Package: valer.health
SENAITE LIMS extension for Health care labsIntroductionSENAITE.HEALTH is an extension forSENAITE.LIMSto make it suitable for Health Care
Laboratories, with additional capabilities for the management of patients,
doctors, clinical cases, symptoms, and a lot more.InstallationPlease follow theinstallation instructions for SENAITE LIMSfirst.After SENAITE LIMS is installed, stop the instance and addsenaite.healthinto theeggslist inside the[buildout]section of yourbuildout.cfg:[buildout]
eggs =
    Plone
    Pillow
    senaite.lims
    senaite.healthFor the changes to take effect you need to re-run buildout from your console:$ bin/buildoutStart the instance and login as admin user. Go to Site Setup > Add-ons, select
“SENAITE HEALTH” and press Install.ScreenshotsDashboardAnalysesPatientsCasesAetiologic AgentsContributeWe want contributing to SENAITE.HEALTH to be fun, enjoyable, and educational for
anyone, and everyone. This project adheres to theContributor Covenant.By participating, you are expected to uphold this code. Please report
unacceptable behavior.Contributions go far beyond pull requests and commits. Although we love giving
you the opportunity to put your stamp on SENAITE.HEALTH, we also are thrilled to
receive a variety of other contributions.Please, readContributing to senaite.health document.If you wish to contribute with translations, check the project site onTransifex.Feedback and supportCommunity siteGitter channelUsers listLicenseSENAITE.HEALTHCopyright (C) 2018-2020 RIDING BYTES & NARALABSThis software, henceforth “SENAITE.HEALTH” is an add-on forPlone CMSand is a derivative work of BIKA HEALTH.This program is free software; you can redistribute it and/or modify it under
the terms of theGNU General Public License version 2as published by
the Free Software Foundation.This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.Changelog1.2.5 (unreleased)Fixed#197 Patient’s Date time picker does not translates well to current language1.2.4 (2020-08-11)Added#195 Allow Reference Widget adapters to be exclusive#183 Internal Clients functionality#187 Allow to introduce the Age instead of Date of Birth for PatientFixed#195 Fix Date Validator fails when value is from DateTime/datetime type#193 Hide url in ClientPatientID column when value is empty#182 Prevent Traceback in patients listing when dob is not set#184 Required patient data can be omitted on save causing error on re-edit1.2.3.1 (2020-05-19)Fixed#192 Pin version: senaite.lims 1.3.3.x1.2.3 (2020-04-09)Added#161 Compatibility withsenaite.panicadd-on#166 Better handling of ClientPatientID and Patient fields in Add SampleChanged#163 Cannot override behavior of Patients folder when usingbefore_render#157 Changed Base Catalog ToolRemoved#170 Removal of stale javascripts and cssFixed#180 Fix Patient listings show wrong age#181 Patient historic results are not displayed#172 Fix sporadical errors when contacts do not have a valid email address#168 Cannot create Patient inside Client (content type not allowed)#162 Unable to search by Client Patient ID in Sample Add form#159 EnsureClientcontents allow to holdPatienttypes#158 Fix the filter query in the Add Sample Form1.2.2 (2019-11-07)Added#151 Additional buttons in Batch and Patient add/edit views#134 ReferenceWidget for client searches in Add Patient form#130 Allow to deactivate/activate DoctorsChanged#152 Move Patient inside Client folder when client assigned#149 Removed javascripts from Add Sample form. Use field adapters instead#144 Additional identifiers for Patients ported to senaite.healthRemoved#150 Removed Add button next to Patient and Doctor fields from Add Sample form#148 Removed getClientID, getClientUID, getClientTitle indexers for BatchFixed#143 AttributeError on Patient creation after add-on initially installed#124 Error trying to Edit Analysis Specifications#147 Reindex content structure after install to fix missing icons#146 Move skin layer after the custom layer#142 Client contacts cannot add cases#141 Unable to Deactivate Doctors#137 Client reference widget does not work in Add Patient overlay#133 System clearing patient first name on editing patient#132 Auto-fill Batch field in Sample Add form when Batch defined in request#131 Auto-fill ClientPatientID field in Sample Add form when Patient defined1.2.1 (2019-07-01)Changed#129 Autofill fields from Add Sample depending on the context#120 Remove BatchSearchableText indexer#119 Faster Reference Widget searchesFixed#125 Fix permissions due to global permission changes in core#123 Filtering patient listing is slow1.2.0 (2019-04-09)Added#111 Transifex integrationChanged#118 Make senaite.health to depend on senaite.lims (instead of senaite.core)#116 Compatibility with senaite.core 1.3#110 Added health-specific layerRemoved#120 Removed IBatchSearchableText indexer (senaite.core#1346)#110 Removed z3c.unconfigure dependency#110 Removed taskqueue.collective dependencyFixed#112 Insufficient privileges when “AR add” is clicked inside Patient1.1.3 (2018-10-10)Added#102 Add Primary Referrer column in Doctor listings#85 Allow client contact to list/add/edit Cases from its own Client#83 Allow client contact to create and edit DoctorsChanged#85 New icon setFixed#108 Autodetect suitable client in Doctor’s edit view#109 Tracebackbika_widgets/remarks does not exist for#107 DateTime validator fires even if DateOfBirth is non-mandatory#106 Fields from Patient’s additional tabs are not displayed#105 Date of Birth and Age are required fields for anonymous patients#102 Doctors assigned to other clients are listed when logged as Client#103 All Samples are listed inside Case context#99 Traceback when publishing health results from inside a client#97 Traceback accessing Doctor samples when user is not Manager, LabManager or LabClerk#82 Inconsistent behavior with health’ skins priority over core’s#81 Traceback when importing diseases with setupdata.xlsx1.1.2 (2018-05-05)Added#74 Delay and minLength=2 in Patient’s reference widgetsChanged#70 Index and Metadata optimizations for AR Listing ViewRemoved#77 Remove Dry Matter referencesFixed#75 Patient & Doctor URL values in AR Listing Catalog contain ‘host’ info.#72 Slow searches in patients list#71 Slow Reference Widgets in ‘Add Case’ View#73 Slow Reference Widgets in ‘Add AR’ View#69 Add proper license to repository1.1.1 (2018-04-07)Added#56 Option for making Client Patient IDs unique#63 Display Doctor column in Analysis Requests listingsChanged#48 After Patient creation, redirect to Patient’s Analysis Requests viewFixed#64 Samples not filtered in Doctor’s samples view#52 Date Reported is missing in reports#52 Date Collected is missing in reports#45 ConfigurationConflictError in “The workflow actions menu”#49 Default publication preference for Patients in Clients vocabulary error#44 Traceback on “copy to new” Analysis Request1.1.0 (2018-01-26)Changed#33 #37 bika.lims to senaite.core distribution#39 Improved performance for Patient listingsFixed#39 Traceback on Patients when current user has Client role but is LabContact#36 Using parameter “vocabulary” wasn’t working in bika_setup#35 Analysis Request View error when the page redirects the user#44 Traceback on “copy to new” Analysis Request1.0.0 (2017-11-10)Added#30 Allow Client contacts to create patients#28 Asynchronous creation of Analysis Requests#18 Wildcards on searching in Patients lists#13 Added ‘meta_type’ column in Patient catalog#7 New Analysis Request Add form outside client and patientChanged#27 Remove health’s bika_analysis_workflow.csv and use bika.lims’ one instead#21 Replacement of FileField by BlobField#20 SearchableText index moved to the base dictionary in LIMS#15 Base catalog template definition for indexes and metadata#9 Worksheet performance improvements#6 Added specific catalog for Analysis object types#4 Migration of filter bar definition for ARs and samples, from health to lims#2 Added specific catalog for Analysis Request object typesFixed#32 Can’t search using Client Patient ID in patient listing#31 Can’t search using Client Patient ID in batches listing#29 AttributeError: ‘module’ object has no attribute ‘ViewPatients’#26 CatalogError: unknown sort_on index (Patient)#25 AttributeError on publish: ‘NoneType’ object has no attribute ‘bika_setup’#24 CatalogError in Patients folder view: unknown sort_on index (Title)#23 UnboundLocalError in Samples view: local variable ‘ar’ referenced before assignment#22 Worksheets not displaying analyses#19 Batch View. CatalogError: Unknown sort_on index (BatchID)#17 Unable to create specifications with min/max panic levels#16 ValueError while saving a clinical case: ‘BatchID’ is not in list#14 Analysis Request Submit (AJAX call). KeyError: ‘state’#12 CatalogError: Unknown sort_on index (created) in view.get_sections() from dashboard#11 Error on install: unexpected keyword argument ‘catalog_extensions’#11 Error on install: Can’t pickle BikaPatientCatalog#10 Sort on Patient not working in lists (Analysis Requests, Samples and Patients)#3 Bug during getPatientInfo from AR add view3.2.0.1503-e5a0358 (2016-03-18)Updated to work with BikaLIMS 3.2HEALTH-503: Validation of Date of birthHEALTH-497: Hide Doctor field on EID Case FormHEALTH-357: UI. Post Patient Create landing pageHEALTH-361: VL CasesHEALTH-413: Dashboard not showingHEALTH-402: In Analysis Request Add form, contact doesn’t get selected3.1.8 (2015-11-03)HEALTH-301: Use newer version of Health flow diagram in next releaseHEALTH-281: Error in Bika Setup › Insurance Companies > InvoicesHEALTH-305: Having invoicesHEALTH-370: Worksheet architecture has changed in LIMSHEALTH-269: Analysis Request Add compatibility with LIMS 3.1.9HEALTH-273: Error upgrading to 317HEALTH-270: Error while importing patient with “yearinprefix” disabledHEALTH-271: Analysis request invoice view brokenHEALTH-266: View error on invoice from analysis requestHEALTH-258: Add “File attachment” on Patient3.1.7 (2015-06-09)HEALTH-282: Error loading Add Analysis requestHEALTH-245: Set-up data load. Patient ID conversion, alternativesHEALTH-227: Converting Patient IDs before importHEALTH-228: Load Setup data bugsHEALTH-140: AR Create per path lab standard formHEALTH-251: Add guarantor details in insurance companies3.1.6 (2015-02-27)HEALTH-223: When you are adding a doctor through an overlay (add doctor button in cases), the address widgets don’t work properly.HEALTH-215: Correct Navigation tree orderHEALTH-191: Client Contact permissionsHEALTH-137: Medical Insurance for Patients. Alternative invoice workflowHEALTH-204: Doctor Samples view brokenHEALTH-200: Additional picklists don’t work when creating Patients directly from the Case’s viewHEALTH-136: [+ Add] Patient button on AR Create form.HEALTH-179: “Copy to new” button in AR, doesn’t copy the selected data.HEALTH-197: Health’s results report error.HEALTH-204: Batch.samples error loading pageHEALTH-177: Past Medical History and Drug History’s end date selection error.HEALTH-178: Past Medical History, Travell History and Immunization History data: Impossible to remove the last set of data.HEALTH-208: Incompatibilty with new Bika LIMS’ add site templatesHEALTH-197: Health’s results report errorHEALTH-189: Patient Edit page: After define a country, it is not saved.HEALTH-184: Add Case: Patient Age at Case Onset Date doesn’t get filled after introduce the Onset Date.3.1.5 (2014-10-10)HEALTH-176: Cannot choose a drug from the dropdown list on Patient->allergiesHEALTH-174: Unable to add an AR to a Case (missing Client)HEALTH-163: Cannot be chosen Immunisation items from dropdown list.HEALTH-162: Cannot choose Drug Prohibition ExplanationHEALTH-169: Analyst can’t see Samples site, Admin can.HEALTH-168: Diagnosis ICD widget does not complete from Code, DescriptionHEALTH-161: In Add Patient, after introducing the Birth Date, the patient’s age don’t get filled automatically.HEALTH-157: Patient field is missing in AR add viewsHEALTH-150: Compatibility with the new JS loader machineryHEALTH-164: Editing a patient, location not have to be important on Travel History fieldHEALTH-166: “Patient Age at Case Onset Date” in Add Case cannot be filledHEALTH-172: Anything is displayed on drugs listHEALTH-173: ImmunizationHistory cannot save dataHEALTH-149: Compatibility with the new Bika LIMS reporting subsystemHEALTH-152: Upgrade the test data worksheetHEALTH-145: Health icons not used. And 1 moreHEALTH-152: Upgrade the test data worksheetPlus Bika-LIMS 3.1.5:http://git.io/ogjDuQ3.1.2.1 (2014-08-05)HEALTH-144: Set up data: Identifier Types NameError: global name ‘_id’ is not definedHEALTH-143: Can not create site3.1.2 (2014-07-25)HEALTH-104: Health Setup data failuresHEALTH-28: Health load setup data. Drugs and Treatments did not importHEALTH-105: Case syndromic classifications site eror in setupHEALTH-93: AR. Updating Info portionHEALTH-27: AR Create. Copying Patient fields across does not autocomplete corresponding Name or IDPlus Bika-LIMS 3.1.2 and 3.1.3:http://git.io/MWb4dQ3.1.1 (2014-07-11)HEALTH-122: Client contact cannot open Client page/AR page blankHEALTH-92: Display Patients tab inside Referral Institution (Client)HEALTH-109: Manually adding symptoms saving but remaining on the same pageHEALTH-124: Client contact can access doctors and patients of other clientsHEALTH-121: Client contact gets Insufficient Privileges upon loginHEALTH-133: Case creation: Basal body temperature fields accepting values way out of rangeHEALTH-106: Mimetype text/plain is not allowed in Drug edit viewHEALTH-73: Current and Historic results in PDF sorted in the same orderHEALTH-61: Sort Symptoms table on genderHEALTH-23: No drugs listed in Drugs folderHyperlinks to Analysis Requests in Patient’s Historic Results3.1 Naringenin (2014-06-04)Inherits all features from Bika LIMS release/3.1Customisations towards CLIA complianceIncorrect published results invalidation workflowRegulatory Inspector roleTighter Patient privacy restrictionsLife Threat AlertPublic Results specificationsResults reports inclusion of relevant QC resultsPatient results history graphsSimplified Clinical Case sections for Signs and Symptoms, Patient ConditionStream-lined anonymous Patient workflow0.1 (2012-12-31)Create separate product from the Bika-LIMS/health branch.