SoroushVahidi/scidocs huggingface dataset:
Statistical physics of vaccination
(2016)

Historically, infectious diseases caused considerable damage to human societies, and they continue to do so today. To help reduce their impact, mathematical models of disease transmission have been studied to help understand disease dynamics and inform prevention strategies. Vaccination–one of the most important preventive measures of modern times–is of great interest both theoretically and empirically. And in contrast to traditional approaches, recent research increasingly explores the pivotal implications of individual behavior and heterogeneous contact patterns in populations. Our report reviews the developmental arc of theoretical epidemiology with emphasis on vaccination, as it led from classical models assuming homogeneously mixing (mean-field) populations and ignoring human behavior, to recent models that account for behavioral feedback and/or population spatial/social structure. Many of the methods used originated in statistical physics, such as lattice and network models, and their associated analytical frameworks. Similarly, the feedback loop between vaccinating behavior and disease propagation forms a coupled nonlinear system with analogs in physics. We also review the new paradigm of digital epidemiology, wherein sources of digital data such as online social media are mined for high-resolution information on epidemiologically relevant individual behavior. Armed with the tools and concepts of statistical physics, and further assisted by new sources of digital data, models that capture nonlinear interactions between behavior and disease dynamics offer a novel way of modeling real-world phenomena, and can help improve health outcomes. We conclude the review by discussing open problems in the field and promising directions for future research.
A Study of Various Feature Extraction Methods on a Motor Imagery Based Brain Computer Interface System
(2016)

INTRODUCTION
Brain Computer Interface (BCI) systems based on Movement Imagination (MI) are widely used in recent decades. Separate feature extraction methods are employed in the MI data sets and classified in Virtual Reality (VR) environments for real-time applications.


METHODS
This study applied wide variety of features on the recorded data using Linear Discriminant Analysis (LDA) classifier to select the best feature sets in the offline mode. The data set was recorded in 3-class tasks of the left hand, the right hand, and the foot motor imagery.


RESULTS
The experimental results showed that Auto-Regressive (AR), Mean Absolute Value (MAV), and Band Power (BP) features have higher accuracy values,75% more than those for the other features.


DISCUSSION
These features were selected for the designed real-time navigation. The corresponding results revealed the subject-specific nature of the MI-based BCI system; however, the Power Spectral Density (PSD) based α-BP feature had the highest averaged accuracy.
Spatial graphlet matching kernel for recognizing aerial image categories
(2012)

This paper presents a method for recognizing aerial image categories based on matching graphlets(i.e., small connected subgraphs) extracted from aerial images. By constructing a Region Adjacency Graph (RAG) to encode the geometric property and the color distribution of each aerial image, we cast aerial image category recognition as RAG-to-RAG matching. Based on graph theory, RAG-to-RAG matching is conducted by matching all their respective graphlets. Towards an effective graphlet matching process, we develop a manifold embedding algorithm to transfer different-sized graphlets into equal length feature vectors and further integrate these feature vectors into a kernel. This kernel is used to train a SVM [8] classifier for aerial image categories recognition. Experimental results demonstrate our method outperforms several state-of-the-art object/scene recognition models.
A Study of Android Malware Detection Techniques and Machine Learning
(2016)

Android OS is one of the widely used mobile Operating Systems. The number of malicious applications and adwares are increasing constantly on par with the number of mobile devices. A great number of commercial signature based tools are available on the market which prevent to an extent the penetration and distribution of malicious applications. Numerous researches have been conducted which claims that traditional signature based detection system work well up to certain level and malware authors use numerous techniques to evade these tools. So given this state of affairs, there is an increasing need for an alternative, really tough malware detection system to complement and rectify the signature based system. Recent substantial research focused on machine learning algorithms that analyze features from malicious application and use those features to classify and detect unknown malicious applications. This study summarizes the evolution of malware detection techniques based on machine learning algorithms focused
Selecting image pairs for SfM by introducing Jaccard similarity
(2017)

We present a new approach for selecting image pairs that are more likely to match in Structure from Motion (SfM). We propose to use Jaccard Similarity (JacS) which shows how many different visual words is shared by an image pair. In our method, the similarity between images is evaluated using JacS of bag-of-visual-words in addition to tf-idf, which is popular for this purpose. To evaluate the efficiency of our method, we carry out experiments on our original datasets as well as on “Pantheon” dataset, which is derived from Flickr. The result of our method using both JacS and tf-idf is better than the results of a standard method using tf-idf only.
Collective List-Only Entity Linking: A Graph-Based Approach
(2018)

List-only entity linking (EL) is the task of mapping ambiguous mentions in texts to target entities in a group of entity lists. Different from traditional EL task, which leverages rich semantic relatedness in knowledge bases to improve linking accuracy, the list-only EL can merely take advantage of co-occurrences information in entity lists. State-of-the-art work utilizes co-occurrences information to enrich entity descriptions which are further used to calculate local compatibility between mentions and entities to determine results. Nonetheless, entity coherence is also deemed to play an important part in EL, which is yet currently neglected. In this paper, in addition to local compatibility, we take into account global coherence among entities. Specifically, we propose to harness co-occurrences in entity lists for mining both explicit and implicit entity relations. The relations are then integrated into an entity graph, on which personalized PageRank is incorporated to compute entity coherence. The final results are derived by combining local mention-entity similarity and global entity coherence. The experimental studies validate the superiority of our method. Our proposal not only improves the performance of the list-only EL, but also opens up the bridge between the list-only EL and conventional EL solutions.
Keeping up to date: An academic researcher's information journey
(2017)

Keeping up to date with research developments is a central activity of academic researchers, but researchers face difficulties in managing the rapid growth of available scientific information. This study examined how researchers stay up to date, using the information journey model as a framework for analysis and investigating which dimensions influence information behaviors. We designed a 2-round study involving semistructured interviews and prototype testing with 61 researchers with 3 levels of seniority (PhD student to professor). Data were analyzed following a semistructured qualitative approach. Five key dimensions that influence information behaviors were identified: level of seniority, information sources, state of the project, level of familiarity, and how well defined the relevant community is. These dimensions are interrelated and their values determine the flow of the information journey. Across all levels of professional expertise, researchers used similar hard (formal) sources to access content, while soft (interpersonal) sources were used to filter information. An important “pain point” that future information tools should address is helping researchers filter information at the point of need. Introduction
Aspects of anthocyanin absorption, metabolism and pharmacokinetics in humans.
(2006)

Interest in the health-promoting properties of berry anthocyanins is intensifying; however, findings are primarily based on in vitro characteristics, leaving mechanisms associated with absorption, metabolism and pharmacokinetics largely unexplored. The present review integrates the available anthocyanin literature with that of similar flavonoids or polyphenols in order to form hypotheses regarding absorption, metabolism and clearance in humans. Of the limited available literature regarding the absorption and clearance kinetics of anthocyanins, maximum plasma concentrations are reported anywhere between 1.4 and 592 nmol/l and occur at 0.5-4 h post-consumption (doses; 68-1300 mg). Average urinary excretion is reported between 0.03 and 4 % of the ingested dose, having elimination half-lives of 1.5-3 h. In addition, much is unknown regarding the metabolism of anthocyanins. The most commonly cited conjugation reactions involved in the metabolism of other flavonoids include glucuronidation, methylation and sulfation. It is reasonable to suspect that anthocyanins are metabolised in much the same manner; however, until recently, there was little evidence to suggest that anthocyanins were metabolised to any significant extent. New evidence now suggests that anthocyanins are absorbed and transported in human serum and urine primarily as metabolites, with recent studies documenting as much as 68-80 % of anthocyanins as metabolised derivatives in human urine. Further research is required to resolve mechanisms associated with the absorption, metabolism and clearance of anthocyanins in order to establish their true biological activities and health effects. The presented evidence will hopefully focus future research, refining study design and propagating a more complete understanding of anthocyanins' biological significance in humans.
FRACTIONAL DIFFERENTIAL EQUATIONS IN BANACH SPACES
(2012)

This paper deals with some impulsive fractional differential equations in Banach spaces. Utilizing the Leray-Schauder fixed point theorem and the impulsive nonlinear singular version of the Gronwall inequality, the existence of PC-mild solutions for some fractional differential equations with impulses are obtained under some easily checked conditions. At last, an example is given for demonstration.
Vehicle License Plate Recognition Based on Extremal Regions and Restricted Boltzmann Machines
(2016)

This paper presents a vehicle license plate recognition method based on character-specific extremal regions (ERs) and hybrid discriminative restricted Boltzmann machines (HDRBMs). First, coarse license plate detection (LPD) is performed by top-hat transformation, vertical edge detection, morphological operations, and various validations. Then, character-specific ERs are extracted as character regions in license plate candidates. Followed by suitable selection of ERs, the segmentation of characters and coarse-to-fine LPD are achieved simultaneously. Finally, an offline trained pattern classifier of HDRBM is applied to recognize the characters. The proposed method is robust to illumination changes and weather conditions during 24 h or one day. Experimental results on thorough data sets are reported to demonstrate the effectiveness of the proposed approach in complex traffic environments.
A vehicle license plate recognition system based on analysis of maximally stable extremal regions
(2012)

Vehicle License Plate Recognition (VLPR) system is a core module in Intelligent Transportation Systems (ITS). In this paper, a VLPR system is proposed. Considering that license plate localization is the most important and difficult part in VLPR system, we present an effective license plate localization method based on analysis of Maximally Stable Extremal Region (MSER) features. Firstly, MSER detector is utilized to extract candidate character regions. Secondly, the exact locations of license plates are inferred according to the arrangement of characters in standard license plates. The advantage of this license plate localization method is that less assumption of environmental illumination, weather and other conditions is made. After license plate localization, we continue to recognize the license plate characters and color to complete the whole VLPR system. Finally, the proposed VLPR system is tested on our own collected dataset. The experimental results show the availability and effectiveness of our VLPR system in locating and recognizing all the explicit license plates in an image.
A wideband unity-gain buffer in 0.13-μm CMOS
(2013)

In this paper, an ultra wideband analog voltage-mode buffer is presented which can drive a load impedance of 50 Ω. The presented feedback-based buffer uses a compound amplifier which is a parallel combination of a high-DC gain operational amplifier and a operation transconductance amplifier to achieve a high unity gain bandwidth. A proof-of-concept prototype is designed and fabricated in a 0.13 μm CMOS process. The simulation and measurement results of the proposed buffer are in good agreement. The prototype buffer circuit consumes 7.34 mW from a 1.3-V supply, while buffering a 2 GHz sinusoidal input signal with a 0.4 V peak-to-peak (Vpp) amplitude and driving an AC-coupled 50-Ω load.
How can human motion prediction increase transparency?
(2008)

A major issue in the field of human-robot interaction for assistance to manipulation is transparency. This basic feature qualifies the capacity for a robot to follow human movements without any human-perceptible resistive forces. In this paper we address the issue of human motion prediction in order to increase the transparency of a robotic manipulator. Our aim is not to predict the motion itself, but to study how this prediction can be used to improve the robot transparency. For this purpose, we have designed a setup for performing basic planar manipulation tasks involving movements that are demanded to the subject and thus easily predictable. Moreover, we have developed a general controller which takes a predicted trajectory (recorded from offline free motion experiments) as an input and feeds the robot motors with a weighted sum of three controllers: torque feedforward, variable stiffness control and force feedback control. Subjects were then asked to perform the same task but with or without the robot assistance (which was not visible to the subject), and with several sets of gains for the controller tuning. First results seems to indicate that when a predictive controller with open loop torque feedforward is used, in conjunction with force- feedback control, the interaction forces are minimized. Therefore, the transparency is increased.
Brain development and ADHD.
(2006)

Attention-Deficit/Hyperactivity Disorder (ADHD) is characterized by excessive inattention, hyperactivity, and impulsivity, either alone or in combination. Neuropsychological findings suggest that these behaviors result from underlying deficits in response inhibition, delay aversion, and executive functioning which, in turn, are presumed to be linked to dysfunction of frontal-striatal-cerebellar circuits. Over the past decade, magnetic resonance imaging (MRI) has been used to examine anatomic differences in these regions between ADHD and control children. In addition to quantifying differences in total cerebral volume, specific areas of interest have been prefrontal regions, basal ganglia, the corpus callosum, and cerebellum. Differences in gray and white matter have also been examined. The ultimate goal of this research is to determine the underlying neurophysiology of ADHD and how specific phenotypes may be related to alterations in brain structure.
Media Framing and Public Attitudes Toward Biofuels
(2013)

This study investigates the relationship between media framing and public opinion on the issue of biofuels—transportation fuels made from plants, animal products, or organic waste. First, the paper investigates how media framing of biofuels has changed since the issue regained national prominence in the early 2000s. Through a detailed content analysis of newspaper coverage, the paper documents an increase in negative frames between 1999 and 2008, especially frames focusing on the negative economic effects of biofuels on consumers. Second, using data from a 2010 Internet survey of a random sample of the U.S. public, the paper analyzes the relative influence of these new media frames on public attitudes toward biofuels compared with other common predictors of public opinion, such as party ID, regional economic interests, and personal identity as an environmentalist. In general, the results confirm that public attitudes toward biofuels appear to be shaped by these new media frames, especially among those who indicate a high degree of attention to the media, suggesting the relative importance of framing effects on policy attitudes for environmental and energy policies in general.
Looking Beyond the Visible Scene
(2014)

A common thread that ties together many prior works in scene understanding is their focus on the aspects directly present in a scene such as its categorical classification or the set of objects. In this work, we propose to look beyond the visible elements of a scene; we demonstrate that a scene is not just a collection of objects and their configuration or the labels assigned to its pixels - it is so much more. From a simple observation of a scene, we can tell a lot about the environment surrounding the scene such as the potential establishments near it, the potential crime rate in the area, or even the economic climate. Here, we explore several of these aspects from both the human perception and computer vision perspective. Specifically, we show that it is possible to predict the distance of surrounding establishments such as McDonald's or hospitals even by using scenes located far from them. We go a step further to show that both humans and computers perform well at navigating the environment based only on visual cues from scenes. Lastly, we show that it is possible to predict the crime rates in an area simply by looking at a scene without any real-time criminal activity. Simply put, here, we illustrate that it is possible to look beyond the visible scene.
Single motor actuated peristaltic wave generator for a soft bodied worm robot
(2016)

This paper presents the design and development of a single motor actuated peristaltic worm robot with three segments using a bio-inspired method of locomotion with one actuator that achieves optimised worm like peristaltic motion. Each segment consists of two solid circular disks that have a tendon connected through to the drive mechanism using a Bowden cable and a soft rubber skin that deforms under the compression of the tendon. Our hypothesis that a tuned peristaltic waveform can achieve improved performance of locomotion distance and clamping strength is proven using an initial test platform capable of demonstrating varying waveform types with multiple actuators. Three experiments were undertaken: (i) moving along a flat surface, (ii) moving through a confined tunnel (iii) moving through a confined tunnel whilst pulling a payload. Results from these experiments have identified the optimal parameters for a smart gearbox capable of achieving the same optimal peristaltic waveform signal as the more complex test platform but with only one actuator driving all three worm segments. Unlike other examples of peristaltic worm robots, this example uses a control method embedded within the mechanics of the design removing excessive number of actuators which contributes to miniaturisation, reduces power consumption and simplifies the overall design.
A Powerful Generative Model Using Random Weights for the Deep Image Representation
(2016)

To what extent is the success of deep visualization due to the training? Could we do deep visualization using untrained, random weight networks? To address this issue, we explore new and powerful generative models for three popular deep visualization tasks using untrained, random weight convolutional neural networks. First we invert representations in feature spaces and reconstruct images from white noise inputs. The reconstruction quality is statistically higher than that of the same method applied on well trained networks with the same architecture. Next we synthesize textures using scaled correlations of representations in multiple layers and our results are almost indistinguishable with the original natural texture and the synthesized textures based on the trained network. Third, by recasting the content of an image in the style of various artworks, we create artistic images with high perceptual quality, highly competitive to the prior work of Gatys et al. on pretrained networks. To our knowledge this is the first demonstration of image representations using untrained deep neural networks. Our work provides a new and fascinating tool to study the representation of deep network architecture and sheds light on new understandings on deep visualization.
Analysis of Flux Leakage in a Segmented Core Brushless Permanent Magnet Motor
(2009)

This paper presents an analytical model to analyze the leakage flux associated with a brushless permanent magnet motor that utilizes segmented stator core. Due to the presence of a segmented stator structure, the leakage of flux through the tooth tips becomes worthy of analysis and consideration in such a motor. A leakage parameter alpha is developed to show the effects of various design parameters on tooth-tip flux leakage that is essential in accurately predicting the air gap flux density and other output parameters in the motor. Finite-element analysis and experimental verifications are also done to validate the analytical model.
Double-Input Bidirectional DC/DC Converter Using Cell-Voltage Equalizer With Flyback Transformer
(2015)

In this paper, a double-input bidirectional dc/dc converter that uses a rechargeable battery and an ultracapacitor (UC) is proposed. This converter is connected to a cell-voltage equalizer between the battery and UC. The cell-voltage equalizer enables cell-voltage equalization and energy transfer between the battery and UC. This converter has six operational modes. These modes are investigated by reduced-power-scale circuit experiment. In addition, the circuit operation under the combination of the six modes is verified using a PSIM simulator in a large power scale.