Microarray Analysis and Report - PGx Software Terms of Use
Last Modified: April 23, 2021
By accessing or using this application, PGx Analysis – Microarray App, (the “Products”), or accessing or using any of thecontent available within the Products, you as the end-user of the Products (hereinafter, “you”, “your” or any derivative
thereof) agree to be bound by the terms and conditions set forth below (the “Terms”). Before continuing, please read thisdocument carefully, as these Terms form a binding agreement between you and Illumina, Inc. (“Illumina”) regarding your useof the Products.
1.

License. Illumina grants you a non-exclusive, non-transferable license to access and use theProducts according to
the Terms.

2.

Description. The PGx Analysis – Microarray App is designed to analyze samples preparedusing microarray chip. The
app performs genotyping and CNV calling. It also optionally generates star allele and metabolizer reports based on user
selection and subscription.

3.

Restrictions. Unless you have received prior written authorization from Illumina, you must not:a.

copy, translate, modify, or make derivative works of the Products or any part thereof;b.

redistribute, sublicense, rent, publish, sell, assign, lease, market, transfer, or otherwisemake the Products available tothird parties;c.

reverse engineer, decompile or otherwise attempt to extract the source code of theProducts or any part thereof, unless
this is expressly permitted or required by applicablelaw; ord.

delete, obscure, or in any manner alter any warning or link that appears in theProducts.

4.

Behavior. You agree that you are responsible for your own conduct while using the Products,and for any consequences
thereof. You agree to use the Products only for purposes that areproper and in accordance with the Terms and any
applicable policies or guidelines Illumina maymake available. By way of example, and not as a limitation, you agree thatwhen using theProducts, you will not:a.

defame, abuse, harass, stalk, threaten or otherwise violate the legal rights, such asrights of privacy and publicity,of others;b.

upload, post, email, transmit or otherwise make available any inappropriate,defamatory, obscene, or unlawful content;c.

upload, post, transmit or otherwise make available any content that infringes any patent, trademark, copyright, trade
secret or other proprietary right of any party, unless you are the owner of the rights, or have the permission of theowner or other legal justification to use such content;d.

upload, post, email, transmit or otherwise make available messages that promote pyramid schemes, chain letters, ordisruptive commercial messages or advertisements;e.

upload, post, email, transmit or otherwise make available any other content, message, or communication prohibited byapplicable law, the Terms or any applicable Product policies or guidelines;f.

download any file posted by another that you know, or reasonably should know, cannot be legally distributed insuch manner;g.

impersonate another person or entity, or falsify or delete any author attributions or proprietary designations or labels of
the origin or source of Content, software or other material;h.

restrict or inhibit any other user from using the Products;i.

collect information about users for any unauthorized purpose;j.

submit content that falsely expresses or implies that such content is sponsored or endorsed by Illumina;k.

create user accounts by automated means or under false or fraudulent pretenses;l.

promote or provide instructional information about illegal activities;

m. promote physical harm or injury against any group or individual; orn.

transmit any viruses, worms, defects, Trojan horses, or any items of a destructive nature.
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5.

Content in the Products. The Products may allow you to access and view a variety of content, including but not limited
to genetic sequences, and other related information provided by Illumina, its licensors, and its users (the “Content”).
Additionally, you may choose to access other third-party content made available in the Products through Illumina
services. You understand and agree that certain Content is provided from third parties, and is subject to copyright andother intellectual property rights owned by or licensed to such third parties. You may be held liable for any unauthorizedcopying or disclosure of this Content.

6.

Export. The Products may be subject to United States export controls. By using the Products, you agree to use theProducts only for purposes that are legal, proper and in accordance with these Terms. Specifically, you agree to comply
with all applicable export and reexport control laws and regulations.

7.

DISCLAIMER OF WARRANTIES AND LIMITATIONS ON LIABILITY. THE PRODUCTS ARE PROVIDED AS-IS, WHERE-IS WITH
ALL FAULTS AND WITHOUT ANY WARRANTY OF ANY KIND, WHETHER EXPRESS OR IMPLIED, INCLUDING WITHOUT
LIMITATION ANY FITNESS FOR A PARTICULAR PURPOSE. ILLUMINA AND ITS LICENSORS MAKE NO REPRESENTATIONS
OR WARRANTIES REGARDING THE ACCURACY OR COMPLETENESS OF ANY CONTENT OR THE PRODUCTS. TO
THE FULLEST EXTENT ALLOWABLE BY APPLICABLE LAW, ILLUMINA AND ITS LICENSORS EXPRESSLY DISCLAIM
ALL WARRANTIES IN CONNECTION WITH THE CONTENT AND THE PRODUCTS, AND WILL NOT BE LIABLE FOR ANY
DAMAGE OR LOSS RESULTING FROM YOUR USE OF THE CONTENT OR THE PRODUCTS.

8.

LIMITATION OF LIABILITY. TO THE EXTENT PERMITTED UNDER APPLICABLE LAW, IN NO EVENT SHALL ILLUMINA BE
LIABLE UNDER ANY THEORY OF CONTRACT, TORT, STRICT LIABILITY, OR OTHER LEGAL OR EQUITABLE THEORY FORANY INDIRECT, CONSEQUENTIAL, OR INCIDENTAL DAMAGES ARISING OUT OF OR IN ANY RAY RELATED TO THESETERMS, EVEN IF ILLUMINA HAS BEEN ADVISED OF THE POSSIBILITY THEREOF INCLUDING, WITHOUT LIMITATION,
ANY LIABILITY FOR LOST PROFITS, LOST DATA, INTERRUPTION OF BUSINESS, OTHER ECONOMIC LOSS, OR ANY LOSSOF DATA. ILLUMINA’S AGGREGATE LIABILITY, IF ANY, ARISING OF OR IN ANY WAY RELATED TO THESE TERMS OR THE
SUBJECT MATTER HEREOF, IS LIMITED TO DIRECT DAMAGES NOT TO EXCEED $1,000 USD.

Components
The Products may make use of several open-source tools. This document provides a list of tools, followed by thelicenses under which these tools are distributed. All third-party software comes with a disclaimer of all warranties
and responsibilities.
List of tools:
Java is licensed under http://www.oracle.com/technetwork/java/javase/terms/license/index.html
Mono is licensed as follows
The C# compiler is dual-licensed under the MIT/X11 license and the GNU General Public License (GPL).
The tools are released under the terms of the GNU General Public License (GPL).
The runtime libraries are under the GNU Library GPL 2.0 (LGPL 2.0).
The class libraries are released under the terms of the MIT X11 license.
ASP.NET MVC, the Managed Extensibility Framework (MEF), the Dynamic Language Runtime (DLR), System.Data.Services.
Client, parts of System.Numerics and ASP.NET AJAX client software are released by Microsoft under the open source
Microsoft Permissive License, some of them are dual licensed also as Apache2
Ubuntu is distributed under GPL and various other free software licenses.
Docker is licensed under the Apache license 2.0
Bismark is distributed under GPL v3
mirBase is in the public domain
2mirDeep* is distributed under GPL v3
Bowtie is licensed under the Artistic License (2/7/12)
bwa is distributed under GPL v3
Boost is distributed under the Boost license
cmake is licensed under the BSD license
Cufflinks is licensed under the Boost License
Copyright (C) 2003-2009 Cole Trapnell et al

Boost Software License, Version 1.0

Permission is hereby granted, free of charge, to any person or organization obtaining a copy of the software andaccompanying documentation covered by this license (the “Software”) to use, reproduce, display, distribute, execute, andtransmit the Software, and to prepare derivative works of the Software, and to permit third-parties to whom the Software isfurnished to do so, all subject to the following:
The copyright notices in the Software and this entire statement, including the above license grant, this restriction andthe following disclaimer, must be included in all copies of the Software, in whole or in part, and all derivative works of the
Software, unless such copies or derivative works are solely in the form of machine-executable object code generated by asource language processor.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT
NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NONINFRINGEMENT. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
GATK is distributed under the MIT style license
getopt for GNU is distributed under LGPL v2
The pthreads-win32 library is distributed under the LGPL license
samtools is distributed under the MIT license
The MIT License
Copyright (c) 2008-2009 Genome Research Ltd.
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:

3

The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Picard is licensed under the MIT and the Apache 2.0 license
TopHat is licensed under the Artistic License
The zlib library is distributed under the Zlib license
Isaac is distributed under the Isaac open source license
Velvet is distributed under GPL v2
Cramtools is distributed under the MIT license.
Copyright (c) 2010 The Broad Institute
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE
Seneca CNV caller requries Perl, R, MClust, Python:
Perl is distributed under the terms of the Artistic License (http://dev.perl.org/licenses/)
Python is distributed under the Python Software Foundation license (see http://docs.python.org/2/license.html)
R is distributed under GPL-2 (see http://www.r-project.org/Licenses/)
mclust is distributed under GPL-2 (see http://www.stat.washington.edu/mclust/)
Star is distributed under GPL v3
DeSeq2 is distributed under GPL v3 http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html
FastqQC is distributed under GPL v3 http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
MACS is distributed under the artistic license. http://liulab.dfci.harvard.edu/MACS/COPYING
Meme-ChiP is distributed un the MIT license https://searchcode.com/codesearch/view/42770833/

4

Gem is distributed under the creative commons license http://cgs.csail.mit.edu/gem/
Jquery is distributed under the MIT license https://jquery.org/license/
PDFFileWriter is distributed under http://www.codeproject.com/info/cpol10.aspx
MatPlotLib is distributed under a BSD type license:
1.

This LICENSE AGREEMENT is between the Matplotlib Development Team (MDT), and the Individual or
Organization (Licensee) accessing and otherwise using matplotlib software in source or binary form and its
associated documentation.

2.

Subject to the terms and conditions of this License Agreement, MDT hereby grants Licensee a nonexclusive, royaltyfree, world-wide license to reproduce, analyze, test, perform and/or display publicly, prepare derivative works, distribute,and otherwise use matplotlib 1.3.1 alone or in any derivative version, provided, however, that MDTs License Agreement
and MDTs notice of copyright, i.e., Copyright (c) 2012-2013 Matplotlib Development Team; All Rights Reserved areretained in matplotlib 1.3.1 alone or in any derivative version prepared by Licensee.

3.

In the event Licensee prepares a derivative work that is based on or incorporates matplotlib 1.3.1 or any part thereof, andwants to make the derivative work available to others as provided herein, then Licensee hereby agrees to include in any
such work a brief summary of the changes made to matplotlib 1.3.1.

4.

MDT is making matplotlib 1.3.1 available to Licensee on an AS IS basis. MDT MAKES NO REPRESENTATIONS OR
WARRANTIES, EXPRESS OR IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, MDT MAKES NO AND DISCLAIMSANY REPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS FOR ANY PARTICULAR PURPOSE OR THATTHE USE OF MATPLOTLIB 1.3.1 WILL NOT INFRINGE ANY THIRD PARTY RIGHTS.

5.

MDT SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF MATPLOTLIB 1.3.1 FOR ANY INCIDENTAL, SPECIAL,
OR CONSEQUENTIAL DAMAGES OR LOSS AS A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING
MATPLOTLIB 1.3.1, OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.

6.

This License Agreement will automatically terminate upon a material breach of its terms and conditions.

7.

Nothing in this License Agreement shall be deemed to create any relationship of agency, partnership, or joint venture
between MDT and Licensee. This License Agreement does not grant permission to use MDT trademarks or trade name ina trademark sense to endorse or promote products or services of Licensee, or any third party.

8.

By copying, installing or otherwise using matplotlib 1.3.1, Licensee agrees to be bound by the terms and conditions of
this License Agreemen

NumPy http://docs.scipy.org/doc/numpy/license.html
Copyright (c) 2005, NumPy Developers
All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following
conditions are met:
Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer
in the documentation and/or other materials provided with the distribution.
Neither the name of the NumPy Developers nor the names of any contributors may be used to endorse or promote products
derived from this software without specific prior written permission.

5

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS AS IS AND ANY EXPRESS OR IMPLIEDWARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESSINTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
SciPy http://www.scipy.org/scipylib/license.html
Copyright 2001, 2002 Enthought, Inc.
All rights reserved.
Copyright 2003-2013 SciPy Developers.
All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following
conditions are met:
Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer
in the documentation and/or other materials provided with the distribution.
Neither the name of Enthought nor the names of the SciPy Developers may be used to endorse or promote products derived
from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS AS IS AND ANY EXPRESS OR IMPLIEDWARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR CONTRIBUTORS BE LIABLE FOR
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESSINTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
ImageMagik is distributed under a license compatible with GPL V3
Circos is distributed under GPL v2 https://code.google.com/p/circos/
Curl is distributed under the MIT/X license http://curl.haxx.se/docs/copyright.html
COPYRIGHT AND PERMISSION NOTICE
Copyright (c) 1996 - 2014, Daniel Stenberg, <daniel@haxx.se>.
All rights reserved.

6Permission to use, copy, modify, and distribute this software for any purpose with or without fee is hereby granted, provided
that the above copyright notice and this permission notice appear in all copies.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT
OF THIRD PARTY RIGHTS. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM,DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF
OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Except as contained in this notice, the name of a copyright holder shall not be used in advertising or otherwise to promote
the sale, use or other dealings in this Software without prior written authorization of the copyright holder.
Bgzip is distributed under GPL V2 http://sourceforge.net/projects/bgzip/
DeJaVu Fonts are in the public domain http://dejavu-fonts.org/wiki/License
Cytoscape is distributed under LGPL http://www.cytoscape.org/download.html
DataTable java script is distributed under MIT http://www.datatables.net/
Copyright (C) 2008-2014, SpryMedia Ltd.
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:
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THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
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IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
VEP is distributed under a modified Apache license. http://uswest.ensembl.org/info/docs/tools/vep/script/vep_download.html
VCFTools is distributed under the LGPL V3 http://vcftools.sourceforge.net/license.html
Khmer? http://darcs.idyll.org/~t/projects/khmer/doc/README.txt
Bedtools is distributed under GPL V2 https://code.google.com/p/bedtools/
bootstrap.css is distributed under MIT http://getbootstrap.com/getting-started/#license-faqs
The MIT License (MIT)Copyright (c) 2011-2014 Twitter, Inc
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
d3.js is distributed under BSD http://d3js.org/
Copyright (c) 2010-2014, Michael Bostock
All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following
conditions are met:
• Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
• Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following
disclaimer in the documentation and/or other materials provided with the distribution.
• The name Michael Bostock may not be used to endorse or promote products derived from this software without specificprior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” AND ANY EXPRESS OR IMPLIEDWARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESSFOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL MICHAEL BOSTOCK BE LIABLE FOR ANY DIRECT,INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDINGNEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
jhashtable-3.0.js is distributed under apache https://code.google.com/p/jshashtable/
underscore.js is distributed under the MIT license http://underscorejs.org/docs/underscore.html
NDesk.Options is distributed under MIT http://www.ndesk.org/Options
Copyright (C) 2008 Novell (http://www.novell.com)
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
Newtonsoft.Json is distributed under the MIT license https://raw.githubusercontent.com/JamesNK/Newtonsoft.Json/master/
LICENSE.md
The MIT License (MIT)Copyright (c) 2007 James Newton-King
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Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
ServiceStack (v3.x) is BSD https://github.com/ServiceStackV3/ServiceStackV3/blob/master/README.md
Copyright (c) 2007-2013, Demis Bellot, ServiceStack.
http://www.servicestack.net
All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following
conditions are met:
• Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
• Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following
disclaimer in the documentation and/or other materials provided with the distribution.
• Neither the name of the ServiceStack nor the names of its contributors may be used to endorse or promote products
derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” AND ANY EXPRESS OR IMPLIEDWARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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POSSIBILITY OF SUCH DAMAGE.
ICSharpCode.SharpZipLib is distributed under GPL http://icsharpcode.github.io/SharpZipLib/
Below are the software licenses:

Microsoft Permissive LicenseThis license governs use of the accompanying software. If you use the software, you accept this license. If you do not accept
the license, do not use the software.
1.

Definitions
The terms “reproduce,” “reproduction,” “derivative works,” and “distribution” have the same meaning here as under U.S.
copyright law.
A “contribution” is the original software, or any additions or changes to the software.
A “contributor” is any person that distributes its contribution under this license.
“Licensed patents” are a contributor’s patent claims that read directly on its contribution.
92.

Grant of Rightsa.

Copyright Grant- Subject to the terms of this license, including the license conditions and limitations in section 3, eachcontributor grants you a non-exclusive, worldwide, royalty-free copyright license to reproduce its contribution, prepare
derivative works of its contribution, and distribute its contribution or any derivative works that you create.

b.

Patent Grant- Subject to the terms of this license, including the license conditions and limitations in section 3, eachcontributor grants you a non-exclusive, worldwide, royalty-free license under its licensed patents to make, have made,use, sell, offer for sale, import, and/or otherwise dispose of its contribution in the software or derivative works of thecontribution in the software.

3.

Conditions and Limitationsa.

No Trademark License- This license does not grant you rights to use any contributors’ name, logo, or trademarks.

b.

If you bring a patent claim against any contributor over patents that you claim are infringed by the software, your patent
license from such contributor to the software ends automatically.

c.

If you distribute any portion of the software, you must retain all copyright, patent, trademark, and attribution notices
that are present in the software.

d.

If you distribute any portion of the software in source code form, you may do so only under this license by including acomplete copy of this license with your distribution. If you distribute any portion of the software in compiled or object
code form, you may only do so under a license that complies with this license.

e.

The software is licensed “as-is.” You bear the risk of using it. The contributors give no express warranties, guarantees
or conditions. You may have additional consumer rights under your local laws which this license cannot change. To theextent permitted under your local laws, the contributors exclude the implied warranties of merchantability, fitness for aparticular purpose and non-infringement.

Apache License
Version 2.0, January 2004
http://www.apache.org/licenses/
TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
1.

Definitions.
“License” shall mean the terms and conditions for use, reproduction, and distribution as defined by Sections 1 through 9of this document.
“Licensor” shall mean the copyright owner or entity authorized by the copyright owner that is granting the License.
“Legal Entity” shall mean the union of the acting entity and all other entities that control, are controlled by, or are undercommon control with that entity. For the purposes of this definition, “control” means (i) the power, direct or indirect, tocause the direction or management of such entity, whether by contract or otherwise, or (ii) ownership of fifty percent(50%) or more of the outstanding shares, or (iii) beneficial ownership of such entity.
“You” (or “Your”) shall mean an individual or Legal Entity exercising permissions granted by this License.
“Source” form shall mean the preferred form for making modifications, including but not limited to software source code,
documentation source, and configuration files.
“Object” form shall mean any form resulting from mechanical transformation or translation of a Source form, including
but not limited to compiled object code, generated documentation, and conversions to other media types.
“Work” shall mean the work of authorship, whether in Source or Object form, made available under the License,
as indicated by a copyright notice that is included in or attached to the work (an example is provided in the
Appendix below).

10	“Derivative Works” shall mean any work, whether in Source or Object form, that is based on (or derived from) the Workand for which the editorial revisions, annotations, elaborations, or other modifications represent, as a whole, an original
work of authorship. For the purposes of this License, Derivative Works shall not include works that remain separable from,or merely link (or bind by name) to the interfaces of, the Work and Derivative Works thereof.
	“Contribution” shall mean any work of authorship, including the original version of the Work and any modifications oradditions to that Work or Derivative Works thereof, that is intentionally submitted to Licensor for inclusion in the Workby the copyright owner or by an individual or Legal Entity authorized to submit on behalf of the copyright owner. For
the purposes of this definition, “submitted” means any form of electronic, verbal, or written communication sent to the
Licensor or its representatives, including but not limited to communication on electronic mailing lists, source code control
systems, and issue tracking systems that are managed by, or on behalf of, the Licensor for the purpose of discussing andimproving the Work, but excluding communication that is conspicuously marked or otherwise designated in writing by the
copyright owner as “Not a Contribution.”	“Contributor” shall mean Licensor and any individual or Legal Entity on behalf of whom a Contribution has been received
by Licensor and subsequently incorporated within the Work.
2.

Grant of Copyright License. Subject to the terms and conditions of this License, each Contributor hereby grants to You
a perpetual, worldwide, non-exclusive, no-charge, royalty-free, irrevocable copyright license to reproduce, prepare
Derivative Works of, publicly display, publicly perform, sublicense, and distribute the Work and such Derivative Works in
Source or Object form.

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Grant of Patent License. Subject to the terms and conditions of this License, each Contributor hereby grants to You aperpetual, worldwide, non-exclusive, no-charge, royalty-free, irrevocable (except as stated in this section) patent license
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mirBase License: ftp://mirbase.org/pub/mirbase/CURRENT/LICENSE
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14

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” AND ANY EXPRESS OR IMPLIEDWARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
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TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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Zlib License: http://zlib.net/zlib_license.html/* zlib.h -- interface of the ‘zlib’ general purpose compression library version 1.2.6, January 29th, 2012
Copyright (C) 1995-2012 Jean-loup Gailly and Mark Adler
This software is provided ‘as-is’, without any express or implied warranty. In no event will the authors be held liable for any
damages arising from the use of this software.
Permission is granted to anyone to use this software for any purpose, including commercial applications, and to alter it andredistribute it freely, subject to the following restrictions:1.

The origin of this software must not be misrepresented; you must not claim that you wrote the original software. If
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not required.

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Altered source versions must be plainly marked as such, and must not be misrepresented as being the original software.

3.

This notice may not be removed or altered from any source distribution.

Jean-loup Gailly
Mark Adler

Boost License: http://www.boost.org/users/license.html
Boost Software License - Version 1.0 - August 17th, 2003
Permission is hereby granted, free of charge, to any person or organization obtaining a copy of the software andaccompanying documentation covered by this license (the “Software”) to use, reproduce, display, distribute, execute, andtransmit the Software, and to prepare derivative works of the Software, and to permit third-parties to whom the Software isfurnished to do so, all subject to the following:
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15

Java license http://www.oracle.com/technetwork/java/javase/downloads/jre-6u31-download-1501637.html
Oracle Binary Code License Agreement for the Java SE Platform Products and JavaFX
ORACLE AMERICA, INC. (“ORACLE”), FOR AND ON BEHALF OF ITSELF AND ITS SUBSIDIARIES AND AFFILIATES UNDERCOMMON CONTROL, IS WILLING TO LICENSE THE SOFTWARE TO YOU ONLY UPON THE CONDITION THAT YOU ACCEPTALL OF THE TERMS CONTAINED IN THIS BINARY CODE LICENSE AGREEMENT AND SUPPLEMENTAL LICENSE TERMS(COLLECTIVELY “AGREEMENT”). PLEASE READ THE AGREEMENT CAREFULLY. BY SELECTING THE “ACCEPT LICENSE
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16

6.

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 OMMERCIAL FEATURES. You may not use the Commercial Features for running Programs, Java applets or applications inyour internal business operations or for any commercial or production purpose, or for any purpose other than as set forthin Sections B, C, D and E of these Supplemental Terms. If You want to use the Commercial Features for any purpose otherthan as permitted in this Agreement, You must obtain a separate license from Oracle.
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and restrictions and exceptions set forth in the README File incorporated herein by reference, including, but not limited
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17

distribute the Software subject to a license agreement that: (a) is a complete, unmodified reproduction of this Agreement;or (b) protects Oracle’s interests consistent with the terms contained in this Agreement and that includes the notice set
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 AVA TECHNOLOGY RESTRICTIONS. You may not create, modify, or change the behavior of, or authorize your licensees
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18

H. COMMERCIAL FEATURES NOTICE. For purpose of complying with Supplemental Term Section C.(v)(b) and D.(v)(b),your license agreement shall include the following notice, where the notice is displayed in a manner that anyone using
the Software will see the notice: Use of the Commercial Features for any commercial or production purpose requires aseparate license from Oracle. Commercial Features means those features identified Table 1-1 (Commercial Features In
Java SE Product Editions) of the Java SE documentation accessible at http://www.oracle.com/technetwork/java/javase/
documentation/index.html
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provided for in this Agreement.
J. T
 HIRD PARTY CODE. Additional copyright notices and license terms applicable to portions of the Software are set forthin the THIRDPARTYLICENSEREADME file accessible at http://www.oracle.com/technetwork/java/javase/documentation/index.html. In addition to any terms and conditions of any third party opensource/freeware license identified in the
THIRDPARTYLICENSEREADME file, the disclaimer of warranty and limitation of liability provisions in paragraphs 4 and 5 of
the Binary Code License Agreement shall apply to all Software in this distribution.
K. TERMINATION FOR INFRINGEMENT. Either party may terminate this Agreement immediately should any Software become,or in either party’s opinion be likely to become, the subject of a claim of infringement of any intellectual property right.
L. INSTALLATION AND AUTO-UPDATE. The Software’s installation and auto-update processes transmit a limited amountof data to Oracle (or its service provider) about those specific processes to help Oracle understand and optimize them.
Oracle does not associate the data with personally identifiable information. You can find more information about the data
Oracle collects as a result of your Software download at http://www.oracle.com/technetwork/java/javase/documentation/index.html.
For inquiries please contact: Oracle America, Inc., 500 Oracle Parkway, Redwood Shores, California 94065, USA.

ILLUMINA iSAAC OPEN SOURCE LICENSE
Contributor means someone who Modified the Software.
Commercial Entity means for-profit entities. Academic universities and other bona fide non-profit entities are not
Commercial Entities.
Commercial Useand grammatical variations (e.g., Commercial and Commercialize) means any use that is undertaken for the
purpose of profit or other commercial gain, except use or sale of the Software as part of a SaaS Bundle,which is prohibited;
see below. Sale of Software or products that include Software, use of Software in the provision of sequencing and otherdata-generating services (except not as a SaaS Bundle), and software support services are three examples (non-limiting) of
Commercial Use.
Modifications means any changes made to the Software, including combinations with other software; Modify means tomake Modifications.
Redistribution means giving (by any means, including selling) the Software to anyone else, whether inside or outside ofyour organization.
SaaS Bundle means a bundle of software that are used, offered, provided or sold as a local or hosted solution provided for afee or other compensation, including (without limitation) providing software at no cost in connection with, or to induce, a saleof computing equipment. SaaS means software as a service.
Software means the iSAAC software, with or without Modifications.

19

1.

Redistribution and Use of Software. Subject to the terms and conditions of this License, you are permitted to
Redistribute and use the Software in source and binary forms, with or without Modification, provided that the following
conditions are met:a.

Redistributions of Software source code must retain the above copyright notice, this list of conditions (a-e) and thedisclaimer that follows;b.

Redistributions of Software in source or in binary form must include a copy of this License in the read-me file,
documentation and other materials provided with the Distribution;c.

The name of Illumina, Inc. or the names of any Contributors must not be used to endorse or promote products derived
from this Software without specific prior written permission from Illumina or the Contributor(s);d.

Commercial Use of the Software (including sale of the Software, use to provide sequencing services, or use in a service
to provide Software support) in connection with non-Illumina-branded equipment requires the specific prior written
permission of Illumina (see Paragraph 4b); ande.

This License gives you the right to (i) use the Software for all non-Commercial Uses to process data generated on any
brand of equipment, (ii) use the Software for Commercial Use in connection with Illumina-branded equipment (e.g.,sell Software for use on Illumina equipment, use Software to process data generated on Illumina-branded equipment,
provide support for Software designed to run on Illumina equipment), and (iii) only after receiving specific prior written
permission from Illumina (see Paragraph 4b), use the Software for Commercial Use in connection with non-Illuminabranded equipment in accordance with Illuminas written permission.

2.

Modifications to Software. Subject to the terms and conditions of this License, you are permitted to Modify the Software
source code provided that the following conditions are met:a.

You make the Modifications (source) publicly available (e.g., posting at a designated website);b.

You ensure and hereby agree that the modified Software is subject to the terms and conditions of this License;c.

You do not make any Modifications that could require that this Software be licensed under terms other than those inthis License (e.g., do not subject this Software to terms of a GPL license); andd.

For Commercial Entities only, you inform Illumina (address below) of the Modifications you make, in addition to making
the Modifications publicly available.

3.

Software Support. It is Illuminas intent and desire that the Software be continuously developed through a robust andcollaborative community effort. We chose the terms and conditions in this License to encourage such innovation, andpurposely avoided burdensome legal obstacles that can stall a community development project. It is our hope that thedevelopment community will be a rich resource of answers, fixes, and other technical assistance in open user forums
and other venues that will provide technical support to users of Modified Software. Accordingly, Illumina does notprovide technical support or warranty (see paragraph 5 below) for Modified versions of the Software. Illumina will,
however, continue to offer our usual technical support for the identified version of iSAAC posted at the download sectionof the Illumina website www.illumina.com.

4.

Commercialization. Subject to the terms and conditions of this License:a.

If you are interested in moving beyond development and would like to Commercialize the Software for use inconnection with Illumina-branded equipment (such as selling the Software, including the Software in Commercial
products, or providing services to support the Software), then this License gives you the right to do so pursuant toParagraph 1(e)(ii).

b.

If you would like to Commercialize the Software, including sell the Software, using it in services, or provide a service
to support the Software, all in connection with non-Illumina branded equipment, then you are required to request andreceive Illuminas permission before doing so. If this is the case, then contact Illumina before you begin any Commercial
activity and let us know what you have in mind. Unless your Commercial plans are contrary to our interests, it is likelythat we will grant you permission to develop or use the Software for the Commercial purpose you have in mind.

c.

This License does not give you any right to use or sell the Software (original or Modified; for a fee, other consideration,or for no fee in connection with sale of computing equipment) as a part of a SaaS Bundle and you agree that you will
not use or sell the Software as part of a SaaS Bundle, regardless of whether the sequencing platform is Illuminabranded or non-Illumina branded.

5.

Disclaimer. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” AND WITHOUTANY TECHNICAL SUPPORT (EXCEPT AS MAY BE EXPRESSLY STATED IN THIS LICENSE), UPDATES, OR FIXES. ANY
AND ALL EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
MERCHANTABILITY, INFRINGEMENT, AND FITNESS FOR A PARTICULAR PURPOSE ARE EXPRESSLY DISCLAIMED. IN
NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OFSUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDINGNEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
20

6.

Third Party Software. Any third party software that you use with the Software covered under this License, is subject toterms and conditions of the applicable third party software license. You should not use such third party Software unless
you agree to the terms of any applicable third party software license.

7.

Rights. You are granted rights under this License to use (for Commercial Uses and non-Commercial Uses only as stated),
Redistribute and Modify the Software as expressly stated in this License in exchange for your agreement to abide by
the terms and conditions of this License. If you do not or cannot agree to the terms and conditions of this License, thenyou do not have any rights that would otherwise be granted under this License, including no right to use, Redistribute or
Modify the Software.

Python license (applies to 2.2 and above - see http://docs.python.org/2/license.html):
PSF LICENSE AGREEMENT FOR PYTHON 2.7.6
This LICENSE AGREEMENT is between the Python Software Foundation (PSF), and the Individual or Organization (Licensee)
accessing and otherwise using Python 2.7.6 software in source or binary form and its associated documentation.
Subject to the terms and conditions of this License Agreement, PSF hereby grants Licensee a nonexclusive, royalty-free,world-wide license to reproduce, analyze, test, perform and/or display publicly, prepare derivative works, distribute, andotherwise use Python 2.7.6 alone or in any derivative version, provided, however, that PSFs License Agreement and PSFs
notice of copyright, i.e., Copyright 2001-2014 Python Software Foundation; All Rights Reserved are retained in Python 2.7.6
alone or in any derivative version prepared by Licensee.
In the event Licensee prepares a derivative work that is based on or incorporates Python 2.7.6 or any part thereof, and wants
to make the derivative work available to others as provided herein, then Licensee hereby agrees to include in any such worka brief summary of the changes made to Python 2.7.6.
PSF is making Python 2.7.6 available to Licensee on an AS IS basis. PSF MAKES NO REPRESENTATIONS OR
WARRANTIES, EXPRESS OR IMPLIED. BY WAY OF EXAMPLE, BUT NOT LIMITATION, PSF MAKES NO AND DISCLAIMS ANYREPRESENTATION OR WARRANTY OF MERCHANTABILITY OR FITNESS FOR ANY PARTICULAR PURPOSE OR THAT THE USE
OF PYTHON 2.7.6 WILL NOT INFRINGE ANY THIRD PARTY RIGHTS.
PSF SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF PYTHON 2.7.6 FOR ANY INCIDENTAL, SPECIAL, OR
CONSEQUENTIAL DAMAGES OR LOSS AS A RESULT OF MODIFYING, DISTRIBUTING, OR OTHERWISE USING PYTHON 2.7.6,
OR ANY DERIVATIVE THEREOF, EVEN IF ADVISED OF THE POSSIBILITY THEREOF.
This License Agreement will automatically terminate upon a material breach of its terms and conditions.
Nothing in this License Agreement shall be deemed to create any relationship of agency, partnership, or joint venture
between PSF and Licensee. This License Agreement does not grant permission to use PSF trademarks or trade name in a
trademark sense to endorse or promote products or services of Licensee, or any third party.
By copying, installing or otherwise using Python 2.7.6, Licensee agrees to be bound by the terms and conditions of thisLicense Agreement.

21

GPL v2:
GNU GENERAL PUBLIC LICENSE
Version 2, June 1991
Copyright (C) 1989, 1991 Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed.
Preamble
The licenses for most software are designed to take away your freedom to share and change it. By contrast, the GNU
General Public License is intended to guarantee your freedom to share and change free software--to make sure the softwareis free for all its users. This General Public License applies to most of the Free Software Foundation’s software and to any
other program whose authors commit to using it. (Some other Free Software Foundation software is covered by the GNU
Lesser General Public License instead.) You can apply it to your programs, too.
When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to makesure that you have the freedom to distribute copies of free software (and charge for this service if you wish), that you receive
source code or can get it if you want it, that you can change the software or use pieces of it in new free programs; and thatyou know you can do these things. To protect your rights, we need to make restrictions that forbid anyone to deny you theserights or to ask you to surrender the rights. These restrictions translate to certain responsibilities for you if you distributecopies of the software, or if you modify it.
For example, if you distribute copies of such a program, whether gratis or for a fee, you must give the recipients all the rightsthat you have. You must make sure that they, too, receive or can get the source code. And you must show them these terms
so they know their rights.
We protect your rights with two steps: (1) copyright the software, and (2) offer you this license which gives you legal
permission to copy, distribute and/or modify the software.
Also, for each author’s protection and ours, we want to make certain that everyone understands that there is no warranty forthis free software. If the software is modified by someone else and passed on, we want its recipients to know that what they
have is not the original, so that any problems introduced by others will not reflect on the original authors’ reputations.
Finally, any free program is threatened constantly by software patents. We wish to avoid the danger that redistributors of afree program will individually obtain patent licenses, in effect making the program proprietary. To prevent this, we have madeit clear that any patent must be licensed for everyone’s free use or not licensed at all.
The precise terms and conditions for copying, distribution and modification follow.
GNU GENERAL PUBLIC LICENSETERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATIONThis License applies to any program or other work which contains a notice placed by the copyright holder saying it may be
distributed under the terms of this General Public License. The “Program”, below, refers to any such program or work, anda “work based on the Program” means either the Program or any derivative work under copyright law: that is to say, a work
containing the Program or a portion of it, either verbatim or with modifications and/or translated into another language.
(Hereinafter, translation is included without limitation in the term “modification”.) Each licensee is addressed as “you”.
Activities other than copying, distribution and modification are not covered by this License; they are outside its scope. The
act of running the Program is not restricted, and the output from the Program is covered only if its contents constitute a work
based on the Program (independent of having been made by running the Program).
22

Whether that is true depends on what the Program does.
1.

You may copy and distribute verbatim copies of the Program’s source code as you receive it, in any medium, provided
that you conspicuously and appropriately publish on each copy an appropriate copyright notice and disclaimer ofwarranty; keep intact all the notices that refer to this License and to the absence of any warranty; and give any otherrecipients of the Program a copy of this License along with the Program.
You may charge a fee for the physical act of transferring a copy, and you may at your option offer warranty protection in
exchange for a fee.

2.

You may modify your copy or copies of the Program or any portion of it, thus forming a work based on the Program, andcopy and distribute such modifications or work under the terms of Section 1 above, provided that you also meet all ofthese conditions:a.

You must cause the modified files to carry prominent notices stating that you changed the files and the date ofany change.

b.

You must cause any work that you distribute or publish, that in whole or in part contains or is derived from the Programor any part thereof, to be licensed as a whole at no charge to all third parties under the terms of this License.

c.

If the modified program normally reads commands interactively when run, you must cause it, when started runningfor such interactive use in the most ordinary way, to print or display an announcement including an appropriate
copyright notice and a notice that there is no warranty (or else, saying that you provide a warranty) and that users may
redistribute the program under these conditions, and telling the user how to view a copy of this License. (Exception: if
the Program itself is interactive but does not normally print such an announcement, your work based on the Program is
not required to print an announcement.)
These requirements apply to the modified work as a whole. If identifiable sections of that work are not derived from theProgram, and can be reasonably considered independent and separate works in themselves, then this License, and its
terms, do not apply to those sections when you distribute them as separate works. But when you distribute the same
sections as part of a whole which is a work based on the Program, the distribution of the whole must be on the termsof this License, whose permissions for other licensees extend to the entire whole, and thus to each and every part
regardless of who wrote it. Thus, it is not the intent of this section to claim rights or contest your rights to work written
entirely by you; rather, the intent is to exercise the right to control the distribution of derivative or collective works
based on the Program.
In addition, mere aggregation of another work not based on the Program with the Program (or with a work basedon the Program) on a volume of a storage or distribution medium does not bring the other work under the scope of
this License.

3.

You may copy and distribute the Program (or a work based on it, under Section 2) in object code or executable form
under the terms of Sections 1 and 2 above provided that you also do one of the following:a.

Accompany it with the complete corresponding machine-readable source code, which must be distributed under theterms of Sections 1 and 2 above on a medium customarily used for software interchange; or,b.

Accompany it with a written offer, valid for at least three years, to give any third party, for a charge no more thanyour cost of physically performing source distribution, a complete machine-readable copy of the corresponding
source code, to be distributed under the terms of Sections 1 and 2 above on a medium customarily used for softwareinterchange; or,c.

Accompany it with the information you received as to the offer to distribute corresponding source code. (Thisalternative is allowed only for noncommercial distribution and only if you received the program in object code or
executable form with such an offer, in accord with Subsection b above.)
The source code for a work means the preferred form of the work for making modifications to it. For an executablework, complete source code means all the source code for all modules it contains, plus any associated interface
definition files, plus the scripts used to control compilation and installation of the executable. However, as a special
exception, the source code distributed need not include anything that is normally distributed (in either source or binaryform) with the major components (compiler, kernel, and so on) of the operating system on which the executable runs,
unless that component itself accompanies the executable.
If distribution of executable or object code is made by offering access to copy from a designated place, then offering
equivalent access to copy the source code from the same place counts as distribution of the source code, even thoughthird parties are not compelled to copy the source along with the object code.

4.

You may not copy, modify, sublicense, or distribute the Program except as expressly provided under this License. Any
attempt otherwise to copy, modify, sublicense or distribute the Program is void, and will automatically terminate yourrights under this License.
23However, parties who have received copies, or rights, from you under this License will not have their licenses terminatedso long as such parties remain in full compliance.
5.

You are not required to accept this License, since you have not signed it. However, nothing else grants you permission
to modify or distribute the Program or its derivative works. These actions are prohibited by law if you do not accept thisLicense. Therefore, by modifying or distributing the Program (or any work based on the Program), you indicate youracceptance of this License to do so, and all its terms and conditions for copying, distributing or modifying the Program
or works based on it.

6.

Each time you redistribute the Program (or any work based on the Program), the recipient automatically receives alicense from the original licensor to copy, distribute or modify the Program subject to these terms and conditions. You
may not impose any further restrictions on the recipients’ exercise of the rights granted herein. You are not responsible
for enforcing compliance by third parties to this License.

7.

If, as a consequence of a court judgment or allegation of patent infringement or for any other reason (not limited topatent issues), conditions are imposed on you (whether by court order, agreement or otherwise) that contradict theconditions of this License, they do not excuse you from the conditions of this License. If you cannot distribute so as tosatisfy simultaneously your obligations under this License and any other pertinent obligations, then as a consequence
you may not distribute the Program at all. For example, if a patent license would not permit royalty-free redistribution of
the Program by all those who receive copies directly or indirectly through you, then the only way you could satisfy bothit and this License would be to refrain entirely from distribution of the Program.
If any portion of this section is held invalid or unenforceable under any particular circumstance, the balance of thesection is intended to apply and the section as a whole is intended to apply in other circumstances.
It is not the purpose of this section to induce you to infringe any patents or other property right claims or to contest
validity of any such claims; this section has the sole purpose of protecting the integrity of the free software distribution
system, which is implemented by public license practices. Many people have made generous contributions to the wide
range of software distributed through that system in reliance on consistent application of that system; it is up to theauthor/donor to decide if he or she is willing to distribute software through any other system and a licensee cannot
impose that choice. This section is intended to make thoroughly clear what is believed to be a consequence of the restof this License.

8.

If the distribution and/or use of the Program is restricted in certain countries either by patents or by copyrighted
interfaces, the original copyright holder who places the Program under this License may add an explicit geographicaldistribution limitation excluding those countries, so that distribution is permitted only in or among countries not thus
excluded. In such case, this License incorporates the limitation as if written in the body of this License.

9.

The Free Software Foundation may publish revised and/or new versions of the General Public License from time totime. Such new versions will be similar in spirit to the present version, but may differ in detail to address new problems
or concerns. Each version is given a distinguishing version number. If the Program specifies a version number of thisLicense which applies to it and “any later version”, you have the option of following the terms and conditions either ofthat version or of any later version published by the Free Software Foundation. If the Program does not specify a version
number of this License, you may choose any version ever published by the Free Software Foundation.

10. If you wish to incorporate parts of the Program into other free programs whose distribution conditions are different, write
to the author to ask for permission. For software which is copyrighted by the Free Software Foundation, write to the Free
Software Foundation; we sometimes make exceptions for this. Our decision will be guided by the two goals of preserving
the free status of all derivatives of our free software and of promoting the sharing and reuse of software generally.
NO WARRANTY
11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY FOR THE PROGRAM, TO THE
EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS
AND/OR OTHER PARTIES PROVIDE THE PROGRAM “AS IS” WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSEDOR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH
YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR
OR CORRECTION.
12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY COPYRIGHT HOLDER,
OR ANY OTHER PARTY WHO MAY MODIFY AND/OR REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE
TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISINGOUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATABEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM
TO OPERATE WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE
POSSIBILITY OF SUCH DAMAGES.
13. END OF TERMS AND CONDITIONS

24

How to Apply These Terms to Your New Programs
If you develop a new program, and you want it to be of the greatest possible use to the public, the best way to achieve this is
to make it free software which everyone can redistribute and change under these terms.
To do so, attach the following notices to the program. It is safest to attach them to the start of each source file to mosteffectively convey the exclusion of warranty; and each file should have at least the “copyright” line and a pointer to where
the full notice is found.
<one line to give the program’s name and a brief idea of what it does.>
Copyright (C) <year> <name of author>
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as
published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied
warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License formore details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free
Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
Also add information on how to contact you by electronic and paper mail.
If the program is interactive, make it output a short notice like this when it starts in an interactive mode:
Gnomovision version 69, Copyright (C) year name of author
Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w’.
This is free software, and you are welcome to redistribute it under certain conditions; type `show c’ for details.
The hypothetical commands `show w’ and `show c’ should show the appropriate parts of the General Public License. Of
course, the commands you use may be called something other than `show w’ and `show c’; they could even be mouse-clicks
or menu items--whatever suits your program.
You should also get your employer (if you work as a programmer) or your school, if any, to sign a “copyright disclaimer” forthe program, if necessary. Here is a sample; alter the names:
Yoyodyne, Inc., hereby disclaims all copyright interest in the program `Gnomovision’ (which makes passes at compilers)
written by James Hacker.
<signature of Ty Coon>, 1 April 1989
Ty Coon, President of Vice
This General Public License does not permit incorporating your program into proprietary programs. If your program is asubroutine library, you may consider it more useful to permit linking proprietary applications with the library. If this is what
you want to do, use the GNU Lesser General Public License instead of this License.

25

GPL v3:
GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed.
Preamble
The GNU General Public License is a free, copyleft license for software and other kinds of works.
The licenses for most software and other practical works are designed to take away your freedom to share and change theworks. By contrast, the GNU General Public License is intended to guarantee your freedom to share and change all versionsof a program--to make sure it remains free software for all its users. We, the Free Software Foundation, use the GNU General
Public License for most of our software; it applies also to any other work released this way by its authors. You can apply it toyour programs, too.
When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to makesure that you have the freedom to distribute copies of free software (and charge for them if you wish), that you receive
source code or can get it if you want it, that you can change the software or use pieces of it in new free programs, and thatyou know you can do these things.
To protect your rights, we need to prevent others from denying you these rights or asking you to surrender the rights.
Therefore, you have certain responsibilities if you distribute copies of the software, or if you modify it: responsibilities torespect the freedom of others.
For example, if you distribute copies of such a program, whether gratis or for a fee, you must pass on to the recipients thesame freedoms that you received. You must make sure that they, too, receive or can get the source code. And you mustshow them these terms so they know their rights.
Developers that use the GNU GPL protect your rights with two steps:(1) assert copyright on the software, and (2) offer you this License giving you legal permission to copy, distribute and/or
modify it.
For the developers’ and authors’ protection, the GPL clearly explains that there is no warranty for this free software. For bothusers’ and authors’ sake, the GPL requires that modified versions be marked as changed, so that their problems will not be
attributed erroneously to authors of previous versions.
Some devices are designed to deny users access to install or run modified versions of the software inside them, although
the manufacturer can do so. This is fundamentally incompatible with the aim of protecting users’ freedom to change thesoftware. The systematic pattern of such abuse occurs in the area of products for individuals to use, which is precisely
where it is most unacceptable. Therefore, we have designed this version of the GPL to prohibit the practice for those
products. If such problems arise substantially in other domains, we stand ready to extend this provision to those domains infuture versions of the GPL, as needed to protect the freedom of users.
Finally, every program is threatened constantly by software patents.
States should not allow patents to restrict development and use of software on general-purpose computers, but in thosethat do, we wish to avoid the special danger that patents applied to a free program could make it effectively proprietary. To
prevent this, the GPL assures that patents cannot be used to render the program non-free. The precise terms and conditions
for copying, distribution and modification follow.
26

TERMS AND CONDITIONSDefinitions.
“This License” refers to version 3 of the GNU General Public License.
“Copyright” also means copyright-like laws that apply to other kinds of works, such as semiconductor masks.
“The Program” refers to any copyrightable work licensed under this License. Each licensee is addressed as “you”.
“Licensees” and “recipients” may be individuals or organizations.
To “modify” a work means to copy from or adapt all or part of the work in a fashion requiring copyright permission, other thanthe making of an exact copy. The resulting work is called a “modified version” of the earlier work or a work “based on” theearlier work.
A “covered work” means either the unmodified Program or a work based on the Program.
To “propagate” a work means to do anything with it that, without permission, would make you directly or secondarily liable
for infringement under applicable copyright law, except executing it on a computer or modifying a private copy. Propagation
includes copying, distribution (with or without modification), making available to the public, and in some countries otheractivities as well.
To “convey” a work means any kind of propagation that enables other parties to make or receive copies. Mere interaction
with a user through a computer network, with no transfer of a copy, is not conveying.
An interactive user interface displays “Appropriate Legal Notices” to the extent that it includes a convenient and prominently
visible feature that (1) displays an appropriate copyright notice, and (2) tells the user that there is no warranty for the work
(except to the extent that warranties are provided), that licensees may convey the work under this License, and how to viewa copy of this License. If the interface presents a list of user commands or options, such as a menu, a prominent item in thelist meets this criterion.
1. Source Code.
The “source code” for a work means the preferred form of the work for making modifications to it. “Object code” means any
non-source form of a work.
A “Standard Interface” means an interface that either is an official standard defined by a recognized standards body, or, inthe case of interfaces specified for a particular programming language, one that is widely used among developers working inthat language.
The “System Libraries” of an executable work include anything, other than the work as a whole, that (a) is included in thenormal form of packaging a Major Component, but which is not part of that Major Component, and (b) serves only to enable
use of the work with that Major Component, or to implement a Standard Interface for which an implementation is available tothe public in source code form.
A “Major Component”, in this context, means a major essential component (kernel, window system, and so on) of the specificoperating system (if any) on which the executable work runs, or a compiler used to produce the work, or an object code
interpreter used to run it.
The “Corresponding Source” for a work in object code form means all the source code needed to generate, install, and (foran executable work) run the object code and to modify the work, including scripts to control those activities. However, it
does not include the work’s System Libraries, or general-purpose tools or generally available free programs which are usedunmodified in performing those activities but which are not part of the work. For example, Corresponding Source includes
interface definition files associated with source files for the work, and the source code for shared libraries and dynamicallylinked subprograms that the work is specifically designed to require, such as by intimate data communication or control flow
between those subprograms and other parts of the work.
27

The Corresponding Source need not include anything that users can regenerate automatically from other parts of theCorresponding
Source.
The Corresponding Source for a work in source code form is that same work.
2. Basic Permissions.
All rights granted under this License are granted for the term of copyright on the Program, and are irrevocable provided
the stated conditions are met. This License explicitly affirms your unlimited permission to run the unmodified Program. The
output from running a covered work is covered by this License only if the output, given its content, constitutes a covered
work. This License acknowledges your rights of fair use or other equivalent, as provided by copyright law.
You may make, run and propagate covered works that you do not convey, without conditions so long as your licenseotherwise remains in force. You may convey covered works to others for the sole purpose of having them make modifications
exclusively for you, or provide you with facilities for running those works, provided that you comply with the terms of thisLicense in conveying all material for which you do not control copyright. Those thus making or running the covered works
for you must do so exclusively on your behalf, under your direction and control, on terms that prohibit them from making any
copies of your copyrighted material outside their relationship with you.
Conveying under any other circumstances is permitted solely under the conditions stated below. Sublicensing is not allowed;
section 10 makes it unnecessary.
3. Protecting Users’ Legal Rights From Anti-Circumvention Law. No covered work shall be deemed part of an effective
technological measure under any applicable law fulfilling obligations under article 11 of the WIPO copyright treaty adopted
on 20 December 1996, or similar laws prohibiting or restricting circumvention of such measures.
When you convey a covered work, you waive any legal power to forbid circumvention of technological measures to theextent such circumvention is effected by exercising rights under this License with respect to the covered work, and you
disclaim any intention to limit operation or modification of the work as a means of enforcing, against the work’s users, your or
third parties’ legal rights to forbid circumvention of technological measures.
4. Conveying Verbatim Copies.
You may convey verbatim copies of the Program’s source code as you receive it, in any medium, provided that you
conspicuously and appropriately publish on each copy an appropriate copyright notice; keep intact all notices stating that
this License and any non-permissive terms added in accord with section 7 apply to the code; keep intact all notices of theabsence of any warranty; and give all recipients a copy of this License along with the Program.
You may charge any price or no price for each copy that you convey, and you may offer support or warranty protection for afee.
5. Conveying Modified Source Versions.
You may convey a work based on the Program, or the modifications to produce it from the Program, in the form of sourcecode under the terms of section 4, provided that you also meet all of these conditions:a) The work must carry prominent notices stating that you modified it, and giving a relevant date.
b) The work must carry prominent notices stating that it is released under this License and any conditions added
under section
7. This requirement modifies the requirement in section 4 to “keep intact all notices”.

28c) You must license the entire work, as a whole, under this License to anyone who comes into possession of a copy. This
License will therefore apply, along with any applicable section 7 additional terms, to the whole of the work, and all its parts,
regardless of how they are packaged. This License gives no permission to license the work in any other way, but it does notinvalidate such permission if you have separately received it. d) If the work has interactive user interfaces, each must display
Appropriate Legal Notices; however, if the Program has interactive interfaces that do not display Appropriate Legal Notices,
your work need not make them do so. A compilation of a covered work with other separate and independent works, which
are not by their nature extensions of the covered work, and which are not combined with it such as to form a larger program,in or on a volume of a storage or distribution medium, is called an “aggregate” if the compilation and its resulting copyrightare not used to limit the access or legal rights of the compilation’s users beyond what the individual works permit. Inclusionof a covered work in an aggregate does not cause this License to apply to the other parts of the aggregate.
6. Conveying Non-Source Forms.
You may convey a covered work in object code form under the terms of sections 4 and 5, provided that you also convey themachine-readable Corresponding Source under the terms of this License, in one of these ways:a) Convey the object code in, or embodied in, a physical product (including a physical distribution medium), accompanied by
the Corresponding Source fixed on a durable physical medium customarily used for software interchange.
b) Convey the object code in, or embodied in, a physical product (including a physical distribution medium), accompanied
by a written offer, valid for at least three years and valid for as long as you offer spare parts or customer support forthat product model, to give anyone who possesses the object code either (1) a copy of the Corresponding Source for all
the software in the product that is covered by this License, on a durable physical medium customarily used for softwareinterchange, for a price no more than your reasonable cost of physically performing this conveying of source, or (2) accessto copy the Corresponding Source from a network server at no charge.
c) Convey individual copies of the object code with a copy of the written offer to provide the Corresponding Source. This
alternative is allowed only occasionally and noncommercially, and only if you received the object code with such an offer, in
accord with subsection 6b.
d) Convey the object code by offering access from a designated place (gratis or for a charge), and offer equivalent accessto the Corresponding Source in the same way through the same place at no further charge. You need not require recipients
to copy the Corresponding Source along with the object code. If the place to copy the object code is a network server, theCorresponding Source may be on a different server (operated by you or a third party) that supports equivalent copying
facilities, provided you maintain clear directions next to the object code saying where to find the Corresponding Source.
Regardless of what server hosts the Corresponding Source, you remain obligated to ensure that it is available for as long as
needed to satisfy these requirements.
e) Convey the object code using peer-to-peer transmission, provided you inform other peers where the object code andCorresponding Source of the work are being offered to the general public at no charge under subsection 6d.
A separable portion of the object code, whose source code is excluded from the Corresponding Source as a System Library,need not be included in conveying the object code work.
A “User Product” is either (1) a “consumer product”, which means any tangible personal property which is normally used for
personal, family, or household purposes, or (2) anything designed or sold for incorporation into a dwelling. In determining
whether a product is a consumer product, doubtful cases shall be resolved in favor of coverage. For a particular productreceived by a particular user, “normally used” refers to a typical or common use of that class of product, regardless of thestatus of the particular user or of the way in which the particular user actually uses, or expects or is expected to use, theproduct. A product is a consumer product regardless of whether the product has substantial commercial, industrial or nonconsumer uses, unless such uses represent the only significant mode of use of the product.
“Installation Information” for a User Product means any methods, procedures, authorization keys, or other information
required to install and execute modified versions of a covered work in that User Product from a modified version of its
Corresponding Source. The information must suffice to ensure that the continued functioning of the modified object code isin no case prevented or interfered with solely because modification has been made.
29

If you convey an object code work under this section in, or with, or specifically for use in, a User Product, and the conveying
occurs as part of a transaction in which the right of possession and use of the User Product is transferred to the recipientin perpetuity or for a fixed term (regardless of how the transaction is characterized), the Corresponding Source conveyed
under this section must be accompanied by the Installation Information. But this requirement does not apply if neither you
nor any third party retains the ability to install modified object code on the User Product (for example, the work has been
installed in ROM).
The requirement to provide Installation Information does not include a requirement to continue to provide support service,
warranty, or updates for a work that has been modified or installed by the recipient, or for the User Product in which it has
been modified or installed. Access to a network may be denied when the modification itself materially and adversely affects
the operation of the network or violates the rules and protocols for communication across the network.
Corresponding Source conveyed, and Installation Information provided, in accord with this section must be in a format thatis publicly documented (and with an implementation available to the public in source code form), and must require no special
password or key for unpacking, reading or copying.
7. Additional Terms.
“Additional permissions” are terms that supplement the terms of this License by making exceptions from one or more of itsconditions. Additional permissions that are applicable to the entire Program shall be treated as though they were includedin this License, to the extent that they are valid under applicable law. If additional permissions apply only to part of theProgram, that part may be used separately under those permissions, but the entire Program remains governed by thisLicense without regard to the additional permissions.
When you convey a copy of a covered work, you may at your option remove any additional permissions from that copy, orfrom any part of it. (Additional permissions may be written to require their own removal in certain cases when you modify thework.) You may place additional permissions on material, added by you to a covered work, for which you have or can give
appropriate copyright permission.
Notwithstanding any other provision of this License, for material you add to a covered work, you may (if authorized by the
copyright holders of that material) supplement the terms of this License with terms:a) Disclaiming warranty or limiting liability differently from the terms of sections 15 and 16 of this License; orb) Requiring preservation of specified reasonable legal notices or author attributions in that material or in the Appropriate
Legal Notices displayed by works containing it; orc) Prohibiting misrepresentation of the origin of that material, or requiring that modified versions of such material be marked
in reasonable ways as different from the original version; ord) Limiting the use for publicity purposes of names of licensors or authors of the material; ore) Declining to grant rights under trademark law for use of some trade names, trademarks, or service marks; orf) Requiring indemnification of licensors and authors of that material by anyone who conveys the material (or modified
versions of it) with contractual assumptions of liability to the recipient, for any liability that these contractual assumptions
directly impose on those licensors and authors.
All other non-permissive additional terms are considered “further restrictions” within the meaning of section 10. If theProgram as you received it, or any part of it, contains a notice stating that it is governed by this License along with a termthat is a further restriction, you may remove that term. If a license document contains a further restriction but permits
relicensing or conveying under thisLicense, you may add to a covered work material governed by the terms of that license document, provided that the further
restriction does not survive such relicensing or conveying.
30

If you add terms to a covered work in accord with this section, you must place, in the relevant source files, a statement of theadditional terms that apply to those files, or a notice indicating where to find the applicable terms.
Additional terms, permissive or non-permissive, may be stated in the form of a separately written license, or stated as
exceptions; the above requirements apply either way.
8. Termination.
You may not propagate or modify a covered work except as expressly provided under this License. Any attempt otherwise topropagate or modify it is void, and will automatically terminate your rights under this License (including any patent licenses
granted under the third paragraph of section 11).
However, if you cease all violation of this License, then your license from a particular copyright holder is reinstated (a)provisionally, unless and until the copyright holder explicitly and finally terminates your license, and (b) permanently, if the
copyright holder fails to notify you of the violation by some reasonable means prior to 60 days after the cessation.
Moreover, your license from a particular copyright holder is reinstated permanently if the copyright holder notifies you of theviolation by some reasonable means, this is the first time you have received notice of violation of this License (for any work)from that copyright holder, and you cure the violation prior to 30 days after your receipt of the notice.
Termination of your rights under this section does not terminate the licenses of parties who have received copies or rightsfrom you under this License. If your rights have been terminated and not permanently reinstated, you do not qualify toreceive new licenses for the same material under section 10.
9. Acceptance Not Required for Having Copies. You are not required to accept this License in order to receive or run acopy of the Program. Ancillary propagation of a covered work occurring solely as a consequence of using peer-to-peertransmission to receive a copy likewise does not require acceptance. However, nothing other than this License grants you
permission to propagate or modify any covered work. These actions infringe copyright if you do not accept this License.
Therefore, by modifying or propagating a covered work, you indicate your acceptance of this License to do so.
10. Automatic Licensing of Downstream Recipients. Each time you convey a covered work, the recipient automaticallyreceives a license from the original licensors, to run, modify and propagate that work, subject to this License. You are notresponsible for enforcing compliance by third parties with this License.
An “entity transaction” is a transaction transferring control of an organization, or substantially all assets of one, or
subdividing an organization, or merging organizations. If propagation of a covered work results from an entity transaction,
each party to that transaction who receives a copy of the work also receives whatever licenses to the work the party’s
predecessor in interest had or could give under the previous paragraph, plus a right to possession of the Corresponding
Source of the work from the predecessor in interest, if the predecessor has it or can get it with reasonable efforts.
You may not impose any further restrictions on the exercise of the rights granted or affirmed under this License. For
example, you may not impose a license fee, royalty, or other charge for exercise of rights granted under this License, and you
may not initiate litigation (including a cross-claim or counterclaim in a lawsuit) alleging that any patent claim is infringed bymaking, using, selling, offering for sale, or importing the Program or any portion of it.
11. Patents.
A “contributor” is a copyright holder who authorizes use under this License of the Program or a work on which the Programis based. The work thus licensed is called the contributor’s “contributor version”. A contributor’s “essential patent claims”
are all patent claims owned or controlled by the contributor, whether already acquired or hereafter acquired, that would be
infringed by some manner, permitted by this License, of making, using, or selling its contributor version, but do not include
claims that would be infringed only as a consequence of further modification of the contributor version. For purposes ofthis definition, “control” includes the right to grant patent sublicenses in a manner consistent with the requirements ofthis License. Each contributor grants you a non-exclusive, worldwide, royalty-free patent license under the contributor’s
essential patent claims, to make, use, sell, offer for sale, import and otherwise run, modify and propagate the contents of its
contributor version.
31

In the following three paragraphs, a “patent license” is any express agreement or commitment, however denominated, notto enforce a patent (such as an express permission to practice a patent or covenant not to sue for patent infringement). To“grant” such a patent license to a party means to make such an agreement or commitment not to enforce a patent against
the party.
If you convey a covered work, knowingly relying on a patent license, and the Corresponding Source of the work is notavailable for anyone to copy, free of charge and under the terms of this License, through a publicly available network server
or other readily accessible means, then you must either (1) cause the Corresponding Source to be so available, or (2) arrange
to deprive yourself of the benefit of the patent license for this particular work, or (3) arrange, in a manner consistent with therequirements of this License, to extend the patent license to downstream recipients. “Knowingly relying” means you haveactual knowledge that, but for the patent license, your conveying the covered work in a country, or your recipient’s use of
the covered work in a country, would infringe one or more identifiable patents in that country that you have reason to believe
are valid.
If, pursuant to or in connection with a single transaction or arrangement, you convey, or propagate by procuring conveyanceof, a covered work, and grant a patent license to some of the parties receiving the covered work authorizing them touse, propagate, modify or convey a specific copy of the covered work, then the patent license you grant is automaticallyextended to all recipients of the covered work and works based on it.
A patent license is “discriminatory” if it does not include within the scope of its coverage, prohibits the exercise of, or isconditioned on the non-exercise of one or more of the rights that are specifically granted under this License. You may notconvey a covered work if you are a party to an arrangement with a third party that is in the business of distributing software,
under which you make payment to the third party based on the extent of your activity of conveying the work, and underwhich the third party grants, to any of the parties who would receive the covered work from you, a discriminatory patent
license (a) in connection with copies of the covered work conveyed by you (or copies made from those copies), or (b)primarily for and in connection with specific products or compilations that contain the covered work, unless you entered intothat arrangement or that patent license was granted, prior to 28 March 2007.
Nothing in this License shall be construed as excluding or limiting any implied license or other defenses to infringement that
may otherwise be available to you under applicable patent law.
12. No Surrender of Others’ Freedom.
If conditions are imposed on you (whether by court order, agreement or otherwise) that contradict the conditions of thisLicense, they do not excuse you from the conditions of this License. If you cannot convey a covered work so as to satisfy
simultaneously your obligations under this License and any other pertinent obligations, then as a consequence you may notconvey it at all. For example, if you agree to terms that obligate you to collect a royalty for further conveying from those towhom you convey the Program, the only way you could satisfy both those terms and this License would be to refrain entirely
from conveying the Program.
13. Use with the GNU Affero General Public License. Notwithstanding any other provision of this License, you havepermission to link or combine any covered work with a work licensed under version 3 of the GNU Affero General Public
License into a single combined work, and to convey the resulting work. The terms of this License will continue to apply tothe part which is the covered work, but the special requirements of the GNU Affero General Public License, section 13,
concerning interaction through a network will apply to the combination as such.
14. Revised Versions of this License.
The Free Software Foundation may publish revised and/or new versions of the GNU General Public License from time totime. Such new versions will be similar in spirit to the present version, but may differ in detail to address new problems orconcerns. Each version is given a distinguishing version number. If the Program specifies that a certain numbered version of
the GNU General Public License “or any later version” applies to it, you have the option of following the terms and conditions
either of that numbered version or of any later version published by the Free Software Foundation. If the Program does
not specify a version number of the GNU General Public License, you may choose any version ever published by the Free
Software Foundation.
32

If the Program specifies that a proxy can decide which future versions of the GNU General Public License can be used, thatproxy’s public statement of acceptance of a version permanently authorizes you to choose that version for the Program.
Later license versions may give you additional or different permissions. However, no additional obligations are imposed on
any author or copyright holder as a result of your choosing to follow a later version.
15. Disclaimer of Warranty.
THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN
OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM “AS IS”
WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIEDWARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY
AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE
COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
16. Limitation of Liability.
IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY COPYRIGHT HOLDER, OR
ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FORDAMAGES, INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED
INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITHANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
SUCH DAMAGES.
17. Interpretation of Sections 15 and 16. If the disclaimer of warranty and limitation of liability provided above cannot be given
local legal effect according to their terms, reviewing courts shall apply local law that most closely approximates an absolute
waiver of all civil liability in connection with the Program, unless a warranty or assumption of liability accompanies a copy of
the Program in return for a fee.
END OF TERMS AND CONDITIONS
How to Apply These Terms to Your New Programs
If you develop a new program, and you want it to be of the greatest possible use to the public, the best way to achieve this is
to make it free software which everyone can redistribute and change under these terms.
To do so, attach the following notices to the program. It is safest to attach them to the start of each source file to mosteffectively state the exclusion of warranty; and each file should have at least the “copyright” line and a pointer to where thefull notice is found.
<one line to give the program’s name and a brief idea of what it does.>
Copyright (C) <year> <name of author>
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as
published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied
warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License formore details.
You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.
org/licenses/>. Also add information on how to contact you by electronic and paper mail.

33

If the program does terminal interaction, make it output a short notice like this when it starts in an interactive mode:<program> Copyright (C) <year> <name of author>
This program comes with ABSOLUTELY NO WARRANTY; for details type `show w’. This is free software, and you arewelcome to redistribute it under certain conditions; type `show c’ for details.
The hypothetical commands `show w’ and `show c’ should show the appropriate parts of the General Public License. Of
course, your program’s commands might be different; for a GUI interface, you would use an “about box”.
You should also get your employer (if you work as a programmer) or school, if any, to sign a “copyright disclaimer” for the
program, if necessary.
For more information on this, and how to apply and follow the GNU GPL, see <http://www.gnu.org/licenses/>.
The GNU General Public License does not permit incorporating your program into proprietary programs. If your program isa subroutine library, you may consider it more useful to permit linking proprietary applications with the library. If this is what
you want to do, use the GNU Lesser General Public License instead of this License. But first, please read
<http://www.gnu.org/philosophy/why-not-lgpl.html>.

The MIT License (MIT) (http://opensource.org/licenses/MIT)
Copyright (c) <year> <copyright holders>Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation
files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify,
merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software isfurnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

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