SoroushVahidi/scidocs huggingface dataset:
Comparative Evaluation of Various MFCC Implementations on the Speaker Verification Task
(2005)

Making no claim of being exhaustive, a review of the most popular MFCC (Mel Frequency Cepstral Coefficients) implementations is made. These differ mainly in the particular approximation of the nonlinear pitch perception of human, the filter bank design, and the compression of the filter bank output. Then, a comparative evaluation of the presented implementations is performed on the task of text-independent speaker verification, by means of the well-known 2001 NIST SRE (speaker recognition evaluation) one-speaker detection database.
Personality, Culture, and System Factors - Impact on Affective Response to Multimedia
(2016)

Whilst affective responses to various forms and genres of multimedia content have been well researched, precious few studies have investigated the combined impact that multimedia system parameters and human factors have on affect. Consequently, in this paper we explore the role that two primordial dimensions of human factors personality and culture in conjunction with system factors frame rate, resolution, and bit rate have on user affect and enjoyment of multimedia presentations. To this end, a two-site, cross-cultural study was undertaken, the results of which produced three predictve models. Personality and Culture traits were shown statistically to represent 5.6% of the variance in positive affect, 13.6% in negative affect and 9.3% in enjoyment. The correlation between affect and enjoyment, was significant. Predictive modeling incorporating human factors showed about 8%, 7% and 9% improvement in predicting positive affect, negative affect and enjoyment respectively when compared to models trained only on system factors. Results and analysis indicate the significant role played by human factors in influencing affect that users experience while watching multimedia.
Enhanced multisensory integration in older adults
(2006)

Information from the different senses is seamlessly integrated by the brain in order to modify our behaviors and enrich our perceptions. It is only through the appropriate binding and integration of information from the different senses that a meaningful and accurate perceptual gestalt can be generated. Although a great deal is known about how such cross-modal interactions influence behavior and perception in the adult, there is little knowledge as to the impact of aging on these multisensory processes. In the current study, we examined the speed of discrimination responses of aged and young individuals to the presentation of visual, auditory or combined visual-auditory stimuli. Although the presentation of multisensory stimuli speeded response times in both groups, the performance gain was significantly greater in the aged. Most strikingly, multisensory stimuli restored response times in the aged to those seen in young subjects to the faster of the two unisensory stimuli (i.e., visual). The current results suggest that despite the decline in sensory processing that accompanies aging, the use of multiple sensory channels may represent an effective compensatory strategy to overcome these unisensory deficits.
Potential Vulnerabilities of Neuronal Reward, Risk, and Decision Mechanisms to Addictive Drugs
(2011)

How do addictive drugs hijack the brain's reward system? This review speculates how normal, physiological reward processes may be affected by addictive drugs. Addictive drugs affect acute responses and plasticity in dopamine neurons and postsynaptic structures. These effects reduce reward discrimination, increase the effects of reward prediction error signals, and enhance neuronal responses to reward-predicting stimuli, which may contribute to compulsion. Addictive drugs steepen neuronal temporal reward discounting and create temporal myopia that impairs the control of drug taking. Tonically enhanced dopamine levels may disturb working memory mechanisms necessary for assessing background rewards and thus may generate inaccurate neuronal reward predictions. Drug-induced working memory deficits may impair neuronal risk signaling, promote risky behaviors, and facilitate preaddictive drug use. Malfunctioning adaptive reward coding may lead to overvaluation of drug rewards. Many of these malfunctions may result in inadequate neuronal decision mechanisms and lead to choices biased toward drug rewards.
Self-Adaptive Anytime Stream Clustering
(2009)

Clustering streaming data requires algorithms which are capable of updating clustering results for the incoming data. As data is constantly arriving, time for processing is limited. Clustering has to be performed in a single pass over the incoming data and within the possibly varying inter-arrival times of the stream. Likewise, memory is limited, making it impossible to store all data. For clustering, we are faced with the challenge of maintaining a current result that can be presented to the user at any given time. In this work, we propose a parameter free algorithm that automatically adapts to the speed of the data stream. It makes best use of the time available under the current constraints to provide a clustering of the objects seen up to that point. Our approach incorporates the age of the objects to reflect the greater importance of more recent data. Moreover, we are capable of detecting concept drift, novelty and outliers in the stream. For efficient and effective handling, we introduce the ClusTree, a compact and self-adaptive index structure for maintaining stream summaries. Our experiments show that our approach is capable of handling a multitude of different stream characteristics for accurate and scalable anytime stream clustering.
Depth-disparity calibration for augmented reality on binocular optical see-through displays
(2015)

We present a study of depth-disparity calibration for augmented reality applications using binocular optical see-through displays. Two techniques were proposed and compared. The "paired-eyes" technique leverages the Panum's fusional area to help viewer find alignment between the virtual and physical objects. The "separate-eyes" technique eliminates the need of binocular fusion and involves using both eyes sequentially to check the virtual-physical object alignment on retinal images. We conducted a user study to measure the calibration results and assess the subjective experience of users with the proposed techniques.
Pattern Recognition and Machine Learning
(2007)

The first € price and the £ and $ price are net prices, subject to local VAT. Prices indicated with * include VAT for books; the €(D) includes 7% for Germany, the €(A) includes 10% for Austria. Prices indicated with ** include VAT for electronic products; 19% for Germany, 20% for Austria. All prices exclusive of carriage charges. Prices and other details are subject to change without notice. All errors and omissions excepted. C. Bishop Pattern Recognition and Machine Learning
Action MACH a spatio-temporal Maximum Average Correlation Height filter for action recognition
(2008)

In this paper we introduce a template-based method for recognizing human actions called action MACH. Our approach is based on a maximum average correlation height (MACH) filter. A common limitation of template-based methods is their inability to generate a single template using a collection of examples. MACH is capable of capturing intra-class variability by synthesizing a single Action MACH filter for a given action class. We generalize the traditional MACH filter to video (3D spatiotemporal volume), and vector valued data. By analyzing the response of the filter in the frequency domain, we avoid the high computational cost commonly incurred in template-based approaches. Vector valued data is analyzed using the Clifford Fourier transform, a generalization of the Fourier transform intended for both scalar and vector-valued data. Finally, we perform an extensive set of experiments and compare our method with some of the most recent approaches in the field by using publicly available datasets, and two new annotated human action datasets which include actions performed in classic feature films and sports broadcast television.
Optimal Brain Damage
(1989)

We have used information-theoretic ideas to derive a class of practical and nearly optimal schemes for adapting the size of a neural network. By removing unimportant weights from a network, several improvements can be expected: better generalization, fewer training examples required, and improved speed of learning and/or classification. The basic idea is to use second-derivative information to make a tradeoff between network complexity and training set error. Experiments confirm the usefulness of the methods on a real-world application.
A new class of upper bounds on the log partition function
(2002)

We introduce a new class of upper bounds on the log partition function of a Markov random field (MRF). This quantity plays an important role in various contexts, including approximating marginal distributions, parameter estimation, combinatorial enumeration, statistical decision theory, and large-deviations bounds. Our derivation is based on concepts from convex duality and information geometry: in particular, it exploits mixtures of distributions in the exponential domain, and the Legendre mapping between exponential and mean parameters. In the special case of convex combinations of tree-structured distributions, we obtain a family of variational problems, similar to the Bethe variational problem, but distinguished by the following desirable properties: i) they are convex, and have a unique global optimum; and ii) the optimum gives an upper bound on the log partition function. This optimum is defined by stationary conditions very similar to those defining fixed points of the sum-product algorithm, or more generally, any local optimum of the Bethe variational problem. As with sum-product fixed points, the elements of the optimizing argument can be used as approximations to the marginals of the original model. The analysis extends naturally to convex combinations of hypertree-structured distributions, thereby establishing links to Kikuchi approximations and variants.
A 3-dimensional sift descriptor and its application to action recognition
(2007)

In this paper we introduce a 3-dimensional (3D) SIFT descriptor for video or 3D imagery such as MRI data. We also show how this new descriptor is able to better represent the 3D nature of video data in the application of action recognition. This paper will show how 3D SIFT is able to outperform previously used description methods in an elegant and efficient manner. We use a bag of words approach to represent videos, and present a method to discover relationships between spatio-temporal words in order to better describe the video data.
Autotagger: A Model for Predicting Social Tags from Acoustic Features on Large Music Databases
(2008)

Social tags are user-generated keywords associated with some resource on the Web. In the case of music, social tags have become an important component of “Web 2.0” recommender systems, allowing users to generate playlists based on use-dependent terms such as chill or jogging that have been applied to particular songs. In this paper, we propose a method for predicting these social tags directly from MP3 files. Using a set of 360 classifiers trained using the online ensemble learning algorithm FilterBoost, we map audio features onto social tags collected from the Web. The resulting automatic tags (or autotags) furnish information about music that is otherwise untagged or poorly tagged, allowing for insertion of previously unheard music into a social recommender. This avoids the “cold-start problem” common in such systems. Autotags can also be used to smooth the tag space from which similarities and recommendations are made by providing a set of comparable baseline tags for all tracks in a recommender system. Because the words we learn are the same as those used by people who label their music collections, it is easy to integrate our predictions into existing similarity and prediction methods based on web data.
Does Your Model Know the Digit 6 Is Not a Cat? A Less Biased Evaluation of "Outlier" Detectors
(2018)

In the real world, a learning system could receive an input that looks nothing like anything it has seen during training, and this can lead to unpredictable behaviour. We thus need to know whether any given input belongs to the population distribution of the training data to prevent unpredictable behaviour in deployed systems. A recent surge of interest on this problem has led to the development of sophisticated techniques in the deep learning literature. However, due to the absence of a standardized problem formulation or an exhaustive evaluation, it is not evident if we can rely on these methods in practice. What makes this problem different from a typical supervised learning setting is that we cannot model the diversity of out-of-distribution samples in practice. The distribution of outliers used in training may not be the same as the distribution of outliers encountered in the application. Therefore, classical approaches that learn inliers vs. outliers with only two datasets can yield optimistic results. We introduce OD-test, a three-dataset evaluation scheme as a practical and more reliable strategy to assess progress on this problem. The OD-test benchmark provides a straightforward means of comparison for methods that address the out-of-distribution sample detection problem. We present an exhaustive evaluation of a broad set of methods from related areas on image classification tasks. Furthermore, we show that for realistic applications of high-dimensional images, the existing methods have low accuracy. Our analysis reveals areas of strength and weakness of each method.
Autonomous Object Manipulation Using a Soft Planar Grasping Manipulator
(2015)

This article presents the development of an autonomous motion planning algorithm for a soft planar grasping manipulator capable of grasp-and-place operations by encapsulation with uncertainty in the position and shape of the object. The end effector of the soft manipulator is fabricated in one piece without weakening seams using lost-wax casting instead of the commonly used multilayer lamination process. The soft manipulation system can grasp randomly positioned objects within its reachable envelope and move them to a desired location without human intervention. The autonomous planning system leverages the compliance and continuum bending of the soft grasping manipulator to achieve repeatable grasps in the presence of uncertainty. A suite of experiments is presented that demonstrates the system's capabilities.
Fetal left brachiocephalic vein in normal and abnormal conditions.
(2012)

OBJECTIVES
To establish values of fetal left brachiocephalic vein (LBCV) dimensions during normal pregnancy and determine whether routine assessment of the LBCV may help in identifying fetuses with congenital abnormalities of this vessel.


METHODS
Fetal LBCV was assessed prospectively during ultrasound examinations in 431 normal singleton pregnancies. The visualization rate of the transverse view of the upper fetal chest at the level of drainage of the LBCV into the superior vena cava (SVC) by two-dimensional (2D) and 2D plus color Doppler ultrasound was evaluated. Reference ranges of LBCV diameter during non-complicated pregnancies were established. Interobserver and intraobserver measurement variability was analyzed. In addition, a retrospective review of the hospital medical records of 91 pregnancies with fetuses diagnosed with LBCV abnormalities was performed.


RESULTS
Sonographic assessment of the fetal LBCV was consistently achieved in the second and third trimesters and in some fetuses in the first trimester of pregnancy. In normal fetuses LBCV diameter increased significantly throughout pregnancy, with a mean value of 0.7 mm at 11 weeks and 4.9 mm at term. Dilation of the fetal LBCV was noted in five cases of intracranial arteriovenous malformation and six cases of supracardiac type total anomalous pulmonary venous connection. Abnormal course of the LBCV was noted in 12 fetuses. In 63 fetuses with a persistent left SVC and a right SVC the LBCV was absent.


CONCLUSION
This is the first study describing an effective sonographic approach for the assessment of fetal LBCV dimensions during pregnancy. The normative data may provide an additional means of detecting rare anomalies of systemic and pulmonary veins during pregnancy.
Anticipative Interaction Primitives for Human-Robot Collaboration
(2016)

This paper introduces our initial investigation on the problem of providing a semi-autonomous robot collaborator with anticipative capabilities to predict human actions. Anticipative robot behavior is a desired characteristic of robot collaborators that lead to fluid, proactive interactions. We are particularly interested in improving reactive methods that rely on human action recognition to activate the corresponding robot action. Action recognition invariably causes delay in the robot’s response, and the goal of our method is to eliminate this delay by predicting the next human action. Prediction is achieved by using a lookup table containing variations of assembly sequences, previously demonstrated by different users. The method uses the nearest neighbor sequence in the table that matches the actual sequence of human actions. At the movement level, our method uses a probabilistic representation of interaction primitives to generate robot trajectories. The method is demonstrated using a 7 degree-offreedom lightweight arm equipped with a 5-finger hand on an assembly task consisting of 17 steps.
The Missing Link of Jewish European Ancestry: Contrasting the Rhineland and
the Khazarian Hypotheses
(2013)

The question of Jewish ancestry has been the subject of controversy for over two centuries and has yet to be resolved. The "Rhineland hypothesis" depicts Eastern European Jews as a "population isolate" that emerged from a small group of German Jews who migrated eastward and expanded rapidly. Alternatively, the "Khazarian hypothesis" suggests that Eastern European Jews descended from the Khazars, an amalgam of Turkic clans that settled the Caucasus in the early centuries CE and converted to Judaism in the 8th century. Mesopotamian and Greco-Roman Jews continuously reinforced the Judaized empire until the 13th century. Following the collapse of their empire, the Judeo-Khazars fled to Eastern Europe. The rise of European Jewry is therefore explained by the contribution of the Judeo-Khazars. Thus far, however, the Khazars' contribution has been estimated only empirically, as the absence of genome-wide data from Caucasus populations precluded testing the Khazarian hypothesis. Recent sequencing of modern Caucasus populations prompted us to revisit the Khazarian hypothesis and compare it with the Rhineland hypothesis. We applied a wide range of population genetic analyses to compare these two hypotheses. Our findings support the Khazarian hypothesis and portray the European Jewish genome as a mosaic of Near Eastern-Caucasus, European, and Semitic ancestries, thereby consolidating previous contradictory reports of Jewish ancestry. We further describe a major difference among Caucasus populations explained by the early presence of Judeans in the Southern and Central Caucasus. Our results have important implications for the demographic forces that shaped the genetic diversity in the Caucasus and for medical studies.
Energy efficient wearable sensor node for IoT-based fall detection systems
(2018)

Falls can cause serious traumas such as brain injuries and bone fractures, especially among elderly people. Fear of falling might reduce physical activities resulting in declining social interactions and eventually causing depression. To lessen the effects of a fall, timely delivery of medical treatment can play a vital role. In a similar scenario, an IoT-based wearable system can pave the most promising way to mitigate serious consequences of a fall while providing the convenience of usage. However, to deliver sufficient degree of monitoring and reliability, wearable devices working at the core of fall detection systems are required to work for a prolonged period of time. In this work, we focus on energy efficiency of a wearable sensor node in an Internet-of-Things (IoT) based fall detection system. We propose the design of a tiny, lightweight, flexible and energy efficient wearable device. We investigate different parameters (e.g. sampling rate, communication bus interface, transmission protocol, and transmission rate) impacting on energy consumption of the wearable device. In addition, we provide a comprehensive analysis of energy consumption of the wearable in different configurations and operating conditions. Furthermore, we provide hints (hardware and software) for system designers implementing the optimal wearable device for IoT-based fall detection systems in terms of energy efficiency and high quality of service. The results clearly indicate that the proposed sensor node is novel and energy efficient. In a critical condition, the wearable device can be used continuously for 76 h with a 1000 mAh li-ion battery.
Predicting function from sequence in venom peptide families
(2014)

Toxins from animal venoms are small peptides that recognize specific molecular targets in the brains of prey or predators. Next generation sequencing has uncovered thousands of diverse toxin sequences, but the functions of these peptides are poorly understood. Here we demonstrate that the use of machine learning techniques on sequence-derived features enables high accuracy in the task of predicting a toxin’s functionality using only its amino acid sequence. Comparison of the performance of several learning algorithms in this prediction task demonstrates that both physiochemical properties of the amino acid residues in a sequence as well as noncontiguous sequence motifs can be used independently to model the sequence dependence of venom function. We rationalize the observed model performance using unsupervised learning and make broad predictions about the distribution of toxin functions in the venome. Keywords—Bioinformatics, machine learning, protein function prediction, venomics.
ParaPIM: a parallel processing-in-memory accelerator for binary-weight deep neural networks
(2019)

Recent algorithmic progression has brought competitive classification accuracy despite constraining neural networks to binary weights (+1/-1). These findings show remarkable optimization opportunities to eliminate the need for computationally-intensive multiplications, reducing memory access and storage. In this paper, we present ParaPIM architecture, which transforms current Spin Orbit Torque Magnetic Random Access Memory (SOT-MRAM) sub-arrays to massively parallel computational units capable of running inferences for Binary-Weight Deep Neural Networks (BWNNs). ParaPIM's in-situ computing architecture can be leveraged to greatly reduce energy consumption dealing with convolutional layers, accelerate BWNNs inference, eliminate unnecessary off-chip accesses and provide ultra-high internal bandwidth. The device-to-architecture co-simulation results indicate ~4x higher energy efficiency and 7.3x speedup over recent processing-in-DRAM acceleration, or roughly 5x higher energy-efficiency and 20.5x speedup over recent ASIC approaches, while maintaining inference accuracy comparable to baseline designs.