Introduction to Glycoinformatics (2 of 2)
Channel: SIB - Swiss Institute of Bioinformatics
Date: 2022-07-07

This course is an opportunity to update and extend your knowledge of glycoproteins using bioinformatics resources collectively called “glycoinformatics”. We provide an overview of how to deal with the ambiguity of glycan substructure search using a graph-based encoding scheme. Using a tree-logical structure to represent glycans from compositions to fully resolved structures, the semantic model of the GlySTreeM knowledge base allows the structures annotated in GlyConnect  to be queried using SPARQL.
The video was recorded live during the course on May 30, 2022.
Target audience: Any life scientist, from academia or industry: biologists, biochemists, from master students to advanced researchers. 
Speaker: Catherine Hayes, member of the Proteome Informatics Group.
Reference paper: Daponte, V.; Hayes, C.; Mariethoz, J.; Lisacek, F. Dealing with the Ambiguity of Glycan Substructure Search. Molecules 2022, 27(1), 65, 10.3390/molecules27010065 https://doi.org/10.3390/molecules27010065
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Any question about this talk? Contact Frédérique  Frederique.Lisacek@sib.swiss, @GlycomicsExpasy 
This video is available under the creative commons license CC-BY-4.0
https://creativecommons.org/licenses/by/4.0/