SantiagoSanchezF/mgnify_study_descriptions huggingface dataset:
EMG produced TPA metagenomics assembly of the Marine microbial communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - Knorr_S7_td_Bottom_ad_4513_LV_A metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA375451.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365264.  This project includes samples from the following biomes: Environmental, Aquatic, Estuary.

Biome: root:Environmental:Aquatic:Estuary
EMG produced TPA metagenomics assembly of the Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365256.  This project includes samples from the following biomes: Environmental, Aquatic, Estuary.

Biome: root:Environmental:Aquatic:Estuary
EMG produced TPA metagenomics assembly of the Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365260.  This project includes samples from the following biomes: Environmental, Aquatic, Estuary.

Biome: root:Environmental:Aquatic:Estuary
EMG produced TPA metagenomics assembly of the Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365250.  This project includes samples from the following biomes: Environmental, Aquatic, Estuary.

Biome: root:Environmental:Aquatic:Estuary
EMG produced TPA metagenomics assembly of the Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366971.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_17_M020 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366970.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_08_M0_20 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366969.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366968.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365966.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365962.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365960.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG metagenome (sediment metagenome) data set.

The sediment metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA364777.  This project includes samples from the following biomes: Environmental, Aquatic, Freshwater, Lentic, Sediment.

Biome: root:Environmental:Aquatic:Freshwater:Lentic:Sediment
EMG produced TPA metagenomics assembly of the Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG metagenome (sediment metagenome) data set.

The sediment metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA364776.  This project includes samples from the following biomes: Environmental, Aquatic, Freshwater, Lentic, Sediment.

Biome: root:Environmental:Aquatic:Freshwater:Lentic:Sediment
EMG produced TPA metagenomics assembly of the Hot spring microbial communities from Elkhorn Slough, Monterey Bay, USA - CD6A metagenome (hypersaline lake metagenome) data set.

The hypersaline lake metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA336658.  This project includes samples from the following biomes: Environmental, Aquatic, Thermal springs, Hot (42-90C).

Biome: root:Environmental:Aquatic:Thermal springs:Hot (42-90C)
EMG produced TPA metagenomics assembly of the Marine sediment microbial community from Union City, CA, USA - Pond 1C Sediment 3 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA336785.  This project includes samples from the following biomes: Environmental, Aquatic, Freshwater, Pond, Sediment.

Biome: root:Environmental:Aquatic:Freshwater:Pond:Sediment
EMG produced TPA metagenomics assembly of the Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA336786.  This project includes samples from the following biomes: Environmental, Aquatic, Freshwater, Pond.

Biome: root:Environmental:Aquatic:Freshwater:Pond
EMG produced TPA metagenomics assembly of the Marine microbial community from Union City, CA, USA - Pond 2C Liquid 3 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA336787.  This project includes samples from the following biomes: Environmental, Aquatic, Freshwater, Pond.

Biome: root:Environmental:Aquatic:Freshwater:Pond
EMG produced TPA metagenomics assembly of the Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_80 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330315.  This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Biome: root:Environmental:Aquatic:Marine
EMG produced TPA metagenomics assembly of the Cellulose adapted compost microbial communities from Newby Island Compost Facility, Milpitas, CA, USA - Passage2 60A metagenome (compost metagenome) data set.

The compost metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA366683.  This project includes samples from the following biomes: Engineered, Solid waste, Composting.

Biome: root:Engineered:Solid waste:Composting
EMG produced TPA metagenomics assembly of the Agave microbial communities from Guanajuato, Mexico -  Mg.Sf.rz (plant metagenome) data set.

The plant metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA340600.  This project includes samples from the following biomes: Host-associated, Plants.

Biome: root:Host-associated:Plants
EMG produced TPA metagenomics assembly of the Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_138 metaG metagenome (plant metagenome) data set.

The plant metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA444460.  This project includes samples from the following biomes: Host-associated, Plants.

Biome: root:Host-associated:Plants
EMG produced TPA metagenomics assembly of the Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406787.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406786.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406165.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Mouse cecum microbial communities from Vienna, Austria - Inoculum for glucosamine and mucus D2O microcosms metagenome (mouse gut metagenome) data set.

The mouse gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA375352.  This project includes samples from the following biomes: Host-associated, Mammals, Digestive system, Large intestine, Cecum.

Biome: root:Host-associated:Mammals:Digestive system:Large intestine:Cecum
EMG produced TPA metagenomics assembly of the Mouse cecum microbial communities from Vienna, Austria - Glucosamine amended microcosms incubated with D2O metagenome (mouse gut metagenome) data set.

The mouse gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA375353.  This project includes samples from the following biomes: Host-associated, Mammals, Digestive system, Large intestine, Cecum.

Biome: root:Host-associated:Mammals:Digestive system:Large intestine:Cecum
EMG produced TPA metagenomics assembly of the Metagenome analysis of fecal microbiota from mouse which was promoted longevity, spatial learning and memory (mouse gut metagenome) data set.

The mouse gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJDB1459.  This project includes samples from the following biomes: Host-associated, Mammals, Digestive system, Fecal.

Biome: root:Host-associated:Mammals:Digestive system:Fecal
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406169.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406171.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406173.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406168.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406167.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406164.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406154.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406153.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406151.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406150.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406149.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406147.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406142.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406141.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406145.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406140.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R metagenome (rhizosphere metagenome) data set.

The rhizosphere metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA406139.  This project includes samples from the following biomes: Host-associated, Plants, Rhizosphere.

Biome: root:Host-associated:Plants:Rhizosphere
EMG produced TPA metagenomics assembly of the Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG metagenome (bioreactor metagenome) data set.

The bioreactor metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365239.  This project includes samples from the following biomes: Engineered, Bioreactor.

Biome: root:Engineered:Bioreactor
EMG produced TPA metagenomics assembly of the Metagenome analysis of fecal microbiota from mouse which was promoted longevity, spatial learning and memory (mouse gut metagenome) data set.

The mouse gut metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJDB1462.  This project includes samples from the following biomes: Host-associated, Mammals, Digestive system, Fecal.

Biome: root:Host-associated:Mammals:Digestive system:Fecal
EMG produced TPA metagenomics assembly of the Biogas fermentation microbial communities from Germany - Plant 1 DNA1 metagenome (biogas fermenter metagenome) data set.

The biogas fermenter metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA311382.  This project includes samples from the following biomes: Engineered, Biogas plant, Wet fermentation.

Biome: root:Engineered:Biogas plant:Wet fermentation
EMG produced TPA metagenomics assembly of the Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 Metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA249643.  This project includes samples from the following biomes: Environmental, Aquatic, Marine, Intertidal zone, Oil-contaminated.

Biome: root:Environmental:Aquatic:Marine:Intertidal zone:Oil-contaminated
EMG produced TPA metagenomics assembly of the Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA365270.  This project includes samples from the following biomes: Environmental, Aquatic, Estuary.

Biome: root:Environmental:Aquatic:Estuary
EMG produced TPA metagenomics assembly of the Biogas fermentation microbial communities from Germany - Plant 2 DNA1 metagenome (biogas fermenter metagenome) data set.

The biogas fermenter metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA311380.  This project includes samples from the following biomes: Engineered, Biogas plant, Wet fermentation.

Biome: root:Engineered:Biogas plant:Wet fermentation