OHBM2020: Osprey - Open-source Processing, Reconstruction & Estimation of MRS Data (G. Oeltzschner)
Channel: Georg Oeltzschner
Date: 2020-06-15

Processing and quantitative analysis of magnetic resonance spectroscopy (MRS) data are far from standardized and require interfacing with third-party software. 

Here, I present Osprey, a fully integrated open-source data analysis pipeline for MRS data, with seamless integration of pre-processing, linear-combination modelling, quantification, and data visualization. Osprey combines robust, peer-reviewed data processing methods into a modular workflow.

This software demonstration is part of the 2020 annual meeting of the Organization for Human Brain Mapping (OHBM).

#OHBM2020 #Osprey #magneticresonancespectroscopy

Osprey GitHub repository: https://github.com/schorschinho/osprey
Osprey pre-print: https://www.biorxiv.org/content/10.1101/2020.02.12.944207v2
Linear-combination modelling comparison pre-print: https://www.biorxiv.org/content/10.1101/2020.06.05.136796v1
Osprey support forum at the MRSHub: https://forum.mrshub.org

Follow me on Twitter: https://twitter.com/oeltzschner
... and visit my website: https://www.specfitlab.com