Reviewerly/exHarmony huggingface dataset:
Quantum clustering and jet reconstruction at the LHC

Clustering is one of the most frequent problems in many domains, in particular, in particle physics where jet reconstruction is central in experimental analyses. Jet clustering at the CERN's Large Hadron Collider (LHC) is computationally expensive and the difficulty of this task will increase with the upcoming High-Luminosity LHC (HL-LHC). In this paper, we study the case in which quantum computing algorithms might improve jet clustering by considering two novel quantum algorithms which may speed up the classical jet clustering algorithms. The first one is a quantum subroutine to compute a Minkowski-based distance between two data points, whereas the second one consists of a quantum circuit to track the maximum into a list of unsorted data. The latter algorithm could be of value beyond particle physics, for instance in statistics. When one or both of these algorithms are implemented into the classical versions of well-known clustering algorithms (K-means, affinity propagation, and ${k}_{T}$-jet) we obtain efficiencies comparable to those of their classical counterparts. Even more, exponential speed-up could be achieved, in the first two algorithms, in data dimensionality and data length when the distance algorithm or the maximum searching algorithm are applied.
European Registry of Materials: global, unique identifiers for (undisclosed) nanomaterials

Management of nanomaterials and nanosafety data needs to operate under the FAIR (findability, accessibility, interoperability, and reusability) principles and this requires a unique, global identifier for each nanomaterial. Existing identifiers may not always be applicable or sufficient to definitively identify the specific nanomaterial used in a particular study, resulting in the use of textual descriptions in research project communications and reporting. To ensure that internal project documentation can later be linked to publicly released data and knowledge for the specific nanomaterials, or even to specific batches and variants of nanomaterials utilised in that project, a new identifier is proposed: the European Registry of Materials Identifier. We here describe the background to this new identifier, including FAIR interoperability as defined by FAIRSharing, identifiers.org, Bioregistry, and the CHEMINF ontology, and show how it complements other identifiers such as CAS numbers and the ongoing efforts to extend the InChI identifier to cover nanomaterials. We provide examples of its use in various H2020-funded nanosafety projects.
Entangling Transmons with Low-Frequency Protected Superconducting Qubits

Novel qubits with intrinsic noise protection constitute a promising route for improving the coherence of quantum information in superconducting circuits. However, many protected superconducting qubits exhibit relatively low transition frequencies, which could make their integration with conventional transmon circuits challenging. In this work, we propose and study a scheme for entangling a tunable transmon with a Cooper-pair parity-protected qubit, a paradigmatic example of a low-frequency protected qubit that stores quantum information in opposite Cooper-pair parity states on a superconducting island. By tuning the external flux on the transmon, we show that noncomputational states can mediate a two-qubit entangling gate that preserves the Cooper-pair parity independent of the detailed pulse sequence. Interestingly, the entangling gate bears similarities to a controlled-phase gate in conventional transmon devices. Hence, our results suggest that standard high-precision gate calibration protocols could be repurposed for operating heterogeneous quantum processors.Received 11 March 2022Accepted 3 August 2022DOI:https://doi.org/10.1103/PRXQuantum.3.030329Published by the American Physical Society under the terms of the Creative Commons Attribution 4.0 International license. Further distribution of this work must maintain attribution to the author(s) and the published article's title, journal citation, and DOI.Published by the American Physical SocietyPhysics Subject Headings (PhySH)Research AreasJosephson effectQuantum information architectures & platformsQuantum information processingQuantum interconnectsSuperconductivityQuantum InformationCondensed Matter, Materials & Applied Physics
Remote entanglement distribution in a quantum network via multinode indistinguishability of photons

Quantum networking relies on entanglement distribution between distant nodes, typically realized by swapping procedures. However, entanglement swapping is a demanding task in practice, mainly because of limited effectiveness of entangled photon sources and Bell-state measurements necessary to realize the process. Here we experimentally activate a remote distribution of two-photon polarization entanglement superseding the need for initial entangled pairs and traditional Bell-state measurements. This alternative procedure is accomplished thanks to the controlled spatial indistinguishability of four independent photons in three separated nodes of the network, which enables us to perform localized product-state measurements in the central node acting as a trigger. This experiment proves that the inherent indistinguishability of identical particles supply promising standards for feasible quantum communication in multinode photonic quantum networks.
Autoencoder-convolutional neural network-based embedding and extraction model for image watermarking

Watermarking consists of embedding in, and later extracting from, a digital cover a design called a watermark to prove the image’s copyright/ownership. In watermarking, the use of deep-learning approaches is extremely beneficial due to their strong learning ability with accurate and superior results. By taking advantage of deep-learning, we designed an autoencoder convolutional neural network (CNN)-based watermarking algorithm to maximize the robustness while ensuring the invisibility of the watermark. A two network model, including embedding and extraction, is introduced to comprehensively analyze the performance of the algorithm. The embedding network architecture is composed of convolutional autoencoders. Initially, CNN is considered to obtain the feature maps from the cover and mark images. Subsequently, the feature maps of the mark and cover are concatenated with the help of the concatenation principle. In the extraction model, block-level transposed convolution and the rectified linear unit algorithm is applied on the extracted features of watermarked and cover images to obtain the hidden mark. Extensive experiments demonstrate that the proposed algorithm has high invisibility and good robustness against several attacks at a low cost. Further, our proposed scheme outperforms other state-of-the-art schemes in terms of robustness with good invisibility.
Reconfigurable Drone System for Transportation of Parcels With Variable Mass and Size

Cargo drones are designed to carry payloads with predefined shape, size, and/or mass. This lack of flexibility requires a fleet of diverse drones tailored to specific cargo dimensions. Here we propose a new reconfigurable drone based on a modular design that adapts to different cargo shapes, sizes, and mass. We also propose a method for the automatic generation of drone configurations and suitable parameters for the flight controller. The parcel becomes the drone's body to which several individual propulsion modules are attached. We demonstrate the use of the reconfigurable hardware and the accompanying software by transporting parcels of different mass and sizes requiring various numbers and propulsion modules' positioning. The experiments are conducted indoors (with a motion capture system) and outdoors (with an RTK-GNSS sensor). The proposed design represents a cheaper and more versatile alternative to the solutions involving several drones for parcel transportation.
Semi-Synchronous Personalized Federated Learning Over Mobile Edge Networks

Personalized Federated Learning (PFL) is a new Federated Learning (FL) approach to address the heterogeneity issue of the datasets generated by distributed user equipments (UEs). However, most existing PFL implementations rely on synchronous training to ensure good convergence performances, which may lead to a serious straggler problem, where the training time is heavily prolonged by the slowest UE. To address this issue, we propose a semi-synchronous PFL algorithm, termed as Semi-Synchronous Personalized FederatedAveraging (PerFedS2), over mobile edge networks. By jointly optimizing the wireless bandwidth allocation and UE scheduling policy, it not only mitigates the straggler problem but also provides convergent training loss guarantees. We derive an upper bound of the convergence rate of PerFedS2 in terms of the number of participants per global round and the number of rounds. On this basis, the bandwidth allocation problem can be solved using analytical solutions and the UE scheduling policy can be obtained by a greedy algorithm. Experimental results verify the effectiveness of PerFedS2 in saving the training time as well as guaranteeing the convergence of training loss, in contrast to synchronous and asynchronous PFL algorithms.
Attention-guided multi-scale deep object detection framework for lymphocyte analysis in IHC histological images

Abstract Tumor-infiltrating lymphocytes are specialized lymphocytes that can detect and kill cancerous cells. Their detection poses many challenges due to significant morphological variations, overlapping occurrence, artifact regions and high-class resemblance between clustered areas and artifacts. In this regard, a Lymphocyte Analysis Framework based on Deep Convolutional neural network (DC-Lym-AF) is proposed to analyze lymphocytes in immunohistochemistry images. The proposed framework comprises (i) pre-processing, (ii) screening phase, (iii) localization phase and (iv) post-processing. In the screening phase, a custom convolutional neural network architecture (lymphocyte dilated network) is developed to screen lymphocytic regions by performing a patch-level classification. This proposed architecture uses dilated convolutions and shortcut connections to capture multi-level variations and ensure reference-based learning. In contrast, the localization phase utilizes an attention-guided multi-scale lymphocyte detector to detect lymphocytes. The proposed detector extracts refined and multi-scale features by exploiting dilated convolutions, attention mechanism and feature pyramid network (FPN) using its custom attention-aware backbone. The proposed DC-Lym-AF shows exemplary performance on the NuClick dataset compared with the existing detection models, with an F-score and precision of 0.84 and 0.83, respectively. We verified the generalizability of our proposed framework by participating in a publically open LYON’19 challenge. Results in terms of detection rate (0.76) and F-score (0.73) suggest that the proposed DC-Lym-AF can effectively detect lymphocytes in immunohistochemistry-stained images collected from different laboratories. In addition, its promising generalization on several datasets implies that it can be turned into a medical diagnostic tool to investigate various histopathological problems. Graphical Abstract
GRETEL: Graph Counterfactual Explanation Evaluation Framework

Machine Learning (ML) systems are a building part of the modern tools which impact our daily life in several application domains. Due to their black-box nature, those systems are hardly adopted in application domains (e.g. health, finance) where understanding the decision process is of paramount importance. Explanation methods were developed to explain how the ML model has taken a specific decision for a given case/instance. Graph Counterfactual Explanations (GCE) is one of the explanation techniques adopted in the Graph Learning domain. The existing works on Graph Counterfactual Explanations diverge mostly in the problem definition, application domain, test data, and evaluation metrics, and most existing works do not compare exhaustively against other counterfactual explanation techniques present in the literature. We present GRETEL, a unified framework to develop and test GCE methods in several settings. GRETEL is a highly extensible evaluation framework which promotes Open Science and the reproducibility of the evaluation by providing a set of well-defined mechanisms to integrate and manage easily: both real and synthetic datasets, ML models, state-of-the-art explanation techniques, and evaluation measures. Lastly, we also show the experiments conducted to integrate and test several existing scenarios (datasets, measures, explainers).
A Multirobot System in an Assisted Home Environment to Support the Elderly in Their Daily Lives

The increasing isolation of the elderly both in their own homes and in care homes has made the problem of caring for elderly people who live alone an urgent priority. This article presents a proposed design for a heterogeneous multirobot system consisting of (i) a small mobile robot to monitor the well-being of elderly people who live alone and suggest activities to keep them positive and active and (ii) a domestic mobile manipulating robot that helps to perform household tasks. The entire system is integrated in an automated home environment (AAL), which also includes a set of low-cost automation sensors, a medical monitoring bracelet and an Android application to propose emotional coaching activities to the person who lives alone. The heterogeneous system uses ROS, IoT technologies, such as Node-RED, and the Home Assistant Platform. Both platforms with the home automation system have been tested over a long period of time and integrated in a real test environment, with good results. The semantic segmentation of the navigation and planning environment in the mobile manipulator for navigation and movement in the manipulation area facilitated the tasks of the later planners. Results about the interactions of users with the applications are presented and the use of artificial intelligence to predict mood is discussed. The experiments support the conclusion that the assistance robot correctly proposes activities, such as calling a relative, exercising, etc., during the day, according to the user's detected emotional state, making this is an innovative proposal aimed at empowering the elderly so that they can be autonomous in their homes and have a good quality of life.
Forecasting COVID-19 cases using time series modeling and association rule mining

The aim of this study was to evaluate the most effective combination of autoregressive integrated moving average (ARIMA), a time series model, and association rule mining (ARM) techniques to identify meaningful prognostic factors and predict the number of cases for efficient COVID-19 crisis management.The 3685 COVID-19 patients admitted at Thailand's first university field hospital following the four waves of infections from March 2020 to August 2021 were analyzed using the autoregressive integrated moving average (ARIMA), its derivative to exogenous variables (ARIMAX), and association rule mining (ARM).The ARIMA (2, 2, 2) model with an optimized parameter set predicted the number of the COVID-19 cases admitted at the hospital with acceptable error scores (R2 = 0.5695, RMSE = 29.7605, MAE = 27.5102). Key features from ARM (symptoms, age, and underlying diseases) were selected to build an ARIMAX (1, 1, 1) model, which yielded better performance in predicting the number of admitted cases (R2 = 0.5695, RMSE = 27.7508, MAE = 23.4642). The association analysis revealed that hospital stays of more than 14 days were related to the healthcare worker patients and the patients presented with underlying diseases. The worsening cases that required referral to the hospital ward were associated with the patients admitted with symptoms, pregnancy, metabolic syndrome, and age greater than 65 years old.This study demonstrated that the ARIMAX model has the potential to predict the number of COVID-19 cases by incorporating the most associated prognostic factors identified by ARM technique to the ARIMA model, which could be used for preparation and optimal management of hospital resources during pandemics.
Clues in Tweets

With its critical role in business and service delivery through mobile devices, SMS (Short Message Service) has long been abused for spamming, which is still on the rise today possibly due to the emergence of A2P bulk messaging. The effort to control SMS spam has been hampered by the lack of up-to-date information about illicit activities. In our research, we proposed a novel solution to collect recent SMS spam data, at a large scale, from Twitter, where users voluntarily report the spam messages they receive. For this purpose, we designed and implemented SpamHunter, an automated pipeline to discover SMS spam reporting tweets and extract message content from the attached screenshots. Leveraging SpamHunter, we collected from Twitter a dataset of 21,918 SMS spam messages in 75 languages, spanning over four years. To our best knowledge, this is the largest SMS spam dataset ever made public. More importantly, SpamHunter enables us to continuously monitor emerging SMS spam messages, which facilitates the ongoing effort to mitigate SMS spamming. We also performed an in-depth measurement study that sheds light on the new trends in the spammer's strategies, infrastructure and spam campaigns. We also utilized our spam SMS data to evaluate the robustness of the spam countermeasures put in place by the SMS ecosystem, including anti-spam services, bulk SMS services, and text messaging apps. Our evaluation shows that such protection cannot effectively handle those spam samples: either introducing significant false positives or missing a large number of newly reported spam messages.
Students’ Mobile Phone Practices for Academic Purposes: Strengthening Post-Pandemic University Digitalization

The COVID-19 pandemic is considered as a turning point that has impacted the digital transformation of higher education. However, the link between students’ mobile phone practices and university digitalization is not sufficiently or explicitly discussed. The purpose of this study is to provide evidence about university students’ mobile phone practices for academic purposes, and to contribute to the debate regarding post-pandemic university digitalization. The participants were 60 students studying in a Greek university, data were collected via an open-ended questionnaire, and descriptive content analysis was used to examine the qualitative data. Students mainly use their mobile phones for information searches (e.g., for assignments, videos, photos, graphs, simulations, online dictionaries, and scientific papers), easy and quick access to e-classes (e.g., course material/slides) and the faculty’s site, and for communication with peers (e.g., queries, sharing educational resources) and tutors. During mobile practices, students experience advantages (easy-quick searches, flexibility, familiarization with digital technology) and disadvantages (internet connectivity, unreliable information sources, distractions). Implications for students, educators, and university policy-organization (policymakers have a role in reshaping digitalization) are discussed. It is argued that mobile learning has the potential to strengthen university digitalization, thus affecting the sustainability of education in the post-pandemic era.
Avatar led interventions in the Metaverse reveal that interpersonal effectiveness can be measured, predicted, and improved

Experiential learning has been known to be an engaging and effective modality for personal and professional development. The Metaverse provides ample opportunities for the creation of environments in which such experiential learning can occur. In this work, we introduce a novel interpersonal effectiveness improvement framework (ELAINE) that combines Artificial Intelligence and Virtual Reality to create a highly immersive and efficient learning experience using avatars. We present findings from a study that uses this framework to measure and improve the interpersonal effectiveness of individuals interacting with an avatar. Results reveal that individuals with deficits in their interpersonal effectiveness show a significant improvement (p < 0.02) after multiple interactions with an avatar. The results also reveal that individuals interact naturally with avatars within this framework, and exhibit similar behavioral traits as they would in the real world. We use this as a basis to analyze the underlying audio and video data streams of individuals during these interactions. We extract relevant features from these data and present a machine-learning based approach to predict interpersonal effectiveness during human-avatar conversation. We conclude by discussing the implications of these findings to build beneficial applications for the real world.
Code smells for machine learning applications

The popularity of machine learning has wildly expanded in recent years. Machine learning techniques have been heatedly studied in academia and applied in the industry to create business value. However, there is a lack of guidelines for code quality in machine learning applications. In particular, code smells have rarely been studied in this domain. Although machine learning code is usually integrated as a small part of an overarching system, it usually plays an important role in its core functionality. Hence ensuring code quality is quintessential to avoid issues in the long run. This paper proposes and identifies a list of 22 machine learning-specific code smells collected from various sources, including papers, grey literature, GitHub commits, and Stack Overflow posts. We pinpoint each smell with a description of its context, potential issues in the long run, and proposed solutions. In addition, we link them to their respective pipeline stage and the evidence from both academic and grey literature. The code smell catalog helps data scientists and developers produce and maintain high-quality machine learning application code.
MORE: Multi-Order RElation Mining for Dense Captioning in 3D Scenes

3D dense captioning is a recently-proposed novel task, where point clouds contain more geometric information than the 2D counterpart. However, it is also more challenging due to the higher complexity and wider variety of inter-object relations contained in point clouds. Existing methods only treat such relations as by-products of object feature learning in graphs without specifically encoding them, which leads to sub-optimal results. In this paper, aiming at improving 3D dense captioning via capturing and utilizing the complex relations in the 3D scene, we propose MORE, a Multi-Order RElation mining model, to support generating more descriptive and comprehensive captions. Technically, our MORE encodes object relations in a progressive manner since complex relations can be deduced from a limited number of basic ones. We first devise a novel Spatial Layout Graph Convolution (SLGC), which semantically encodes several first-order relations as edges of a graph constructed over 3D object proposals. Next, from the resulting graph, we further extract multiple triplets which encapsulate basic first-order relations as the basic unit, and construct several Object-centric Triplet Attention Graphs (OTAG) to infer multi-order relations for every target object. The updated node features from OTAG are aggregated and fed into the caption decoder to provide abundant relational cues, so that captions including diverse relations with context objects can be generated. Extensive experiments on the Scan2Cap dataset prove the effectiveness of our proposed MORE and its components, and we also outperform the current state-of-the-art method. Our code is available at https://github.com/SxJyJay/MORE.