Reviewerly/exHarmony huggingface dataset:
GASTRO-CADx: a three stages framework for diagnosing gastrointestinal diseases

Gastrointestinal (GI) diseases are common illnesses that affect the GI tract. Diagnosing these GI diseases is quite expensive, complicated, and challenging. A computer-aided diagnosis (CADx) system based on deep learning (DL) techniques could considerably lower the examination cost processes and increase the speed and quality of diagnosis. Therefore, this article proposes a CADx system called Gastro-CADx to classify several GI diseases using DL techniques. Gastro-CADx involves three progressive stages. Initially, four different CNNs are used as feature extractors to extract spatial features. Most of the related work based on DL approaches extracted spatial features only. However, in the following phase of Gastro-CADx, features extracted in the first stage are applied to the discrete wavelet transform (DWT) and the discrete cosine transform (DCT). DCT and DWT are used to extract temporal-frequency and spatial-frequency features. Additionally, a feature reduction procedure is performed in this stage. Finally, in the third stage of the Gastro-CADx, several combinations of features are fused in a concatenated manner to inspect the effect of feature combination on the output results of the CADx and select the best-fused feature set. Two datasets referred to as Dataset I and II are utilized to evaluate the performance of Gastro-CADx. Results indicated that Gastro-CADx has achieved an accuracy of 97.3% and 99.7% for Dataset I and II respectively. The results were compared with recent related works. The comparison showed that the proposed approach is capable of classifying GI diseases with higher accuracy compared to other work. Thus, it can be used to reduce medical complications, death-rates, in addition to the cost of treatment. It can also help gastroenterologists in producing more accurate diagnosis while lowering inspection time.
Collective and synchronous dynamics of photonic spiking neurons

Abstract Nonlinear dynamics of spiking neural networks have recently attracted much interest as an approach to understand possible information processing in the brain and apply it to artificial intelligence. Since information can be processed by collective spiking dynamics of neurons, the fine control of spiking dynamics is desirable for neuromorphic devices. Here we show that photonic spiking neurons implemented with paired nonlinear optical oscillators can be controlled to generate two modes of bio-realistic spiking dynamics by changing optical-pump amplitude. When the photonic neurons are coupled in a network, the interaction between them induces an effective change in the pump amplitude depending on the order parameter that characterizes synchronization. The experimental results show that the effective change causes spontaneous modification of the spiking modes and firing rates of clustered neurons, and such collective dynamics can be utilized to realize efficient heuristics for solving NP-hard combinatorial optimization problems.
Efficiently Fusing Pretrained Acoustic and Linguistic Encoders for Low-Resource Speech Recognition

End-to-end models have achieved impressive results on the task of automatic speech recognition (ASR). For low-resource ASR tasks, however, labeled data can hardly satisfy the demand of end-to-end models. Self-supervised acoustic pre-training has already shown its amazing ASR performance, while the transcription is still inadequate for language modeling in end-to-end models. In this work, we fuse a pre-trained acoustic encoder (wav2vec2.0) and a pre-trained linguistic encoder (BERT) into an end-to-end ASR model. The fused model only needs to learn the transfer from speech to language during fine-tuning on limited labeled data. The length of the two modalities is matched by a monotonic attention mechanism without additional parameters. Besides, a fully connected layer is introduced for the hidden mapping between modalities. We further propose a scheduled fine-tuning strategy to preserve and utilize the text context modeling ability of the pre-trained linguistic encoder. Experiments show our effective utilizing of pre-trained modules. Our model achieves better recognition performance on CALLHOME corpus (15 hours) than other end-to-end models.
Computer Vision-Based Microcalcification Detection in Digital Mammograms Using Fully Connected Depthwise Separable Convolutional Neural Network

Microcalcification clusters in mammograms are one of the major signs of breast cancer. However, the detection of microcalcifications from mammograms is a challenging task for radiologists due to their tiny size and scattered location inside a denser breast composition. Automatic CAD systems need to predict breast cancer at the early stages to support clinical work. The intercluster gap, noise between individual MCs, and individual object’s location can affect the classification performance, which may reduce the true-positive rate. In this study, we propose a computer-vision-based FC-DSCNN CAD system for the detection of microcalcification clusters from mammograms and classification into malignant and benign classes. The computer vision method automatically controls the noise and background color contrast and directly detects the MC object from mammograms, which increases the classification performance of the neural network. The breast cancer classification framework has four steps: image preprocessing and augmentation, RGB to grayscale channel transformation, microcalcification region segmentation, and MC ROI classification using FC-DSCNN to predict malignant and benign cases. The proposed method was evaluated on 3568 DDSM and 2885 PINUM mammogram images with automatic feature extraction, obtaining a score of 0.97 with a 2.35 and 0.99 true-positive ratio with 2.45 false positives per image, respectively. Experimental results demonstrated that the performance of the proposed method remains higher than the traditional and previous approaches.
RGB-D Salient Object Detection With Ubiquitous Target Awareness

Conventional RGB-D salient object detection methods aim to leverage depth as complementary information to find the salient regions in both modalities. However, the salient object detection results heavily rely on the quality of captured depth data which sometimes are unavailable. In this work, we make the first attempt to solve the RGB-D salient object detection problem with a novel depth-awareness framework. This framework only relies on RGB data in the testing phase, utilizing captured depth data as supervision for representation learning. To construct our framework as well as achieving accurate salient detection results, we propose a Ubiquitous Target Awareness (UTA) network to solve three important challenges in RGB-D SOD task: 1) a depth awareness module to excavate depth information and to mine ambiguous regions via adaptive depth-error weights, 2) a spatial-aware cross-modal interaction and a channel-aware cross-level interaction, exploiting the low-level boundary cues and amplifying high-level salient channels, and 3) a gated multi-scale predictor module to perceive the object saliency in different contextual scales. Besides its high performance, our proposed UTA network is depth-free for inference and runs in real-time with 43 FPS. Experimental evidence demonstrates that our proposed network not only surpasses the state-of-the-art methods on five public RGB-D SOD benchmarks by a large margin, but also verifies its extensibility on five public RGB SOD benchmarks.
Deep Learning of Histopathology Images at the Single Cell Level

The tumor immune microenvironment (TIME) encompasses many heterogeneous cell types that engage in extensive crosstalk among the cancer, immune, and stromal components. The spatial organization of these different cell types in TIME could be used as biomarkers for predicting drug responses, prognosis and metastasis. Recently, deep learning approaches have been widely used for digital histopathology images for cancer diagnoses and prognoses. Furthermore, some recent approaches have attempted to integrate spatial and molecular omics data to better characterize the TIME. In this review we focus on machine learning-based digital histopathology image analysis methods for characterizing tumor ecosystem. In this review, we will consider three different scales of histopathological analyses that machine learning can operate within: whole slide image (WSI)-level, region of interest (ROI)-level, and cell-level. We will systematically review the various machine learning methods in these three scales with a focus on cell-level analysis. We will provide a perspective of workflow on generating cell-level training data sets using immunohistochemistry markers to "weakly-label" the cell types. We will describe some common steps in the workflow of preparing the data, as well as some limitations of this approach. Finally, we will discuss future opportunities of integrating molecular omics data with digital histopathology images for characterizing tumor ecosystem.
Exploring customers’ attitudes to the adoption of robots in tourism and hospitality

Purpose This study aims to explore the factors affecting customers’ attitudes to the adoption of robots in hotels and travel agencies. Design/methodology/approach Structural equation modelling was used to test the extended technology acceptance model based on data collected from 570 customers of hotels and travel agencies. Findings The findings revealed that hotel customers have more positive attitudes to service robots than their peers in travel agencies. Originality/value This research contributes to the literature on robots in tourism and responds to the call to investigate customers’ attitudes to the adoption of robots in developing countries.
Testing Randomness Online

The hypothesis of randomness is fundamental in statistical machine learning and in many areas of nonparametric statistics; it says that the observations are assumed to be independent and coming from the same unknown probability distribution. This hypothesis is close, in certain respects, to the hypothesis of exchangeability, which postulates that the distribution of the observations is invariant with respect to their permutations. This paper reviews known methods of testing the two hypotheses concentrating on the online mode of testing, when the observations arrive sequentially. All known online methods for testing these hypotheses are based on conformal martingales, which are defined and studied in detail. The paper emphasizes conceptual and practical aspects and states two kinds of results. Validity results limit the probability of a false alarm or the frequency of false alarms for various procedures based on conformal martingales, including conformal versions of the CUSUM and Shiryaev-Roberts procedures. Efficiency results establish connections between randomness, exchangeability, and conformal martingales.
How immersive virtual reality methods may meet the criteria of the National Academy of Neuropsychology and American Academy of Clinical Neuropsychology: A software review of the Virtual Reality Everyday Assessment Lab (VR-EAL)

Clinical tools involving immersive virtual reality (VR) may bring several advantages to cognitive neuroscience and neuropsychology. However, there are some technical and methodological pitfalls. The American Academy of Clinical Neuropsychology (AACN) and the National Academy of Neuropsychology (NAN) raised 8 key issues pertaining to Computerized Neuropsychological Assessment Devices. These issues pertain to: (1) the safety and effectivity; (2) the identity of the end-user; (3) the technical hardware and software features; (4) privacy and data security; (5) the psychometric properties; (6) examinee issues; (7) the use of reporting services; and (8) the reliability of the responses and results. The VR Everyday Assessment Lab (VR-EAL) is the first immersive VR neuropsychological battery with enhanced ecological validity for the assessment of everyday cognitive functions by offering a pleasant testing experience without inducing cybersickness. The VR-EAL meets the criteria of the NAN and AACN, addresses the methodological pitfalls, and brings advantages for neuropsychological testing. However, there are still shortcomings of the VR-EAL, which should be addressed. Future iterations should strive to improve the embodiment illusion in VR-EAL and the creation of an open access VR software library should be attempted. The discussed studies demonstrate the utility of VR methods in cognitive neuroscience and neuropsychology.
Quantum indistinguishability by path identity and with undetected photons

Two photon-pair creation processes can be arranged such that the paths of the emitted photons are identical. Thereby the path information is not erased but is never born in the first place. In addition to its implications for fundamental physics, this concept has recently led to a series of discoveries in the fields of imaging, spectroscopy, and quantum information science. Here we present the idea of path identity and provide a comprehensive review of the recent developments.
Quantum Volume in Practice: What Users Can Expect From NISQ Devices

Quantum volume (QV) has become the de-facto standard benchmark to quantify the capability of Noisy Intermediate-Scale Quantum (NISQ) devices. While QV values are often reported by NISQ providers for their systems, we perform our own series of QV calculations on 24 NISQ devices currently offered by IBM&#x00A0;Q, IonQ, Rigetti, Oxford Quantum Circuits, and Quantinuum (formerly Honeywell). Our approach characterizes the performances that an advanced user of these NISQ devices can expect to achieve with a reasonable amount of optimization, but without white-box access to the device. In particular, we compile QV circuits to standard gate sets of the vendor using compiler optimization routines where available, and we perform experiments across different qubit subsets. We find that running QV tests requires very significant compilation cycles, QV values achieved in our tests typically lag behind officially reported results and also depend significantly on the classical compilation effort invested.
Big Data Privacy in Biomedical Research

Biomedical research often involves studying patient data that contain personal information. Inappropriate use of these data might lead to leakage of sensitive information, which can put patient privacy at risk. The problem of preserving patient privacy has received increasing attentions in the era of big data. Many privacy methods have been developed to protect against various attack models. This paper reviews relevant topics in the context of biomedical research. We discuss privacy preserving technologies related to (1) record linkage, (2) synthetic data generation, and (3) genomic data privacy. We also discuss the ethical implications of big data privacy in biomedicine and present challenges in future research directions for improving data privacy in biomedical research.
Fair comparison of skin detection approaches on publicly available datasets

Skin detection is the process of discriminating skin and non-skin regions in a digital image and it is widely used in several applications ranging from hand gesture analysis to track body parts and face detection. Skin detection is a challenging problem which has drawn extensive attention from the research community in the context of expert and intelligent systems, nevertheless a fair comparison among approaches is very difficult due to the lack of a common benchmark and a unified testing protocol. In the recent era, the success of deep convolutional neural network (CNN) has strongly influenced the field of image segmentation and gave us various successful models to date. Anyway, due to the lack of large ground truth for skin detection only few works have addressed the skin detection problem using CNN models. In this work, we investigate the most recent researches in this field, and we propose a fair comparison among approaches using several different datasets. The major contributions of this work are (i) an exhaustive literature review of skin color detection approaches and a comparison of approaches that can be useful to researchers and practitioners to select the most suitable method for their application, (ii) the collection and examination of many datasets with ground truth for skin detection that can be useful to produce a training set for CNN models, (iii) a framework to evaluate and combine different skin detector approaches, whose source code is made freely available for future research, and (iv) an extensive experimental comparison among several recent methods which have also been used to define an ensemble that works well in many different problems. Experiments are carried out in 10 different datasets including more than 10,000 labelled images: experimental results confirm that the best method here proposed obtains a very good performance with respect to other stand-alone approaches, without requiring ad hoc parameter tuning. A MATLAB version of the framework for testing and of the methods proposed in this paper will be freely available from https://github.com/LorisNanni.
On-demand generation of traveling cat states using a parametric oscillator

We theoretically propose a method for on-demand generation of traveling Schr\"odinger cat states, namely, quantum superpositions of distinct coherent states of traveling fields. This method is based on deterministic generation of intracavity cat states using a Kerr-nonlinear parametric oscillator (KPO) via quantum adiabatic evolution. We show that the cat states generated inside a KPO can be released into an output mode by controlling the parametric pump amplitude dynamically. We further show that the quality of the traveling cat states can be improved by using a shortcut-to-adiabaticity technique.
More Entanglement Implies Higher Performance in Channel Discrimination Tasks

We show that every entangled state provides an advantage in bi- and multi-channel discrimination that singles out its degree of entanglement, quantified in terms of its Schmidt number and of the corresponding robustness measures.
Salient object detection in video using deep non-local neural networks

Detection of salient objects in image and video is of great importance in many computer vision applications. In spite of the fact that the state of the art in saliency detection for still images has been changed substantially over the last few years, there have been few improvements in video saliency detection. This paper investigates the use of recently introduced non-local neural networks in video salient object detection. Non-local neural networks are applied to capture global dependencies and hence determine the salient objects. The effect of non-local operations is studied separately on static and dynamic saliency detection in order to exploit both appearance and motion features. A novel deep non-local neural network architecture is introduced for video salient object detection and tested on two well-known datasets DAVIS and FBMS. The experimental results show that the proposed algorithm outperforms state-of-the-art video saliency detection methods.
Reference pulse attack on continuous variable quantum key distribution with local local oscillator under trusted phase noise

We show that partially trusting the phase noise associated with estimation uncertainty in a local local oscillator continuous-variable quantum key distribution (LLO-CVQKD) system allows one to exchange higher secure key rates than in the case of untrusted phase noise. However, this opens a security loophole through the manipulation of the reference pulse amplitude. We label this as a "reference pulse attack," which is applicable to all LLO-CVQKD systems if the phase noise is trusted. We show that, at the optimal reference pulse intensity level, Eve achieves unity attack efficiency at 23.8 km and 32.0 km while using lossless and 0.14 dB/km loss channels, respectively, for her attack. However, to maintain the performance enhancement from partially trusting the phase noise, countermeasures have been proposed. As a result, the LLO-CVQKD system with partially trusted phase noise owns a superior key rate at 20 km by an order 9.5, and an extended transmission distance by 45%, compared to the phase noise untrusted system.
Comparing Human Factors for Augmented Reality Supported Single-User and Collaborative Repair Operations of Industrial Robots

In order to support the decision-making process of industry on how to implement Augmented Reality (AR) in production, this article wants to provide guidance through a set of comparative user studies. The results are obtained from the feedback of 160 participants who performed the same repair task on a switch cabinet of an industrial robot. The studies compare several AR instruction applications on different display devices (head-mounted display, handheld tablet PC and projection-based spatial AR) with baseline conditions (paper instructions and phone support), both in a single-user and a collaborative setting. Next to insights on the performance of the individual device types for the single mode operation, the study is able to show significant indications on AR techniques are being especially helpful in a collaborative setting.
Wavelet-Based Spectral–Spatial Transforms for CFA-Sampled Raw Camera Image Compression

Spectral-spatial transforms (SSTs) change a raw camera image captured using a color filter array (CFA-sampled image) from an RGB color space composed of red, green, and blue components into a decorrelated color space such as YDgCbCr or YDgCoCg color space composed of luma, difference green, and two chroma components. This paper describes three types of wavelet-based SST (WSST) obtained by reorganizing all of the existing SSTs covered in this paper. First, we introduce three types of macropixel SST (MSST) implemented within each 2×2 macropixel. Next, we focus on 2-channel Haar wavelet transforms, which are simple wavelet transforms, and 3-channel Haar-like wavelet transforms in each MSST and replace the Haar and Haar-like wavelet transforms with Cohen-Daubechies-Feauveau (CDF) 5/3 and 9/7 wavelet transforms, which are customized on the basis of the original pixel positions in two-dimensional (2D) space. Although the test data set is not big, in lossless CFA-sampled image compression based on JPEG 2000, the WSSTs improve the bitrates by about 1.67 to 3.17 % compared with not using a transform and the WSSTs that use 5/3 wavelet transforms improve the bitrates by about 0.31 to 0.71 % compared with the best existing SST. Moreover, in lossy CFA-sampled image compression based on JPEG 2000, the WSSTs show about 2.25 to 4.40 dB and 26.04 to 49.35 % in the Bjýntegaard metrics (BD-PSNRs and BD-rates) compared with not using a transform and the WSSTs that use 9/7 wavelet transforms improve the metrics by about 0.13 to 0.40 dB and 2.27 to 4.80 % compared with the best existing SST.
A Comparable Study of CNN-Based Single Image Super-Resolution for Space-Based Imaging Sensors

In the case of space-based space surveillance (SBSS), images of the target space objects captured by space-based imaging sensors usually suffer from low spatial resolution due to the extremely long distance between the target and the imaging sensor. Image super-resolution is an effective data processing operation to get informative high resolution images. In this paper, we comparably study four recent popular models for single image super-resolution based on convolutional neural networks (CNNs) with the purpose of space applications. We specially fine-tune the super-resolution models designed for natural images using simulated images of space objects, and test the performance of different CNN-based models in different conditions that are mainly considered for SBSS. Experimental results show the advantages and drawbacks of these models, which could be helpful for the choice of proper CNN-based super-resolution method to deal with image data of space objects.