Taxonomy of Protista

Taxonomy of Protista
A protist is any eukaryotic organism (one with cells containing a nucleus) that is not an animal, plant, or fungus. The protists do not form a natural group, or clade, since they exclude certain eukaryotes with whom they share a common ancestor; but, like algae or invertebrates, the grouping is used for convenience. In some systems of biological classification, such as the popular five-kingdom scheme proposed by Robert Whittaker in 1969, the protists make up a kingdom called Protista, composed of "organisms which are unicellular or unicellular-colonial and which form no tissues". In the 21st century, the classification shifted toward a two-kingdom system of protists: Chromista (containing the chromalveolate, rhizarian and hacrobian groups) and Protozoa (containing excavates and all protists more closely related to animals and fungi).
The following groups contain protists. The clade Opisthokonta also contains the animals and the fungi, and the kingdom Archaeplastida also contains algae and plants.
Key to symbols used:
(P) = Paraphyletic group.
† = Extinct group.
? = Group of uncertain taxonomic position.
* = Group lacking molecular data.
Overview
This article follows the efforts of the scientific community and the International Society of Protistologists to revise the taxonomy of protists in a manner that reflects their phylogeny and evolution, striving away from the use of historical paraphyletic taxa and relying exclusively on clades as the basis of the classification. The reference used for the general arrangement of groups is the publication Revisions to the Classification, Nomenclature and Diversity of Eukaryotes by Adl et al. (2019). Other studies are used for some specific groups of protists that have been revised after 2018, such as slime moulds, glaucophyte algae, arcellinid testate amoebae and planktonic foraminifera.
The following cladogram shows the relationships between the major groups of protists, as well as the kingdoms of animals, plants and fungi, according to the most recent phylogenetic analyses.
Amorphea
Obazoa
Incertae sedis Obazoa:
Apusomonadida [Apusomonadidae ; Thecomonadea ; Apusozoa pro parte]. Amastigomonas, Apusomonas, Chelonemonas, Manchomonas, Multimonas, Podomonas, Thecamonas, Catacumbia, Cavaliersmithia, Karpovia, Singekia.
Breviatea [Breviatida ; Breviatidae ; Apusozoa pro parte]. Breviata, Lenisia, Pygsuia, Subulatomonas.
Opisthokonta
Nucletmycea [Holomycota ]
Rotosphaerida [Cristidiscoidida ; Nucleariidae ]. Fonticula, Nuclearia, Parvularia, Pompholyxophrys, Lithocolla, ?Vampyrellidium*, ?Elaeorhanis*, ?Pinaciophora*, ?Rabdiophrys*, ?Rabdiaster*, ?Thomseniophora*.
Fungi . Excluded from protists.
Holozoa . Incertae sedis: Tunicaraptor , Bicellum brasieri .
Ichthyosporea [Mesomycetozoea ]
Dermocystida [Rhinosporidaceae ]. Amphibiocystidium, Amphibiothecum, Chromosphaera, Dermocystidium, Rhinosporidium, Sphaerothecum.
Ichthyophonida [Ichthyophonae ; Amoebidiidae ]. Abeoforma, Amoebidium, Anurofeca, Astreptonema, Caullerya, Creolimax, Eccrinidus, Enterobryus, Enteropogon, Ichthyophonus, Palavascia, Pseudoperkinsus, Psorospermium, Sphaeroforma.
Pluriformea
Corallochytrium limacisporium
Syssomonas multiformis
Filasterea . Capsaspora, Ministeria, Pigoraptor, Txikispora.
Choanozoa [Choanozoa (P)]
Choanoflagellata [Craspedomonadina ; Craspedomonadaceae ; Craspedophyceae ; Craspédomonadophycidées ; Craspedomonadophyceae ; Choanomonadea ; Choanoflagelliida ; Choanoflagellatea ; Choanomonada ].
Craspedida
Salpingoecidae . Astrosiga, Aulomonas, Choanoeca, Cladospongia, Codonocladium, Codonosigopsis, Codosiga [Codonosiga], Desmarella [Codonodesmus; Kentrosiga], Dicraspedella, Diploeca, Diplosiga, Diplosigopsis, Hartaetosiga, Kentia, Lagenoeca, Microstomoeca, Monosiga, Mylnosiga, Pachysoeca, Proterospongia, Salpingoeca, Salpingorhiza, Sphaeroeca, Stagondoeca, Stelexomonas, Stylochromonas.
Acanthoecida
Acanthoecidae . Acanthoeca, Enibas, Helgoeca, Polyoeca, Savillea.
Stephanoecidae . Acanthocorbis, Amoenoscopa, Apheloecion, Bicosta, Calliacantha, Calotheca, Campanoeca, Campyloacantha, Conion, Cosmoeca, Crinolina, Crucispina, Diaphanoeca, Didymoeca, Kakoeca, Monocosta, Nannoeca, Parvicorbicula, Platypleura, Pleurasiga, Polyfibula, Saepicula, Saroeca, Spinoeca, Spiraloecion, Stephanacantha, Stephanoeca, Syndetophyllum.
Metazoa [Animalia ; Eumetazoa ]. Excluded from protists.
Amoebozoa
Incertae sedis Amoebozoa: Belonocystis, Boveella, Biomyxa, Corallomyxa, Gibbodiscus, Hartmannia, Malamoeba, Malpighamoeba, Microcorycia, Microglomus, Oscillosignum, Parmulina, Penardochlamys, Pseudothecamoeba, Rhabdamoeba, Schoutedamoeba, Stereomyxa, Subulamoeba, Thecochaos, Triaenamoeba, Unda, Zonomyxa.
Tubulinea
Corycida . Amphizonella, Diplochlamys, Trichosphaerium (=Atrichosa), ?Microcorycia, ?Parmulina, ?Penardochlamys, ?Zonomyxa.
Echinamoebida .
Echinamoebidae . Echinamoeba, Micriamoeba.
Vermamoebidae . Vermamoeba.
Elardia
Leptomyxida
Leptomyxidae . Leptomyxa.
Rhizamoebidae . Rhizamoeba.
Flabellulidae . Flabellula [incl. Paraflabellula].
Gephyramoebidae . Gephyramoeba.
Arcellinida . Incertae sedis genera: Acipyxis, Apolimia, Argynnia, Armipyxis, Conicocassis, Cornuapyxis, Ellipsopyxella, Ellipsopyxis, Erugomicula, Frenopyxis, Geamphorella, Geoplagiopyxis, Geopyxella, Hoogenraadia, Jungia, Lagenodifflugia, Lamptopyxis, Lamptoquadrula, Leptochlamys, Maghrebia, Meisterfeldia, Microquadrula, Nabranella, Oopyxis, Paracentropyxis, Paraquadrula, Pentagonia, Physochila, Planhoogenraadia, Pomoriella, Pontigulasia, Prantlitina, Proplagiopyxis, Protoplagiopyxis, Protocucurbitella, Pseudawerintzewia, Pseudonebela, Schoenbornia, Sexangularia, Suiadifflugia, Trigonopyxis, Wailesella.
Phryganellina
Phryganellidae . Phryganella.
Cryptodifflugiidae . Cryptodifflugia.
Organoconcha
Microchlamyiidae . Microchlamys, Spumochlamys, Pyxidicula.
Glutinoconcha
Volnustoma
Heleoperidae . Heleopera.
Hyalospheniformes
Hyalospheniidae . Alabasta, Alocodera, Apodera, Certesella, Cornutheca, Gibbocarina, Hyalosphenia, Longinebela, Mrabella, Nebela, Padaungiella, Planocarina, Porosia, Quadrulella.
Excentrosoma
Centropyxidae [includes Plagiopyxidae]. Awerinzewia, Bullinularia, Centropyxis, Golemanskia, Plagiopyxis.
Cylindrothecina
Cylindrifflugiidae . Cylindrifflugia.
Longithecina
Difflugiidae . Difflugia, Zivkovicia.
Lesquereusiidae . Lesquereusia.
Sphaerothecina
Arcellidae . Arcella, Galeripora.
Netzeliidae . Cucurbitella, Cyclopyxis, Netzelia
Euamoebida
Amoebina
Amoebidae . Amoeba, Chaos, Polychaos, Parachaos, Trichamoeba, Deuteramoeba, Hydramoeba
Hartmannellidae . Cashia, Copromyxa, Copromyxella, Glaeseria, Hartmannella, Ptolemeba, Saccamoeba
Nolandina
Nolandellidae . Nolandella.
Evosea
Variosea
Angulamoeba
Arboramoeba
Darbyshirella
Dictyamoeba
Ischnamoeba
Heliamoeba
Filamoeba
Phalansterium .
Flamellidae . Flamella, Telaepolella.
Protosteliida . Protostelium [incl. Planoprotostelium].
Fractovitellida
Acramoebidae . Acramoeba.
Schizoplasmodiidae . Ceratiomyxella, Nematostelium, Schizoplasmodium.
Soliformoviidae . Soliformovum, Grellamoeba
Cavosteliida . Cavostelium, Schizoplasmodiopsis, Tychosporium.
Holomastigida . Artodiscus, Multicilia.
Eumycetozoa [Mycetozoa ; Macromycetozoa ]
Dictyostelia [Dictyosteliomycetes ]. Acytostelium, Cavenderia, Coremiostelium, Dictyostelium, Heterostelium, Polysphondylium, Raperostelium, Rostrostelium, Speleostelium, Tieghemostelium, Synstelium, ?Coenonia.
Protosporangiida [Ceratiomyxea ; Ceratiomyxomycetes ]
Ceratiomyxa
Protosporangiidae . Clastostelium, Protosporangium.
Myxogastria [Myxogastrea ; Myxomycetes ]
Lucisporomycetidae [Lucisporinia ; Lucisporidia ]. Incertae sedis genera: Arcyriatella, Calonema, Minakatella, Trichioides.
Cribariidia
Cribariales
Cribariaceae . Cribaria, Lindbladia, Licaethalium.
Trichiidia
Reticulariales
Reticulariaceae . Alwisia, Lycogala, Reticularia, Tubifera.
Liceales
Liceaceae . Licea, Listerella.
Trichiales
Dianemataceae . Calomyxa, Dianema, Dictydiaethalium, Prototrichia.
Trichiaceae . Hemitrichia [incl. Trichia decipiens], Arcyria [incl. Arcyodes], Perichaena, Trichia [incl. Cornuvia, Metatrichia, Oligonema].
Columellomycetidae [Collumellinia ; Columellidia ]. Incertae sedis genera: Diachea, Echinosteliopsis, Leptoderma, Paradiachea, Protophysarum, Trabrooksia, Willkommlangea.
Echinosteliidia
Echinosteliales
Echinosteliaceae . Barbeyella, Echinostelium [incl. Semimorula].
Stemonitidia
Clastodermatales
Clastodermataceae . Clastoderma.
Meridermatales
Meridermataceae . Meriderma.
Stemonitidales
Stemonitidaceae . Macbrideola, Stemonitis, Symphytocarpus.
Amaurochaetaceae . Comatricha, Stemonaria, Stemonitopsis, Amaurochaete, Brefeldia, Enerthenema, Paradiacheopsis.
Physarales
Lamprodermataceae . Lamproderma [incl. Dichaeopsis, Colloderma, Elaeomyxa], ?Collaria.
Didymiaceae – Diderma, Didymium, Lepidoderma, Mucilago.
Physaraceae . Craterium, Leocarpus, Fuligo, Physarum, Physarella, Physarina, Kelleromyxa, Badhamia.
Cutosea [Squamocutida ]
Squamamoebidae . Armaparvus, Squamamoeba.
Sapocribridae . Sapocribrum.
Archamoebea
Tricholimacidae . Tricholimax.
Entamoebidae . Entamoeba.
Rhizomastixidae . Rhizomastix.
Mastigamoebida . Endamoeba, Endolymax, Iodamoeba, Mastigamoeba, Mastigina.
Pelobiontida [Pelomyxidae ]. Mastigella, Pelomyxa
Discosea
Flabellinia
Dermamoebida
Dermamoebidae . Dermamoeba, Paradermamoeba, ?Mycamoeba, Coronamoeba.
Mayorellidae . Mayorella.
Thecamoebida . Sappinia, Stenamoeba, Stratorugosa, Thecamoeba, Thecochaos.
Dactylopodida . Cunea, ?Janickina,* Korotnevella, Neoparamoeba, Paramoeba, Pseudoparamoeba, Vexillifera.
Vannellida [Vannellidae ]. Clydonella, Lingulamoeba, Paravannella, Pessonella*, Ripella, Vannella.
Stygamoebida (P). Stygamoeba, Vermistella.
Centramoebia
Acanthopodida [Centramoebida ]. Acanthamoeba, Balamuthia, Luapeleamoeba, Protacanthamoeba, Dracoamoeba, Vacuolamoeba.
Himatismenida . Cochliopodium, Ovalopodium, Parvamoeba.
Pellitida . Endostelium, Gocevia, Paragocevia*, Pellita.
Diaphoretickes
Incertae sedis Diaphoretickes:
Microheliella maris
Telonemia [Telonemidae ]. Lateronema, Telonema.
Provora
Nibbleridia . Nibbleromonas, Ubysseya.
Nebulidia . Nebulomonas, Ancoracysta.
Archaeplastida
Glaucophyta [Glaucocystaceae ; Glaucocystophyta ]. Incertae sedis Glaucophyta: ?Archaeopsis, ?Chalarodora, ?Glaucocystopsis, ?Peliaina, ?Strobilomonas.
Cyanophorales . Cyanophora.
Glaucocystales . Glaucocystis.
Gloeochaetales . Cyanoptyche, Gloeochaete.
Picozoa [Picobiliphytes ]. Picomonas.
Rhodelphidia . Rhodelphis.
Rhodophyceae [Rhodophyta ; Rhodoplantae ]
Chloroplastida [Viridiplantae ; Chlorobionta ; Chlorobiota ]
SAR
Stramenopiles
?Environmental clades MAST-21, MAST-25
?Platysulcus tardus
Bigyra
Opalozoa . Incertae sedis: Cantina, Rictus, environmental clades MAST-16, MAST-22 and MAST-24 .
Placidozoa
Placididea . Allegra, Haloplacidia, Pendulomonas, Placidia, Placilonga, Suigetsumonas, Wobblia.
Nanomonadea [clade MAST-3]. Incisomonas, Solenicola.
Opalomonadea [clade MAST-12]. No described species.
Opalinata [Slopalinida ]
Proteromonadea . Karotomorpha, Proteromonas.
Opalinea . Cepedea, Opalina, Protoopalina, Protozelleriella, Zelleriella.
Blastocystis
Bicosoecida . Adriamonas, Anoeca, Bicosoeca, Caecitellus, Cafeteria, Cafileria, Cyathobodo, Filos, Halocafeteria, Nanum, Paramonas, Pseudobodo, Pseudodendromonas, Otto, Regin.
Sagenista . Incertae sedis: environmental clades MAST-4, MAST-7, MAST-8, MAST-9, MAST-10, MAST-11 and MAST-20 .
Labyrinthulomycetes
Amphitremida . Amphitrema, Archerella, Diplophrys, Paramphitrema.
Amphifilida . Amphifila, Fibrophrys, Sorodiplophrys.
Oblongichytrida . Oblongichytrium.
Labyrinthulida . Aplanochytrium, Labyrinthula, Stellarchytrium.
Thraustochytrida . Althornia, Aurantiochytrium, Botryochytrium, Japanochytrium, Monorhizochytrium, Parietichytrium, Phycophthorum, Schizochytrium, Sicyoidochytrium, Thraustochytrium, Ulkenia.
Pseudophyllomitidae [clade MAST-6]. Pseudophyllomitus.
Gyrista . Incertae sedis: environmental clades MAST-1, MAST-2 and MAST-23 .
Bigyromonadea
Developea . Developayella, Develorapax.
Pirsoniales . Pirsonia.
Pseudofungi [Heterokontimycotina ].
Hyphochytriales . Anisolpidium, Canteriomyces.
Anisolpidiaceae
Hyphochytridiomycetaceae . Hyphochytrium.
Rhizidiomycetaceae . Latrostium, Rhizidiomyces, Rhizidiomycopsis.
Oomycetes [Peronosporomycetes ]. Incertae sedis genera: Atkinsiella, Ciliomyces, Crypticola, Ectrogella, Eurychasma, Halodaphnea, Haliphthoros, Haptoglossa, Lagena, Lagenisma, Olpidiopsis, Pontisma, Pythiella, Rozellopsis, Sirolpidium.
Saprolegnialean lineage . Achlya, Aphanomyces, Aplanopsis, Apodachlya, Aquastella, Geolegnia, Leptomitus, Newbya, Pythiopsis, Protoachlya, Salisapilia, Saprolegnia, Thraustotheca.
Peronosporalean lineage . Albugo, Bremia, Chlamydomyzium, Halophytopthora, Hyaloperonospora, Lagenidium, Myzocytiopsis, Peronospora, Plasmopara, Pythium, Pseudoperonospora, Phytophthora, Phytopythium, Pustula.
Ochrophyta
Chrysista . Incertae sedis: environmental lineages MOCH-3 and MOCH-5 , Chrysowaernella, Aurearena.
SII clade
Olisthodiscophyceae . Olisthodiscus.
Pinguiophyceae . Glossomastix, Phaeomonas, Pinguiochrysis, Pinguiococcus, Polypodochrysis.
Limnistia
Chrysophyceae . Incertae sedis: Chryososaccus, Chrysosphera, Cyclonexis, Lygynion, Phaeoplaca.
Chromulinales . Chromulina, Chrysomonas.
Hibberdiales . Hibberdia.
Ochromonadales . Spumella, Pedospumella, Ochromonas.
Paraphysomonadida . Paraphysomonas.
Synurales . Chrysodidymus, Mallomonas, Synura, Tesselaria.
Eustigmatophyceae
Eustigmatales
Paraeustigmatos
Eustigmataceae . ?Ellipsoidion, Chlorobotrys, Eustigmatos, Pseudocharaciopsis, Vischeria.
Monodopsidaceae . Microchloropsis, Monodopsis, Nannochloropsis, Pseudotetraedriella.
Neomonodaceae . ?Botryochloropsis, Characiopsella, Munda, Neomonodus, Pseudellipsoidion.
Goniochloridales . Goniochloris, Pseudostaurastrum, Tetraedriella, Trachydiscus, Vacuoliviride.
Picophagea [Synchromophyceae ]. Chlamydomyxa, Chrysopodocystis, Guanochroma, Leukarachnion, Picophagus, Synchroma.
SI clade
Raphidomonadea
Raphidophycidae [Chattonellales ; Vacuolariales ]. Chattonella, Fibrocapsa, Goniostomum, Haramonas, Heterosigma, Merotricha, Vacuolaria.
Raphopoda
Commatiida [Commatiidae ]. Commation.
Actinophryida
Actinosphaerina [Actinosphaeriidae ]. Actinosphaerium.
Actinophryina
Actinophryidae . Actinophrys.
Helioraphidae . Heliorapha.
PX clade
Chrysomerophyceae . Antarctosaccion, Chrysomeris, Chrysowaernella, Giraudyopsis, Rhamnochrysis, Tetrasporopsis.
Chrysoparadoxophyceae . Chrysoparadoxa.
Phaeophyceae
Ascoseirales . Ascoseira.
Desmarestiales . Arthrocladia, Desmarestia (P), Himantothallus, Phaeurus.
Dictyotales . Dictyota, Dilophus, Lobophora, Padina, Stypopodium, Taonia, Zonaria.
Discosporangiales . Choristocarpus, Discosporangium.
Ectocarpales . Adenocystis, Acinetospora, Asterocladon, Asteronema, Chordaria, Ectocarpus, Scytosiphon.
Fucales . Ascophyllum, Bifurcaria, Cystoseira, Druvillaea, Fucus, Hormosira, Sargassum, Turbinaria.
Ishigeales [Ishigeacea ]. Ishige.
Laminariales . Akkesiophycus, Alaria, Chorda, Costaria, Laminaria, Lessonia, Pseudochoda.
Nemodermatales . Nemoderma.
Onslowiales . Onslowia.
Ralfsiales . Lithoderma, Neoralfsia, Pseudolithoderma, Ralfsia.
Scytothamnales . Scytothamnus, Splachnidium, Stereocladon.
Sphacelariales . Chaetopteris, Halopteris, Stypocaulon, Sphacelaria, Verosphacella.
Sporochnales . Bellotia, Carpomitra, Nereia, Sporochonus, Tomaculopsis.
Syringodermatales . Syringoderma.
Tilopteridales . Cutleria, Halosiphon, Haplospora, Phaeosiphoniella, Phyllaria, Tilopteris.
Phaeosacciophyceae
Phaeosaccionaceae . Phaeosaccion.
Tetrasporopsidaceae . Tetrasporopsis, Psammochrysis, Chrysomeris.
Phaeothamiophyceae
Phaeothamniales . Phaeothamnion.
Pleurochloridales . Pleurochloridella.
Schizocladiophyceae . Schizocladia.
Xanthophyceae [Heterokontae ; Heteromonadea Xanthophyta ]
Tribonematales . Botrydium, Bumilleriopsis, Characiopsis, Chloromeson, Heterococcus, Monadus, Ophiocytium, Sphaerosorus, Tribonema, Xanthonema.
Vaucheriales . Vaucheria.
Diatomista [SIII clade]. Incertae sedis: environmental clades MOCH-1, MOCH-2 and MOCH-4 .
Bolidophyceae [Parmales ]. Bolidomonas, Triparma, Tetraparma, Pentalamina.
Diatomeae [Bacillariophyta ]
Leptocylindrophytina
Leptocylindrophyceae . Leptocylindrus, Tenuicylindrus.
Corethrophyceae . Corethron.
Ellerbeckiophytina . Ellerbeckia.
Probosciophytina . Proboscia.
Melosirophytina . Aulacoseira, Melosira, Hyalodiscus, Stephanopyxis, Paralia, Endictya.
Coscinodiscophytina . Actinoptychus, Coscinodiscus, Actinocyclus, Asteromphalus, Aulacodiscus, Stellarima.
Rhizosoleniophytina . Guinardia, Rhizosolenia, Pseudosolenia.
Arachnoidiscophytina . Arachnoidiscus.
Bacillariophytina
Mediophyceae
Chaetocerotophycidae . Chaetoceros, Bacteriastrum, Dactyliosolen, Cerataulina, Hemiaulus, Eucampia, Acanthoceras, Urosolenia, Terpsinoë, Hydrosera.
Lithodesmiophycidae . Lithodesmium, Lithodesmioides, Helicotheca, Bellerochea, Ditylum.
Thalassiosirophycidae . Thalassiosira, Lindavia, Cyclotella, Stephanodiscus, Cyclostephanos, Discostella, Bacteriosira, Skeletonema, Detonula.
Cymatosirophycidae . Cymatosira, Minutocellus, Papiliocellulus, Leyanella, Extubocellulus, Plagiogrammopsis, Campylosira, Brockmanniella, Pierrecomperia.
Odontellophycidae . Odontella, Triceratium, Cerataulus, Pleurosira, Pseudauliscus, Amphitetras, Trieres, Mastodiscus.
Chrysanthemodiscophycidae . Chrysanthemodiscus, Biddulphiopsis, Trigonium, Isthmia, Lampriscus, Stictocyclus, Ardissonea, Climacosphenia, Toxarium.
Biddulphiophyceae
Biddulphiophycidae . Biddulphia.
Attheya
Bacillariophyceae
Striatellaceae . Striatella, Pseudostriatella.
Urneidophycidae . (P?) Plagiogramma, Dimeregramma, Rhaphoneis, Delphineis, Psammoneis, Bleakeleya, Asterionellopsis.
Fragilariophycidae . Fragilaria, Synedra, Tabellaria, Asterionella, Diatoma, Tabularia, Cyclophora, Astrosyne, Licmophora, Rhabdonema, Grammatophora, Staurosira, Thalassionema.
Bacillariophycidae . Eunotia, Achnanthes, Bacillaria, Nitzschia, Pseudonitzschia, Cylindrotheca, Navicula, Seminavis, Haslea, Stauroneis, Pleurosigma, Gyrosigma, Achnanthidium, Cocconeis, Frustulia, Diploneis, Sellaphora, Pinnularia, Gomphonema, Cymbella, Didymosphenia, Phaeodactylum, Amphora, Entomoneis, Epithemia, Surirella, etc.
Dictyochophyceae [Silicoflagellata ]
Dictyochales [Dictyochida ; Dictyochaceae ]. Dictyocha.
Florenciellales . Florenciella, Verrucophora.
Pedinellales [Ciliophryida ; Actinomonadaceae ]. Actinomonas, Apedinella, Ciliophrys, Mesopedinella, Palatinella, Pedinella, Pseudopedinella, Pteridomonas.
Rhizochromulinales [Rhizochromulinaceae ]. Rhizochromulina.
Pelagophyceae
Pelagomonadales . Aureococcus, 'Pelagococcus, Pelagomonas.
Sarcinochrysidales
Sarcinochrysidaceae . Ankylochrisis, Arachnochrysis, Aureoscheda, Aureoumbra, Nematochrysopsis, Pelagospilus, Pulvinaria, Sarcinochrysis, Sargassococcus.
Chrysocystaceae . Chrysocystis, Chrysoreinhardia, Sungminbooa.
Alveolata
Colpodellida
Vitrellaceae . Vitrella.
Colpodellaceae . Colpodella, Chilovora, Voromonas.
Chromeraceae . Chromera.
Alphamonaceae . Alphamonas.
Perkinsidae [Perkinsozoa ; Perkinsozoa ]. Dinovorax, Parvilucifera, Perkinsus, ?Phagodinium, ?Psammosa, Rastrimonas, Snorkelia
Colponemida (P)
Colponemidia . Colponema.
Acavomonidia . Acavomonas.
Palustrimonas
Oxyrrhis [Oxyrrhinaceae ]
Dinoflagellata . Incertae sedis genera: free-living (Adenoides, Akashiwo, Amphidiniella, Ankistrodinium, Apicoporus, Archaeosphaerodiniopsis, Bispinodinium, Bysmatrum, Cabra, Cladopyxis, Crypthecodinium, Cucumeridinium, Dactylodinium, Dicroerisma, Gloeodinium, Grammatodinium, Gynogonadinium, Gyrodiniellum, Halostylodinium, Heterodinium, Moestrupia, Paragymnodinium, Phytodinium, Plagiodinium, Planodinium, Pileidinium, Pseudadenoides, Pseudothecadinium, Pyramidodinium, Rhinodinium, Roscoffia, Sabulodinium, Sphaerodinium, Spiniferodinium, Testudodinium, Thecadinium, Thecadiniopsis, Togula) and parasitic Blastodiniales [no longer valid] (Amyloodinium, Apodinium, Cachonella, Caryotoma, Crepidoodinium, Haplozoon, Oodinium, Myxodinium, Piscinoodinium, Protoodinium, Rhinodinium, Schyzochitriodinium, Stylodinium).
Syndiniales . Incertae sedis genera: Ichthyodinium and Ellobiopsidae (Ellobiopsis, Thalassomyces).
Euduboscquellidae . Euduboscquella, Dogelodinium, Keppenodinium.
Amoebophryidae [environmental Marine Alveolate Group II]. Amoebophrya.
Syndinidae [environmental Marine Alveolate Group IV]. Hematodinium, Syndinium, Solenodinium.
Sphaeriparaceae . Atlanticellodinium, Sphaeripara.
Noctilucales [Noctiluciphyceae ]. Abedinium, Cachonodinium, Craspedotella, Cymbodinium, Kofoidinium, Leptodiscus, Noctiluca, Petalodinium, Pomatodinium, Scaphodinium, Spatulodinium.
Dinophyceae
Gymnodiniphycidae
Gymnodinium sensu stricto. Barrufeta, Chytriodinium, Dissodinium, Erythropsidinium, Greuetodinium, Gymnodinium, Lepidodinium, Nematodinium, Nusuttodinium, Pellucidodinium, Polykrikos, Proterythropsis, Warnowia.
Amphidinium sensu stricto
Gyrodinium sensu stricto
Kareniaceae . Brachidinium, Karenia, Karlodinium, Takayama.
Ceratoperidiniaceae . Ceratoperidinium, Kirithra.
Torodiniales . Kapelodinium, Torodinium.
Levanderina
Margalefidinium
Cochlodinium sensu stricto
Ptychodiscales . Achradina, Amphilothus, Balechina, Ptychodiscus, Sclerodinium.
Borghiellaceae . Baldinia, Borghiella.
Tovelliaceae . Bernardinium, Esoptrodinium, Jadwigia, Tovellia.
Suessiaceae . Ansanella, Asulcocephalium, Biecheleria, Biecheleriopsis, Leiocephalium, Pelagodinium, Polarella, Prosoaulax, Protodinium, Symbiodinium, Yihiella.
Peridiniphycidae
Gonyaulacales . Alexandrium, Amylax, Ceratium, Ceratocorys, Coolia, Fukuyoa, Fragilidium, Gambierdiscus, Goniodoma, Gonyaulax, Lingulodinium, Ostreopsis, Pentaplacodinium, Peridiniella, Protoceratium, Pyrocystis, Pyrodinium, Pyrophacus, Tripos.
Peridiniales . Amphidiniopsis, Archaeperidinium, Blastodinium*, Diplopelta, Diplopsalis, Diplopsalopsis, Herdmania, Niea, Oblea, Palatinus, Parvodinium, Peridinium, Peridiniopsis, Preperidinium, Protoperidinium, Qia, Vulcanodinium.
Thoracosphaeraceae . Aduncodinium, Amyloodinium, Apocalathium, Blastodinium, Chimonodinium, Cryptoperidiniopsis, Duboscquodinium, Ensiculifera, Leonella, Luciella, Naiadinium, Paulsenella, Pentapharsodinium, Pfiesteria, Scrippsiella, Stoeckeria, Theleodinium, Thoracosphaera, Tintinnophagus, Tyrannodinium.
Podolampadaceae . Blepharocysta, Gaarderiella, Heterobractum, Lissodinium, Mysticella, Podolampas.
Kryptoperidiniaceae ["dinotoms"]. Blixaea, Durinskia, Galeidinium, Kryptoperidinium, Unruhdinium, etc.
Heterocapsaceae . Heterocapsa.
Amphidomataceae . Amphidoma, Azadinium.
Oxytoxaceae . Corythodinium, Oxytoxum.
Centrodiniaceae . Centrodinium.
Dinophysales . Amphisolenia, Citharistes, Dinofurcula, Dinophysis, Histioneis, Latifascia, Metadinophysis, Metaphalacroma, Ornithocercus, Oxyphysis, Parahistioneis, Phalacroma, Pseudophalacroma, Sinophysis, Triposolenia.
Prorocentrales . Mesoporus, Prorocentrum.
Apicomplexa . Incertae sedis genera: Aggregata , Christalloidophora , Dobellia* , Echinococcidium* , Globidiellum* , Joyeuxella* , Rhabdospora* , Spermatobium* , Spiriopsis* , Spirogregarina* , Toxocystis* , Trophosphaera* .
?Agamococcidiorida . Gemmocystis*, Rhytidocystis.
?Protococcidiorida . Angeiocystis*, Coelotropha*, Grellia*, Eleutheroschizon*, Mackinnonia*, Myriosporides*, Myriospora*, Sawayella*.
Aconoidasida [Hematozoa ] (P)
Haemospororida . Dionisia*, Haemocystidium, Haemoproteus, Hepatocystis, Leucocytozoon, Mesnilium*, Nycteria, Parahaemoproteus, Plasmodium, Polychromophilus, Rayella*, Saurocytozoon*.
Piroplasmorida . Anthemosoma*, Babesia, Cytauxzoon, Echinozoon*, Haemohormidium*, Sauroplasma*, Serpentoplasma*, Theileria.
Nephromycida . Nephromyces, Cardiosporidium.
Conoidasida (P)
Coccidia (P)
Adeleorina . Adelea*, Adelina, Babesiosima*, Bartazoon*, Chagasella*, Cyrilia*, Dactylosoma, Desseria*, Ganapatiella*, Gibbsia*, Haemogregarina, Haemolivia, Hepatozoon, Ithania*, Karyolysus, Klossia, Klossiella*, Legerella*, Orcheobius*, Rasajeyna*.
Eimeriorina . Atoxoplasma, Barrouxia*, Besnoitia, Caryospora, Caryotropha, Choleoeimeria, Cyclospora, Cystoisospora, Defretinella*, Diaspora*, Dorisa*, Dorisiella*, Eimeria, Elleipsisoma*, Goussia, Hammondia, Hyaloklossia, Isospora, Lankesterella, Mantonella*, Merocystis, Neospora, Nephroisospora, Ovivora*, Pfeifferinella, Pseudoklossia, Sarcocystis, Schellackia, Selenococcidium*, Selysina*, Spirocystis*, Toxoplasma, Tyzzeria*, Wenyonella*.
Gregarinasina (P). Incertae sedis genera: Digyalum , Exoschizon .
Archigregarinorida (P). Filipodium, Meroselenidium, Merogregarina, Platyproteum, Selenidium, Selenocystis, Veloxidium.
Eugregarinorida (P). Apolocystis*, Amoebogregarina, Ancora, Ascogregarina, Asterophora, Blabericola, Caliculium, Cephaloidophora, Colepismatophila, Cystobia*, Cystocephalus*, Difficilina, Diplauxis*, Enterocystis, Ganymedes, Geneiorhynchus, Gonospora, Gregarina, Heliospora, Hentschelia*, Hirmocystis*, Hoplorhynchus, Lankesteria, Lecudina, Leidyana, Lithocystis, Monocystella*, Monocystis, Nematopsis, Nematocystis*, Neoasterophora*, Paralecudina, Paraschneideria, Phyllochaetopterus, Pileocephalus*, Polyplicarium, Polyrhabdina, Porospora*, Prismatospora, Protomagalhaensia, Psychodiella, Pterospora, Pyxinia, Pyxinioides, Rhabdocystis*, Sphaerorhynchus*, Steinina, Stenophora, Stylocephalus, Sycia*, Syncystis, Thalicola*, Thiriotia, Trichotokara, Uradiophora*, Urospora, Xiphocephalus, Zygosoma*, and more.
Neogregarinorida . Apicystis, Aranciocystis, Caulleryella*, Coelogregarina*, Farinocystis*, Gigaductus*, Lipocystis*, Lipotropha*, Lymphotropha*, Machadoella*, Mattesia, Menzbieria, Ophryocystis, Schizocystis*, Syncystis, Tipulocystis*.
Cryptogregarinorida . Cryptosporidium.
Blastogregarinea . Chattonaria, Siedleckia.
Ciliophora [Ciliata ; Infusoria ]
Postciliodesmatophora
Karyorelictea
Kentrophoridae . Kentrophoros.
Loxodida
Cryptopharyngidae . Cryptopharynx.
Loxodidae . Loxodes.
Geleiidae . Geleia.
Heterotrichea
Blepharismidae . Blepharisma
Climacostomidae . Climacostomum.
Condylostomatidae . Chattonidium, Condylostoma.
Fabreidae . Fabrea.
Gruberiidae . Gruberia.
Coliphorina
Folliculinidae . Folliculina.
Maristentoridae . Maristentor.
Peritromidae . Peritromus.
Spirostomidae . Anigsteinia, Spirostomum.
Stentoridae . Stentor.
Intramacronucleata . Incertae sedis: Protocruziidae [Protocruziidia ] (Protocruzia ).
SAL . Incertae sedis: Cariacotrichea (Cariacothrix caudata), Mesodiniidae (Mesodinium), Phacodiniidia (Phacodinium).
Spirotrichea
Euplotia
Euplotida
Aspidiscidae . Aspidisca.
Certesiidae . Certesia.
Euplotidae . Euplotes.
Gastrocirrhidae . Gastrocirrhus.
Uronychidae . Diophrys, Uronychia.
Discocephalida
Discocephalidae . Discocephalus, Prodiscocephalus, Paradiscocephalus.
Pseudoamphisiellidae . Leptoamphisiella, Pseudoamphisiella.
Perilemmaphora
Hypotrichia
Stichotrichida (P)
Amphisiellidae . Amphisiella, Bistichella.
Atractosidae . Atractos.
Epiclintidae . Epiclintes.
Gonostomatidae . Cotterillia, Gonostomum.
Halteriidae . Halteria, Meseres.
Holostichidae . Holosticha, Uncinata.
Kahliellidae . Deviata, Kahliella.
Keronidae . Kerona.
Oxytrichidae (P). Cyrtohymena, Gastrostyla, Oxytricha, Stylonychia.
Parabirojimidae . Parabirojimia, Tunicothrix.
Plagiotomidae . Plagiotoma.
Psammomitridae . Psammomitra.
Pseudoamphisiellidae . Pseudoamphisiella.
Psilotrichidae . Psilotricha, Urospinula.
Schmidingerotrichidae . Schmidingerothrix.
Spirofilidae . Spirofilopsis, Strongylidium.
Trachelostylidae . Trachelostyla.
Uroleptidae . Paruroleptus, Uroleptus.
Urostylida (P)
Bergeriellidae . Bergeriella, Neourostylopsis.
Hemicycliostylidae . Australothrix, Hemicycliostyla.
Pseudokeronopsidae . Apoholosticha, Pseudokeronopsis.
Pseudourostylidae . Pseudourostyla.
Urostylidae . Bakuella, Diaxonella, Urostyla.
Oligotrichea
Oligotrichida
Cyrtostrombidiidae . Cyrtostrombidium.
Pelagostrombidiidae . Pelagostrombidium.
Strombidiidae . Strombidium (P).
Tontoniidae . Laboea, Tontonia.
Choreotrichida . Incertae sedis: Lynnella [Lynnellidae ; Lynnellida ]
Strobilidiina (P)
Leegaardiellidae . Leegaardiella.
Lohmanniellidae . Lohmanniella.
Strobilidiidae . Strobilidium.
Strombidinopsidae . Strombidinopsis (P).
Tintinnina . Incertae sedis: Helicostomella, Tintinnopsis (P), several other genera.
Ascampbelliellidae . Ascampbelliella
Cyttarocylididae [probably synonymous with Petalotrichidae]. Cyttarocylis.
Dictyocystidae . Dictyocysta.
Epiplocylididae . Epiplocylis.
Eutintinnidae . Dartintinnus, Eutintinnus.
Favellidae . Favella.
Nolaclusiliidae . Nolaclusilis.
Petalotrichidae [probably synonymous with Cyttarocylididae]. Petalotricha.
Ptychocylididae . Cymatocylis, Ptychocylis.
Rhabdonellidae . Metacylis, Rhabdonella, Schmidingerella.
Stenosemellidae (P). Stenosemella.
Tintinnidae . Amphorellopsis, Salpingacantha, Salpingella, Tintinnus.
Tintinnidiidae . Tintinnidium.
Undellidae . Undella.
Xystonellidae . Dadayiella, Parafavella, Xystonella.
Licnophoridae . Licnophora, Prolicnophora.
Kiitrichidae . Caryotricha, Kiitricha.
Lamellicorticata
Armophorea . Incertae sedis: Mylestomatidae (Mylestoma).
Metopida (P)
Metopidae (P). Bothrostoma, Brachonella, Eometopus, Metopus, Parametopidium, Tesnospira.
Apometopidae . Cirranter, Urostomides.
Tropidoatractidae . Palmarella, Tropidoatractus.
Clevelandellida
Clevelandellidae . Clevelandella.
Inferostomatidae . Inferostoma.
Neonyctotheridae . Neonyctotherus.
Nyctotheridae (P). Nyctotherus.
Sicuophoridae . Sicuophora.
Caenomorphidae . Caenomorpha, Ludio, Sulfonecta.
Odontostomatida
Discomorphellidae . Discomorphella.
Epalxellidae . Epalxella, Saprodinium.
Litostomatea
Rhynchostomatia
Dileptida
Dileptidae . Apodileptus, Dileptus, Pseudomonilicaryon.
Dimacrocaryonidae . Dimacrocaryon, Monomacrocaryon, Rimaleptus.
Tracheliidae . Trachelius.
Haptoria (P). Incertae sedis: Chaenea.
Lacrymariidae . Lacrymaria.
Haptorida
Enchelyodonidae . Enchelyodon, Fuscheria.
Homalozoonidae . Homalozoon.
Pleuroplitidae . Pleuroplites.
Didiniidae . Didinium, Monodinium.
Pleurostomatida
Amphileptidae . Amphileptus.
Litonotidae . Litonotus.
Kentrophyllidae . Epiphyllum, Kentrophyllum.
Spathidiida
Acropisthiidae . Acropisthium, Chaenea.
Actinobolinidae . Actinobolina.
Apertospathulidae . Apertospathula.
Enchelyidae . Enchelys.
Pseudoholophryidae . Pseudoholophrya.
Spathidiidae . Legendrea, Spathidium.
Trachelophyllidae . Trachelophyllum.
Helicoprorodontidae
Trichostomatia
Vestibuliferida
Balantidiidae . Balantidium, Neobalantidium (P).
Buetschliidae . Buetschlia.
Paraisotrichidae . Paraisotrichia.
Protocaviellidae . Protocaviella.
Protohalliidae . Protohallia.
Pycnotrichidae . Pycnothrix, perhaps Buxtonella.
Isoendo
Isotrichidae . Dasytricha, Isotricha.
Entodiniomorphida
Blepharocorythina
Blepharocorythidae . Blepharocorys.
Parentodiniidae . Parentodinium.
Pseudoentodiniidae . Pseudoentodinium.
Entodiniomorphina
Cycloposthiidae . Cycloposthium.
Gilchristidae . Gilchristia.
Ophryoscolecidae . Entodinium, Ophryoscolex, Polyplastron.
Polydiniellidae . Polydiniella.
Rhinozetidae . Rhinozeta.
Spirodiniidae . Spirodinium.
Telamodiniidae . Telamodinium.
Troglodytellidae . Troglodytella,.
Macropodiniida
Amylovoracidae . Amylovorax.
Macropodiniidae . Macropodinium.
Polycostidae . Polycosta.
CONTHREEP [Ventrata ]. Incertae sedis: Askenasia , Cyclotrichiidae (Cyclotrichium), Paraspathidium , Pseudotrachelocercidae (Pseudotrachelocerca), Discotrichidae [Discotrichida ] (Discotricha, Lopezoterenia).
Phyllopharyngea
Synhymeniida
Nassulopsidae . Nassulopsis.
Orthodonellidae . Orthodonella, Zosterodasys.
Scaphidiodontidae . Chilodontopsis, Scaphidiodon.
Synhymeniidae . Synhymenia.
Subkinetalia
Cyrtophoria
Chlamydodontida (P)
Chilodonellidae . Chilodonella.
Chitonellidae . Chitonella.
Chlamydodontidae . Chlamydodon.
Gastronautidae . Gastronauta.
Kryoprorodontidae . Gymnozoum.
Lynchellidae . Chlamydonella, Lynchella.
Dysteriida
Dysteriidae . Dysteria (P), Trochilia.
Hartmannulidae (P). Hartmannula.
Kyaroikeidae . Kyaroikeus.
Plesiotrichopidae . Plesiotrichopus.
Chonotrichia
Exogemmida
Chilodochonidae . Chilodochona.
Filichonidae . Filichona.
Helichonidae . Heliochona.
Lobochonidae . Lobochona.
Phyllochonidae . Phyllochona.
Spirochonidae . Spirochona.
Cryptogemmida
Actinichonidae . Actinichona.
Echinichonidae . Echinichona.
Inversochonidae . Inversochona.
Isochonidae . Isochona.
Isochonopsidae . Isochonopsis.
Stylochonidae . Stylochona.
Rhynchodia
Hypocomidae . Hypocoma.
Rhynchodida
Ancistrocomidae . Ancistrocoma.
Sphenophryidae . Sphenophrya.
Suctoria
Exogenida
Allantosomatidae . Allantosoma.
Dentacinetidae . Dentacineta.
Dendrosomididae . Dendrosomides.
Ephelotidae . Ephelota.
Lecanophryidae . Lecanophrya.
Manuelophryidae . Manuelophrya.
Metacinetidae . Metacineta.
Ophryodendridae . Ophryodendron.
Paracinetidae . Paracineta.
Phalacrocleptidae . Phalacrocleptes.
Podophryidae . Podophrya.
Praethecacinetidae . Praethecacineta.
Rhabdophryidae . Rhabdophrya.
Severonidae . Severonis.
Spelaeophryidae . Spelaeophrya.
Tachyblastonidae . Tachyblaston.
Thecacinetidae . Thecacineta.
Endogenida
Acinetidae . Acineta.
Acinetopsidae . Acinetopsis.
Choanophryidae . Choanophrya.
Corynophryidae . Corynophrya.
Dactylostomatidae . Dactylostoma.
Dendrosomatidae . Dendrosoma.
Endosphaeridae . Endosphaera.
Erastophryidae . Erastophrya.
Pseudogemmidae . Pseudogemma.
Rhynchetidae . Rhyncheta.
Solenophryidae . Solenophrya.
Tokophryidae . Tokophrya.
Trichophryidae . Trichophrya.
Evaginogenida
Cometodendridae . Cometodendron.
Cyathodiniidae . Cyathodinium.
Dendrocometidae . Dendrocometes.
Discophryidae . Discophrya.
Enchelyomorphidae . Enchelyomorpha.
Heliophryidae . Heliophrya.
Periacinetidae . Periacineta.
Prodiscophryidae . Prodiscophrya.
Rhynchophryidae . Rhynchophrya.
Stylocometidae . Stylocometes.
Trypanococcidae . Trypanococcus.
Colpodea
Bursariomorphida
Bryometopidae . Bryometopus (P), Thylakidium.
Bursaridiidae . Bursaridium, Paracondylostoma.
Bursariidae . Bursaria.
Colpodida . Incertae sedis: Bardeliellidae (Bardeliella), Hausmanniellidae (Avestina, Hausmanniella), Ilsiellidae (Ilsiella), Pseudochlamydonellidae (Hackenbergia, Pseudochlamydonella) and Marynidae (Maryna).
Bryophryina
Bryophryidae . Bryophrya.
Sandmanniellidae . Sandmanniella.
Colpodina
Colpodidae (P). Colpoda.
Grandoriidae . Grandoria.
Tillinidae . Tillina.
Grossglockneriidae [Grossglockneriina ]. Grossglockneria, Pseudoplatyophrya.
Cyrtolophosidida
Cyrtolophosididae . Cyrtolophosis.
Kreyellidae . Kreyella.
Platyophryida
Ottowphryidae . Ottowphrya, Platyophryides.
Platyophryidae (P). Platyophrya.
Sagittariidae . Sagittaria.
Sorogenidae . Sorogena.
Woodruffiidae . Etoschophrya, Rostrophrya, Woodruffia.
Nassophorea (P)
Colpodidiidae . Colpodidium.
Nassulida
Furgasoniidae . Furgasonia, Wolfkosia.
Nassulidae . Nassula, Obertrumia.
Microthoracida
Microthoracidae . Drepanomonas, Microthorax.
Leptopharyngidae . Leptopharynx, Pseudomicrothorax.
Prostomatea (P)
Apsiktratidae [Prostomatida ]
Balanionidae . Balanion.
Cryptocaryonidae . Cryptocaryon.
Colepidae . Coleps, Plagiopogon.
Holophryidae . Holophrya.
Lagynidae . Lagynus.
Metacystidae . Metacystis, Vasicola.
Placidae . Placus.
Plagiocampidae . Plagiocampa.
Prorodontidae . Prorodon.
Urotrichidae . Urotricha.
Plagiopylea
Plagiopylida
Epalxellidae . Epalxella, Saprodinium.
Plagiopylidae . Plagiopyla.
Sonderiidae . Sonderia.
Trimyemidae . Trimyema.
Oligohymenophorea
Apostomatia
Apostomatida
Colliniidae . Collinia, Metacollinia.
Cyrtocaryidae . Cyrtocaryum.
Foettingeriidae . Foettingeria.
Pseudocolliniidae . Fusiforma, Pseudocollinia.
Astomatophorida
Opalinopsidae . Opalinopsis.
Pilisuctorida
Conidophryidae . Conidophrys.
Astomatia
Anoplophryidae . Anoplophrya.
Buetschliellidae . Buetschliella.
Clausilocolidae . Clausilocola.
Contophryidae . Contophyra.
Haptophryidae . Haptophrya.
Hoplitophryidae . Hoplitophrya.
Intoshellinidae . Intoshellina.
Maupasellidae . Maupasella.
Radiophryidae . Radiophrya.
Hymenostomatia
Tetrahymenida . Incertae sedis: Trichospiridae (Trichospira).
Curimostomatidae . Curimostoma.
Glaucomidae . Glaucoma.
Spirozonidae . Spirozona.
Tetrahymenidae . Tetrahymena.
Turaniellidae . Colpidium, Dexiostoma, Turaniella.
Ophryoglenida
Ichthyophthiriidae . Ichthyophthirius.
Ophryoglenidae . Ophryoglena.
Peniculia (P)
Peniculida
Clathrostomatidae . Clathrostoma.
Frontoniidae . Disematostoma, Frontonia (P).
Lembadionidae . Lembadion.
Maritujidae . Marituja.
Neobursaridiidae . Neobursaridium.
Parameciidae . Paramecium.
Paranassulidae . Paranassula.
Stokesiidae . Stokesia.
Urocentridae [Urocentrida ]
Peritrichia
Sessilida
Astylozoidae . Astylozoon, Hastatella.
Ellobiophryidae . Ellobiophrya.
Epistylididae . Epistylis.
Lagenophryidae . Lagenophrys.
Operculariidae . Opercularia.
Rovinjellidae . Rovinjella.
Scyphidiidae (P). Scyphidia.
Termitophryidae . Termitophrya.
Usconophryidae . Usconophrys.
Vaginicolidae . Cothurnia, Pyxicola, Thuricola, Vaginicola.
Vorticellidae . Carchesium, Epicarchesium (P), Ophrydium, Pelagovorticella, Pseudovorticella (P), Vorticella (P).
Zoothamniidae . Haplocaulus, Zoothamnium.
Mobilida
Polycyclidae . Polycycla.
Trichodinidae . Trichodina.
Trichodinopsidae . Trichodinopsis.
Urceolariidae . Leiotrocha, Urceolaria.
Scuticociliatia (P)
Philasterida
Cohnilembidae . Cohnilembus.
Cryptochilidae . Cryptochilum.
Entodiscidae . Entodiscus.
Entorhipidiidae . Entorhipidium.
Orchitophryidae (P). Orchitophrya.
Paralembidae . Anophrys, Paralembus.
Parauronematidae (P). Parauronema (P).
Philasteridae . Kahlilembus, Philaster.
Pseudocohnilembidae . Pseudocohnilembus.
Schizocaryidae . Schizocaryum.
Thigmophryidae . Thigmophrya.
Thyrophylacidae . Thyrophylax.
Uronematidae . Uronema.
Urozonidae . Urozona.
Pleuronematida
Calyptotrichidae . Calyptotricha.
Conchophthiridae . Conchophthirus.
Ctedoctematidae . Ctedoctema.
Cyclidiidae (P). Cristigera, Cyclidium.
Dragescoidae . Dragescoa.
Eurystomatellidae . Eurystomatella.
Histiobalantiidae . Histiobalantium.
Peniculistomatidae . Peniculistoma.
Pleuronematidae (P). Pleuronema.
Thigmocomidae . Thigmocoma.
Thigmotrichida
Ancistridae . Ancistrum.
Hemispeiridae . Hemispeira.
Hysterocinetidae . Hysterocineta.
Paraptychostomidae . Paraptychostomum.
Loxocephalida (P)
Cinetochilidae (P). Cinetochilum, Sathrophilus.
Loxocephalidae . Cardiostomatella, Dexiotricha, Loxocephalus.
Rhizaria
?Gymnosphaerida . Actinocoryne, Cienkowskya, Gymnosphaera, Hedraiophrys [possible synonym of Cienkowskya], Wagnerella.
Cercozoa [Filosa ]. Incertae sedis cercozoan genera: ?Dictiomyxa, ?Katabia, ?Myxodictyium, ?Pontomyxa, ?Protomyxa, ?Protogenes, ?Pseudospora, ?Rhizoplasma.
?Discocelia [Discocelis ]
?Psammonobiotidae* . Alepiella, Chardezia, Edaphonobiotus, Feuerbornia, Frenzelina, Lesquerella, Micramphora, Micropsammella, Nadinella, Ogdeniella, Psammonobiotus, Propsammonobiotus, Rhumbleriella.
Sarcomonadea (P)
Cercomonadida [Cercomonadidae ; Cercobodonidae ]. Cercomonas, Eoercomonas, Filomonas, Neocercomonas, Cavernomonas.
Paracercomonadida [Paracercomonadidae ]. Brevimastigomonas, Metabolomonas, Nucleocercomonas, Paracercomonas, Phytocercomonas.
Glissomonadida [Heteromitidae ]
Saccharomycomorphidae . Saccharomycomorpha.
Sandonidae . Sandona, Flectomonas, Neoheteromita, Mollimonas.
Dujardinidae . Dujardina.
Bodomorphidae . Bodomorpha.
Proleptomonadidae . Proleptomonas.
Allapsidae . Allapsa, Teretomonas, Allantion.
Viridiraptoridae . Orciraptor, Viridiraptor.
Pansomonadidae . Agitata, Aurigamonas.
Sainouroidea [Helkesida ]
Sainouridae . Acantholus, Cholamonas, Homocognata, Sainouron.
Helkesimastigidae . Helkesimastix.
Guttulinopsidae . Guttulinopsis, Olivorum, Puppisaman, Rosculus.
Thecofilosea
?Mataza
Phaeodarea [Tripylea ]
Phaeoconchia . Coelodendrum, Coelographis, Conchellium, Conchopsis.
Phaeocystina . Aulacantha, Aulographis, Cannoraphis.
Phaeogromia . Castanella, Challengeron, Haeckeliana, Medusetta, Tuscarora.
Phaeosphaeria . Aulosphaera, Cannosphaera, Sagosphaera.
Cryomonadida
Rhogostomidae . Rhogostoma, Sacciforma, Capsellina.
Protaspidae [Cryomonadidae ]. Cryothecomonas, Protaspa.
Ventricleftida
Ventrifissuridae . Ventrifissura.
Verrucomonadidae . Verrucomonas.
Tectofilosida
Chlamydophryidae . Chlamydophryse, Diaphoropodon, Lecythium, Trachyrhizium.
Psammonobiotidae . Micropsamella.
?Volutellidae . Pseudovolutella, Volutella.
Fiscullina
Fiscullidae . Fisculla, Omnivora.
Pseudodifflugiidae . Pseudodifflugia.
Rhizaspididae . Rhizaspis.
Ebriacea [Ebriidae ; Ebriida ]. Ebria, Hermesinum, Botuliforma.
Imbricatea
Spongomonadida [Spongomonadidae ]. Rhipidodendron, Spongomonas.
Marimonadida
Abolliferidae . Abollifer, Cowlomonas, ?Heterochromonas.
Auranticordidae . Auranticordis, Rhabdamoeba.
Cyranomonadidae . Cyranomonas.
Pseudopirsoniidae . Pseudopirsonia.
Variglissida
Clautriaviidae . Clautriavia.
Nudifilidae . Nudifila.
Quadriciliidae . Quadricilia.
Silicofilosea
Thaumatomonadida [Thaumatomastigidae ]
Thaumatomonadidae . Allas, Hyaloselene, Reckertia, Thaumatomonas, Thaumatomastix, Ovaloplaca, Scutellomonas, Thaumatospina, Penardeugenia.
Peregriniidae . Gyromitus, Peregrinia.
Esquamulidae . Esquamula.
Euglyphida . Incertae sedis: Phaeobola.
Cyphoderiidae . Campascus*, Corythionella, Cyphoderia, Messemvriella*, Pseudocorythion, Schaudinnula*.
Paulinellidae . Micropyxidiella, Ovulinata, Paulinella.
Euglyphina
Assulinidae . Assulina, Placocista, Valkanovia*.
Sphenoderiidae . Sphenoderia, Trachelocorythion, Deharvengia*.
Trinematidae . Corythion, Playfairina*, Puytoracia*, Trinema.
Euglyphidae . Euglypha, Scutiglypha.
Tracheleuglypha
Trivalvulariida . Leptogromia, Trivalvularis.
Metromonadea . Metromonas, Metopion, Micrometopion, Kiitoksia.
Granofilosea . Incertae sedis granofilosean genera*: ?Apogromia, ?Kibisidytes, ?Leucodictyon, ?Limnofila, ?Mesofila, ?Microcometes, ?Microgromia, ?Nanofila, ?Reticulamoeba and probably ?Belaria, ?Ditrema, ?Heliomorpha [=Dimorpha] and ?Paralieberkuehnia.
Massisteridae . Massisteria, Minimassisteria.
Clathrulinidae [Desmothoracida ]. Actinosphaeridium, Cienkowskya*, Clathrulina, Hedriocystis, Penardiophrys, ?Servetia.
Chlorarachnea . Amorphochlora, Bigelowiella, Chlorarachnion, Cryptochlora, Gymnochlora, Lotharella, Minorisa, Partenskyella, Viridiuvalis.
Endomyxa .
Vampyrellida [Aconchulinida ]. Incertae sedis: Arachnula, Gobiella, Lateromyxa, Penardia.
Thalassomyxa
Vampyrellidae . Vampyrella.
Leptophryidae . Arachnomyxa, Leptophrys, Planctomyxa, Platyreta, Theratromyxa, Vernalophrys.
Placopodidae [Hyalodiscidae ]. Placopus.
Sericomyxidae . Sericomyxa.
Phytomyxea
Marinomyxa
Plasmodiophorida [Plasmodiophorales ; Plasmodiophoromycota ]. Plasmodiophora [Ostenfeldiella], Polymyxa, Woronina, Ligniera [Anisomyxa; Rhizomyxa; Sorolpidium], Sorosphaerula [Tuburcinia; Sorosporium], Spongospora [Clathrosorus], ?Membranosorus, ?Octomyxa, ?Polymyxa, ?Sorodiscus, ?Tetramyxa [Molliardia; Thecaphora].
Phagomyxida . Phagomyxa, Maullinia.
Filoreta
Gromia
Ascetosporea
Haplosporida . Bonamia, Haplosporidium, Minchinia, Urosporidium.
Mikrocytida . Mikrocytos, Paramikrocytos.
Paramyxida . Marteilia, Paramyxa, Paramarteilia, Marteilioides, Eomarteilia.
Claustrosporidium
Paradiniida . Paradinium.
Retaria
Foraminifera . Incertae sedis groups: ?Lagenida, ?Heterogromia, ?Komokiacea*.
Monothalamids (P) [currently under revision]. All genera traditionally in Allogromiida, Astrorhizida, and the Xenophyophorea. Genera unplaced into families: Allogromia, Astrammina, Crithionina, Notodendrodes, Psammophaga, Bathysiphon.
Nujappikia
Allogromiidae . Vellaria.
Lieberkuehniidae . Lieberkuehnia, Claparedellus.
Edaphoallogromiidae . Edaphoallogromia.
Lacogromiidae . Lacogromia.
Limnogromiidae . Limnogromia.
Reticulomyxidae . Reticulomyxa, Dracomyxa, Haplomyxa, Wobo.
Schizamminidae . Jullienella, Schizammina, Spiculosiphon.
Velamentofexidae . Velamentofex.
Tubothalamea . Fusulinida probably belongs to this group.
Miliolida . Alveolina, Cornuspira, Miliammina, Pyrgo, Quinqueloculina, Sorites.
Spirillinida . Patellina, Spirillina.
Ammodiscidae . Ammodiscus, Glomospira.
Globothalamea
Rotaliida
Planorbulinidae . Planorbulinella, Hyalinea.
Discorboidea
Discorbidae . Discorbis.
Rosalinidae . Rupertina, Discanomalina, "Rosalina", Gavelinopsis, Planorbulina.
Rotalioidea . Incertae sedis genera: ?Criboelphidium, ?"Elphidium", ?Protelphidium.
Elphidiidae . Elphidium.
Ammoniidae . Ammonia.
Elphidiellidae . Elphidiella.
Haynesinidae . Haynesina, Aubignyna.
Glabratelloidea
Rotaliellidae . Rotaliella, Rossyatella.
Buliminoididae . Buliminoides.
Glabratellidae . Glabratella, Glabratellina, Angulodiscorbis, Planoglabratella.
Calcarinoidea
Calcarinidae . Neorotalia, Baculogypsina, Baculogypsinoides, Schlumbergerella, Pararotalia.
Nummulitoidea
Nummulitidae . Nummulites, Operculinella, Cycloclypeus, Heterostegina, Operculina, Planoperculina, Planostegina.
Serioidea
Uvigerinidae . Uvigerina, Rectuvigerina, Trifarina.
Bolivinitidae . Bolivina, Brizalina, Saidovina.
Cassidulinidae . Globocassidulina, Cassidulinoides, Evolvocassidulina, Islandiella, Ehrenbergina
Sphaeroidinidae . Sphaeroidina.
Globobuliminidae . Globobulimina.
Incertae sedis Rotaliida families:
?Nonionidae . Nonion, Nonionella, Nonionellina, Nonionoides.
?Virgulinellidae . Virgulinella.
?Buliminidae . Bulimina.
?Epistominellidae . Epistominella.
?Stainforthiidae . Stainforthia, Gallitellia.
?Cibicididae . Cibicides, Cibicidoides, Heterolepa.
?Chilostomellidae . Chilostomella.
?Pullenidae . Pullenia.
?Nuttalidae . Nuttalides.
?Discorbinellidae . Discorbinella, Hanzawaia.
?Astrononionidae . Astrononion.
?Oridorsalidae . Oridorsalis.
?Melonidae . Melonis.
?Cymbaloporidae . Cymbaloporella.
?Rubratelliidae . Rubratella.
?Murrayinelliidae . Murrayinella.
Globigerinida (P)
Parvularugoglobigerinoidea
Parvularuglobigerinidae . Pseudocaucasina, Palaeoglobigerina, Parvularugoglobigerina.
Eoglobigerinoidea
Eoglobigerinidae . Alicantina, Eoclavatorella, Eoglobigerina, Parasubbotina, Pseudoglobigerinella, Subbotina, Turbeogloborotalia.
Globoquadrinidae . Dentoglobigerina, Globoquadrina.
Neoacarininidae . Neoacarinina.
Porticulasphaeridae . Globigerinatheka, Guembelitrioides, Inordinatosphaera, Orbulinoides, Porticulasphaera.
Globigerinoidea
Globigerinidae . Alloglobigerinoides, Ciperoella, Globigerina, Globicuniculus, Globigerinoides, Globigerinoidesella, Globoturborotalita, Trilobigerina [Trilobatus], Zeaglobigerina.
Globigerinellidae . Beella, Bolliella, Globigerinella, Orcadia, Protentella, Quiltyella.
Hastigerinidae . Hastigerina, Hastigerinella, Hastigerinopsis.
Orbulinidae . Biorbulina, Candorbulina, Orbulina, Praeorbulina.
Sphaeroidinellidae . Prosphaeroidinella, Sphaeroidinella, Sphaeroidinellopsis.
Turborotalitidae . Berggrenia, Turborotalita.
Globorotalioidea
Catapsydracidae . Catapsydrax, Globigerinopsoides, Globigerinoita, Velapertina.
Globorotaloididae . Clavatorella, Globorotaloides, Protentelloides.
Globorotaliidae . Dentigloborotalia, Globoconella, Globorotalia, Hirsutella, Jenkinsella, Menardella, Neogloboquadrina, Paragloborotalia, Truncorotalia.
Pulleniatinidae . Pulleniatina.
Globanomalinidoidea
Globanomalinidae . Carinoturborotalia, Globanomalina, Luterbacheria, Planoglobanomalina, Turborotalia.
Hantkeninoidea
Pseudohastigerinidae . Pseudohastigerina.
Hantkeninidae . Applinella, Aragonella, Clavigerinella, Cribrohantkenina, Hantkenina.
Truncorotaloidinoidea
Globigerapsidae . Globigerapsis, Muricoglobigerina.
Planorotalitidae . Astrorotalia, Planorotalites.
Truncorotaloididae . Acarinina, Igorina, Morozovella, Morozovelloides, Pearsonites, Praemurica, Pseudogloboquadrina, Testacarinata, Truncorotaloides.
Globotruncanida
Abathomphaloidea
Abathomphalidae . Abathomphalus.
Globotruncanellidae . Globotruncanella, Spinoglobotruncanella.
Favuselloidea
Conoglobigerinidae . Conoglobigerina, Tenuigerina, ?Sphaerogerina.
Favusellidae . Ascoliella, Favusella, Koutsoukosia.
Globuligerinidae . Compactogerina, Globuligerina, Haeuslerina, Petaloglobigerina.
Hedbergelloidea
Ananiidae . Anania, Badriella, Costellagerina, Hillsella, Liuenella [Liuella], Loeblichella, Muricohedbergella, Paracostellagerina, Pessagnoina, Planohedbergella, Pseudoclavihedbergella, Vanhintella.
Hedbergellidae . Asterohedbergella, Clavihedbergella, Hedbergella, Microhedbergella, Paraticinella, Pseudoguembelitria.
Helvetoglobotruncanidae . Angulocarinella, Bermudeziana, Bollitruncana, Fingeria, Hedbergellita, Brittonella, Helvetoglobotruncana, Unitruncatus, Whiteinella.
Praehedbergellidae . Blefuscuiana, Gorbachikella, Praehedbergella, Lilliputianella, Lilliputianelloides, Wondersella.
Globotruncanoidea
Globotruncanidae . Contusotruncana, Globotruncana, Marginotruncana, Obliquacarinata, Sphaerotruncana, Ventrotruncana.
Praeglobotruncanidae . Concavatotruncana, Dicarinella, Falsotruncana, Rotundina, Praeglobotruncana, Verotruncana.
Reissidae . Elevatotruncana, Globotruncanita, Kassabiana, Radotruncana, Sigalitruncana, Turbotruncana.
Planomalinoidea
Eohastigerinellidae . Eohastigerinella, Hastigerinoides.
Globigerinelloididae . Alanlordella, Allotheca, Biglobigerinella, Blowiella, Claviblowiella, Globigerinelloides, Pseudoschackoina.
Planomalinidae . Bannerina, Planomalina, Pseudoplanomalina.
Schackoinidae . Asymetria, Groshenyia, Leupoldina, Neoschackoina, Schackoina.
Rotaliporoidea
Rotaliporidae . Anaticinella, Pseudothalmanninella, Rotalipora, Thalmanninella.
Ticinellidae . Biticinella, Claviticinella, Ticinella.
Rugoglobigerinoidea
Helvetiellidae . Archaeoglobigerina, Bucherina, Dorbignya, Edgarinella, Gandolfia, Gansserina, Globocarinata, Helvetiella, Kuglerina.
Rugoglobigerinidae . Archaeoglobitruncana, Plummerita, Rugoglobigerina, Rugosocarinata, Rugotruncana, Trinitella.
Heterohelicida
Heterohelicoidea
Gublerinidae . Gublerina, Lipsonia, Praegublerina.
Heterohelicidae . Braunella, Bronnimannella, Ehrenbergites, Globoheterohelix, Fleisherites, Hartella, Heterohelix, Huberella, Laeviheterohelix, Lazarusina, Lunatriella, Magellanina, Mihaia, Nederbragtina, Planoheterohelix, Protoheterohelix, Pseudoplanoglobulina, Steineckia, Striataella, Texasina, ?Bifarina, ?Rectoguembelina, ?Zeauvigerina.
Pseudotextulariidae . Planoglobulina, Pseudotextularia, Racemiguembelina.
Pseudoguembelinidae . Eicheriella, Leptobimodalia, Pseudoguembelina.
Spiroplectidae . Hendersonites [Hendersonia], Neohendersonites, Paraspiroplecta, Spiroplecta.
Ventilabrellidae . Planulitella, Proliferania, Sigalia, Ventilabrella.
Guembelitriida
Cassigerinelloidea
Cassigerinellidae . Cassigerinella, Riveroinella.
Guembelitrioidea
Guembelitriidae . Cassigerinelloita, Guembelitria, Chiloguembelitria, Jenkinsina, ?Archaeoguembelitria, ?Gallitellia, ?Guembelitriella.
Chiloguembelinoidea
Chiloguembelinidae . Chiloguembelina, Woodringina, ?Streptochilus.
Globoconusoidea
Globoconusidae . Globoconusa, Trochoguembelitria,
Order ? (unnamed)
Globigerinitoidea
Candeinidae . Candeina.
Globigerinatellidae . Globigerinatella.
Globigerinitidae . Globigerinita, Mutabella, Polyperibola, Tinophodella.
Tenuitellidae . Praetenuitella, Tenuitella, Tenuitellinata, Tenuitellita.
Family ? (unnamed). Dipsidripella, ?Antarcticella.
Robertinida . Hoeglundina, Robertina, Robertinoides.
Textulariida (P). Cyclammina, Eggerella, Reophax, Textularia, Trochammina.
Carterinida . Carterina.
Radiolaria
Acantharea
Chaunocanthida . Amphiacon, Conacon, Gigartacon, Heteracon, Stauracon.
Holocanthida . Acanthochiasma, Acanthocolla, Acanthoplegma.
Symphyacanthida . Amphilithium, Astrolonche, Pseudolithium.
Arthracanthida . Acanthometra, Daurataspis, Dictyacantha, Diploconus, Phractopelta, Phyllostaurus, Pleuraspis, Stauracantha.
Taxopodida . Sticholonche.
Polycystinea
Spumellaria . Actinomma, Didymocyrtis, Euchitonia, Hexacontium, Hexalonche, Hexastylus, Octodendron, Plegmosphaera, Saturnalis, Spongaster, Spongosphaera.
Nassellaria . Artostrobus, Eucyrtidium, Lithomelissa, Pterocanium, Pterocorys.
Collodaria . Acrosphaera, Collosphaera, Collozoum, Sphaerozoum, Rhaphidozoum, Siphonsphaera, Thalassicolla.
Orodaria
Oroscenidae [Orosphaerida ; Orosphaeridae ]. Oroscena, Orostaurus, Oropelex. Nomina dubia genera: Orosphaera, Orodictyum, Orona, Oronium.
Thalassothamnidae [Cytocladidae ]. Thalassothamnus, Cytocladus, ?Triassothamnus. Nomen dubium genus: Conostylus.
Aquavolonida . Aquavolon, Lapot gusevi.
Tremulida . Tremula.
Haptista
Haptophyta
Pavlovales [Pavlovophyceae ]. Diacronema, Exanthemachrysis, Pavlova, Rebecca.
Prymnesiophyceae
Prymnesiales . Chrysochromulina, Chrysocampanula, Dicrateria, Haptolina, Prymnesium, Pseudohaptolina.
Phaeocystales . Phaeocystis.
Isochrysidales . Emiliania, Gephyrocapsa, Isochrysis, Ruttnera, Tisochrysis.
Coccolithales . Balaniger, Calciosolenia, Coccolithus, Hymenomonas, Chrysotila, Wigwamma.
Rappephyceae
Pavlomulinales . Pavlomulina.
Centroplasthelida [Centrohelea ; Centroheliozoa ]
?Parasphaerastrum.
?Spiculophryidae . Spiculophrys.
Pterocystida
Raphidista
Choanocystidae . Choanocystis.
Raphidiophryidae . Raphidiophrys.
Pterista
Oxnerellidae . Oxnerella.
Pterocystidae . Pterocystis, Raineriophrys, Chlamydaster, Pseudoraphidiophrys, Pseudoraphidocystis.
Heterophryidae . Heterophrys, Sphaerastrum.
Panacanthocystida
Yogsothothidae [Chthonida ; Yogsothothina ]. Yogsothoth.
Acanthocystida
Marophryidae [Marophryina ]. Marophrys.
Chalarothoracina
Acanthocystidae . Acanthocystis.
Raphidocystidae . Raphidocystis.
Cryptista
Palpitomonas bilix
Cryptophyceae [Cryptophyta ; Cryptophyta ]
?Bjornbergiella
Cryptomonadales . Chroomonas, Cryptomonas, Falcomonas, Geminigera, Guillardia, Hanusia, Hemiselmis, Plagioselmis, Proteomonas, Rhinomonas, Rhodomonas, Storeatula, Teleaulax.
Cyathomonadacea . Goniomonas [previously Cyathomonas], Hemiarma.
Kathablepharidacea [Kathablepharidae ; Leucocryptea ]. Hatena, Kathablepharis, Leucocryptos, Platychilomonas, Roombia.
Incertae sedis Eukarya
Meteora sporadica
Hemimastigophora
Spironemidae . Hemimastix, Spironema, Stereonema.
Spironematellidae . Spironematella.
?Paramastix
Excavates (P)
Malawimonadida
Malawimonadidae . Gefionella, Malawimonas.
Imasidae . Imasa.
Metamonada
?Barthelona
Anaeramoebae [Anaeramoebidae ]. Anaeramoeba.
Fornicata
"Carpediemonas-like organisms" (P). Aduncisulcus, Carpediemonas, Dysnectes, Ergobibamus, Hicanonectes, Kipferlia.
Diplomonadida
Hexamitinae . Enteromonas, Gyromonas*, Hexamita, Spironucleus, Trepomonas, Trigonomonas*, Trimitus.
Giardiinae . Brugerolleia*, Giardia, Octomitus.
Retortamonadida (P). Chilomastix, Retortamonas.
Caviomonadidae . Caviomonas*, Iotanema.
Parabasalia
?Tricercomitus
Trichomonadida . Cochlosoma, Dientamoeba, Lacusteria, Pentatrichomonas, Pentatrichomonoides, Pseudotrichomonas, Pseudotrypanosoma, Tetratrichomonas, Trichomonas, Trichomonoides, Trichomitopsis.
Honigbergiellida (P?). Ditrichomonas, Cthulhu, Cthylla, Hexamastix, Honigbergiella, Monotrichomonas.
Hypotrichomonadida . Hypotrichomonas, Trichomitus.
Tritrichomonadida (P?). Dientamoeba, Histomonas, Monocercomonas, Parahistomonas, Simplicimonas, Tritrichomonas.
Cristamonadida . Caduceia, Calonympha, Coronympha, Deltotrichonympha, Devescovina, Foaina, Gigantomonas, Joenia, Joenina, Joenoides, Joenopsis*, Kofoidia, Koruga, Macrotrichomonas, Macrotrichomonoides, Metadevescovina, Mixotricha, Pachyjoenia*, Projoenia*, Pseudodevescovina, Rhizonympha*, Snyderella, Stephanonympha.
Spirotrichonymphida . Holomastigotes*, Holomastigotoides, Microjoenia*, Micromastigotes*, Rostronympha*, Spiromastigotes*, Spironympha*, Spirotrichonympha*, Spirotrichonymphella, Uteronympha*.
Lophomonadida . Lophomonas.
Trichonymphida . Barbulanympha, Eucomonympha, Heliconympha, Hoplonympha, Leptospironympha, Macrospironympha*, Pseudotrichonympha, Rhynchonympha*, Spirotrichosoma*, Staurojoenina, Teranympha, Trichonympha, Urinympha.
Preaxostyla
Oxymonadida . Barroella, Blattamonas, Brachymonas, Dinenympha, Microrhopalodina, Monocercomonoides, Notila, Opisthomitus, Oxymonas, Paranotila, Polymastix, Pyrsonympha, Sauromonas, Saccinobaculus, Streblomastix, Tubulimonoides.
Trimastigidae . Trimastix.
Paratrimastigidae . Paratrimastix.
Discoba
Jakobida
Ophirinina
Agogonidae . Agogonia.
Ophirinidae . Ophirina.
Andalucina
Andaluciidae . Andalucia.
Stygiellidae . Stygiella, Velundella.
Histionina . Histiona, Jakoba, Moramonas, Reclinomonas, Seculamonas nomen nudum.
Tsukubamonadida . Tsukubamonas.
Heterolobosea [Percolozoa ]
Pharyngomonada . Pharyngomonas
Tetramitia
Selenaionidae . Dactylomonas, Selenaion.
Neovahlkampfiidae . Neovahlkampfia.
Eutetramitia
Vahlkampfiidae (P). Fumarolamoeba, Heteramoeba, Naegleria, Neovahlkampfia, Paravahlkampfia, Tetramitus, Vahlkampfia, Willaertia.
Gruberellidae . Gruberella*, Stachyamoeba.
Acrasidae . Acrasis, Allovahlkampfia, Pocheina.
Percolomonadidae . Percolomonas.
Psalteriomonadidae . Harpagon, Psalteriomonas, Monopylocystis, Pseudoharpagon, Sawyeria.
Stephanopogonidae . Stephanopogon.
Creneidae . Creneis.
Tulamoebidae . Pleurostomum, Tulamoeba.
Euglenozoa
Euglenida
Heteronematina (P). Anisonema, Atraktomonas, Biundula, Calycimonas, Decastava, Dolium, Dinema, Dylakosoma, Entosiphon, Heteronema, Jenningsia, Keelungia, Lentomonas, Neometanema, Notosolenus, Pentamonas, Peranema, Peranemopsis, Petalomonas, Ploeotia, Scytomonas, Serpenomonas, Sphenomonas, Teloprocta, Tropidoscyphus, Urceolus.
Aphagea . Astasia sensu stricto, Distigma, Gyropaigne, Menoidium, Parmidium, Rhabdomonas.
Euglenophyceae [Euglenea ]
Rapaza
Eutreptiales . Eutreptia, Eutreptiella.
Euglenales
Phacaceae . Discoplastis, Lepocinclis, Phacus.
Euglenaceae . Ascoglena, Colacium, Cryptoglena, Euglena, Euglenaformis, Euglenamorpha, Euglenaria, Euglenopsis, Hegneria, Klebsina, Monomorphina, Strombomonas, Trachelomonas.
Diplonemea
Diplonemidae . Diplonema, Rhynchopus, Lacrimia, Sulcionema, Flectonema.
Hemistasiidae . Hemistasia.
Eupelagonemidae . Eupelagonema.
Symbiontida . Bihospites, Calkinsia, Postgaardi.
Kinetoplastea . Incertae sedis genera: ?Bordnamonas, ?Cephalothamnium, ?Rhynchoidomonas.
Prokinetoplastina . Ichthyobodo, Perkinsela.
Metakinetoplastina
Neobodonida . Actuariola, Avlakibodo, Azumiobodo, Cruzella, Cryptaulax, Dimastigella, Klosteria, Neobodo, Phanerobia, Rhynchobodo, Rhynchomonas.
Parabodonida . Cryptobia, Jarrellia, Parabodo, Procryptobia, Trypanoplasma.
Eubodonida . Bodo.
Trypanosomatida . Angomonas, Blechomonas, Leptomonas, Paratrypanosoma, Sergeia, Strigomonas, Wallaceina, Phytomonas, Trypanosoma.
Leishmaniinae . Borovskyia, Crithidia, Leptomonas, Lotmaria, Novymonas, Porcisia, Zelonia, Endotrypanum, Leishmania.
Clades basal to Amorphea
CRuMs [Varisulca ; Crumalia ]
Collodictyonidae [Diphylleidae ; Diphylleida ; Diphyllatea , Sulcomonadidae ]. Collodictyon, Diphylleia [Aulacomonas], Sulcomonas.
Rigifilida [Hilomonadea ]. Micronuclearia, Rigifila.
Mantamonadida [Glissodiscea ]. Mantamonas.
Ancyromonadida [Planomonadida ; Planomonadea ; Planomonada ]. Ancyromonas, Fabomonas, Nutomonas, Planomonas.
Genera of uncertain affiliation
Acinetactis, Actinastrum, Actinocoma, Actinolophus, Adinomonas, Aletium, Amphimonas, Amylophagus, Anaeramoeba, Aphelidiopsis, Asterocaelum, Asthmatos, Aurospora, Barbetia, Berkeleyaesol, Belaria, Belonocystis, Bertarellia, Bertramia, Bodopsis, Boekelovia, Branchipocola, Camptoptyche, Chalarodora, Cibdelia, Cichkovia, Cinetidomyxa, Cingula, Cladomonas, Clathrella, Codonoeca, Coelosporidium, Copromonas, Cyanomastix, Cyclomonas, Cytamoeba, Dallingeria, Dictyomyxa, Dimastigamoeba, Dinemula, Dinoasteromonas, Diplocalium, Diplomita, Diplophysalis, Diploselmis, Dobellina, Ducelleria, Ectobiella, Elaeorhanis, Embryocola, Endamoeba, Endemosarca, Endobiella, Endomonas, Endospora, Enteromyxa, Eperythrocytozoon, Errera, Fromentella, Gweamonas, Gymnococcus, Gymnophrydium, Haematotractidium, Hartmannina, Heliobodo, Heliomonas, Hermisenella, Heterogromia, Hillea, Hyalodaktylethra, Immanoplasma, Isoselmis, Janickina, Kamera, Lagenidiopsis, Liegeosia, Luffisphaera, Lymphocytozoon, Lymphosporidium, Macappella, Magosphaera, Malpighiella, Martineziella, Megamoebomyxa, Meringosphaera, Microcometes, Monochrysis, Monodus, Mononema, Myrmicisporidium, Naupliicola, Nephrodinium, Neurosporidium, Orbulinella, Ovicola, Palisporomonas, Pansporella, Paradinemula, Parakaryon, Paraluffisphaera, Paramonas, Paraplasma, Parastasia, Parastasiella, Peliainia, Peltomonas, Petasaria, Phagodinium, Phanerobia, Phloxamoeba, Phyllomitus, Phyllomonas, Physcosporidium, Piridium, Pleuophrys, Pleuromastix, Protenterospora, Protomonas, Pseudoactiniscus, Pseudosporopsis, Rhizomonas, Rhynchodinium, Rigidomastix, Schewiakoffia, Sergentella, Serpentoplasma, Sphaerasuctans, Spongastericus, Spongocyclia, Stephanomonas, Strobilomonas, Tetradimorpha, Tetragonidium, Thaulirens, Topsentella, Toshiba, Trichonema, Urbanella.
See also
Cavalier-Smith's system of classification
Protist
Protists in the fossil record
Notes
References
External links
EukMap – Taxonomy Map of the UniEuk Project
Taxonomy
Eukaryote taxonomy