Saravanan666/pypi-org huggingface dataset:
Package: galaxywitness
GalaxyWitnessPackage for topological data analysis of the big data. It is attempt to study distribution of galaxies in the universe via TDA. Based onGUDHIandAstropyRequirementsPython 3.8+ and pipgit (for development)OS X or LinuxInstallationFor the best experience, use python virtual environment:pip3installvirtualenv
virtualenvenv(orpython3-mvirtualenvgalaxy-witness)../env/bin/activateInstall this package from PyPI viapip install galaxywitnessDocumentationYou can find our technical documentation here:DocsFor developersSphinxgenerates documentation for delelopers from sources in./docsfolder. HTML files of documentation are in./docs/build/htmland you can open it with browser.
If you want to build documentation yourself:cddocs
makehtmlor if you want to get .pdf with documentation:cddocs
makelatexpdfUsageTo run just type:python-mgalaxywitnessIn runtime the program will request you to choose file with your data. This file have to be in folder./dataIf you want to finish a work with package and deactivate virtual environment just type:deactivateDevelopmentYou can use python virtual environment and install dependencies manually:Create and activate a virtual environmentThis will create a new virtual environment called "galaxy-witness":pip3installvirtualenv
virtualenvgalaxy-witness(orpython3-mvirtualenvgalaxy-witness)../galaxy-witness/bin/activateThis will clone the repository "GalaxyWitness" on your local machine, install dependencies and install this package 'galaxywitness':gitclonehttps://github.com/davidosx/GalaxyWitnesscdGalaxyWitness
pipinstall-rrequirements.txt
pythonsetup.pyinstallOr poetry package manager:Poetrygitclonehttps://github.com/davidosx/GalaxyWitnesscdGalaxyWitness
poetryinstallUninstallingFor uninstalling (include dependencies and an virtual environment):rm-rGalaxyWitness
rm-rgalaxy-witness
Package: galaxyxml
These libraries will support building of Tool XML and Tool Dependencies
XML. We’d be happy to support any other XML that Galaxy supports, just
make an issue or PR if you’re feeling motivated.Known Bugsno validation of unique namesrepeats aren’t named properlyconditional/whens aren’t named properlyconditionals not handled in CLILicenseApache License, v2Changelog0.5.2Debugging Build0.5.1Debugging Build0.5.0Added support for toolprofile (@fubar2)Removed default stdio addition (@fubar2)Github Actions (@bernt-matthias)0.4.14Fix for TestRepeats (@fubar2)0.4.13Add TestOutputCollection, TestRepeat and tests (thanks @fubar2)0.4.12Correct the ordering of elements for planemo (thanks @fubar2)Properly read stdio on loading tools (thanks @fubar2)0.4.11Update to command line override (thanks @fubar2)0.4.10Allow overriding of command line in support of positional args (thanks @fubar2)0.4.9Fix quoting of text params (thanks @fubar2!)0.4.8Fix travis deploy processFix testingpy36 only0.4.6Deprecate py2Wrap version command in CDATA0.4.5Bug fixes:Write catched error to logger instead of STDOUTFix Travis: installxmllintFix Travis: Deal with newflake8restrictions for
exceptions0.4.3Bug fixes:Allow<discover_dataset>within<data>in<outputs>Allow import of existing XML with no description0.4.2Add methods to check presence of EDAM and citations (thanks @khillion)0.4.0Add feature to import existing Galaxy xml0.3.3@khillion implemented the
following:<options>with<filter>and<column><container>for<requirements>Started to add<tests>section<section>in<inputs><collection>with<discover_datasets>in<outputs>Please note thattool.parameters.OutputParam()has been
changed totool.parameters.OutputData()0.3.2configfiles
(#8)0.3.0Travis auto-deploys on new tagsTestingp3k0.2.3First widely used/stable version
Package: galaxyxmlfubar
Forked fromhttps://github.com/hexylena/galaxyxmlto work around a PR
blockage.These libraries will support building of Tool XML and Tool Dependencies
XML. We’d be happy to support any other XML that Galaxy supports, just
make an issue or PR if you’re feeling motivated.Known Bugsno validation of unique namesrepeats aren’t named properlyconditional/whens aren’t named properlyconditionals not handled in CLILicenseApache License, v2Changelog0.4.15
- Convert command to XMLParameter so can accept attributes and add profile with default 22.050.4.14Fix for TestRepeats (@fubar2)0.4.13Add TestOutputCollection, TestRepeat and tests (thanks @fubar2)0.4.12Correct the ordering of elements for planemo (thanks @fubar2)Properly read stdio on loading tools (thanks @fubar2)0.4.11Update to command line override (thanks @fubar2)0.4.10Allow overriding of command line in support of positional args (thanks @fubar2)0.4.9Fix quoting of text params (thanks @fubar2!)0.4.8Fix travis deploy processFix testingpy36 only0.4.6Deprecate py2Wrap version command in CDATA0.4.5Bug fixes:Write catched error to logger instead of STDOUTFix Travis: installxmllintFix Travis: Deal with newflake8restrictions for
exceptions0.4.3Bug fixes:Allow<discover_dataset>within<data>in<outputs>Allow import of existing XML with no description0.4.2Add methods to check presence of EDAM and citations (thanks @khillion)0.4.0Add feature to import existing Galaxy xml0.3.3@khillion implemented the
following:<options>with<filter>and<column><container>for<requirements>Started to add<tests>section<section>in<inputs><collection>with<discover_datasets>in<outputs>Please note thattool.parameters.OutputParam()has been
changed totool.parameters.OutputData()0.3.2configfiles
(#8)0.3.0Travis auto-deploys on new tagsTestingp3k0.2.3First widely used/stable version
Package: galbi
GalbiLess important configuration management system.InstallationRequiresPython 3.6 +GitHub personal access token:https://github.com/settings/tokensInstallRecommend to usepipxto install command line interface in isolated
environment.$pipinstallpipx$pipxinstallgalbiInitialize configuration$galbiinitGitHub repo: ...Your GitHub personal access token: ...Initialize galbi.MigrationIn galbi 1.0, we changes a way to store a configuration.
Before 1.0, galbi get a latest comment of issue to get body.
But from galbi 1.0, It stores data in body of issue.So If you use galbi under 1.0 version, You need to migrate your configuration.$ galbi migrate
Are you sure you want to migrate galbi 0.2 to 1.0? [y/N]:migratecommand help you to migrate configurations.How to deploy key?It uploads JSON to reposotory's issue.$galbideploysomething.json...JSON key should be a title and label of issue.JSON value stored in body of the issue, and leaves a comment of the issue
as well.
If someone deploy the same JSON key, value pair, It updates a body and
comment again.Issue's comment is change log of configuration.For deploying a single configuration, It supportsdeploy-keycommand.$galbideploy-key-kfoo-vbar...How to get key?$ galbi get --key foo --key bar
{
    "foo": ...,
    "bar": ...,
}To get specific changes of configuration, you can useget-revcommand.$ galbi get-rev -k foo -r 0
...Note that galbi only get a configuration from an opened issue.
If you want to deprecate/remove the configuration, close the issue.
Package: galcheat
Main documentation|Getting started|CLI|API|Contributing|LicenseTiny package containing useful parameters from main galaxy surveys (with units).The goal of this project is to provide a Python library with minimal dependencies that centralises galaxy survey properties with adequate reference. Such information tends to be scattered in many places or is often copy/pasted without all of the relevant information like units or sources.The current parameters and the corresponding units are specified in thedocumentationGetting startedInstall the latest version of the librarypipinstall-UgalcheatCLIPrint the available surveys and associated filtersgalcheatOptions-s <survey>: print information for a given survey--refs: print the source for each parameter-h, --help: get helpExamplesgalcheat-sLSST# LSST infogalcheat--refs# all surveys info with refsgalcheat--refs-sHSC# HSC info with refsAPIimportgalcheat# Start with the list of available surveysgalcheat.available_surveys# Retrieve a Survey instanceLSST=galcheat.get_survey("LSST")# List the available survey filtersLSST.available_filters# Pick a Filter instanceu_band=LSST.get_filter("u")# Both Survey and Filter objects have physical attributesLSST.mirror_diameteru_band.full_exposure_time# These attributes are Astropy Quantity objects# whose value can be retrieved in any desired unitu_band.psf_fwhm.to_value('arcmin')Contributing ✨This project was started in the context of theBlendingToolKit (BTK)andWeakLensingDeblendingprojects and has received contributions from these wonderful people (emoji key):Alexandre Boucaud💻🤔🚧👀mpaillassa💻👀🔣Ismael Mendoza🤔👀🔣Hironao Miyatake💻🔣Axel Guinot🔣thuiop🤔Rémy Joseph🤔This project follows theall-contributorsspecification.A number is missing? An error slipped into the files? A survey is not included in the list and you can provide the relevant information or some of it?Contributions of any kind are welcome! Head over to thecontributing guidelinesto learn how to participate into making this library more robust and complete.LicenseThis project is developed under an MIT-license. SeeLICENSE filefor more information.
Package: gale
Gale=========Gale is just TornadoInstallation---------$ pip install galeAsynchrous HTTP Request----------###Getimport galedef handle(response):print response.bodygale.stop()gale.get('http://httpbin.org/ip', callback=handle)gale.start()###Postgale.post('http://httpbin.org/post', data={'a':1}, callback=handle)gale.start()###Proxy and Cookiesgale.get('http://httpbin.org/get',params={'a':1, 'b':2},proxy='user:pass@8.8.8.8:80',cookies={'token': 'asdfgh'}, callback=handle)gale.start()###Sleepdef do_after_3_seconds():print 'hello'gale.stop()gale.sleep(3, callback=do_after_3_second)gale.start()Task----------def all_done():print 'all requests complete!'gale.stop()task = gale.Task()task.add(gale.get, 'http://httpbin.org/ip', callback=handle)task.add(gale.get, 'http://httpbin.org/get', callback=handle)task.add(gale.post, 'http://httpbin.org/post', data={'a': 1},callback=handle)#or you can patch the gale.get function#get = task.patch(gale.get)#get('http://httpbin.org/ip', callback=handle)#get('http://httpbin.org/get', callback=handle)#get('http://httpbin.org/post', data={'a': 1},#        callback=handle)task.run(all_done)gale.start()
Package: galen
GalenThe name of the project comes from  League of Legends.
Now galen is a common tool libraryInstallationpipinstallgalenExamplesCookie toolsfromgalen.spider.cookiesimportformat_cookiescookies='aliyungf_tc=AQAAAOgxCHX0LwkAkKfqerDgQpnJBr44; csrfToken=LrCpyhAqhvA9d-R2PKLn84TG;'print(format_cookies(cookies))Changelogsversionrelease notes0.1.4add core module0.1.3add example0.1.2add markdown0.1.1project init cookie split function
Package: galenpy
Porting of the Galen Framework API to Python.This project is a porting theGalen
FrameworkJava API to the Python
language.The Python Galen API is made out of three parts. An example of usage is
shown below.Galen Remote WebDriverdriver=GalenRemoteWebDriver("http://localhost:4444/wd/hub",desired_capabilities=DesiredCapabilities.CHROME)As explained above the API also expose a version of RemoteWebDriver API.Check Layout APIGalen().check_layout(driver,"specs/"+specs,included_tags,excluded_tags)This part of the API resemble closely the checkLayout() method as it is
defined in the Java GalenApi class.Hierarchical reports fluent APITestReport("A galenpy test").add_report_node(info_node("Running layout check for: "+test_name).with_node(warn_node('this is just an example')).with_node(error_node('to demonstrate reporting'))).add_layout_report_node("check "+specs,check_layout_report).finalize()The example above shows how to build a report in a hierarchical form by
adding report nodes in a fluent interface fashion. After chaining the
various nodes types such as info, warning or layout report, a call to
the method finalize() is done to create a test report that is added to
the list of reports.Generating the reportgenerate_galen_report('target/report')At the end of the Galen Layout validation, the report is generated in
the given folder through the call of another Galen API method.More examplesA separate project showing the usage of galenpy can be found atgalen-sample-py-tests.
Package: galeritas
GaleritasGaleritasis an open library for data visualization.InstallationStable releaseTo install galeritas with pip, run this command in your terminal:pip install galeritasThis is the preferred method to install galeritas, as it will always install the most recent stable release.If you don't havepipinstalled, thisPython installation guidecan guide
you through the process.From sourcesYou can also install from the source by cloning this repository:gitclonegit://github.com/Creditas/galeritascdgaleritas

pythonsetup.pyinstallLicenseThe package is released under theApache License 2.0.
Package: galeshapley
Implementação de uma biblioteca para o algoritmo Gale-ShapleyFork do projeto"matching"deHenry Wildecom modificações na API e inclusões de opções.COMO USARDefinir as listas com elementos que serão pareados e as preferências de cada elemento de cada lista relativas aos elementos da outra lista:fromgaleshapleyimportPlayercomerciantes=[Player(name='Cunha SA'),Player(name='Vieira SA'),Player(name='Lineu SA'),Player(name='Loubach SA'),]influenciadores=[Player(name='Gildárcio'),Player(name='Shigemura'),Player(name='Henrique'),Player(name='Jean'),]cunha,vieira,lineu,loubach=comerciantesgildarcio,shigemura,henrique,jean=influenciadorescunha.set_prefs([gildarcio,shigemura,henrique,jean])vieira.set_prefs([jean,shigemura,gildarcio,henrique])lineu.set_prefs([shigemura,henrique,gildarcio,jean])loubach.set_prefs([shigemura,henrique,gildarcio,jean])gildarcio.set_prefs([cunha,vieira,lineu,loubach])shigemura.set_prefs([loubach,lineu,cunha,vieira])henrique.set_prefs([cunha,loubach,vieira,lineu])jean.set_prefs([vieira,cunha,loubach,lineu])Obter os melhores pares de acordo com o algoritmo:fromgaleshapley.gamesimportStablePairinggame=StablePairing(comerciantes,influenciadores)resultado=game.solve()Obs.:O algoritmo de Gale-Shapley retorna uma das soluções ótimas possíveisREFERÊNCIASGale, David, and Lloyd S. Shapley. "College admissions and the stability of marriage." The American Mathematical Monthly 69.1 (1962): 9-15.Wilde, Henry, Vincent Knight, and Jonathan Gillard. "Matching: A Python library for solving matching games." Journal of Open Source Software 5.48 (2020): 2169.
Package: galfect
GalfectThis is a quick command line tool converting a drama to html.
You can see a quick demo inhttp://liriansu.com/galfectProject name come from ‘galgame effect’.Project source code is hosted onhttps://github.com/LKI/galfectThis is also a project for me to learn html&js.InstallationUse pip to install galfect.pip install galfectThen usegalfect templates/snow_white/white.drama.This would generate an individual repository namedwhite.You can openwhite/index.htmlin your browser to see the result.
Package: galgen
GalGenSimple gallery generator.FeaturesSimpleReliableCustomizableDemoSample gallery can be foundhere.InstallingpipinstallgalgenGetting StartedLet's say we have the following file structure:holidays/
  day1/
    pic1.jpg
    pic2.jpg
    pic3.jpg
    thumnails/
      pic1.jpg
      pic2.jpg
      pic3.jpg
  day2/
    pic1.jpg
    pic2.jpg
    pic3.jpg
    thumnails/
      pic1.jpg
      pic2.jpg
      pic3.jpgTo generate and open your gallery invoke the following:$galgeninitpath/to/holidays
$galgenbuild--openpath/to/holidaysOne or more directories with the pictures are required.Define content of your gallery ingengal-config.ymlCustomize layout inindex.html.j2Rebuild your gallery whenever pictures are added/removed or other changes applied.$galgenbuild--forcepath/to/holidaysThumnailsThumnails are optional. Skip them (for simplicity) or generate manually (for performance).Size of the thumnails is of your choice.Filenames of the thumnails must correspond to the filenames of the full-scale pictures.
Package: galight
=============================
galight - Galaxy shapes of Light.. image::https://badge.fury.io/py/galight.png:target:http://badge.fury.io/py/galight.. image::https://travis-ci.org/dartoon/galight.png?branch=master:target:https://travis-ci.org/dartoon/galightA python package that analyze and model the imaging data of galaxies, QSOs and duals.Installation.. code-block:: bash$ pip install galight --userAlternatively, the package can be installed through github channel:https://github.com/dartoon/galightRequirementsRunninggalightrequires the following packages to be installed.lenstronomyhttps://github.com/sibirrer/lenstronomy <https://github.com/sibirrer/lenstronomy>_astropyhttps://github.com/astropy/astropy <https://github.com/astropy/astropy>_photutilshttps://github.com/astropy/photutils <https://github.com/astropy/photutils>_regionshttps://github.com/astropy/regions <https://github.com/astropy/regions>_
and related ones to be installed...Example notebooksWe have creatednotebooks <https://github.com/dartoon/galight_notebooks>_ to demonstrate how to usegalight. These notebooks demonstrate how to model QSOs and galaxies using 2D Sersic profile and scaled point source, based onlenstronomylenstronomy <https://github.com/sibirrer/lenstronomy>_.Examples including:Modeling a HSC imaged QSO <https://github.com/dartoon/galight_notebooks/blob/master/galight_HSC_QSO.ipynb>_Modeling a HSC imaged dual QSO <https://github.com/dartoon/galight_notebooks/blob/master/galight_HSC_dualAGN.ipynb>_Modeling a HST imaged QSO <https://github.com/dartoon/galight_notebooks/blob/master/galight_HST_QSO.ipynb>_FeaturesThe notebook demonstrates the follwing feature/functions:Search PSF stars through entire field of view, automatically.Cutout the target object and prepare the materials for the modelling.Estimate the background noise level from empty regions.Estimate the global background light and remove.Detecting objects in the cutout stamp and quickly create Sersic keywords (inlenstronomytype) to model them.
Package: galileo-cli
Galileo is a hub for modeling, simulations, and data analysis that functions as a quick and easy portal to cloud resources.  The application streamlines computing infrastructure, saving engineers and researchers weeks of cloud setup time.  Team and station features allow teams to collaborate efficiently by sharing projects and results, flexibly controlling permissions, and easily tracking their model version histories.
The Galileo CLI is an application that utilizes the Galileo SDK to view jobs without a GUI
Package: galileo-db
Galileo DB: Galileo Experiment System DatabaseThis project provides an API to work with the experiment database (edb) of Galileo.
Specifically, it provides the following functionality:Core model of the database (Experiment, Telemetry, NodeInfo, ...)Various bindings to an actual database (sqlite, mysql)Telemetry subscriber to write telemetry into edb.Trace recorderGalileo DB ParametersEnvironment variablesThe Galileo DB project allows the following parameters via environment variables.VariableDefaultDescriptiongalileo_expdb_influxdb_urlhttp://localhost:8086The InfluxDB hostgalileo_expdb_influxdb_tokenmy-tokenThe InfluxDB auth tokengalileo_expdb_influxdb_timeout10000Time waiting for connection to InfluxDBgalileo_expdb_influxdb_orggalileoInfluxDB organizationgalileo_expdb_influxdb_org_idorg-idInfluxDB organizationRun testsTests are located in thetestspackage.To run the InfluxDB tests, you need to be able to connect to a running InfluxDB instance.
Set the connection details via environment variables.
Package: galileo-jupyter
galileo-jupyterTools for analyzing galileo experiments.ConfigurationCreate a$HOME/.galileojpand fill with environment variables that configure the database access to galileo-db.
For example:galileo_expdb_driver=mixed

galileo_expdb_mysql_host=localhost
galileo_expdb_mysql_port=3307
galileo_expdb_mysql_db=galileo
galileo_expdb_mysql_user=galileo
galileo_expdb_mysql_password=mypassword
galileo_expdb_influxdb_url=http://localhost:8086
galileo_expdb_influxdb_token=...
galileo_expdb_influxdb_timeout=10000
galileo_expdb_influxdb_org=galileo
galileo_expdb_influxdb_org_id=...UsageThen you can runfromgalileojp.framesimportMixedExperimentFrameGatewayefg=MixedExperimentFrameGateway.from_env()efg.telemetry('my-exp-id')# returns a dataframe containing the telemetry for the given experiment
Package: galileo-sdk
Galileo is a hub for modeling, simulations, and data analysis that functions as a quick and easy portal to cloud resources.  The application streamlines computing infrastructure, saving engineers and researchers weeks of cloud setup time.  Team and station features allow teams to collaborate efficiently by sharing projects and results, flexibly controlling permissions, and easily tracking their model version histories.The Galileo SDK is an API that allows users to interact with Galileo using a Python script instead of a graphical interface.  Use the SDK to automate processes such as scheduling jobs, automatically deploying jobs, accepting jobs, and accepting members.
Package: galileo-ssi
InstallWith PIP:pipinstallgalileo-ssiFrom the source:pipinstall-e.Usage>>>fromssiimportSSI>>>img=SSI('5126r_cal.pho.cub')>>>img.dataarray([[nan,nan,0.6616845,...,0.01874097,0.02330439,0.01920273],[nan,nan,0.5667658,...,0.64417607,0.64331275,0.62484866],[nan,nan,0.5833956,...,0.64018035,0.6447313,0.6334495],...,[nan,0.78587395,0.796514,...,0.5145454,0.48593405,0.48256457],[1.0838959,0.84181863,0.76158404,...,0.46052158,0.44188383,0.44267857],[5.486526,0.772195,0.7204898,...,nan,nan,nan]],dtype=float32)"Seenotebooksfor more examples.
Package: galini
GALINIContributorsGitHubNameAcknowledgementsFrancesco CecconThis work was funded by an Engineering & Physical Sciences Research Council Research Fellowship [GrantNumber EP/P016871/1]Radu Baltean-LugojanThis work was funded by an Engineering & Physical Sciences Research Council Research Fellowship [GrantNumber EP/P016871/1]Citing GALINIIf you use GALINI in your research, we kindly ask you to reference thepaper.
You may also be interested in thepresentation at INFORMS 2020.@article{ceccon2020galini,
  title={GALINI: An extensible mixed-integer quadratically-constrained optimization solver},
  author={Ceccon, F. and Baltean-Lugojan, R. and Bynum, M. L. and Li, C. and Misener, R.},
  journal={Optimization Online},
  year={2020},
  url={http://www.optimization-online.org/DB_HTML/2021/01/8207.html}
}LicenseCopyright 2020 Francesco CecconLicensed under the Apache License, Version 2.0 (the “License”);
you may not use this file except in compliance with the License.
You may obtain a copy of the License athttp://www.apache.org/licenses/LICENSE-2.0Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an “AS IS” BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.Changelog
Package: galini-io
GALINI IOModule containing io facilities for GALINI.LicenseCopyright 2018 Francesco CecconLicensed under the Apache License, Version 2.0 (the “License”);
you may not use this file except in compliance with the License.
You may obtain a copy of the License athttp://www.apache.org/licenses/LICENSE-2.0Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an “AS IS” BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.ChangelogNextv0.2.0Add Brand & Bound messagesv0.1.0Initial Release