SoroushVahidi/scidocs huggingface dataset:
Enhancements in UltraScale CLB Architecture
(2015)

Each generation of FPGA architecture benefits from optimizations around its technology node and target usage. In this paper, we discuss some of the changes made to the CLB for Xilinx's 20nm UltraScale product family. We motivate those changes and demonstrate better results than previous CLB architectures on a variety of metrics. We show that, in demanding scenarios, logic placed in an UltraScale device requires 16% less wirelength than 7-series. Designs mapped to UltraScale devices also require fewer logic tiles. In this paper, we demonstrate the utilization benefits of the UltraScale CLB attributed to certain CLB enhancements. The enhancements described herein result in an average packing improvement of 3% for the example design suite. We also show that the UltraScale architecture handles aggressive, tighter packing more gracefully than previous generations of FPGA. These significant reductions in wirelength and CLB counts translate directly into power, performance and ease-of-use benefits.
PPDDL 1 . 0 : An Extension to PDDL for Expressing Planning Domains with Probabilistic Effects
(2004)

We desribe a variation of the planning domain definition language, PDDL, that permits the modeling of probabilistic planning problems with rewards. This language, PPDDL1.0, was used as the input language for the probabilistic track of the 4th International Planning Competition. We provide the complete syntax for PPDDL1.0 and give a semantics of PPDDL1.0 planning problems in terms of Markov decision processes. Department of Computer Science, Rutgers University, Piscataway, NJ 08854, USA
Cloudy Computing: Leveraging Weather Forecasts in Energy Harvesting Sensor Systems
(2010)

To sustain perpetual operation, systems that harvest environmental energy must carefully regulate their usage to satisfy their demand. Regulating energy usage is challenging if a system's demands are not elastic and its hardware components are not energy-proportional, since it cannot precisely scale its usage to match its supply. Instead, the system must choose when to satisfy its energy demands based on its current energy reserves and predictions of its future energy supply. In this paper, we explore the use of weather forecasts to improve a system's ability to satisfy demand by improving its predictions. We analyze weather forecast, observational, and energy harvesting data to formulate a model that translates a weather forecast to a wind or solar energy harvesting prediction, and quantify its accuracy. We evaluate our model for both energy sources in the context of two different energy harvesting sensor systems with inelastic demands: a sensor testbed that leases sensors to external users and a lexicographically fair sensor network that maintains steady node sensing rates. We show that using weather forecasts in both wind- and solar-powered sensor systems increases each system's ability to satisfy its demands compared with existing prediction strategies.
Fuzzy Ontology and LSTM-Based Text Mining: A Transportation Network Monitoring System for Assisting Travel
(2019)

Intelligent Transportation Systems (ITSs) utilize a sensor network-based system to gather and interpret traffic information. In addition, mobility users utilize mobile applications to collect transport information for safe traveling. However, these types of information are not sufficient to examine all aspects of the transportation networks. Therefore, both ITSs and mobility users need a smart approach and social media data, which can help ITSs examine transport services, support traffic and control management, and help mobility users travel safely. People utilize social networks to share their thoughts and opinions regarding transportation, which are useful for ITSs and travelers. However, user-generated text on social media is short in length, unstructured, and covers a broad range of dynamic topics. The application of recent Machine Learning (ML) approach is inefficient for extracting relevant features from unstructured data, detecting word polarity of features, and classifying the sentiment of features correctly. In addition, ML classifiers consistently miss the semantic feature of the word meaning. A novel fuzzy ontology-based semantic knowledge with Word2vec model is proposed to improve the task of transportation features extraction and text classification using the Bi-directional Long Short-Term Memory (Bi-LSTM) approach. The proposed fuzzy ontology describes semantic knowledge about entities and features and their relation in the transportation domain. Fuzzy ontology and smart methodology are developed in Web Ontology Language and Java, respectively. By utilizing word embedding with fuzzy ontology as a representation of text, Bi-LSTM shows satisfactory improvement in both the extraction of features and the classification of the unstructured text of social media.
Single-structure 3-axis lorentz force magnetometer with sub-30 nT/√HZ resolution
(2014)

This work demonstrates a 3-axis Lorentz force magnetometer for electronic compass purposes. The magnetometer measures magnetic flux in 3 axes using a single structure. With 1 mW power consumption, the sensor achieves sub-30 nT/√Hz resolution in each of the 3 axes. Compared to the 3-axis Hall sensors currently used in smartphones, the 3-axis magnetometer shown here has the advantages of 10× lower noise floor and the ability to be co-fabricated with MEMS inertial sensors.
FrameBase: Representing N-Ary Relations Using Semantic Frames
(2015)

Large-scale knowledge graphs such as those in the Linked Data cloud are typically represented as subject-predicate-object triples. However, many facts about the world involve more than two entities. While n-ary relations can be converted to triples in a number of ways, unfortunately, the structurally different choices made in different knowledge sources significantly impede our ability to connect them. They also make it impossible to query the data concisely and without prior knowledge of each individual source. We present FrameBase, a wide-coverage knowledge-base schema that uses linguistic frames to seamlessly represent and query n-ary relations from other knowledge bases, at different levels of granularity connected by logical entailment. It also opens possibilities to draw on natural language processing techniques for querying and data mining.
The Role of Deliberate Practice in the Acquisition of Expert Performance
(1993)

The theoretical framework presented in this article explains expert performance as the end result of individuals' prolonged efforts to improve performance while negotiating motivational and external constraints. In most domains of expertise, individuals begin in their childhood a regimen of effortful activities (deliberate practice) designed to optimize improvement. Individual differences, even among elite performers, are closely related to assessed amounts of deliberate practice. Many characteristics once believed to reflect innate talent are actually the result of intense practice extended for a minimum of 10 years. Analysis of expert performance provides unique evidence on the potential and limits of extreme environmental adaptation and learning.
Design of Compact Dual Band High Directive Electromagnetic Bandgap (EBG) Resonator Antenna Using Artificial Magnetic Conductor
(2007)

A compact high directive EBG resonator antenna operating in two frequency bands is described. Two major contributions to this compact design are using single layer superstrate and using artificial surface as ground plane. To obtain only the lower operating frequency band using superstrate layer is enough, but to extract the upper operating frequency band both superstrate layer and artificial surface as ground plane are necessary. Therefore, design of a superstrate to work in two frequency bands is very important. Initially, using appropriate frequency selective surface (FSS) structure with square loop elements, we design an optimum superstrate layer for each frequency band separately to achieve maximum directivity. Also, to design an artificial surface to work in the upper frequency band we use a suitable FSS structure over dielectric layer backed by PEC. Next, by using the idea of FSS structure with double square loop elements we propose FSS structure with modified double square loop elements, so that it operates in both of the desired operating frequency bands simultaneously. Finally, the simulation results for two operating frequency bands are shown to have good agreement with measurements.
Functional Brain Connectivity Using fMRI in Aging and Alzheimer’s Disease
(2014)

Normal aging and Alzheimer’s disease (AD) cause profound changes in the brain’s structure and function. AD in particular is accompanied by widespread cortical neuronal loss, and loss of connections between brain systems. This degeneration of neural pathways disrupts the functional coherence of brain activation. Recent innovations in brain imaging have detected characteristic disruptions in functional networks. Here we review studies examining changes in functional connectivity, measured through fMRI (functional magnetic resonance imaging), starting with healthy aging and then Alzheimer’s disease. We cover studies that employ the three primary methods to analyze functional connectivity—seed-based, ICA (independent components analysis), and graph theory. At the end we include a brief discussion of other methodologies, such as EEG (electroencephalography), MEG (magnetoencephalography), and PET (positron emission tomography). We also describe multi-modal studies that combine rsfMRI (resting state fMRI) with PET imaging, as well as studies examining the effects of medications. Overall, connectivity and network integrity appear to decrease in healthy aging, but this decrease is accelerated in AD, with specific systems hit hardest, such as the default mode network (DMN). Functional connectivity is a relatively new topic of research, but it holds great promise in revealing how brain network dynamics change across the lifespan and in disease.
An End-to-End Signal Strength Model for Underwater Optical Communications
(2013)

In this paper, we present a generic model of signal strength in underwater optical communications. The model includes light sources, detectors, amplifier and detector circuitry, optics, as well as a simple extinction model of the water channel. The end-to-end model provides insights into optimization approaches for underwater optical modems and enables relative pose estimation between underwater optical transmitters and receivers. We instantiate our model to the AquaOptical model by determining its parameters and verifying the model prediction in a suite of pool experiments.
A dynamic bayesian network click model for web search ranking
(2009)

As with any application of machine learning, web search ranking requires labeled data. The labels usually come in the form of relevance assessments made by editors. Click logs can also provide an important source of implicit feedback and can be used as a cheap proxy for editorial labels. The main difficulty however comes from the so called position bias - urls appearing in lower positions are less likely to be clicked even if they are relevant. In this paper, we propose a Dynamic Bayesian Network which aims at providing us with unbiased estimation of the relevance from the click logs. Experiments show that the proposed click model outperforms other existing click models in predicting both click-through rate and relevance.
Unsupervised domain adaptation for robust speech recognition via variational autoencoder-based data augmentation
(2017)

Domain mismatch between training and testing can lead to significant degradation in performance in many machine learning scenarios. Unfortunately, this is not a rare situation for automatic speech recognition deployments in real-world applications. Research on robust speech recognition can be regarded as trying to overcome this domain mismatch issue. In this paper, we address the unsupervised domain adaptation problem for robust speech recognition, where both source and target domain speech are available, but word transcripts are only available for the source domain speech. We present novel augmentation-based methods that transform speech in a way that does not change the transcripts. Specifically, we first train a variational autoencoder on both source and target domain data (without supervision) to learn a latent representation of speech. We then transform nuisance attributes of speech that are irrelevant to recognition by modifying the latent representations, in order to augment labeled training data with additional data whose distribution is more similar to the target domain. The proposed method is evaluated on the CHiME-4 dataset and reduces the absolute word error rate (WER) by as much as 35% compared to the non-adapted baseline.
MagNet: A Two-Pronged Defense against Adversarial Examples
(2017)

Deep learning has shown impressive performance on hard perceptual problems. However, researchers found deep learning systems to be vulnerable to small, specially crafted perturbations that are imperceptible to humans. Such perturbations cause deep learning systems to mis-classify adversarial examples, with potentially disastrous consequences where safety or security is crucial. Prior defenses against adversarial examples either targeted specific attacks or were shown to be ineffective.
 We propose MagNet, a framework for defending neural network classifiers against adversarial examples. MagNet neither modifies the protected classifier nor requires knowledge of the process for generating adversarial examples. MagNet includes one or more separate detector networks and a reformer network. The detector networks learn to differentiate between normal and adversarial examples by approximating the manifold of normal examples. Since they assume no specific process for generating adversarial examples, they generalize well. The reformer network moves adversarial examples towards the manifold of normal examples, which is effective for correctly classifying adversarial examples with small perturbation. We discuss the intrinsic difficulties in defending against whitebox attack and propose a mechanism to defend against graybox attack. Inspired by the use of randomness in cryptography, we use diversity to strengthen MagNet. We show empirically that MagNet is effective against the most advanced state-of-the-art attacks in blackbox and graybox scenarios without sacrificing false positive rate on normal examples.
Delving into Transferable Adversarial Examples and Black-box Attacks
(2017)

An intriguing property of deep neural networks is the existence of adversarial examples, which can transfer among different architectures. These transferable adversarial examples may severely hinder deep neural network-based applications. Previous works mostly study the transferability using small scale datasets. In this work, we are the first to conduct an extensive study of the transferability over large models and a large scale dataset, and we are also the first to study the transferability of targeted adversarial examples with their target labels. We study both non-targeted and targeted adversarial examples, and show that while transferable non-targeted adversarial examples are easy to find, targeted adversarial examples generated using existing approaches almost never transfer with their target labels. Therefore, we propose novel ensemble-based approaches to generating transferable adversarial examples. Using such approaches, we observe a large proportion of targeted adversarial examples that are able to transfer with their target labels for the first time. We also present some geometric studies to help understanding the transferable adversarial examples. Finally, we show that the adversarial examples generated using ensemble-based approaches can successfully attack Clarifai.com, which is a black-box image classification system.
Adversarial Example Defenses: Ensembles of Weak Defenses are not Strong
(2017)

Ongoing research has proposed several methods to defend neural networks against adversarial examples, many of which researchers have shown to be ineffective. We ask whether a strong defense can be created by combining multiple (possibly weak) defenses. To answer this question, we study three defenses that follow this approach. Two of these are recently proposed defenses that intentionally combine components designed to work well together. A third defense combines three independent defenses. For all the components of these defenses and the combined defenses themselves, we show that an adaptive adversary can create adversarial examples successfully with low distortion. Thus, our work implies that ensemble of weak defenses is not sufficient to provide strong defense against adversarial examples.
Control of microglial neurotoxicity by the fractalkine receptor
(2006)

Microglia, the resident inflammatory cells of the CNS, are the only CNS cells that express the fractalkine receptor (CX3CR1). Using three different in vivo models, we show that CX3CR1 deficiency dysregulates microglial responses, resulting in neurotoxicity. Following peripheral lipopolysaccharide injections, Cx3cr1−/− mice showed cell-autonomous microglial neurotoxicity. In a toxic model of Parkinson disease and a transgenic model of amyotrophic lateral sclerosis, Cx3cr1−/− mice showed more extensive neuronal cell loss than Cx3cr1+ littermate controls. Augmenting CX3CR1 signaling may protect against microglial neurotoxicity, whereas CNS penetration by pharmaceutical CX3CR1 antagonists could increase neuronal vulnerability.
A valid two-item food security questionnaire for screening HIV-1 infected patients in a clinical setting.
(2009)

OBJECTIVE
To validate a two-item food security questionnaire (FSQ) for use in a clinical setting to screen HIV-1 infected patients for food insecurity.


DESIGN
The present study was a questionnaire-based survey of forty-nine subjects attending an HIV clinic. Subjects completed a two-item questionnaire and a six-item validated FSQ contemporaneously.


RESULTS
A strong correlation was found between the two-item and six-item FSQ (rho = 0.895; 95 % CI 0.821, 0.940; P < 0.0001). Cronbach's alpha coefficient was found to be 0.94 and 0.90 for the two-item and six-item FSQ, respectively. The two-item FSQ yielded a sensitivity of 100 % (95 % CI 75, 100) and a specificity of 78 % (95 % CI 61, 90). The negative predictive value was found to be 100 % (95 % CI 88, 100).


CONCLUSIONS
The results of the present study suggest that the two-item FSQ is a valid, reliable and sensitive screening tool of food insecurity in people living with HIV in a clinical setting.
Clinical Information Extraction via Convolutional Neural Network
(2016)

We report an implementation of a clinical information extraction tool that leverages deep neural network to annotate event spans and their attributes from raw clinical notes and pathology reports. Our approach uses context words and their part-of-speech tags and shape information as features. Then we hire temporal (1D) con-volutional neural network to learn hidden feature representations. Finally, we use Multilayer Perceptron (MLP) to predict event spans. The empirical evaluation demonstrates that our approach significantly outperforms baselines.
Affordable Self Driving Cars and Robots with Semantic Segmentation
(2017)

Image semantic segmentation is of immense interest for self-driving car research. Accurate and efficient segmentation mechanisms are required. We have evaluated Intersection over Union (IoU) metric over Cityscapes and KITTI datasets. We designed baseline softmax regression and maximum likelihood estimation, which performs quite poorly for the image segmentation task. We ran fully convolutional networks (FCN), which performed almost perfectly over the KITTI dataset. We found overfitting problem for the more complex Cityscape dataset. We conducted several experiments with regularization, dropout, data augmentation, image scaling and newer architectures. We are able to successfully mitigate overfitting by data augmentation. We also generated a confusion matrix and conducted error ablative analysis to get a deeper understanding of FCNs.
Genetic process mining: an experimental evaluation
(2006)

One of the aims of process mining is to retrieve a process model from an event log. The discovered models can be used as objective starting points during the deployment of process-aware information systems (Dumas et al., eds., Process-Aware Information Systems: Bridging People and Software Through Process Technology. Wiley, New York, 2005) and/or as a feedback mechanism to check prescribed models against enacted ones. However, current techniques have problems when mining processes that contain non-trivial constructs and/or when dealing with the presence of noise in the logs. Most of the problems happen because many current techniques are based on local information in the event log. To overcome these problems, we try to use genetic algorithms to mine process models. The main motivation is to benefit from the global search performed by this kind of algorithms. The non-trivial constructs are tackled by choosing an internal representation that supports them. The problem of noise is naturally tackled by the genetic algorithm because, per definition, these algorithms are robust to noise. The main challenge in a genetic approach is the definition of a good fitness measure because it guides the global search performed by the genetic algorithm. This paper explains how the genetic algorithm works. Experiments with synthetic and real-life logs show that the fitness measure indeed leads to the mining of process models that are complete (can reproduce all the behavior in the log) and precise (do not allow for extra behavior that cannot be derived from the event log). The genetic algorithm is implemented as a plug-in in the ProM framework.
Joint Spatial Division and Multiplexing: Opportunistic Beamforming, User Grouping and Simplified Downlink Scheduling
(2014)

Joint Spatial Division and Multiplexing (JSDM) is a downlink multiuser MIMO scheme recently proposed by the authors in order to enable “massive MIMO” gains and simplified system operations for Frequency Division Duplexing (FDD) systems. The key idea lies in partitioning the users into groups with approximately similar channel covariance eigenvectors and serving these groups by using two-stage downlink precoding scheme obtained as the concatenation of a pre-beamforming matrix, that depends only on the channel second-order statistics, with a multiuser MIMO linear precoding matrix, which is a function of the effective channels including pre-beamforming. The role of pre-beamforming is to reduce the dimensionality of the effective channel by exploiting the near-orthogonality of the eigenspaces of the channel covariances of the different user groups. This paper is an extension of our initial work on JSDM, and addresses some important practical issues. First, we focus on the regime of finite number of antennas and large number of users and show that JSDM with simple opportunistic user selection is able to achieve the same scaling law of the system capacity with full channel state information. Next, we consider the large-system regime (both antennas and users growing large) and propose a simple scheme for user grouping in a realistic setting where users have different angles of arrival and angular spreads. Finally, we propose a low-overhead probabilistic scheduling algorithm that selects the users at random with probabilities derived from large-system random matrix analysis. Since only the pre-selected users are required to feedback their channel state information, the proposed scheme realizes important savings in the CSIT feedback.