characteristics. This large national population-based study indicates that a significant proportion of chronic pain patients report neuropathic characteristics. We identified distinctive socio-demographic profile and clinical features indicating that chronic pain with neuropathic characteristics is a specific health problem.
Self-Oscillating Fluxgate-Based Quasi-Digital Sensor for DC High-Current Measurement
(2015)

A quasi-digital dc current sensor with rated current of ±600 A while overload current of about ±750 A is proposed in this paper. The new sensor is based on the open-loop self-oscillating fluxgate technology, but its originality is using a microcontroller unit to detect the duty cycle of the exciting voltage of the fluxgate. Compared with the published similar method, the whole signal chain of the new sensor is quasi-digital and without low-pass filter and analog-to-digital converter required when connected to digital systems. A precisely theoretical equation with respect to the linear dependence between the duty cycle and the current to be measured is established. Based on the equation, factors affecting the sensor sensitivity, accuracy, and resolution are determined, which constitutes the theoretical basis on the optimization design of the new sensor. The sensor linearity is improved using the least-squares polynomial fitting method. Some key specifications including the linearity, repeatability, and power supply effect of the sensor are characterized. The measurement results show that the linearity of the new sensor with the theoretical equation is better than 1.7% in the full scale of ±600 A, and can be improved to 0.3% when the fifth-order polynomial fitting method is used.
Applying Organizational Routines in understanding organizational change
(2005)

HAL is a multi-disciplinary open access archive for the deposit and dissemination of scientific research documents, whether they are published or not. The documents may come from teaching and research institutions in France or abroad, or from public or private research centers. L’archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d’enseignement et de recherche français ou étrangers, des laboratoires publics ou privés. Applying Organizational Routines in understanding organizational change Markus Becker, Nathalie Lazaric, Richard Nelson, Sidney G. Winter
Text and Data Mining Techniques in Adverse Drug Reaction Detection
(2015)

We review data mining and related computer science techniques that have been studied in the area of drug safety to identify signals of adverse drug reactions from different data sources, such as spontaneous reporting databases, electronic health records, and medical literature. Development of such techniques has become more crucial for public heath, especially with the growth of data repositories that include either reports of adverse drug reactions, which require fast processing for discovering signals of adverse reactions, or data sources that may contain such signals but require data or text mining techniques to discover them. In order to highlight the importance of contributions made by computer scientists in this area so far, we categorize and review the existing approaches, and most importantly, we identify areas where more research should be undertaken.