TDWG 2022: SYM12 Information extraction from digital specimen images using Artificial Intelligence
Channel: Biodiversity Information Standards TDWG
Date: 07/02/2023

Session Organizers: Vamsi Krishna Kommineni, Friedrich Schiller University Jena, German Centre for Integrative Biodiversity Research (iDiv), Max Planck Institute for Biogeochemistry, Jena, Germany, vamsi.krishna.kommineni@uni-jena.de; Quentin Groom, Meise Botanic Garden, Meise, Belgium, quentin.groom@plantentuinmeise.be; Alexis Joly, INRIA Sophia-Antipolis – ZENITH team, LIRMM, Montpellier, France, alexis.joly@inria.fr; Renato Panda, Ci2, Polytechnic Institute of Tomar, Portugal and CISUC, DEI, University of Coimbra, Portugal, panda@dei.uc.pt; Pierre Bonnet, CIRAD, Umr AMAP, Montpellier, France, pierre.bonnet@cirad.fr; and Jitendra Gaikwad, Friedrich Schiller University Jena, Jena , Germany, jitendra.gaikwad@uni-jena.de

Session Description: https://www.tdwg.org/conferences/2022/session-list/#sym12%20information%20extraction%20from%20digital%20specimen%20images%20using%20artificial%20intelligence

02:51 - 15:40  The Specimen Data Refinery: Using a scientific workflow approach for information extraction. By Laurence Livermore, Paul Brack, Ben Scott, Stian Soiland-Reyes, Oliver Woolland https://doi.org/10.3897/biss.6.93500

16:00 - 29:24  ALICE Software: Machine learning & computer vision for automatic label extraction. By Arianna Salili-James, Ben Scott, Vincent S. Smith https://doi.org/10.3897/biss.6.91443

29:30 - 43:45 Cloud AI: A comparison of specimen image data extraction processes. By Ben Scott https://doi.org/10.3897/biss.6.90951

44:05 - 53:05  When Specimens Become Environmental Traits: Automating data extraction in aerobiology. By Mónica González-Alonso, Jaime Ulayar-Arroyo, Arturo H. Ariño https://doi.org/10.3897/biss.6.94914

55:35 - 01:08:50 Extracting Landmark and Trait Information from Segmented Digital Specimen Images Generated by Artificial Neural Networks. By Yasin Bakış, Bahadır Altıntaş, Xiaojun Wang, M. Maruf, Anuj Karpatne, Henry Bart https://doi.org/10.3897/biss.6.94955

01:08:55 - 01:10:30 Discussion