2.Multi-Template-Matching in Fiji : Multiple object detections
Channel: Laurent Thomas
Date: 2019-04-24

In this second video I show how to use the plugin for multiple object detections explaining the score threshold and maximal overlap parameters.

== Article in BMC Bioinformatics ==
Thomas, L.S.V., Gehrig, J. 
Multi-template matching: a versatile tool for object-localization in microscopy images.  
BMC Bioinformatics 21, 44 (2020). https://doi.org/10.1186/s12859-020-3363-7

== PhD Thesis ==
https://doi.org/10.11588/heidok.00030804

== The GitHub repository (Fiji, KNIME, Python implementations) ==
https://github.com/multi-template-matching

== Python package ==
https://pypi.org/project/Multi-Template-Matching/

Image courtesy: Jakob Gierten (COS, Heidelberg)

Cite this video using the following DOI:
https://doi.org/10.5281/zenodo.2650171

This work is part of the PhD of Laurent THOMAS under supervision of Jochen GEHRIG at 
Acquifer a division of DITABIS AG
https://www.acquifer.de

This video tutorial was realized with OBS Studio.