1.Multi-Template-Matching in Fiji : Installation and single detections
Channel: Laurent Thomas
Date: 2019-04-24

In this first video tutorial, I show how to install the plugins in Fiji and how to run it for single object detections.

Note : Also tick the IJ-OpenCV update site together with the Multi-Template Matching and make sure to use ImageJ 1.52o or later (not working with 1.52n)

Cite this video using the following DOI:
https://doi.org/10.5281/zenodo.2650171

== Article in BMC Bioinformatics ==
Thomas, L.S.V., Gehrig, J. 
Multi-template matching: a versatile tool for object-localization in microscopy images.  
BMC Bioinformatics 21, 44 (2020). https://doi.org/10.1186/s12859-020-3363-7

== PhD Thesis ==
https://doi.org/10.11588/heidok.00030804
 
== The GitHub repository (Fiji, KNIME, Python implementations) ==
https://github.com/multi-template-matching

== Python package ==
https://pypi.org/project/Multi-Template-Matching/

This work is part of the PhD of Laurent THOMAS under supervision of Jochen GEHRIG at 
Acquifer a division of DITABIS AG
https://www.acquifer.de/

This video tutorial was realised with OBS Studio.