data	Noise level	Method	PearsonR	SpearmanR	Norm Fro N2	Norm inf N2
Tree	1.0	Diffusion Map	0.748 ± 0.125	0.733 ± 0.111	0.113 ± 0.012	0.161 ± 0.019
Tree	1.0	Heat-Geo	0.976 ± 0.019	0.977 ± 0.02	0.092 ± 0.011	0.135 ± 0.018
Tree	1.0	Heat-PHATE	0.918 ± 0.032	0.885 ± 0.04	0.03 ± 0.005	0.044 ± 0.007
Tree	1.0	PHATE	0.671 ± 0.021	0.398 ± 0.052	0.051 ± 0.008	0.084 ± 0.017
Tree	1.0	Rand-Geo	0.926 ± 0.011	0.966 ± 0.019	0.076 ± 0.01	0.117 ± 0.018
Tree	1.0	Shortest Path	0.965 ± 0.026	0.963 ± 0.027	0.039 ± 0.008	0.06 ± 0.008
Tree	1.0	Euclidean	0.508 ± 0.039	0.483 ± 0.052	0.092 ± 0.011	0.138 ± 0.018
Tree	5.0	Diffusion Map	0.656 ± 0.054	0.653 ± 0.057	0.113 ± 0.012	0.161 ± 0.019
Tree	5.0	Heat-Geo	0.822 ± 0.008	0.807 ± 0.016	0.1 ± 0.012	0.146 ± 0.019
Tree	5.0	Heat-PHATE	0.765 ± 0.025	0.751 ± 0.023	0.043 ± 0.006	0.08 ± 0.01
Tree	5.0	PHATE	0.766 ± 0.023	0.743 ± 0.028	0.055 ± 0.007	0.093 ± 0.008
Tree	5.0	Rand-Geo	0.806 ± 0.014	0.795 ± 0.018	0.094 ± 0.011	0.139 ± 0.018
Tree	5.0	Shortest Path	0.78 ± 0.009	0.757 ± 0.019	0.075 ± 0.009	0.117 ± 0.014
Tree	5.0	Euclidean	0.735 ± 0.014	0.704 ± 0.033	0.096 ± 0.011	0.141 ± 0.017
Tree	10.0	Diffusion Map	0.538 ± 0.05	0.471 ± 0.089	0.113 ± 0.012	0.161 ± 0.019
Tree	10.0	Heat-Geo	0.62 ± 0.025	0.59 ± 0.033	0.1 ± 0.012	0.146 ± 0.019
Tree	10.0	Heat-PHATE	0.63 ± 0.018	0.588 ± 0.031	0.046 ± 0.005	0.083 ± 0.012
Tree	10.0	PHATE	0.623 ± 0.016	0.583 ± 0.029	0.07 ± 0.01	0.112 ± 0.017
Tree	10.0	Rand-Geo	0.578 ± 0.043	0.558 ± 0.053	0.095 ± 0.011	0.14 ± 0.018
Tree	10.0	Shortest Path	0.539 ± 0.041	0.513 ± 0.055	0.072 ± 0.01	0.118 ± 0.017
Tree	10.0	Euclidean	0.508 ± 0.039	0.483 ± 0.052	0.092 ± 0.011	0.138 ± 0.018
Tree high	1.0	Diffusion Map	0.754 ± 0.049	0.741 ± 0.057	0.267 ± 0.021	0.369 ± 0.026
Tree high	1.0	Heat-Geo	0.996 ± 0.001	0.999 ± 0.001	0.242 ± 0.02	0.338 ± 0.026
Tree high	1.0	Heat-PHATE	0.927 ± 0.011	0.875 ± 0.032	0.062 ± 0.003	0.084 ± 0.006
Tree high	1.0	PHATE	0.528 ± 0.085	0.141 ± 0.061	0.209 ± 0.023	0.307 ± 0.027
Tree high	1.0	Rand-Geo	0.85 ± 0.014	0.944 ± 0.011	0.227 ± 0.02	0.323 ± 0.025
Tree high	1.0	Shortest Path	0.998 ± 0.001	0.999 ± 0.001	0.009 ± 0.002	0.018 ± 0.005
Tree high	1.0	Euclidean	0.928 ± 0.018	0.928 ± 0.024	0.24 ± 0.02	0.334 ± 0.026
Tree high	5.0	Diffusion Map	0.706 ± 0.124	0.705 ± 0.113	0.267 ± 0.021	0.369 ± 0.026
Tree high	5.0	Heat-Geo	0.97 ± 0.01	0.975 ± 0.009	0.253 ± 0.021	0.353 ± 0.026
Tree high	5.0	Heat-PHATE	0.932 ± 0.022	0.919 ± 0.03	0.072 ± 0.004	0.112 ± 0.008
Tree high	5.0	PHATE	0.913 ± 0.014	0.872 ± 0.034	0.19 ± 0.017	0.278 ± 0.025
Tree high	5.0	Rand-Geo	0.968 ± 0.01	0.971 ± 0.009	0.245 ± 0.019	0.342 ± 0.024
Tree high	5.0	Shortest Path	0.952 ± 0.016	0.95 ± 0.019	0.137 ± 0.017	0.209 ± 0.024
Tree high	5.0	Euclidean	0.882 ± 0.028	0.873 ± 0.032	0.237 ± 0.02	0.333 ± 0.025
Tree high	10.0	Diffusion Map	0.598 ± 0.117	0.613 ± 0.103	0.267 ± 0.021	0.369 ± 0.026
Tree high	10.0	Heat-Geo	0.861 ± 0.039	0.87 ± 0.038	0.254 ± 0.021	0.353 ± 0.026
Tree high	10.0	Heat-PHATE	0.844 ± 0.05	0.838 ± 0.051	0.168 ± 0.015	0.27 ± 0.025
Tree high	10.0	PHATE	0.837 ± 0.052	0.838 ± 0.049	0.204 ± 0.018	0.301 ± 0.024
Tree high	10.0	Rand-Geo	0.845 ± 0.041	0.86 ± 0.038	0.248 ± 0.02	0.346 ± 0.025
Tree high	10.0	Shortest Path	0.779 ± 0.051	0.777 ± 0.054	0.159 ± 0.018	0.257 ± 0.026
Tree high	10.0	Euclidean	0.709 ± 0.054	0.699 ± 0.059	0.229 ± 0.02	0.327 ± 0.026