RCaz/eu-funding-proposals-sft huggingface dataset:
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Draft the 'Objectives and Scope' section of a Horizon Europe proposal for the project 'New business for farmers and cooperatives in rural areas by local upcycling solutions using underutilized agricultural feedstocks'.

assistant: **Objectives**

PRIMARY aims to develop and pilot local solutions for the production of food, feed, bio-based materials, bioenergy, and fertilizers by valorizing agricultural biomass feedstocks, including grass, greenhouse and cotton by-products, and olive tree pruning that are currently underutilized and exist in substantial amounts in Europe. The project focuses on North-East Europe (Finland) and South-East Europe (Greece), providing business models and demonstrations in rural areas where pilot and demo plants are rare.  PRIMARY works with primary producers and local actors, and pilots six process concepts: 1) separation of protein and fibre rich fractions from grass to produce food/feed and biobased materials, respectively; 2) submerged and 3) solid-state fermentation processes to upcycle the feedstocks to protein rich food and feed ingredients; 4) fibre forming technology to enable production of packaging and construction materials; 5) pelletizing process to solid biofuel for gasification to bioenergy from olive-tree pruning and cotton byproducts; 6) pyrolysis of cotton and olive byproducts to biochar for fertilizer and material applications. The solutions piloted in the project are selected based on cascading use of the feedstocks to find the highest possible value, considering the regional conditions. Sustainability of the new value chains is broadly assessed. To maximise project outcomes and impact, other partners and regions are engaged through an open innovation call to promote the ecosystem for valorizing agricultural biomass, and to show replicability of the project solutions. PRIMARY outcomes, including new processes, products and service concepts, will be communicated via various channels, including a stakeholder platform, to ensure wide exploitation of the solutions. A mu
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Draft the 'Objectives and Scope' section of a Fifth Framework proposal for the project 'Improving the combustion/gasification behavior of various residues&wastes using pretreatment techniques'.

assistant: **Objectives**

The objective of the planned activity is to improve the combustion/gasification behavior of a number of agroresidues & wastes with Worldwide importance, such as wheat straw, olive residue, peach stones, grass, meat and bone meal during combustion and gasification in a fluidized bed reactor. In specific the following tasks will be studied:1) The effect of various pretreatment techniques (leaching, fractionation, pressing, etc.) on the beneficiation of the residues & wastes ash behavior during combustion and gasification in a fluidized bed reactor using various inert bed materials such as silica sand, dolomite, limestone, aluminum sand, followed by simultaneous modeling of the fluidized bed reactor using the produced experimental results2) The evolution of alkali metals, chlorine, sulfur and nitrogen during the various steps of the combustion/gasification reactions in order to identify and evaluate the role of these substances to the formation of both ash-related problems and also harmful effluents such as NOx, SOx, and particulates followed by the development of a mathematical model to describe the whole process.
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Write the concept and methodology overview for 'Integration of Biology and Engineering into an Economical and Energy-Efficient 2G Bioethanol Biorefinery' under Seventh Framework.

assistant: **Concept**

The European Union has set a 10 % mandatory target for the share of renewables (including biofuels) in transportation sector by 2020 in Europe.To achieve this goal sustainable biofuels from lignocellulosic biomass must deploy in Europe very soon since the competition between food vs. energy prevents further (significant) increase on the current first-generation biofuels already in the market. This new generation of biofuels still needs intensive efforts on R&D to fulfill significant GHG reductions in the production chain and to represent an alternative to food-crops derived fuels. Additionally, the use of agricultural residues, industrial or domestic wastes will improve significantly the environmental performance of 2G biofuels.The project will focus on the effective integration and development of advanced technologies through the combined use of Biology and Engineering for the production of second generation (2G) bioethanol, from the most representatives European (wheat straw) and Brazilian (sugarcane bagasse and straw) feedstocks. The research activities will be concentrated in the following areas:i)Feedstock pre-treatmentii)Conversion technologies to second generation (2G) bioethanoliii) Low-temperature distillationiv)Conversion technologies (using the bioprocess-derived materials) for electricity and other added-valuematerialsv)Full process integration and sustainability assessmentThe effective combination of pre-treatment, enzymatic hydrolysis and fermentation using adapted and robust strains displaying new phenotype features, is a clear objective of this proposal since is the key to the economic lignocellulosic ethanol production.At the end of the project, we aim to get a meaningful technological process integration of :i)For Europe: energy-efficient production of
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Explain the overall concept, methodology and approach for the project 'Deep representational learning of the evolutionary DNA code in the vertebrate pallium' (EvoDCode).

assistant: **Concept**

Vertebrate genomes consist of tens of thousands of genes and yet they produce only a limited number of stable cell types. Our understanding of how cell types are encoded in the genome is still lacking. The expression of genes is controlled by gene regulatory elements, which are evolutionarily much less conserved than genes are and can be located far away in the genome. My main goal is to better understand how the genomic sequence underlies cell identity in the pallium across vertebrate species and I hypothesize that gene regulatory logic can be directly learned from the genomic sequence and used to predict cell types. Recent advances in the field of single cell sequencing have made the generation of large epigenomic datasets possible, while novel machine learning models like DNA language models are providing unprecedented insights into the regulatory logic of the genome. In addition, for many non-model species high quality reference genomes are becoming available as there is an increased awareness for the need to preserve biodiversity. I will conduct single cell multiome sequencing, supplemented with low-cost single-cell ATAC-seq using the HyDrop platform - developed in the host-lab - to profile regulatory elements across cell types in the pallium from multiple species, including mammals, birds, lizards and fish. My experience in generating and annotating single cell data from the brain will aid in the analysis and alignment of the generated datasets. Next, I will use this data to study the relationships between the genome of a species and the identified cell types by training species-aware DNA language models and using these models to identify species-specific and conserved regulatory logic. These models will not only be interesting from an evolutionary perspective, bu
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Compose a compelling abstract for 'Moving Towards Adaptive Governance in Complexity: Informing Nexus Security' demonstrating excellence, impact and implementation quality for a Horizon 2020 call.

assistant: **Abstract**

MAGIC is a proposal coordinated by the Institute of Environmental Science and Technology (ICTA) of the Autonomous University of Barcelona (UAB) in collaboration with partners which have a proven and track record in their respective fields of competence.Our objective is to open the path towards a new way of managing the Nexus in which researchers and decision makers work together in the search for development strategies that can contribute to the smart, sustainable and inclusive economic growth required by the EU 2020 Strategy, while maintaining a leading and informed participation in international discussions about global issues, like climate change or food security.In order to do so, MAGIC deploys a set of novel, cutting-edge and system-oriented approaches that originates from system ecology, bio-economics and Science and Technology Studies. Their combination allows MAGIC to highlights if a certain mix of EU policies results in undesirable or unforeseen outcomes. Climate, water, land energy, and food modeling are integrated into a socio- and bio-economics framework using an iterative and participatory method. Significant care is taken to embed these ideas and approaches within the advisory and decision making functions of the European Commission.Impacts are twofold.First, MAGIC contributes a methodological framework where the needs for advice of different DG in the design of development strategies for the EU are covered using a method that can embrace the complexity of the nexus, for a better understanding of the interactions it holds. Second, the project provides ‘on the flight’ advice to the EC about the timeliness and soundness for the EU 2020 Strategy and the EU position in international agreements of EU policies -like the Water Framework Directive, the Common Agri
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Compose the 'State of the Art and Innovation' section for a Fifth Framework proposal on 'Closed system for water and nutrient management in horticulture'.

assistant: **Innovation**

Throughout Europe, current horticultural practices cause very large amounts of water and nutrients to be wasted to the environment. To avoid this and to increase possibilities to control crop growth and quality, the supply of water and individual nutrients should be controlled independently and in proportion to the plant's demand, rather than supplying water and nutrients together in excess. In this project a holistic multidisciplinary approach, combining modelling and experimental research in plant physiology, substrate physics and chemistry, sensor technology, machine learning, control and optimisation techniques and economics, is adopted to reach the objectives. In addition the end users already have considerable role in the project and the last project year is used to test the integrated system at an applied research station. Furthermore, national workshops for dissemination of the results will be held during the last year in 5 countries.
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Write clear, measurable objectives and define the scope for the project 'Blueprints for an integration of science, technology and environmental policy' (BLUEPRINT) under Fifth Framework.

assistant: **Objectives**

S&T policies are a key factor for sustainability but the instruments must be adapted within a broader framework that stresses the importance of policy coherence and of inter-linkages within innovation systems. Policy coherence implies improved integration of S&T and environmental policies and thus an enhanced dialogue and coordination between science and technology and environmental policy makers and researchers. Thus the focus of the BLUEPRINT network is to enhance dialogue and initiating partnerships in S&T and environmental policies that can contribute to both sustainable development and industrial competitiveness. BLUEPRINT is the short name for Blueprints for an Integration of Science, Technology and Environmental Policy". In five workshops and a conference the network will undertake an in-depth examination or the relation between S& T and environmental policies, considering the complexity of factors in influencing innovation and environmental decisions along value chains."
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Write a project proposal abstract for 'Antibiotic targeting of wolbachia endosymbiotic bacteria as a new approach to the treatment of filarial infection and disease' to be submitted under Fifth Framework.

assistant: **Abstract**

Wolbachia are symbiotic endobacteria in filarial nematodes that have recently emerged as targets for an improved chemotherapy of filariasis by tetracycline antibiotics, with the potential to close the gaps left open in current mass treatment programs. The purposes of this project are i) to obtain the optimal regimen with anti-Wolbachia antibiotics leading to Wolbachia depletion and sterilization or killing of adult worms in human filariasis (lymphatic filariasis, loiasis and onchocerciasis); ii) to analyse the role of Wolbachia in inflammatory processes which lead to disease manifestations (acute episodes of lymphangitis); iii) to investigate the role of Wolbachia release by microfilaricidal therapy in the induction of drug side effects. In their combination, the studies will allow to assess the role of Wolbachia in pathogenesis and as targets for the long-needed <second punch> for sustained interruption of transmission.
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Explain the overall concept, methodology and approach for the project 'Doctoral Network on Assistive Health Technology in Unsupervised/Home Settings (AERIALIST)' (AERIALIST).

assistant: **Concept**

In healthcare, assistive health technology plays a pivotal role as a catalyst for positive transformation. These innovative solutions are crafted to improve health outcomes and treatment regimens and address the challenges of various diseases. Their overarching mission is to enhance the overall quality of life while ensuring equal access to and participation in daily activities for everyone, encompassing patients with various health conditions, the expanding elderly population, and even individuals navigating an increasingly automated and demanding work environment.Outstanding instances of assistive health technology include home-based rehabilitation robotics that target sensorimotor deficits, electric wheelchairs providing individuals with independent mobility, telehealth applications facilitating cardiovascular monitoring, and powered prostheses that reinstate mobility and instil confidence in everyday activities.Despite recent strides in hardware, sensing, control systems and actuation technologies, notable limitations persist. These systems often encounter challenges when operating beyond their specifically tailored environments, necessitating manual adjustments and limiting safety and reliability in dynamic scenarios. We aim to push assistive health technology towards intelligent, safe, and reliable assistance that mirrors human interaction. This entails harnessing the latest ML advancements for real-world human-engineering system interactions.We are committed to cultivating a new generation of multidisciplinary doctoral candidates to realise this vision. Through close collaboration with industry partners, and assistive health technology developers, these candidates will gain knowledge from diverse disciplines, encompassing sensing, control, and safety consideratio
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Write clear, measurable objectives and define the scope for the project 'Elucidating the genomic architecture of genetic load' (SV-Load) under Horizon Europe.

assistant: **Objectives**

How can we accurately measure and predict genetic load? In SV-load, I aim to understand how an often overlooked, but high impact class of genomic variation contributes to genetic load. Structural variants (SVs) have been shown to have significant implications for individual and population fitness and impact more genomic content overall than traditional whole-genomic markers (i.e., single nucleotide polymorphisms, SNPs). However, whole-genome SVs are underrepresented in population studies as they have historically been difficult to characterise and genotype at the population-scale. As a result, the dynamics of SV diversity in the face of fundamental evolutionary processes (e.g., selection, recombination, and population size) is relatively unresolved and hinders the study of genetic load across disciplines. To address this gap, I will implement in-silico approaches to forecast and experimentally test how SVs respond to different demographic parameters in a non-model species (Coelopa frigida). During my PhD and first postdoc I honed the sequencing and bioinformatic skills necessary to study genome-wide SVs at the population-scale. I will bring this expertise to the host lab of Dr. Mérot and Dr. Glémin at the Université de Rennes (UR, France), experts in the field of evolutionary biology and ecology. Training with the host lab, and a secondment with A/Prof Bataillon at Aarhus University (AU, Denmark) will broaden my modelling and experimental skills. Through these collaborations, I will learn new multidisciplinary approaches in modelling, statistical genomics and experimentation. This project will not only complement my existing skills but enable me to gain a competitive advantage in establishing my European career in the exciting and dynamic field of evolutionary biology.
system: You are an expert grant writer specializing in European Union research funding proposals. You write compelling, well-structured proposal sections that demonstrate excellence, impact, and implementation quality, using precise EU terminology and following best practices for Horizon Europe, Horizon 2020, and earlier framework programmes.

user: Draft the 'Objectives and Scope' section of a Fourth Framework proposal for the project 'Genetic diversity and parasitic infections of european hake (Merluccius merluccius) as descriptors of fishing impact on Mediterranean and Atlantic stocks.'.

assistant: **Objectives**

The research project plans to analyse the relationship between the genetic diversity of hake populations from different geographic areas of Mediterranean Sea and North-East Atlantic waters and the levels of parasitic infections. The aim is to ascertain if a genetic erosion process is acting on exploited populations of hake and if a loss of genetic variation in depleted populations could affect their capability to respond efficaciously to parasitic infection outbreaks. In order to achieve these objectives, a multidisciplinary approach will be used that is expected to provide innovative tools to define the state of hake samples and will contribute to a better knowledge of the correlation between fishing activities and its effects on biodiversity.The maintenance of a stable equilibrium between conservation and exploitation of marine resources is recognised as a crucial goal for the survival of the whole fishery sector. In this perspective new tools allowing a reliable state assessment of marine resources and a quick address of their management are needed.Data drawn from ecology and population dynamics have been the main ground of fishery management, because the abundance and size of fish available for harvesting were considered as the most relevant information to address exploitation (A11endorf et al., 1987). In the last years, however, methods of population genetics have been fruitfully used to produce a bulk of data frequently allowing the estimation of parameters having management imprecations (Avise, 1996) such as stock identification, evaluation of degrees of genetic variability, investigations on the relationship occurring between over-exploitation and genetic erosion. At the same time it has been assessed that genetic diversity plays an important role in natural pop