Package: pybibget
pybibgetCommand line utility to automatically retrieve BibTeX citations from MathSciNet, arXiv, PubMed and doi.orgInstallation%pipinstallpybibgetUsageCitation Keyspybibgetprovides a command line interface to obtain BibTeX entries from citation keys of the formCitation keyFormatMR0026286MathSciNet (requires subscription)1512.03385arXiv identifier (new format)hep-th/9711200arXiv identifier (old format)PMID:271968PubMed10.1109/CVPR.2016.90DOIpybibget key1 key2 ...prints the BibTeX entriesstdout:%pybibgetMR002628610.1109/TIT.2006.885507math/0211159PMID:27196810.1109/CVPR.2016.9010.4310/ATMP.1998.v2.n2.a1@article{MR0026286,AUTHOR = "Shannon, C. E.",TITLE = "A mathematical theory of communication",JOURNAL = "Bell System Tech. J.",FJOURNAL = "The Bell System Technical Journal",VOLUME = "27",YEAR = "1948",PAGES = "379--423, 623--656",ISSN = "0005-8580",MRCLASS = "60.0X",MRNUMBER = "26286",MRREVIEWER = "J. L. Doob",DOI = "10.1002/j.1538-7305.1948.tb01338.x",URL = "https://doi.org/10.1002/j.1538-7305.1948.tb01338.x"}@article{10.1109/TIT.2006.885507,AUTHOR = "Candes, Emmanuel J. and Tao, Terence",TITLE = "Near-optimal signal recovery from random projections: universal encoding strategies?",JOURNAL = "IEEE Trans. Inform. Theory",FJOURNAL = "Institute of Electrical and Electronics Engineers. Transactions on Information Theory",VOLUME = "52",YEAR = "2006",NUMBER = "12",PAGES = "5406--5425",ISSN = "0018-9448",MRCLASS = "94A12 (41A25 94A13)",MRNUMBER = "2300700",MRREVIEWER = "L. L. Campbell",DOI = "10.1109/TIT.2006.885507",URL = "https://doi.org/10.1109/TIT.2006.885507"}@unpublished{math/0211159,author = "Perelman, Grisha",title = "{The} entropy formula for the {Ricci} flow and its geometric applications",note = "Preprint",year = "2002",eprint = "math/0211159",archiveprefix = "arXiv"}@article{PMID:271968,author = "Sanger, F. and Nicklen, S. and Coulson, A. R.",doi = "10.1073/pnas.74.12.5463",url = "https://doi.org/10.1073/pnas.74.12.5463",year = "1977",publisher = "Proceedings of the National Academy of Sciences",volume = "74",number = "12",pages = "5463--5467",title = "{DNA} sequencing with chain-terminating inhibitors",journal = "Proceedings of the National Academy of Sciences",PMID = "271968"}@inproceedings{10.1109/CVPR.2016.90,author = "He, Kaiming and Zhang, Xiangyu and Ren, Shaoqing and Sun, Jian",doi = "10.1109/cvpr.2016.90",url = "https://doi.org/10.1109/cvpr.2016.90",year = "2016",publisher = "{IEEE}",title = "{Deep} {Residual} {Learning} for {Image} {Recognition}",booktitle = "2016 {IEEE} Conference on Computer Vision and Pattern Recognition ({CVPR})"}@article{10.4310/ATMP.1998.v2.n2.a1,AUTHOR = "Maldacena, Juan",TITLE = "The large {$N$} limit of superconformal field theories and supergravity",JOURNAL = "Adv. Theor. Math. Phys.",FJOURNAL = "Advances in Theoretical and Mathematical Physics",VOLUME = "2",YEAR = "1998",NUMBER = "2",PAGES = "231--252",ISSN = "1095-0761",MRCLASS = "81T30 (81T60 83E30)",MRNUMBER = "1633016",MRREVIEWER = "Douglas J. Smith",DOI = "10.4310/ATMP.1998.v2.n2.a1",URL = "https://doi.org/10.4310/ATMP.1998.v2.n2.a1"}With the option-f filenamethe result can beappendedto any given file directly:%pybibgetMR002628610.1109/TIT.2006.885507math/0211159PMID:27196810.1109/CVPR.2016.9010.4310/ATMP.1998.v2.n2.a1-fbibliography.bibSuccesfully appended 6 BibTeX entries to bibliography.bibTeX File Parsingpybibparseautomatically parses missing citations from thebiberorbibtexlog for a givenTeXfile%pybibparseexample@article{math/0211159,author = "Perelman, Grisha",title = "{The} entropy formula for the {Ricci} flow and its geometric applications",journal = "preprint",year = "2002",eprint = "math/0211159",archiveprefix = "arXiv"}@article{PMID:271968,author = "Sanger, F. and Nicklen, S. and Coulson, A. R.",doi = "10.1073/pnas.74.12.5463",url = "https://doi.org/10.1073/pnas.74.12.5463",year = "1977",publisher = "Proceedings of the National Academy of Sciences",volume = "74",number = "12",pages = "5463--5467",title = "{DNA} sequencing with chain-terminating inhibitors",journal = "Proceedings of the National Academy of Sciences",PMID = "271968"}With the option-w [file_name]the obtained citations are automatically appended to the.bibfile.[file_name]is optional if the.bibfile has been specified in theTeXfile.%pybibparseexample-wSuccesfully appended 2 BibTeX entries to bibliography.bibUpdating existing bibliographiespybibupdate [file.bib]scans an existing.bib-file and searches for entries with updated information onScopus. This functionality requires an API-key which can be obtained fromhttps://dev.elsevier.comData SourcesMathSciNetDirectly accessesMathSciNetand uses the provided citation unmodifiedDOIFirst searches for the DOI onMathSciNet. If successful, uses the MathSciNet strategy, otherwise uses the citation fromdoi.orgwith the following modifications:Author names and title are converted to TeX form (special characters likeöare converted to"{o})Capital words in the title are surrounded by{...}to ensure capitalizationPublication month data is removedPubMedSearches for the DOI onPubMed, then uses the DOI strategy and appendspmid = [PMID]to the resulting citation.arXivUses DOI strategy if metadata containsdoi.
Otherwise creates anunpublishedbib-entry withnote = "Preprint"ornote = [Journal Metadata](if provided). In any-case appendseprint = [arXiv identifier]to the citation.