Writing or modifying your own CellProfiler modules [NEUBIAS Academy@Home ] webinar
Channel: NEUBIAS
Date: 24/05/2020

CellProfiler's existing 80+ modules and plugins provide a lot of functionality, but some analyses will always require custom code to execute or to streamline a workflow.
In this webinar, we'll show you how to modify CellProfiler's existing source code to add functionality, and to write your own custom module from scratch.  We will also show how to submit your module to the CellProfiler-plugins repository, so it can be shared with the larger bioimage analysis community.
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Content:

"Introduction and overview", 
"Basic principles of adding to CellProfiler", 00:3:03
"Editing your own copy of CellProfiler", 00:11:40
"CellProfiler module structures, part 1", 00:21:09
"Live-edit a CellProfiler module", 00:28:54
"Intro to the CellProfiler-Plugins repository", 00:53:50
"CellProfiler module structures, part 2", and 00:57:06
"Making your own CellProfiler module", 1:00:52

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Presenter: 

Beth Cimini (presenting) leads the Image Assay Development team at the Broad Institute Imaging Platform.  She is a co-maintainer of CellProfiler and the maintainer of the CellProfiler-plugins repository.
Moderators:

Allen Goodman (moderating) is an engineer at the Broad Institute Imaging Platform, the co-lead developer of CellProfiler, and a CZI Engineering Fellow.

David Stirling (moderating) is a postdoctoral associate from the Image Assay Development team with a background in host-pathogen interactions, interested in microscopy, image analysis and software development.
Rocco d'Antuono is Bioimage Analyst at the Crick Institute, Anna Klemm is Bioimage Analyst at the University of Uppsala.


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Questions and Answers are reported on the Image.sc Forum here, and enable you to ask further questions: 

https://forum.image.sc/t/neubias-academy-home-webinar-writing-or-editing-your-own-cellprofiler-modules-questions-answers/38302


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