研究業 績 ｜ PUBLICATION LISTCONTENTS

2009

Climate Science82

Physical Oceanography

85

Chemical Oceanography

85

Ocean Floor Geoscience

86

Marine Ecosystem Dynamics

88

Marine Bioscience

90

Living Marine Resources

94

Multiple Field Marine Science

95

HADEEP

97

ATMOSPHERE AND OCEAN RESEARCH INSTITUTE
THE UNIVERSITY OF TOKYOANNUALREPORT81

研究業 績｜ PUBLICATION LIST
Climate Science2009

Abe O., Agata S., Morimoto M., Abe M., Yoshimura K., Hiyama T. and Yoshida N.: A 6.5-year continuous record of sea surface
salinity and seawater isotopic composition at Harbor of Ishigaki Island, southwest Japan. Isotopes in Environmental and
Health Studies, 45, 247-258, 2009.

Akiyoshi H., Zhou L.B., Yamashita Y., Sakamoto K., Yoshiki M., Nagashima T., Takahashi M., Kurokawa J., Takigawa M. and
Imamura T.: A CCM simulation of the breakup of the Antarctic polar vortex in the years 1980-2004 under the CCMVal
scenarios. Journal of Geophysical Research, 114, D03103, 2009.

Aonashi K., Awaka J., Hirose M., Kozu T., Kubota T., Liu G., Shige S., Kida S., Seto S., Takahashi N. and Takayabu Y.N.:
GSMaP passive microwave precipitation retrieval algorithm ─ Algorithm description and validation. Journal of the
Meteorological Society of Japan, 87A, 119-136, 2009.

Chen X., Hu B., Kimoto M. and Li W.: A numerical simulation study of influence of tropical instability waves on air-sea
interaction. Chinese Journal of Atmospheric Sciences, 33, 145-154, 2009.

Chen X. and Kimoto M.: Simulating tropical instability waves in the equatorial eastern Pacific with a coupled circulation model.
Advances in Atmospheric Science, 26, 1015-1026, 2009.

Collins W.D. and Satoh M.: Simulating Global Clouds, Past, Present, and Future. In: “Clouds in the Perturbed Climate System ─
Their Relationship to Energy Balance, Atmospheric Dynamics, and Precipitation”, Heintzenberg J. and Charlson R.J. (eds.),
The MIT Press, 469-486, 2009.

Frankenberg. C., Yoshimura K., Warneke T., Aben I., Butz A., Deutscher N., Griffith D., Hase F., Notholt J., Schneider M.,
Schrijver H. and Rockmann T.: Dynamic processes governing lower-tropospheric HDO/H 2 O ratios as observed fromspace and ground. Science, 325, 1374-1377, 2009.

Gribanov K.G., Imasu R. and Zakharov V.I.: Neural networks for CO 2 profile retrieval from data of GOSAT/TANSO-FTS.
Atmospheric and Oceanic Optics, 22, 890-895, 2009.

Hagos S., Zhang C., Tao W.-K., Lang S., Takayabu Y.N., Shige S., Katsumata M., Olson B. and L’Ecuyer T.: Estimates oftropical diabatic heating profiles: Commonalities and uncertainties. Journal of Climate, 23, 542-558, 2009.

Imada Y. and Kimoto M.: ENSO amplitude modulation related to Pacific decadal variability. Geophysical Research Letters, 36,
L03706, 5pp, 2009.

Imasu R.: Measurement of water vapor isotopes with remote sensing techniques, Stable Water Isotopes in Meteorology.
Meteorological Research Note, 220, 109-124, 2009.（今須良一: リモートセンシングによる水蒸気同位体の測定, 気象研究ノート, 220, 109-124, 2009.）

Imasu R., Saitoh N., Shiomi K., Suto H., Kuze A. and Nakajima M.: Upper atmospheric CO 2 concentration retrieved from thermal
infrared spectrum as observed using GOSAT TANSO-FTS (TIR) sensor. Proceedings of SPIE, 7474-20, 2009.

Inatsu M. and Kimoto M.: A scale interaction study on East Asian cyclogenesis using a general circulation model with aninteractively nested regional model. Monthly Weather Review, 137, 2851-2868, 2009.

Inoue M. and Takahashi M.: Connection between the Asian summer monsoon and stratosphere-troposphere circulation over the
Asian region. Journal of the Meteorological Society of Japan, 87, 119-138, 2009.

Ishii M. and Kimoto M.: Reevaluation of historical ocean heat content variations with an XBT depth bias correction. Journal of
Oceanography, 65, 287-299, 2009.

Kawatani Y., Takahashi M., Sato K., Alexander S.P. and Tsuda T.: Global distribution of atmospheric waves in the equatorial
upper troposphere and lower stratosphere: AGCM simulation of sources and propagation. Journal of GeophysicalResearch, 114, D01102, 2009.

Kimoto, M., 2009: Prospects of Numerical Weather Prediction for the Future. In“Past, Present and Future of Numerical
Weather Prediction ─ The 50th Anniversary of Operational Numerical Weather Prediction in Japan. (A report on the
public lecture in meteorology during the 2009 spring assembly of the Meteorological Society of Japan)”. Tenki, 56,

908-913, 2009.（木本昌秀: 今後の数値予報への期待. 2009年度春季大会

公開気象講演会「数値予報の過去・現在・未来

─数値予報現業運用開始50周年記念」の報告. 天気, 56, 908-913, 2009.）
Kosaka Y., Nakamura H., Watanabe M. and Kimoto M.: Analysis on the dynamics of a wave-like teleconnection pattern along
the summertime Asian jet based on a reanalysis dataset and climate model simulations. Journal of the MeteorologicalSociety of Japan, 87, 561-580, 2009.

Kozu T., Iguchi T., Kubota T., Yoshida N., Seto S., Kwiatkowski J. and Takayabu Y.N.: Feasibility of raindrop size distribution
parameter estimation with TRMM precipitation radar, Journal of the Meteorological Society of Japan, 87A, 53-66, 2009.
Kug J.-S., Ham Y.-G., Kimoto M., Jin F.-F. and Kang I.-S.: New approach for optimal perturbation method in ensemble climate
prediction with empirical singular vector. Climate Dynamics, 35, 331-340, 2009.

Kurahashi-Nakamura T., Abe-Ouchi A. and Yamanaka Y.: Effects of physical changes in the ocean on the atmospheric pCO 2 :glacial-interglacial cycles. Climate Dynamics, 35, 713-719, 2009.
Kuroda T., Mevedev A.S., Hartogh P. and Takahashi M.: On forcing the winter polar warmings in the Martian middle atmosphere
during dust storms. Journal of the Meteorological Society of Japan, 87, 913-921, 2009.

Liu P., Satoh M., Wang B., Fudeyasu H., Nasuno T., Li T., Miura H., Taniguchi H., Masunaga H., Fu X. and Annamalai
H.: An MJO Simulated by the NICAM at 14-km and 7-km Resolutions. Monthly Weather Review, 137, 3254-3268,
2009.

Meehl, G.A., Goddard L., Murphy J., Stouffer R.J., Boer G., Danabasoglu G., Dixon K., Giorgetta M.A., Greene A., Hawkins
E., Hegerl G., Karoly D., Keenlyside N., Kimoto M., Kirtman B., Navarra A., Pulwarty R., Smith D., Stammer D. andStockdale T.: Decadal Prediction: Can it be skillful? Bulletin of the American Meteorological Society, 90, 1467-1485,
2009.

Miura H., Satoh M. and Katsumata M.: Spontaneous onset of a Madden-Julian oscillation event in a cloud-system-resolving
simulation, Geophysical Research Letters, 36, L13802, 5pp, 2009.

Mukai M. and Nakajima T.: Potentiality of aerosols in changing the precipitation field in Asia. SOLA, 5, 97-100, 2009.

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研究業績｜ PUBLICATION LIST

Murphy J., Kattsov V., Keenlyside N., Kimoto M., Meehl G.A., Mehta V., Pohlmann H., Scaife A. and Smith D.: Towards
prediction of decadal climate variability and change. A white paper for the decadal climate variability session of the World
Climate Conference-3, 31 August-4 September 2009, Geneva, 2009.

Nakajima T.Y., Higurashi A., Nakajima T., Fukuda S. and Katagiri S.: Development of cloud and aerosol retrieval algorithms for
ADEOS-II/GLI mission. Journal of Remote Sensing Society of Japan, 29, 60-69, 2009.

Nakajima T.Y., Masunaga H. and. Nakajima T.: Near-global scale retrieval of the optical and microphysical properties of clouds
from Midori-II GLI and AMSR data. Journal of Remote Sensing Society of Japan, 29, 29-39, 2009.

Nakajima T.Y., Nakajima T., Yoshimori K., Mishra S.K. and Tripathi S.N.: Development of a light scattering solver applicableto particles of arbitrary shape on the basis of the surface integral equations method of Müller-type. I. Methodology,
accuracy of calculation, and electromagnetic current on the particle surface. Applied Optics, 48, 3526-3536, 2009.

Nakajima T. (ed.): Explorers of the climate science - Scientists measuring the global warming. Gijutsuhyoron Press, 240pp., 2009.（中島映至（監修）: 「気候科学の冒険者―温暖化を測るひとびと」, 技術評論社, 240pp, 2009.）

Nakajima T. and Inoue T. (trans): 2009: Changing Planet, The View From Space, King M.D., Parkinson C.L., Partington K.C. andWilliams R.G. (eds.), Maruzen Press, 384pp., 2009.（中島映至・井上豊志郎（監訳）: 「変わりゆく地球―衛星写真にみる
環境と温暖化」, King M.D. et al.（著），丸善, 384pp, 2009.）
Nakajima T. (chair): For Tackling the Problem of Global Warming ─Analysis of Current Knowledge and Measures: Alternatives for
Action, Report from the Science Council of Japan, Committee for analysis of global warming problem, March, 2009.（中島映至: 球温暖化問題解決のために―知見と施策の分析、我々の取るべき行動の選択肢. 日本学術会議地球温暖化問題に関わる知見と施策に関する分析委員会対外報告書, 2009.）
Nakajima T., Murakami H., Hori M., Nakajima T.Y., Yamamoto H., Ishizaka J., Tateishi R., Aoki T., Takamura T., Kuji M., Nguyen
D.D., Ono A., Fukuda S. and Muramatsu K.: Overview and science highlights of the ADEOS-II/GLI project. Journal of
Remote Sensing Society of Japan, 29, 11-28, 2009.

Nakajima T. and Schulz M.: What do we know about large-scale changes of aerosols, clouds, and the radiation budget? In:“Clouds in the Perturbed Climate System: Their Relationship to Energy Balance, Atmospheric Dynamics, and Precipitation”,
Heintzenberg J. and Charlson R.J. (eds.), The MIT Press, 597pp, 2009.

Nakajima T. and Takemura T.: Explanation of the radiative forcing. Tenki, 56, 997-999. 2009.（中島映至・竹村俊彦: 新用語解説「放射強制力」. 天気, 56, 997-999, 2009.）

Nakajima T. and Yamasoe M.: Current Problems in Atmospheric Radiation (IRS2008). American Institute of Physics, Melville, New
York, 2009.

Nakamura H., Asuma A., Terao T. and Nakajima T.: The first stage analysis of the JMS-SCJ/IAMAS Committee questionnaire
for young scientists. Tenki, 56, 575-585, 2009.（中村 尚・遊馬芳雄・寺尾 徹・中島映至: 日本気象学会・日本学術会議
IAMAS小委員会共同実施「若手研究者アンケート」第1次集計結果の分析, 天気, 56, 575-585, 2009. ）Nasuno T., Miura H., Satoh M., Noda A.T. and Oouchi K.: Multi-scale organization of convection in a global numerical simulationof the December 2006 MJO event using explicit moist processes. Journal of the Meteorological Society of Japan, 87,
335-345, 2009.

Niwano M., Hayashida S., Akiyoshi H. Takahashi M.: Seasonal cycles of Stratospheric Aerosol and Gas Experiment II nearbackground aerosol in the lower stratosphere. Journal of Geophysical Research, 114, D14306, 2009.
Noda A.T., Oouchi K., Satoh M., Tomita H., Iga S.-I. and Tsushima Y.: Importance of the subgrid-scale turbulent moist process─ cloud distribution in global cloud-resolving simulations. Atmospheric Research, 96, 208-217, 2009.

Ohgaito R. and Abe-Ouchi A.: The effect of sea surface temperature bias in the PMIP2 AOGCMs on mid-Holocene Asianmonsoon enhancement. Climate Dynamics, 33, 975-983 2009.

O'hishi R. and Abe-Ouchi A.: Influence of dynamic vegetation change on climate change arising from increasing CO 2 . Climate
Dynamics, 33, 645-663, 2009.

O'hishi R., Abe-Ouchi A., Prentice C. and Sitch S.: Vegetation dynamics and plant CO 2 responses as positive feedbacks in agreenhouse world. Geophysical Research Letters, 36, L11706, 5pp, 2009.

Oouchi K., Noda A.T., Satoh M., Wang B., Xie S.-P., Takahashi H. and Yasunari T.: Asian summer monsoon simulated by aglobal cloud-system resolving model─Diurnal to intra-seasonal variability. Geophysical Research Letters, 36, L11815,
5pp, 2009.

Oouchi K., Noda A.T., Satoh M., Miura H., Tomita H., Nasuno T. and Iga S.-I.: A simulated preconditioning of typhoon genesis
controlled by a boreal summer Madden-Julian Oscillation event in a global cloud-resolving mode. SOLA, 5, 65-68,
2009.

Ota Y., Higurashi A., Nakajima T. and Yokota T.: Matrix formulations of radiative transfer including the polarization effect in acoupled atmosphere-ocean system. Journal of Quantitative Spectroscopy & Radiative Transfer, 111, 878-894, 2009.

Otto-Bliesner B.L., Schneider R., Brady E.C., Kucera M., Abe-Ouchi A., Bard E., Braconnot P., Crucifix M., Hewitt C., KageyamaM., Marti O., Paul A., Rosell-Melé A., Waelbroeck C., Weber S.L., Weinelt M. and Yu Y.: A comparison of PMIP2
model simulations and the MARGO proxy reconstruction for tropical sea surface temperatures at last glacial maximum.
Climate Dynamics, 32, 799-815, 2009.

Quaas J., Bony S., Collins W.D., Donner L., Illingworth A., Jones A., Lohmann U., Satoh M., Schwartz S.E., Tao W.-K. andWood R.: Current understanding and quantification of clouds in the changing climate system and strategies for reducing
critical uncertainties. In:“ Clouds in the Perturbed Climate System: Their Relationship to Energy Balance, Atmospheric
Dynamics, and Precipitation”, Heintzenberg J. and Charlson R.J. (eds.), The MIT Press, pp.557-573, 2009.

Rojas M., Moreno P., Kageyama M., Crucifix M., Hewitt C., Abe-Ouchi A., Ohgatio R., Brady E.C. and Hope P.: The SouthernWesterlies during the last glacial maximum in PMIP2 simulations. Climate Dynamics, 32, 525-548, 2009.

Saitoh N., Imasu R., Ota Y. and Niwa Y.: CO 2 retrieval algorithm for the thermal infrared spectra of the Greenhouse Gases
Observing Satellite: Potential of retrieving CO 2 vertical profile from high-resolution FTS sensor. Journal of GeophysicalResearch, 114, D17305, 16pp, 2009.

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Sato K., Watanabe S. Kawatani Y. Tomikawa Y. Miyazaki K. and Takahashi M.: On the origins of mesospheric gravity waves.
Geophysical Research Letters, 36, L19801, 2009.

Sato N., Takahashi C., Seiki A., Yoneyama K., Shirooka R. and Takayabu Y.N.: An evaluation of the reproducibility of the
Madden-Julian oscillation in the CMIP3 multi-models. Journal of the Meteorological Society of Japan, 87, 791-805, 2009.

Sato T., Miura H., Satoh M., Takayabu Y.N. and Wang Y.: Diurnal cycle of precipitation over the tropics simulated by a global
cloud resolving model. Journal of Climate, 22, 4809-4826, 2009.

Sato Y., Nakajima T., Suzuki K. and Iguchi T.: A Monte-Carlo size integration approximation for collision and coagulation growth
processes of hydrometeors in a bin-type model. Journal of Geophysical Research, 114, D09215, 18pp, 2009.

Satoh M., Matsuda Y.: Statistics on high-cloud areas and their sensitivities to cloud microphysics using single-cloudexperiments. Journal of the Atmospheric Sciences, 66, 2659-2677, 2009.

Science Council of Japan: For Tackling the Problem of Global Warming ―Analysis of Current Knowledge and Measures:
Alternatives for Action. Report of Committee for Global Warming Problem Analysis, 74pp, 2009.（学術会議，2009：地球温暖化問題解決のために―知見と施策の分析，我々の取るべき行動の選択肢，日本学術会議地球温暖化問題に関わる知見と施策に関する分析委員会対外報告書，74pp.）

Seiki A., Takayabu Y.N., Yoneyama K., Naoki S. and Yoshizaki M.: The oceanic Response to the Madden-Julian Oscillation and
ENSO. SOLA, 5, 93-96, 2009.

Shige S., Takayabu Y.N., Kida S., Tao W.-K., Zeng X., Yokoyama C. and L’Ecuyer T.: Spectral retrieval of latent heating profiles
from TRMM PR Data. Part IV: Comparisons of lookup tables from two- and three-dimensional cloud-resolving model
simulations. Journal of Climate, 22, 5577-5594, 2009.

Shin S.-H., Kimoto M. and Ha K.-J.: Comparison of two different vertical diffusion schemes in amplitude and phase of thediurnal variation and Its impact on a GCM. Geophysical Research Letters, 36, L18706, 7pp, 2009.

Shin S.-H., Kimoto M., Ha K.-J. and Yun K.-S.: Impact of different diffusion schemes on simulated rainfall: Land -Ocean
contrast. Journal of Geophysical Research, 114, D13101, 12pp, 2009.
Sugiura N., Awaji T., Masuda S., Toyoda T., Igarashi H., Ishikawa Y., Ishii M. and Kimoto M.: The potential for decadal
predictability in the North Pacific region. Geophysical Research Letters, 36, L20701, 6pp, 2009.

Takamura T., Takenaka H., Cui Y., Nakajima T.Y., Higurashi A., Fukuda S., Kikuchi N., Nakajima T., Sato I. and Pinker R.T.:
Aerosol and cloud validation system based on SKYNET observations: Estimation of shortwave radiation budget using
ADEOS-II/GLI data. Journal of Remote Sensing Society of Japan, 29, 40-53, 2009.

Takayabu Y.N. and Masunaga H.,: Clouds and precipitation : Extreme rainfall and rain from shallow clouds, In:“Clouds in the
Perturbed Climate System: Their Relationship to Energy Balance, Atmospheric Dynamics, and Precipitation”, Heintzenberg J.
and Charlson R.J. (eds.), The MIT Press, pp.107-126, 2009.

Takayabu Y.N. and Hikosaka K.: A statistical analysis of oceanic rainfall characteristics in the Baiu season utilizing TRMM PR
data, Journal of the Meteorological Society of Japan, 87A, 341-354, 2009.

Takemura T., Egashira M., Matsuzawa K., Ichijo H., O'ishi R. and Abe-Ouchi A.: Global distribution and radiative forcing of soil
dust aerosols in the Last Glacial Maximum simulated by the aerosol climate model. Atmospheric Chemistry and Physics, 9,3061-3073, 2009.

Takigawa M., Niwano M. Akimoto H. Takahashi M. and Kobayashi K.: Projection of surface ozone over East Asia in 2020.
Journal of Agricultural Meteorology, 65, 161-166, 2009.

Tao W.-K., Lang S., Zeng X., Shige S. and Takayabu Y.N.: Relating convective and stratiform rain to latent heating. Journal of
Climate, 23, 1874-1893, 2009.
Terasaki K., Tanaka H.L. and Satoh M.: Characteristics of the Kinetic Energy Spectrum of NICAM model atmosphere. SOLA, 5,
180-183, 2009.

Urakawa L.S. and Hasumi H.: A remote effect of geothermal heat on the global thermohaline circulation. Journal of GeophysicalResearch, 114, C07016, 11pp, 2009.

Urakawa L.S. and Hasumi H.: The energetics of global thermohaline circulation and its wind-enhancement. Journal of Physical
Oceanography, 39, 1715-1728, 2009.

Watanabe E. and Hasumi H.: Pacific water transport in the western Arctic Ocean simulated by an eddy-resolving coupled sea
ice-ocean model. Journal of Physical Oceanography, 39, 2194-2211, 2009.

Watanabe M.: Self-limiting feedback between baroclinic waves and a NAO-like sheared zonal flow. Geophysical Research Letters,
36, L08803, 5pp, 2009.

Watanabe M., S. Emori, M. Satoh, and H. Miura, 2009: A PDF-based hybrid prognostic cloud scheme for general circulation
models. Climate Dynamics, 33, 795-816, 2009.

Watanabe S., Tomikawa Y., Sato K., Kawatani Y., Miyazaki K. and Takahashi M.: Simulation of the eastward 4-day wave in the
Antarctic winter mesosphere using a gravity wave resolving general circulation model. Journal of Geophysical Research,
114, D16111, 2009.

Yamamoto M. and Takahashi M.: Influences of Venus’topography on fully developed superrotation and near-surface flow. Earth,Planets and Space, 61, 45-48, 2009.

Yamamoto M. and Takahashi M.: Dynamical effects of solar heating below the cloud layer in a Venus-like atmosphere. Journal ofGeophysical Research, 114, E12004, 2009.
Yokoi S. and Takayabu Y.N.: Multi-model projection of global warming impact on tropical cyclone genesis frequency over thewestern North Pacific. Journal of the Meteorological Society of Japan, 87, 525-538, 2009.
Yokoi S., Takayabu Y.N. and Chan J.C.L.: Tropical cyclone genesis frequency over the western North Pacific simulated in
medium-resolution coupled general circulation models. Climate Dynamics, 33, 665-683, 2009.

Yoshimori M. and Abe-Ouchi A.: The role and potential of Quaternary research in constraining future climate sensitivity. The
Quaternary Research (Daiyonki-Kenkyu), 48, 143-162, 2009.（吉森正和・阿部彩子: 気候感度の制約において第四紀研究の果たす役割と可能性について．第四紀研究, 48, 143-162, 2009.）

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Yoshimori M. and Broccoli A.J.: On the link between Hadley circulation changes and radiative feedback processes. GeophysicalResearch Letters, 48, L20703, 2009.
Yoshimori M., Yokohata T. and Abe-Ouchi A.: A comparison of climate feedback strength between CO2 doubling and LGM
experiments. Journal of Climate, 22, 3374-3395, 2009.

Yoshimura K.: Meteorology, climate and stable water isotopes. Meteorological Research Note, 220, 1-14, 2009.（芳村 圭: 気象・
気候と水の安定同位体比との関わり. 気象研究ノート, 220, 1-14, 2009.）
Yoshimura, K., Models for stable water isotopes and their analysis. Meteorological Research Note, 220, 79-108, 2009.（芳村 圭:
水同位体比のためのモデリングとモデルを用いた解析．気象研究ノート, 220, 79-108, 2009.）

Yoshimura, K. and K. Ichiyanagi: A reconsideration of seasonal variation in precipitation deuterium excess over East Asia.
Journal of Japan Society of Hydrology & Water Resources, 22, 262-276, 2009. （芳村 圭・一柳錦平: 東アジアにおける降水d-excess季節変動に関する再考察. 水文・水資源学会誌, 22, 262-276, 2009.）

Yoshimura K., Ichiyanagi K. and Sugimoto A. (eds.): Stable Water Isotopes in Meteorology, Meteorological Research Note Vol. 220,
Meteorological Society of Japan, 129pp, 2009.（芳村 圭・一柳錦平・杉本敦子（編）: 気象研究ノート第220号「気象学における水安定同位体比の利用」，日本気象学会, 129pp，2009.）

Yoshimura K. and Kanamitsu K.: Specification of external forcing for regional model integrations. Monthly Weather Review, 137,
1409-1421, 2009.

Physical Oceanography

Akitomo K., Tanaka K. and Kumagai M.: Annual cycle of circulations in Lake Biwa. Part 2: Mechanisms. Limnology, 10, 119-129,
2009.

Akitomo K., Tanaka K., Kumagai M. and Jiao C.: Annual cycle of circulations in Lake Biwa. Part 1: Model validation. Limnology,
10, 105-118, 2009.

Kato F. and Kawabe M.: Volume transport and distribution of deep circulation at 165W in the North Pacific. Deep-Sea ResearchPart I, 56, 2077-2087, 2009.
Kawabe M.: Ocean currents and life. In:“Dynamics of Ocean Biosystems 5, Ocean and Life ─Seeking for the view of life for marineorganisms”, Tsukamoto K. (eds.), Tokai University Press, pp. 52-68, 2009.（ 川辺正樹: 海流と生命. 「海洋生命系のダイナ
ミクス5

海と生命―「海の生命観」を求めて」, 塚本勝巳（編）, 東海大学出版会, pp.52-68, 2009.）

Kawabe M.: Preliminary Report of the Hakuho Maru Cruise KH-08-3 leg 2, 40p, 2009.

Kawabe M., Fujio S., Yanagimoto D. and Tanaka K.: Water masses and currents of deep circulation southwest of the Shatsky
Rise in the western North Pacific. Deep-Sea Research Part I, 56, 1675-1687, 2009.
Komaki K. and Kawabe M.: Deep-circulation current through the Main Gap of the Emperor Seamounts Chain in the North
Pacific. Deep-Sea Research Part I, 56, 305-313, 2009.

Mashiko W., Niino H. and Kato T.: Numerical simulation of a tornadogenesis in a mini-supercell in an outer rainband of Typhoon
Shanshan on 17 September 2006. Monthly Weather Review, 137, 4238-4260, 2009.

Michida Y., Tanaka K., Komatsu T., Ishigami, K. and Nakajima M.: Effects of divergence, convergence and eddy diffusion
upon the transport of objects drifting on the sea surface. Bulletin on Coastal Oceanography, 46, 77-83, 2009.（ 道田
豊・田中 潔・小松輝久・石神健二・中島理人: 海洋の収束・発散・拡散等による表層浮遊物の移動. 沿岸海洋研究, 46, 77-83,
2009.）Nakanishi M. and Niino H.: Development of an improved turbulence closure model for the atmospheric boundary layer. Journal of
the Meteorological Society of Japan, 87, 895-912, 2009.

Oka E.: Seasonal and interannual variation of North Pacific Subtropical Mode Water in 2003-2006. Journal of Oceanography,
65, 151-164, 2009.

Oka E., Toyama L. and Suga T.: Subduction of North Pacific central mode water associated with subsurface mesoscale eddy.
Geophysical Research Letters, 36, L08607, 4pp, 2009.

Oka E., Toyama K., Sukigara C., Shimada K., Yoshida J., and Suga T., 2009: New aspects on the formation and circulation of
North Pacific Subtropical Mode Water based on Argo and shipboard observations. Kaiyo Monthly, 41, 676-682.（岡 英
太郎・遠山勝也・鋤柄千穂・嶋田啓資・吉田次郎・須賀利雄: アルゴと船舶観測による北太平洋亜熱帯モード水の新たな形成・循
環像. 月刊海洋, 41, 676-682, 2009.）
Oka E., Uehara K., Sukigara C., and Suga T., 2009: Physical and biogeochemical processes of North Pacific Subtropical Mode
Water. Kaiyo Monthly, 41, 667.（岡 英太郎・植原量行・鋤柄千穂・須賀利雄: 北太平洋亜熱帯モード水の物理・化学・生物過程.
月刊海洋, 41, 667, 2009.）

Otobe H., Onishi H., Inada M., Michida Y. and Terazaki M.: Estimation of water circulation in Otsuchi Bay, Japan inferred fromADCP observations. Coastal Marine Science, 33, 78-86, 2009.

Tanaka K., Michida Y., Komatsu T. and Ishigami K.: Spreading of river water in Suruga Bay. Journal of Oceanography, 65,
165-177, 2009.

Tannka K., Michida Y., Komatsu T., and Ishigami K.: Numerical experiments on the circulation in Suruga Bay: responses to wind
forcing and river discharge. Kaiyo Monthly, 41, 63-73, 2009.（田中 潔・道田 豊・小松輝久・石神健二: 数値モデルから見た
駿河湾の流況―風と河川水流入への応答. 月刊海洋, 41, 63-73, 2009.）

Ueno H., Freeland H.J., Crawford W.R., Onishi H., Oka E., Sato K. and Suga T.: Anticyclonic eddies in the Alaskan Stream.
Journal of Physical Oceanography, 39, 934-951, 2009.

Wada A., Niino H. and Nakano H.: Roles of vertical turbulent mixing in the ocean response to Typhoon Rex (1998). Journal of
Oceanography, 65, 373-396, 2009.

Chemical Oceanography

Amakawa H., Sasaki K. and Ebihara M.: Nd isotopic composition in the central North Pacific. Geochimica et Cosmochimica Acta,73, 4705-4716, 2009.

ATMOSPHERE AND OCEAN RESEARCH INSTITUTE
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研究業績｜ PUBLICATION LIST

Gamo, T.: Submarine hydrothermal activity. In:“Encyclopedia Britannica on line Japan”, Britannica Japan Co., Ltd., 2009.（蒲生俊敬:
海底熱水活動. 「ブリタニカ国際大百科事典」, ブリタニカ・ジャパン（編）, ブリタニカ・ジャパン株式会社, pp.1-8, 2009.）

Hara Y., Obata H., Doi T., Hongo Y., Gamo T., Takeda S. and Tsuda A.: Rare earth elements in seawater during an iron-induced
phytoplankton bloom of the western subarctic Pacific (SEEDS-II). Deep-Sea Research Part II, 56, 2839-2851, 2009.
Hori M., Suzuki T., Monthum Y., Srisombat T., Tanaka Y., Nakaoka M. and Mukai H.: High seagrass diversity and canopy heightincrease the associated fish diversity and abundance. Marine Biology, 156, 1447-1458, 2009.

Ijiri A., Tsunogai U., Gamo T., Nakagawa F., Sakamoto T. and Saito S.: Enrichment of adsorbed methane in authigenic carbonate
concretions of the Japan Trench. Geo-Marine Letters, 29, 301-308, 2009.

Kameyama S., Tanimoto H., Inomata S., Tsunogai U., Ooki A., Yokouchi Y., Takeda S., Obata H. and Uematsu M.: Equilibrator

inlet-proton transfer reaction-mass spectrometry (EI-PTR-MS) for sensitive, high-resolution measurement of dimethyl
sulfide dissolved in seawater. Analytical Chemistry, 81, 9021-9026, 2009.

Kobayashi Y., Kim C., Yoshimizu C., Kohzu A., Tayasu I. and Nagata T.: Longitudinal changes in bacterial community
composition in river epilithic biofilms ―influence of nutrients and organic matter. Aquatic Microbial Ecology, 54,
135-152, 2009.

Maki K., Kim C., Yoshimizu C., Tayasu I., Miyajima T. and Nagata T.: Autochthonous origin of semi-labile dissolved organiccarbon in a large monomictic lake (Lake Biwa) ―Carbon stable isotopic evidence. Limnology, 11, 143-153, 2010
(published online 2009).

Miki T., Giuggioli L., Kobayashi Y., Nagata T. and Levin S.A.: Vertically structured prokaryotic community can control theefficiency of the biological pump in the oceans. Theoretical Ecology, 2, 199-216, 2009.

Miyajima T., Tsuboi Y., Tanaka Y. and Koike I.: Export of inorganic carbon from two Southeast Asian mangrove forests toadjacent estuaries as estimated by the stable isotope composition of dissolved inorganic carbon. Journal of GeophysicalResearch, 114, G01024, 12pp, 2009.

Miyajima T., Yoshimizu C., Tsuboi Y., Tanaka Y., Tayasu I, Nagata T. and Koike I.: Longitudinal distribution of nitrateδ15N andδ18 O in two contrasting tropical rivers ―implications for instream nitrogen cycling. Biogeochemistry, 95, 243-260,
2009.

Motegi C. and Nagata T.: Addition of monomeric and polymeric organic substrates alleviates viral lytic pressure on bacterial
communities in coastal seawaters. Aquatic Microbial Ecology, 57, 343-350, 2009.

Motegi C., Nagata T., Miki T., Weinbauer M.G., Legendre L. and Rassoulzadegan F.: Viral control of bacterial growth efficiency
in marine pelagic environments. Limnology and Oceanography, 54, 1901-1910, 2009.

Nagata T.: Microbial loop in the sea. In:“ Dynamics of Ocean Biosystems 5, Ocean and Life ―Seeking for the view of life for marineorganisms”, Tsukamoto K. (eds.), Tokai University Press, pp. 156-170, 2009.（永田 俊: 海のなかのミクロな環. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 塚本勝巳 （編）, 東海大学出版会, pp.306-322, 2009.）

Ozaki H., Obata H., Naganobu M. and Gamo T.: Long-term bottom water warming in the North Ross Sea. Journal of
Oceanography, 65, 235-244, 2009.

Saito T., Kawamura K., Tsunogai U., Chen T.-Y., Matzueda H., Nakatsuka T., Gamo T., Uematsu M. and Huebert. B.J:
Photochemical histories of non-methane hydrocarbons inferred from their stable carbon isotope ratio measurements
over East Asia. Journal of Geophysical Research, 114, D11303, 12pp, 2009.

Sano Y., Kameda A., Takahata N., Yamamoto J. and Nakajima J.: Tracing extinct spreading center in SW Japan by helium-3
emanation. Chemical Geology, 266, 50-56, 2009.

Sano Y., Tokutake T., Takahata N., Shirai K., Fujio S. and Tanaka K.: Distribution of 3 He plume and deep-sea circulation in thenorthwestern Pacific Ocean. Geochimica et Cosmochimica Acta, 73, A1153, 2009.

Sugimoto R., Kasai A., Miyajima T. and Fujita K.: Nitrogen isotope ratios of nitrate as a clue to the origin of nitrogen on the
Pacific coast of Japan. Continental Shelf Research, 29, 1303-1309, 2009.

Sugimoto R., Kasai A., Miyajima T. and Fujita K.: Transport of oceanic nitrate from the continental shelf to the coastal basin in
relation to the path of the Kuroshio. Continental Shelf Research, 29, 1678-1688, 2009.
Sugimoto R., Kasai A., Miyajima T. and Fujita K: Controlling factors of seasonal variation in the nitrogen isotope ratio of nitrate
in a eutrophic coastal environment. Estuarine, Coastal and Shelf Science, 85, 231-240, 2009.

Sugimoto R., Kasai A., Miyajima T. and Fujita K.: Modeling phytoplankton production in Ise Bay, Japan ―use of nitrogenisotopes to identify dissolved inorganic nitrogen sources. Estuarine, Coastal and Shelf Science, 86, 450-466, 2010
(published online 2009).

Tanaka Y., Miyajima T. and Ogawa H.: Bacterial degradability of dissolved organic carbon in coral mucus. Proceedings of the 11
International Coral Reef Symposium Ft. Lauderdale, Florida, 7-11 July 2008 Session number 19, 945-949, 2009.

th

Tanaka Y., Miyajima T., Ogawa H., Hayashibara T. and Koike I.: Response of calcification of corals to nutrient loading. Chikyu
Monthly (Supplement) 59, 34-38, 2009.（田中泰章・宮島利宏・小川浩史・林原 毅・小池勲夫: 栄養塩負荷に対する石灰化応
答機構の解明．月刊地球, 号外 59, 34-38, 2009）

Tanaka Y., Miyajima T., Umezawa Y., Hayashibara T., Ogawa H. and Koike I.: Net release of dissolved organic matter by thescleractinian coral Acropora pulchra. Journal of Experimental Marine Biology and Ecology, 377, 101-106, 2009.

Yamamoto J., Nishimura K., Sugimoto T., Takemura K., Takahata N. and Sano Y.: Diffusive fractionation of noble gases inmantle with magma channels: Origin of low He/Ar in mantle-derived rocks. Earth and Planetary Science Letters, 280,
167-174, 2009.

Ocean Floor Geoscience

Ashi J., Kawamura K. and Kinoshita M.: Seafloor observation and monitoring in the Nankai accretionary prism. In:“Accretionary
Prisms and Megathrust Seismogenic Zones. Toward a Better Understanding of the Nankai Earthquakes”, Kimura G, and Kinoshita
M. (eds.), pp. 65-122, University of Tokyo Press 2009.（ 芦 寿一郎・川村喜一郎・木下正高: 南海付加体の海底観察・観測.
「付加体と巨大地震発生帯，南海地震の解明に向けて」, 木村 学・木下正高（編），東京大学出版会， pp.65-122, 2009.）

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研究業績｜ PUBLICATION LIST

Catto N.R., Yim W.W.-S., Antonioli F. and Yokoyama Y.: Continental shelves, including contributions from the 17th INQUA
Congress, Cairns. Quaternary International, 206, 1-2, 2009.

Chang. Y.-P., Chen M.-T., Yokoyama Y., Matsuzaki H., Thompson W.G., Kao S.-J. and Kawahata H.: Monsoon hydrography andproductivity changes in the East China Sea during the past 100.000 years ―Okinawa Trough evidence (MD012404).
Paleoceanography, 24, PA3208, 15pp, 2009.

DeDeckker P. and Yokoyama Y.: Micropalaeontolobical evidence for Late Quaternary sea-level changes in Bonaparte Gulf,
Australia. Global and Planetary Change, 66, 85-92, 2009.
Felis T., Suzuki A., Kuhnert H., Dima M., Lohmann G. and Kawahata H.: Subtropical coral reveals abrupt early 20th century
freshening in the western North Pacific Ocean. Geology, 37, 527-530, 2009.

Imanishi Y.: High-frequency parasitic modes of superconducting gravimeters. Journal of Geodesy, 83, 455-467, 2009.

Imanishi Y., Tamura Y., Ikeda H. and Okubo S.: Permanent gravity changes recorded on superconducting gravimeters fromearthquakes in central Japan ―The Noto Hantou and Niigataken Chuetsu-oki events in 2007. Journal of Geodynamics,
48, 260-268, 2009.

Iryu Y., Kawahata H., Kuroda J., Nishi H., Yokoyama Y. and Ohkouchi N.: Earth’s surface environment study, Monthly Earth, 32,

112-119, 2009.（井龍康文・川幡穂高・黒田潤一郎・西 弘嗣・横山祐典・大河内直彦: 地球表層環境―古環境から未来環境へ，
現状を生き抜くために. 月刊地球, 32, 112-119, 2009.）

Ishizaki Y., Ohkushi K., Ito T. and Kawahata H.: Abrupt changes of intermediate-water oxygenation in the northwestern Pacificduring the last 27 kyr. Geo-Marine Letters, 29, 125-131, 2009.

Isono D., Yamamoto M., Irino T., Oba T., Murayama M., Nakamura T. and Kawahata H.: The 1,500-year climate oscillation in the
mid-latitude North Pacific during the Holocene. Geology, 37, 591-594, 2009.

Kawahata H.: Environments in Jomon era I: Life style of Jomon people and climatic change. Chishitu News, 659, 11-20, 2009.
（川幡穂高: 縄文時代の環境，その１―縄文人の生活と気候変動．地質ニュース，659, 11-20, 2009．）
Kawahata H. and Minoshima K.: Ocean environmental change in Samriku productive region. In:“Dynamics of Ocean Biosystems 5,
Ocean and Life - Seeking for the view of life for marine organisms”, Tsukamoto K. (eds.), Tokai University Press, pp. 13-30,
2009.（ 川幡穂高・蓑島佳代: 海底のコアサンプルが解き明かす三陸沖大漁場の歴史．
「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 塚本勝巳（編）, 東海大学出版会, pp. 13-30, 2009）．
Kawahata H. and Minoshima K.: Influence to global environments by eolian dust ―glacial-interglacial times and the present. The
Quaternary Research, 49, 163-178，2009.（ 川幡穂高・蓑島佳代: 風送塵の地球環境に与える影響―氷期・間氷期，完新世，
現代. 第四紀研究，49，163-178，2009）．

Kawahata H., Minoshima K., Ishizaki Y., Yamaoka K., Gupta L.P., Nagao M. and Kuroyanagi A.: Comparison of settlingparticles and sediments at IMAGES coring site in the northwestern North Pacific ―effect of resuspended particles on
paleorecords―. Sedimentary Geology, 222, 254-262, 2009.

Kawahata H. and Suzuki A.: Ocean acidification and its effect on calcification ―negative feedback system in coral reefs― .
Kaiyo Monthly, 362, 584-587, 2009.（ 川幡穂高・鈴木 淳: 石灰化による海洋酸性化効果―サンゴ礁における負のフィードバッ
ク機構．月刊地球, 362, 584-587，2009）．

Kim Y.-M., Lee S.-M. and Okino K.: Comparison of gravity anomaly between mature and immature intra-oceanic subduction
zones in the western Pacific. Tectonophysics, 474, 657-673, 2009.

Kitada Y., Kawahata H., Suzuki A. and Oomori T.: Environmental pollution by toxic chemicals ―Contamination of pesticides
within coral reefs and adjacent river mouths in the Ryukyu islands. Chishitu News, 656, 39-44, 2009.（北田幸男・川幡
穂高・ 鈴木 淳・大森 保: 危険化学物質による環境汚染，その5―琉球列島サンゴ礁および隣接地域の農薬汚染．地質ニュース，656，39-44, 2009）．
Kuroyanagi A. Kawahata H., Suzuki A., Fujita K. and Irie T.: Impacts of ocean acidification on large benthic foraminifers: Resultsfrom laboratory experiments. Marine Micropaleontology, 73, 190–195, 2009.

Mishima M., Kawahata H., Suzuki A., Inoue M., Okai T. and Omura A.: Reconstruction of Paleoenvironment at 16 ka in the last glacial
period by Faviidae coral collected from Ryukyus, southwestern Japan. Journal of Quaternary Science, 928-936, 2009.
Miyahara H., Yokoyama Y., Yamaguchi Y.T.: Influence of the Schwabe/Hale solar cycles on climate change during the Maunder
Minimum, Solar and Stellar Variability ―Impact on Earth and Planets. Proceedings IAU Symposium, 264, 59-63, 2009.
Moore G.F., Park. J.-O., Bangs N.L., Gulick. S.P., Tobin H.J., Nakamura Y., Sato S., Tsuji T., Yoro T., Tanaka H., Uraki S., Kido

Y., Sanada Y., Kuramoto S. and Taira A.: Structural and seismic stratigraphic framework of the NanTroSEIZE Stage 1
transect. Proceedings of the Integrated Ocean Dorilling Program, 314/315/316, 2009.

Morishita T., Hara K., Nakamura K., Sawaguchi T., Tamura A., Arai S., Okino K., Takai K. and Kumagai H.: Igneous, alteration,and exhumation processes recorded in abyssal peridotites and related fault rocks from an oceanic core complex along
the Central Indian Ridge. Journal of Petrology, 50, 1299-1325, 2009.

Nakamura K., Morishita T., Bach W., Klein F., Hara K., Okino K., Takai K. and Kumagai H.: Serpentinized troctolites exposednear the Kairei Hydrothermal Field, Central Indian Ridge: Insights into the origin of the Kairei hydrothermal fluid
supporting a unique microbial ecosystem. Earth and Planetary Science Letters, 280, 128-136, 2009.

Nakazawa T., Ueno K., Kawahata H., Fujikawa M. and Kashiwagi K.: Facies stacking patterns in high-frequency sequencesinﬂuenced by long-term sea-level change on a Permian Panthalassan oceanic atoll ―An example from the Akiyoshi
Limestone, SW Japan. Sedimentary Geology, 214, 35-48, 2009.

Okino K., Ohara Y., Fujiwara T., Lee S.-M., Koizumi K., Nakamura Y. and Wu S.: Tectonics of the southern tip of the Parece Vela
Basin, Philippine Sea Plate. Tectonophysics, 466, 213-228, 2009.

Park. J.-O., Hori T. and Kaneda Y.: Seismotectonic implications of the Kyushu-Palau ridge subducting beneath the westernmost
Nankai forearc. Earth, Planets and Space, 61, 1013-1018, 2009.

Sato T., Okino K. and Kumagai H.: Magnetic structure of an oceanic core complex at the southernmost Central Indian Ridge―Analysis of shipboard and deep-sea three-component magnetometer data. Geochemistry Geophysics Geosystems, 10,
Q06003, 21pp, 2009.

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Simms A.R., Aryal N., Yokoyama Y., Matsuzaki H. and Dewitt R.: Insights on a proposed mid-Holocene highstand along thenorthwestern Gulf of Mexico from the evolution of small coastal ponds. Journal of Sedimentary Research, 79, 757-772,
2009.

Strasser. M., Moore F.G., Kimura G., Kitamura Y., Kopf. A., Lallemant. S., Park. J.-O., Screaton J.E., Su X., Underwood B.M.
and Zhao X.: Origin and evolution of a splay fault in the Nankai accretionary wedge. Nature Geoscience, 2, 648-652,
2009.

Suzuki A., Endo K. and Kawahata H.: Biomineralization and calcification ―from gene to global environments. Kaiyo Monthly,
362, 581-583, 2009.（ 鈴木 淳・遠藤一佳・川幡穂高: バイオミネラリゼーションと石灰化―遺伝子から地球環境まで. 月刊地球, 362, 581-583, 2009）．
Suzuki A., Tsuoda T. and Kawahata H.: Coral skeletal climatology ―winter monsoon variability and climate regime hift recorded
in a Porites coral from Ishigaki Island. Kaiyo Monthly, 362, 599-603, 2009.（ 鈴木 淳・角田友明・川幡穂高: サンゴ骨格気候学―石垣島のサンゴ記録に見られる冬期モンスーン変動とレジームシフト. 月刊地球, 362, 599-603, 2009）．

Takashima R., Nishi H., Hayashi K., Okada H., Kawahata H., Yamanaka T. and Mampuku M.: Litho-, bio- and chemostratigraphy
across the Cenomanian/Turonian boundary (OAE 2) in the Vocontian Basin of southeastern France. Palaeogeography,
Palaeoclimatology, Palaeoecology, 273, 61-74, 2009.

Takeuchi M., Kawahata H., Gupta L.P., Itouga M., Sakakibara H., Ohta H., Komai T. and Ono Y.: Chemistry of fly ash andcyclone ash leachate from waste materials and effects of ash leachates on bacterial growth, nitrogen-transformation
activity, and metal accumulation. Journal of Hazardous Materials, 165, 967-973, 2009.

Thomas A.L., Henderson G.M., Deschamps P., Yokoyama Y., Mason A.J., Bard E., Hamelin B., Durand N. and Camoin G.:
Penultimate deglacial sea level timing from uranium/thorium dating of Tahitian corals. Science, 324, 1186-1189, 2009.

Tobin H., Kinoshita M., Ashi J., Lallemant S., Kimura G., Screaton E., Thu M.-K., Masago H., Curewitz D. and IODP Expeditions

314/315/316 Scientific Party: NanTroSEIZE Stage 1 expeditions 314, 315, and 316 ―First drilling program of the
Nankai Trough seismogenic zone experiments. Scientific Drilling, 8, 4-17, 2009.

Tsuji T., Park J.-O., Moore G., Kodaira S., Fukao Y., Kuramoto S. and Bangs N.: Intraoceanic thrusts in the Nankai Trough off
the Kii Peninsula ―Implications for intraplate earthquakes. Geophysical Research Letters, 36, L06303, 6pp, 2009.

Uraki S., Kido Y., Sanada Y., Kuramoto S., Okano T., Saga H. Park J.-O., Moore G.F. and Taira A.: Kumano-nada 3D seismic
data acquisition and processing. Geophysical Exploration (BUTSURI-TANSA), 62, 277-288, 2009.
Yamaguchi, Y.T., Chikaraishi, Y., Yokoyama, Y., and Ohkouchi, N. GC/MS analysis of amino acids as ethoxycarbonyl ethyl ester.
Researches in Organic Geochemistry, 25, 71-83, 2009.（山口保彦・力石嘉人・横山祐典・大河内直彦: アミノ酸（エトキシカ
ルボニル／エチルエステル誘導体）のGC/MSによる解析. Researches in Organic Geochemistry, 25, 71-83, 2009.）

Marine Ecosystem Dynamics

Adachi T., Hagihara S., Itoh M., Shinohara G., Hayashi I. and Kojima S.: Genetic population structure and morphologicalcharacters of Japanese psychrolutids of genus Malacocottus (Scorpaeniformes: Psychrolutidae). Ichyological Research,
56, 323-329, 2009.

Baki M.A., Motegi C., Shibata A., Fukuda H., Shimode S. and Kikuchi T.: Temporal changes in chlorophyll a concentrations,bacterial, viral and heterotrophic nanoflagellate abundance in the coastal zone of Sagami Bay, Japan ―implications ofbottom-up and top-down effects. Coastal Marine Science, 33, 29-38, 2009.

Chiura, H.X., Uchiyama N., Kogure K: Broad-host range gene transporter particles produced by Aliivibrio fischeri. Microbes andEnvironments, 24, 322-329. 2009.

Fujikura K., Nishida S. and Shirayama Y.: Census of Marine Life. Bulletin of the Plankton Society of Japan, 56, 131-135, 2009.（ 藤倉克則・西田周平・白山義久: 海洋生物のセンサス. 日本プランクトン学会報, 56, 131-135, 2009.）

Higgins J.L., Kudo I., Nishioka J., Tsuda A. and Whilhelm S.W.: The response of the virus community to the SEEDS II
mesoscale iron fertilization. Deep-Sea Research Part II, 56, 2788-2795, 2009.
Iwamoto Y., Narita Y., Tsuda A. and Uematsu M.: Single particle analysis of oceanic suspended matter during the SEEDS II ironfertilization experiment. Marine Chemistry, 113, 212-218, 2009.

Kameyama S., Tsunogai U., Nakagawa F., Sasakawa M., Komatsu D.D., Ijiri A., Yamaguchi J., Horiguchi T., Kawamura H.,
Yamaguchi A. and Tsuda A.: Enrichment of alkanes within a phytoplankton bloom during an in situ iron enrichment
experiment in the western subarctic Pacific. Marine Chemistry, 115, 92-101, 2009.

Kamiyama T., Yamauchi H., Iwai T. and Hamasaki K.: Seasonal variations in abundance and biomass of picoplankton in an
oyster farming area of northern Japan. Plankton and Benthos Research, 4, 62-71, 2009.

Kataoka T., Suzuki K., Hayakawa M., Kudo I., Higashi S. and Tsuda A.: Temporal changes in community composition ofheterotrophic bacteria during in situ iron enrichment in the western subarctic Pacific (SEEDS-II). Deep-Sea ResearchPart II, 56, 2779-2787, 2009.

Kodama Y. and Kojima S.: The population history of the deep-sea demersal fish Bothrocara hollandi in the Japan Sea revealed
by tandem repeat units in the mitochondrial non-coding region. Plankton and Benthos Research, 4, 115-119, 2009.

Kogure K.: Reevaluation of hyperthemophiles. In:“ Dynamics of Ocean Biosystems 5, Ocean and Life ―Seeking for the view of life formarine organisms”, Tsukamoto K. (eds.), Tokai University Press, pp. 262-277. 2009.（木暮一啓：高熱菌再考. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 塚本勝巳（編）, 東海大学出版会， pp.262-277, 2009.）

Kojima S.: Dispersal and genetic deviation of benthic organisms in the coastal areas around Japan. In:“ Dynamics of Ocean
Biosystems 5, Ocean and Life ―Seeking for the view of life for marine organisms”, Tsukamoto K. (eds.), Tokai University
Press, pp. 141-154, 2009.（小島茂明: 日本沿岸における底生動物の分散と遺伝的分化. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 塚本勝巳（編）, 東海大学出版会，pp.141-154, 2009.）
Kojima S., Moku M. and Kawaguchi K.: Genetic diversity and population structure of three dominant myctophid fishes (Diaphus
theta, Stenobrachius leucopsarus, and S. nannochir) in the North Pacific Ocean. Journal of Oceanography, 65, 187-193,
2009.

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Kojima S., Watanabe H., and Fujikura K.: Estimation of history of hydrothermal activities based on evolutionary ecology ofchemosynthesis-based communities. Journal of Geology, 118, 1174-1185, 2009.（小島茂明・渡部裕美・藤倉克則: 化学合成生物群集の進化生態に基づく熱水活動史の推定. 地学雑誌, 118, 1174-1185, 2009.）

Lizotte M., Levasseur M., Ku I., Suzuki K., Tsuda A., Kiene R.P. and Scarratt M.G.: Iron-induced alterations of bacterial DMSP
metabolism in the western subarctic Pacific during SEEDS-II. Deep-Sea Research Part II, 56, 2889-2898, 2009.

Machida R.J., Hashiguchi Y., Nishida M. and Nishida S.: Zooplankton diversity analysis through single-gene sequencing of acommunity sample. BMC Genomics, 10, 438, 2009.

Morimoto A., Takikawa T., Onitsuka G., Watanabe A., Moku M. and Yanagi T.: Seasonal variation of horizontal material transport
through the eastern channel of the Tsushima Straits. Journal of Oceanography, 65, 61-71, 2009.

Nishida S.: Deep-sea ecosystem: Biodiversity of zooplankton and food web. In:“ Dynamics of Ocean Biosystems 5, Ocean and Life ―Seeking for the view of life for marine organisms”, Tsukamoto K. (eds.), Tokai University Press, pp.338-363, 2009.（西田周平: 深海生態系：動物プランクトンの多様性と食物網. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」,

塚本勝巳（編）, 東海大学出版会，pp.338-363, 2009.）
Nishida S., Fujikura K. and Shirayama Y.: Accomplishments and prospects of the Census of Marine Life ―Towards a synthesisof marine biodiversity information. Bulletin of the Plankton Society of Japan, 56, 129-130, 2009. （西田周平・藤倉克則・白山義久: Census of Marine Lifeの成果と展望―海洋生物多様性情報の総合化に向けて. 日本プランクトン学会報, 56, 129-130,
2009.）

Nishida S., Lindsay D.J. and Machida R.: Census of Marine Zooplankton (CMarZ) ―Accomplishments and prospects. Bulletinof the Plankton Society of Japan, 56, 139-144, 2009.（西田周平・Lindsay D.J.・町田龍二: 全海洋動物プランクトンセンサス（Census of Marine Zooplankton: CMarZ）の成果と展望. 日本プランクトン学会報, 56, 139-144, 2009.）

Nishikawa J., Ngyen Thi Thu, Yusoff F.Md., Lindsay D.J., Mulyadi, Mujiono N., Ohtsuka S. and Nishida S.: Jellyfish fisheries inSoutheast Asia, with special reference to those in Vietnam, Indonesia and Malaysia. Kaiyo Monthly, 41, 401-411, 2009.

（西川 淳・Ngyen Thi Thu・Fatimah Md. Yusoff・Dhugal J. Lindsay・Mulyadi・Nova Mujiono・大塚 攻・西田周平: 東南ア
ジア，特にベトナム，インドネシア，マレーシアにおけるクラゲ漁業. 月刊海洋, 41, 401-411, 2009.）

Ohtsuka S., Koike K., Lindsay D., Nishikawa J., Miyake H., Kawahara M., Mulyadi Mujiono M., Hiromi J. and Komatsu H.:
Symbionts of marine medusae and ctenophores ―a brief review. Plankton and Benthos Research, 4, 1-13, 2009.

Ohtsuka S., Tanimura A., Mahchida R. and Nishida S.: Bipolar and antitropical distribution of planktonic copepods. Fossils, 85,

6-13, 2009.（ 大塚 攻・谷村 篤・町田龍二・西田周平: 浮遊性カイアシ類の両極および反赤道分布について. 化石, 85, 6-13,
2009.）

Onitsuka G., Morimoto A., Takikawa T., Watanabe A., Moku M., Yoshikawa Y. and Yanagi T. : Enhanced chlorophyll associatedwith island-induced cyclonic eddies in the eastern channel of the Tsushima Straits. Estuarine, Coastal and Shelf Science,
81, 401-408, 2009.

Sawabe T., Koizumi S., Fukui Y., Nakagawa S., Ivanova E.P., Kita-Tsukamoto K., Kogure K., Thompson F.L.: Mutation is themain driving force in the diversification of the Vibrio splendidus clade. Microbes and Environments, 24. 281-285. 2009.

Shimode S., Hiroe Y., Hidaka K., Takahashi K. and Tsuda A.: Life history and ontogenetic vertical migration of Neocalanus
gracilis (Dana) in the western North Pacific. Aquatic Biology, 7, 295-306, 2009.
Suzuki K., Saito H., Isada T., Hattori A., Kiyosawa H., Nishioka J., McKay R.M.L., Kuwata A. and Tsuda A.: Community structure

and photosynthetic physiology of phytoplankton in the northwest subarctic Pacific during an in situ iron fertilization
experiment (SEEDS II). Deep-Sea Research Part II, 56, 2733-2744, 2009.

Tada Y., Taniguchi A. and Hamasaki K.: Phylotype-specific productivity of marine bacterial populations in eutrophic seawater,as revealed by bromodeoxyuridine immunocytochemistry combined with fluorescence in situ hybridization. Microbes andEnvironments, 24, 315-321, 2009.

Takagi K., Yatsu A., Itoh H., Moku M. and Nishida H.: Comparison of feeding habits of myctophid fishes and juvenile small
epipelagic fishes in the western North Pacific. Marine Biology, 156, 641-659, 2009.

Tsuda A.: Aquatic ecology. In:“Introduction to Aquatic Life Science”, Aida K. (eds.), pp. 34-48, Kouseisha-kouseikaku, 2009. （津田 敦: 水圏生態系. 「水圏生物科学入門」, 会田勝美（編）, 恒星社厚生閣， pp.34-48, 2009.）

Tsuda A.: Iron fertilization experiment and global environment. In:“ Fe, the Core of Existence through the History of 13.7 Billion
Years”, Miyamoto H. and Tachibana S. (eds.), pp. 103-108, 2009.（津田 敦: 海洋鉄散布と地球環境. 「鉄137億年の宇宙誌」, 宮本英明・橘 省吾（編）, 東京大学総合研究博物館，pp.103-108, 2009.）

Tsuda A., Saito H., Machida R.J. and Shimode S.: Meso- and microzooplankton responses to an in situ iron fertilization
experiment (SEEDS-II) in the northwest subarctic Pacific. Deep-Sea Research Part II, 56, 2767-2778, 2009.

Tsumune D., Nishioka J., Shimamoto A., Watanabe Y.W., Aramaki T., Nojiri Y., Takeda S., Tsuda A. and Tsubono T.: Physicalbehaviors of iron fertilized patch in SEEDS II. Deep-Sea Research Part II, 56, 2948-2957, 2009.
Watanabe H., Kojima S.: Dispersal and speciation of hydrothermal-vent endemic animal groups. In:“ Dynamics of Ocean Biosystems
1, Evolution in the Sea: Molecular Phylogenetic Approaches to the Marine Biodiversity”, Nishida M. (eds.), pp. 244-260,
2009.（渡部裕美・小島茂明: 熱水噴出域固有動物群の分散と種分化.「海洋生命系のダイナミクス1

海洋の生命史―生命は海洋でどう進化したか」, 西田 睦（編）, 東海大学出版会，pp.244-260, 2009.）
Yoshida N., Nishimura M., Inoue K., Yoshizawa S., Kamiya E., Taniguchi A., Hamasaki K. and Kogure K.: Analysis of
nanoplankton community structure using flow sorting and molecular techniques. Microbes and Environments, 24,
297-304, 2009.

Yoshizawa S., Wada M., Kita-Tsukamoto K., Yokota A. and Kogure K.: Photobacterium aquimaris sp. nov., luminous marine
bacteria isolated from seawater. International Journal of Systematic and Evolutionary Microbiology, 59, 1438-1442,
2009.

Yoshizawa S., Wada M., Kita-Tsukamoto K., Yokota A. and Kogure K.: Vibrio azureus sp. nov, a luminous marine bacterium
isolated from seawater. International Journal of Systematic and Evolutionary Microbiology, 59, 1645-1649, 2009.

ATMOSPHERE AND OCEAN RESEARCH INSTITUTE
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Marine Bioscience

Aoyama J.: Spawning areas of anguillid eels in the world. In:“ Eels at the Edge, 58”, Casselman J. and Cairns D. (eds.), American
Fisheries Society, pp.847-849, 2009.

Aoyama J.: Life history and evolution of migration in catadromous eels (Genus Anguilla). Aqua-BioScience Monograph, 2, 1-42,
2009.

Aoyama J.: Molecular phylogeny and evolution of eel migration. In:“ Dynamics of Ocean Biosystems 1, Evolution in the Sea ―Molecular Phylogenetic Approaches to the Marine Biodiversity”, Nishida M. (eds.), Tokai University Press, pp.341-358,
2009.（青山 潤: ウナギの系統と大回遊の謎. 「海洋生命系のダイナミクス1

海洋の生命史―生命は海洋でどう進化したか」,西田 睦（編）, 東海大学出版会，pp.341-358, 2009.）
Boisnier E., Sagawa T., Komatsu T., Takagi N., Katayama M. and Katayama T.: A habitat association index to distinguishresident species. Community Ecology, 10, 165-172, 2009.
Chow S., Kurogi H., Mochioka N., Kaji S., Okazaki M. and Tsukamoto K.: Discovery of mature freshwater eels in the open
ocean. Fisheries Science, 75, 257-259, 2009.

Filippi B., Komatsu T. and Tanaka K.: Simulation of drifting seaweeds in East China Sea. Ecological Informatics, 5, 67-72, 2010
(published online 2009).

Fukuda N., Kuroki M., Shinoda A., Yamada Y., Okamura A., Aoyama J. and Tsukamoto K.: Influence of water temperatureand feeding regime on otolith growth in Anguilla japonica glass eels and elvers ―does otolith growth cease at low
temperatures? Journal of Fish Biology, 74, 1915-1933, 2009.

Gagnaire P.A., Minegishi Y., Aoyama J., Réveillac E., Robinet T., Bosc P., Tsukamoto K., Feunteun E. and Berrebe P.: Ocean
currents drive secondary contact between Anguilla marmorata populations in the Indian Ocean. Marine Ecology Progress
Series, 379, 267-278, 2009.

Hanashima A., Kubokawa K. and Kimura S.: Structure of the amphioxus nebulin gene and evolution of the nebulin family genes.
Gene, 443, 76-82, 2009.

Hanashima A., Kubokawa K. and Kimura S.: Characterization of amphioxus nebulin and similarity to the human nebulin. Journalof Experimental Biology, 212, 668-672, 2009.
Hashiguchi Y. and Nishida M.: Screening the V2R-type putative odorant receptor gene repertoire in bitterling Tanakia lanceolata.
Gene, 441, 74-79, 2009.

Hyodo S., Kakumura K., Takabe S., Yamaguchi Y.: Promotion of cartilaginous fish research through the international collaborations
with researchers in Australia and Hawaii. Kaiyo Monthly, 52, 149-158, 2009.（兵藤 晋・角村佳吾・高部宗一郎・山口陽子:
オーストラリア・ハワイとの共同研究をとおした新たな軟骨魚類研究の推進. 月刊海洋, 号外52, 149-158, 2009.）

Iida M., Watabane S. and Tsukamoto K.: Life history traits of the temperate amphidromous goby Sicyopterus japonicus andits relatives, compared with other amphidromous fishes. In:“ Challenges for Diadromous Fishes in a Dynamic Global
Environment, 69”, Haro A. et al. (eds.), American Fisheries Society, pp.355-373, 2009.

Inoue J.G., Kumazawa Y., Miya M. and Nishida M.: The historical biogeography of the freshwater knifefishes using mitogenomic
approaches: A Mesozoic origin of the Asian notopterids (Actinopterygii: Osteoglossomorpha). Molecular Phylogenetics andEvolution, 51, 486-499, 2009.

Ishizaki D., Otake T., Sato T., Yodo T., Yoshioka M. and Kashiwagi M.: Use of otolith microchemistry to estimatethe migratory
history of Japanese dace Tribolodon hakonensis in the Kamo River, Mie Prefecture. Nippon Suisan Gakkaishi, 75,
419-424, 2009.（石崎大介・大竹二雄・佐藤達也・淀 大我・吉岡 基・柏木正章: 耳石微量元素分析を用いた三重県加茂川におけるウグイの回遊履歴の推定. 日本水産学会誌, 75, 419-424, 2009.）
Johnson G.D., Paxton J.R., Sutton T.T., Satoh T.P., Sado T., Nishida M. and Miya M.: Deep-sea mystery solved ―astonishinglarval transformations and extreme sexual dimorphism unite three fish families. Biology Letters, 5, 235-239, 2009.

Kakioka R., Watanabe K., Takeshima H. and Nishida M.: Isolation and characterization of 12 microsatellite loci for crossspecies amplification in the cyprinid gudgeons Squalidus chankaensis and S. japonicus. Molecular Ecology Resources, 9,1141-1144, 2009.

Kakumura K., Watanabe S., Bell J.D., Donald J.A., Toop T., Kaneko T. and Hyodo S.: Multiple urea transporter proteins in the kidneyof holocephalan elephant fish (Callorhinchus milii). Comparative Biochemistry and Physiology B, 154, 239-247, 2009.
Kato A., Yoshioka A. and Sato K.: Foraging behaviour of Adélie penguins during incubation period in Lützow -Holm Bay. Polar
Biology, 32, 181-186, 2009.

Kawabe R., Yoshiura N., Nashimoto K., Tsuda Y., Kojima T., Takagi T., Yasuda T., Kato A., Sato K. and Naito Y.: High-frequency
depth recording reveals the vertical movement of flounder in the Tsugaru Strait of northern Japan. Marine andFreshwater Behaviour and Physiology, 42, 275-295, 2009.

Kawaguchi M., Fujita H., Yoshizaki N., Hiroi J., Okouchi H., Nagakura Y., Noda T., Watanabe S., Katayama S., Iwamuro S.,
Nishida M., Iuchi I. and Yasumasu S.: Different hatching strategies in embryos of two species, pacific herring Clupea

pallasii and Japanese anchovy Engraulis japonicus, that belong to the same order Clupeiformes, and their environmental
adaptation. Journal of Experimental Zoology, Part B: Molecular and Developmental Evolution, 312B, 95-107, 2009.

Kawahara R., Miya M., Mabuchi K., Near T.J. and Nishida M.: Stickleback phylogenies resolved: Evidence from mitochondrial
genomes and 11 nuclear genes. Molecular Phylogenetics and Evolution, 50, 401-404, 2009.

Kawatsu S., Sato K., Watanabe Y., Hyodo S., Breves J.P., Fox B.K., Grau E.G, and Miyazaki N.: A new method to calibrateattachment angles of data loggers in swimming sharks. Kaiyo Monthly, 52, 129-138, 2009.（河津静花・佐藤克文・渡辺佑
基・兵藤 晋・Breves J.P.・Fox B.K.・Grau E.G.・宮崎信之: 加速度データロガーの角度補正に関する新手法の検討. 月刊海洋,52, 129-138, 2009.）
Komaru A., Onouchi K., Yanase Y., Narita T. and Otake T.: Shell strontium/calcium ratios of Corbicula japonica collected frombrackish area with different salinity. Nippon Suisan Gakkaishi, 75, 443-450, 2009.（古丸 明・尾之内健次・柳瀬泰宏・成田光好・大竹二雄: EPMA（Electron Probe Micro Analyzer）による塩分濃度の異なる水域で採集されたヤマトシジミ貝殻のSr/Ca比. 日本水産学会誌, 75, 443-450, 2009.）

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研究業績｜ PUBLICATION LIST

Komatsu, T., Sagawa T., Rhomdhane H.B., Fukuda M., Boisnier E., Ishida K., Belsher T., Sakanishi Y., M. Ibrahim Seeni Mohd,
Ahmad S., Lanuru M., Mustapha K.B. and Hattour A.: Utilization of ALOS AVNIR-2 data for mapping coastal habitats―examples of seagrass beds from boreal to tropical waters. Proceeding of ALOS PI 2008 Symposium, Island of Rhodes,
Greece, 3-7 November 2008, European Space Agency, SP-664, 2009.

Komatsu T., Mikami A., Ajisaka T., Uwai S., Aoki M., Tanaka K., Fukuda M., Kkubu Y., Tanaka K., Michida Y. and Sugimoto T.:
Ecological characteristics of drifting seaweed rafts composed of Sargassum species. Coastal Oceanography Research,46, 127-136, 2009.（小松輝久・三上温子・鯵坂哲朗・上井進也・青木優和・田中克彦・福田正浩・國分優孝・田中 潔・道田豊・杉本隆成: ホンダワラ類流れ藻の生態学的特徴. 沿岸海洋研究, 46, 127-136, 2009.）
Konno N., Hyodo S., Yamaguchi Y., Kaiya H., Miyazato M., Matsuda K. and Uchiyama M.: African lungfish (Protopterus
annectens) possess an arginine vasotocin receptor homologous to the tetrapod V2-type receptor. Journal of Experimental
Biology, 212, 2183-2193, 2009.

Kubokawa K.: Evolution of chordates from amphioxus to vertebrates. In:“ Dynamics of Ocean Biosystems 1, Evolution in the Sea:
Molecular Phylogenetic Approaches to the Marine Biodiversity”, Nishida M. (eds.), Tokai University Press, pp.182-195,2009.（窪川かおる: ナメクジウオにみる脊椎動物の出現. 「海洋生命系のダイナミクス1

海洋の生命史―生命は海洋でどう進化したか」, 西田 睦（編）, 東海大学出版会，pp.182-195, 2009.）
Kuroki M., Aoyama J., Kim H., Miller M.J., Kimura S. and Tsukamoto K.: Migration scales of catadromous eels ―diversity andevolution of larval migration based on their distribution, morphology and early life history. In:“Challenges for DiadromousFishes in a Dynamic Global Environment. American Fisheries Society, Symposium, 69”, Haro A., Smith K.L., Rulifson R.A.,

Moffitt C.M., Klauda R.J., Dadswell M.J., Cunjak R.A.,, Cooper J.E., Beal K.L., and Avery T.S. (eds.), the American
Fisheries Society, pp.887-889, 2009.
Kuroki M., Aoyama J., Miller M.J., Yoshinaga T., Shinoda A., Hagihara S. and Tsukamoto K.: Sympatric spawning of Anguilla
marmorata and Anguilla japonica in the western North Pacific Ocean. Journal of Fish Biology, 74, 1853-1865, 2009.
Kusakabe M., Zuccarelli M.D., Nakamura I. and Young G.: Steroidogenic acute regulatory protein in white sturgeon (Acipenser
transmontanus) ―cDNA cloning, sites of expression and transcript abundance in corticosteroidogenic tissue after anacute stressor. General and Comparative Endocrinology, 162, 233-240, 2009.

Lavoué S., Miya M. and Nishida M.: Mitochondrial phylogenomics of anchovies (family Engraulidae) and recurrent origins ofpronounced miniaturization in the order Clupeiformes. Molecular Phylogenetics and Evolution, 56, 480-486, 2010
(published online 2009).

Loretz C.A., Pollina C., Hyodo S. and Takei Y.: Extracellular calcium-sensing receptor expression in osmoregulatory andendocrine tissues of the tilapia. General and Comparative Endocrinology, 161, 216-228, 2009.

Mabuchi, K.: The history of the Japanese reef fish community: Ichthyofaunal exchanges among Pacific coastal regions revealed
by molecular phylogenies. In:“Dynamics of Ocean Biosystems 1, Evolution in the Sea ―Molecular Phylogenetic Approaches tothe Marine Biodiversity”, Nishida, M. (eds.), Tokai University Press, pp. 359-375, 2009.（ 馬渕浩司: 日本の磯魚群集の形

成史：分子系統が語る浅海の交流史 「海洋生命系のダイナミクス1

海洋の生命史―生命は海でどのように進化したか」, 西田 睦（編）, 東海大学出版会, pp. 359-375, 2009.）
Maeda K., Takeda M., Kamiya K., Aibara M., Mzighani S.I., Nishida M., Mizoiri S., Sato T., Terai Y., Okada N. and Tachida
H.: Population structure of two closely related pelagic cichlids in Lake Victoria, Haplochromis pyrrhocephalus and H.
laparogramma. Gene, 441, 67-73, 2009.

Matsumoto S., Kon T., Yamaguchi M., Takeshima H., Yamazaki Y., Mukai T., Kuriiwa K., Kohda M. and Nishida M.: Cryptic
diversification of the swamp eel Monopterus albus in East and Southeast Asia, with special reference to the Ryukyuan
populations. Ichthyological Research, 57, 71-77, 2009.

Matsuzaki S.S., Mabuchi K., Takamura N., Nishida M. and Washitani I.: Behavioral and morphological differences between feraland domesticated strains of common carp. Journal of Fish Biology, 75, 1206-1220, 2009.

Mayden R.L., Chen W.J., Bart H.L., Doosey M.H., Simons A.M., Tang K.L., Wood R.M., Agnew M.K., Yang L., Hirt M.V.,
Clements M.D., Saitoh K., Sado T., Miya M. and Nishida M.: Reconstructing the phylogenetic relationships of theearth's most diverse clade of freshwater fishes ―Order Cypriniformes (Actinopterygii: Ostariophysi): A case ctudy
using multiple nuclear loci and the mitochondrial genome. Molecular Phylogenetics and Evolution, 51, 500 -514,
2009.

Meguro Y., Takahashi H., Takeshima H., Nishida M. and Goto A.: Isolation and characterization of 13 microsatellite loci inthe nine-spined stickleback (Pungitius pungitius) and cross-species amplification in 5 stickleback species (family
Gasterosteidae). Conservation Genetics Resources, 1, 31-34, 2009.

Miller M.J.: Ecology of anguilliform leptocephali: remarkable transparent fish larvae of the ocean surface layer. Aqua-BioSci
Monographs, 2, 1-94. 2009

Miller M.J., Aoyama J. and Tsukamoto K.: New perspectives on the early life history of tropical anguillid eels ―Implications for
management. In:“ Eels at the Edge. American Fisheries Society, Symposium 58”, Casselman J. and Cairns D.(eds.),
American Fisheries Society, pp.71-84, 2009.

Miller M.J., Kimura S., Friedland K.D., Knights B., Kim H., Jellyman D.J. and Tsukamoto K.: Review of ocean-atmosphericfactors in the Atlantic and Pacific oceans influencing spawning and recruitment of anguillid eels. In:“Challenges for
Diadromous Fishes in a Dynamic Global Environment. American Fisheries Society, Symposium, 69”, Haro, A., Smith K.L.,
Rulifson R.A., Moffitt C.M., Klauda R.J., Dadswell M.J., Cunjak R.A.,, Cooper J.E., Beal K.L., and Avery T.S.(eds.),
American Fisheries Society, pp.231-249, 2009.
Miller M.J., Powell J. and Tsukamoto K.: Observation of a large metamorphosing leptocephalus in coral reef habitat of Sangeang
Island, Indonesia. Zoological Studies, 48, 107, 2009.

Minegishi Y., Aoyama J., Inoue J.G., Azanza R.V. and Tsukamoto K.: Inter- specific and subspecific genetic divergences offreshwater eels, genus Anguilla including a recently described species, A. luzonensis, based on whole mitochondrial
genome sequences. Coastal Marine Science, 33, 64-77, 2009.

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Mitani Y., Andrews R.D., Sato K., Kato A., Naito Y. and Costa D.P.: Three-dimensional resting behaviour of northern elephantseals: drifting like a falling leaf. Biology Letters, 6, 163-166, 2010 (published online 2009).

Miyazaki J., Higa R., Toki T., Ashi J., Tsunogai U., Nunoura T., Imachi H. and Takai K.: Molecular characterization of potential
nitrogen fixation by anaerobic methane-oxidizing archaea in the methane seep sediments at the number 8 Kumano
Knoll in the Kumano Basin, offshore of Japan. Applied and Environmental Microbiology, 75, 7153-7162, 2009.

Morita M., Futami K., Zhang H., Kubokawa K., Ojima Y. and Okamoto N.: Evolutionary analysis of amhioxus myc gene. Journalof the Tokyo University of Marine Science and Technology, 5, 11-16, 2009.
Mukai T., Nakamura S. and Nishida M.: Genetic population structure of a reef goby, Bathygobius cocosensis, in the northwestern
Pacific. Ichthyological Research, 56, 380-387, 2009.

Nakamura I., Kusakabe M., Young G.: Differential suppressive effects of low physiological doses of estradiol-17beta in vivo onlevels of mRNAs encoding steroidogenic acute regulatory protein and three steroidogenic enzymes in previtellogenic
ovarian follicles of rainbow trout. General and Comparative Endocrinology, 163, 318-323, 2009.

Narazaki T., Sato K., Abernathy K.J., Marshall G.J. and Miyazaki N.: Sea turtles compensate deflection of heading at the sea
surface during directional travel. Journal of Experimental Biology, 212, 4019-4026, 2009.

Nishida M. (eds.):“ Dynamics of Ocean Biosystems 1, Evolution in the Sea ―Molecular Phylogenetic Approaches to the Marine
Biodiversity”, Tokai University Press, 420pp, 2009.（西田 睦（編）:「海洋生命系のダイナミクス1 海洋の生命史―生命は海でどのように進化したか」, 東海大学出版会, 420pp, 2009.）

Nishida M. and Tachihara K.: Rivers in Okinawa. In:“ Rivers in Japan”, Ogura N., Shimatani Y. and Tanida K. (eds.), Asakura
Publishing, pp.154-157, 2009.（西田 睦・立原一憲: 沖縄の川. 「図説日本の河川」, 小倉紀雄・島谷幸宏・谷田一三（編）,朝倉書店，pp.154-157, 2009.）
Nishikawa U., Yonekura R., Iwasaki K., Nishida M., Kawamura K. and Kawai H.: Molecular approaches to the study of biologicalinvasions: applicability to ecosystem management. Japanese Journal of Ecology, 59, 161-166, 2009.（西川 潮・米倉竜次・

岩崎敬二・西田 睦・河村功一・川井浩史: 分子遺伝マーカーを用いて外来生物の侵入生態を探る―生態系管理への適用可能性.
日本生態学会誌, 59, 161-166, 2009.）

Okamura A., Oka H.P., Horie N., Utoh T., Yamada Y., Mikawa N., Tanaka S. and Tsukamoto K.: Assessing sexual maturity offeminized Japanese eel Anguilla japonica by measuring eye size. Aquaculture International, 17, 91-99, 2009.

Okamura A., Yamada Y., Horie N., Mikawa N., Utoh T., Tanaka S. and Tsukamoto K.: Toxicity and antibacterial activity of silver
ions in the rearing water of Japanese eel eggs and larvae. Nippon Suisan Gakkaishi, 75. 786-792, 2009.（岡村明浩・山田祥朗・堀江則行・三河直美・宇藤朋子・田中 悟・塚本勝巳: ウナギ卵・仔魚の飼育における銀イオンの添加―毒性と抗菌作用.
日本水産学会誌, 75, 786-792, 2009.）

Okamura A., Yamada Y., Horita T., Horie N., Mikawa N., Utoh T., Tanaka S. and Tsukamoto K.: Short communication rearing eel
leptocephali (Anguilla japonica Temminck & Schlegel) in a planktonkreisel. Aquaculture Research, 40, 509-512, 2009.

Okamura A., Yamada Y., Mikawa N., Horie N., Utoh T., Kaneko T., Tanaka S. and Tsukamoto K.: Growth and survival of eel
leptocephali (Anguilla japonica) in low-salinity wate. Aquaculture, 296, 367-372, 2009.
Otsubo H., Hyodo S., Hashimoto H., Kawasaki M., Suzuki H., Saito T., Ohbuchi T., Yokoyama T., Fujihara H., MatsumotoT., Takei Y. and Ueta Y.: Centrally administered adrenomedullin 5 activates oxytocin-secreting neurons in the
hypothalamus with elevation of plasma oxytocin level in rats. Journal of Endocrinology, 202, 237-247, 2009.

Poulsen J.Y., Moller P.R., Lavoue S., Miya M., Knudsens W. and Nishida M.: Higher and lower-level relationships of the deepsea fish order Alepocephaliformes (Teleostei: Otocephala) inferred from whole mitogenome sequences. Biological
Journal of Linnean Society, 98, 923-936, 2009.

Quang D.L., Shirai K., Nguyen D.C., Miyazaki N. and Arai T.: Heavy metals in a tropical eel Anguilla marmorata from the central
part of Vietnam. Water Air Soil Pollution, 204: 69-78, 2009.
Sakamoto K.Q., Sato K., Ishizuka M., Watanuki Y., Takahashi A., Daunt F. and Wanless S.: Can ethograms be automaticallygenerated using body acceleration data from free-ranging birds? PLoS ONE, 4, e5379, 2009.

Sakamoto K.Q., Sato K., Kato A., Fukui D., Bando G., Naito Y., Habara Y., Ishizuka M. and Fujita S.: Metabolic alkalosis due
to feeding chicks in breeding Adélie penguins Pygoscelis adeliae under natural conditions. Physiological and Biochemical
Zoology, 83, 232-238, 2010 (published online 2009).

Sakamoto K.Q., Sato K., Naito Y., Habara Y., Ishizuka M. and Fujita S.: Morphological features and blood parameters of Weddell
seal (Leptonychotes weddellii) mothers and pups during the breeding season. Journal of Veterinary Medical Science, 71,
341-344, 2009.

Sato K. : Teaching behavior of Weddell seal mothers. In:“ Bio-Logging Science ―New approach to investigate wild animals”,
Japanese Society for Bio-Logging Science (eds.), Kyoto Tsushin Sya, pp. 52-54, 2009.（佐藤克文: アザラシは教育ママ.
「動物達の不思議に迫る―バイオロギング」, 日本バイオロギング研究会（編）, 京都通信社，pp.52-54, 2009.）
Sato K., Sakamoto K.Q., Watanuki Y., Takahashi A., Katsumata N., Bost C.-A and Weimerskirch H.: Scaling of soaring seabirds
and implications for flight abilities of giant pterosaurs. PLoS ONE, 4, e5400, 2009.

Sato K., Shiomi K., Watanabe Y., Watanuki Y., Takahashi A. and Ponganis P.J.: Scaling of swim speed and stroke frequency
in geometrically similar penguins ―they swim optimally to minimize cost of transport. Proceedings of the Royal Society
London B, 277, 707-714, 2010 (published online 2009).

Sato Y. and Nishida M.: Whole genome duplication and the evolution of fishes. Japanese Journal of Ichthyology, 56, 89-109,
2009.（佐藤行人・西田 睦: 全ゲノム重複と魚類の進化. 魚類学雑誌, 56, 89-109, 2009.）

Sato Y., Hashiguchi Y. and Nishida M.: Temporal pattern of loss/persistence of duplicate genes involved in signal transduction
and metabolic pathways after teleost-specific genome duplication. BMC Evolutionary Biology, 9, 127, 2009.

Sato Y., Hashiguchi Y. and Nishida M.: Evolution of multiple phosphodiesterase isoforms in stickleback involved in cAMP signaltransduction pathway. BMC Systems Biology, 3, 23, 2009.
Sato Y. and Nishida M.: Electric charge divergence in proteins: insights into the evolution of their three-dimensional properties.
Gene, 441, 3-11, 2009.

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Setiamarga D.H.E., Miya M., Yamanoue Y., Azuma Y., Inoue J.G., Ishiguro N.B., Mabuchi K. and Nishida M.: Divergence timeof the two regional medaka populations in Japan as a new time scale for comparative genomics of vertebrates. Biology
Letters, 5, 812-816, 2009.

Tait L.W., Simpson C.W.C., Takei Y. and Forster M.E: Hagfish natriuretic peptide changes urine flow rates and vascular tensions
in a hagfish. Comparative Biochemistry and Physiology, 150C, 45-49, 2009.

Takada M., Tachihara K. and Nishida M.: Simple and easy method using multiplex PCR for distinguishing between Ryukyuan
domestic and introduced Carassius auratus. Fish Genetics and Breeding Science, 39, 109-114, 2009.（高田未来美・立原一憲・西田 睦: Multiplex PCRを用いた琉球列島在来フナと移殖フナの簡易判別法. 水産育種, 39, 109-114, 2009.）

Takei Y.: Life and water. In:“ Dynamics of Ocean Biosystems 5, Ocean and Life ―Seeking for the view of life for marine organisms”.
Tsukamoto K.(eds.), Tokai University Press, pp. 156-170, 2009.（竹井祥郎: 生命と水. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 塚本勝己（編）, 東海大学出版会, pp.156-170, 2009.）
Takei Y. and Balment R.J.: The neuroendocrine regulation of fluid intake and fluid balance. In:“Fish Physiology. Vol. 28: Fish
Neuroendocrinology”, Bernier N. et al. (eds.), Academic Press, pp.365-419, 2009.

Takei Y., Ogoshi M., Wong M.K. and Nobata S.: Molecular and functional evolution of the adrenomedullin family in vertebrates―What do fish studies tell us? In:“ The Calcitonin Gene-Related Peptide Family ―Form, Function and Future Perspectives”,
Hay D.L. and Dickerson I. (eds.), Springer Verlag, pp.1-21, 2009.

Takeshima H., Iguchi K. and Nishida M.: Ayu (Plecoglossus altivelis) at a contact zone between amphidromous and landlocked
forms ―genetic analyses of populations in the Yodo River system. Zoological Science, 26, 536-542, 2009.

Tando Y. and Kubokawa K: Expression of the gene for ancestral glycoprotein hormone β subunit in the nerve cord ofamphioxus. General and Comparative Endocrinology, 162, 329-339, 2009.
Tando Y. and Kubokawa K.: A homolog of the vertebrate thyrostimulin glycoprotein hormone α subunit (GPA2) is expressed inamphioxus neurons. Zoological Science, 26, 409-414, 2009.
Tsukamoto K.: Oceanic migration and spawning of anguillid eels. Journal of Fish Biology, 74, 1833-1852, 2009.

Tsukamoto K.: View of life for marine organisms has been obtained? For an epilogue. In:“ Dynamics of Ocean Biosystems 5, Ocean
and Life ―Seeking for the view of life for marine organisms”, Tsukamoto K.(eds.), Tokai University Press, pp.487-495,
2009.（塚本勝巳: 「海の生命観」は得られたか？ ―あとがきにかえて. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 塚本勝巳（編）, 東海大学出版会, pp.487-495, 2009.
Tsukamoto K., Aoyama J. and Miller M.J.: Present status of the Japanese eel Anguilla japonica: resources and recent research.
In:“Eels at the Edge, 58”, Casselman J. and Cairns D. (eds.), American Fisheries Society, Maryland, USA, pp.21-35,
2009.

Tsukamoto K., Miller M.J., Kotake A., Aoyama J. and Uchida K.: The origin of fish migration: the random escapement hypothesis.
In:“Challenges for Diadromous Fishes in a Dynamic Global Environment, 69”, Haro. A. et al. (eds.), American Fisheries
Society, Maryland, USA, pp.45-61, 2009.

Tsukamoto K. and Sato K.: Ecology of aquatic animals. In:“ Introduction to Aquatic Biology”, Aida K. (eds.), Kouseisya-

Kouseikaku, pp.66-81, 2009.（塚本勝巳・佐藤克文: 水圏動物の生態. 「水圏生物科学入門」, 会田勝美（編）, 恒星社厚生閣,
東京, pp.66-81, 2009.）

Tsukamoto K., Yamada Y., Okamura A., Kaneko T., Tanaka H., Miller M.J., Horie N., Mikawa N., Utoh T. and Tanaka S.: Positive
buoyancy in eel leptocephali: an adaptation for life in the ocean surface layer. Marine Biology, 156, 835-846, 2009.

Umezawa Y., Komatsu T., Yamamuro M. and Koike I.: Physical and topographic factors affecting suspended particulate mattercomposition in a shallow tropical estuary. Marine Environmental Research, 68, 59-70, 2009.
Valade P., Lord C., Grondin H., Bosc P., Taillebois L., Iida M., Tsukamoto K. and Keith P.: Early life history and description oflarval stages of an amphidromous goby, Sicyopterus lagocephalus (Gobioidei: Sicydiinae). Cybium, 33, 309-319, 2009.

Watanabe S., Aoyama J. and Tsukamoto K.: A new species of freshwater eel Anguilla luzonensis (Teleostei: Anguillidae) from
Luzon Island of the Philippines. Fisheries Science, 75, 387-392, 2009.

Watanabe T., Inoue K. and Takei Y.: Identification of angiotensinogen genes with unique and variable angiotensin sequences inchondrichthyans. General and Comparative Endocrinology, 161, 115-122, 2009.
Watanabe Y., Lydersen C., Sato K., Naito Y., Miyazaki N. and Kovacs K.M.: Diving behavior and swimming style of nursing
bearded seal pups. Marine Ecology Progress Seriese, 380, 287-294, 2009.

Weimerskirch H., Shaffer S.A., Tremblay Y., Costa D.P., Gadenne H., Kato A. Ropert-Coudert Y., Sato K. and Aurioles D.:

Species- and sex-specific differences in foraging behaviour and foraging zones in blue-footed and brown boobies in the
Gulf of California. Marine Ecology Progress Seriese, 391, 267-278, 2009.

Wong M.K.S. and Takei Y.: Cyclostome and chondrichthyan adrenomedullins reveal ancestral features of the adrenomedullinfamily. Comparative Biochemistry and Physiology, 154B, 317-325, 2009.

Wouthuyzen S., Aoyama J., Sugeha Y.H., Miller M.J., Kuroki M., Minegishi Y., Suharti S. and Tsukamoto K.: Seasonality of
spawning by tropical anguillid eels around Sulawesi Island, Indonesia. Naturwissenshaften, 96, 153-158, 2009.

Yagishita N., Miya M., Yamanoue Y., Shirai S.M., Nakayama K., Suzuki N., Satoh T.P., Mabuchi K., Nishida M. and Nakabo T.:
Mitogenomic evaluation of the unique facial nerve pattern as a phylogenetic marker within the percifom fishes (Teleostei:
Percomorpha). Molecular Phylogenetics and Evolution, 53, 258-266, 2009.

Yamada Y., Okamura A., Mikawa N., Utoh T., Horie N., Tanaka S., Miller M.J. and Tsukamoto K.: Ontogenetic changes inphototactic behavior during metamorphosis of artificially reared Japanese eel Anguilla japonica larvae. Marine Ecology
Progress Series, 379, 241-251, 2009.

Yamaguchi Y., Takaki S. and Hyodo S.: Subcellular distribution of urea transporter in the collecting tubule of shark kidney isdependent on environmental salinity. Journal of Experimental Zoology, 311A, 705-718, 2009.

Yamanoue Y., Miya M., Matsuura K., Miyazawa S., Tsukamoto N., Doi H., Takahashi H., Mabuchi K., Nishida M. and Sakai H.:
Explosive speciation of Takifugu ―another use of fugu as a model system for evolutionary biology. Molecular Biology
and Evolution, 26, 623-629, 2009.

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Yamanoue Y., Miya M., Matsuura K., Sakai H., Katoh M. and Nishida M.: Unique patterns of pelvic fin evolution ―a casestudy of balistoid fishes (Pisces: Tetraodontiformes) based on whole mitochondrial genome sequences. MolecularPhylogenetics and Evolution, 50, 179-189, 2009.

Yokouchi K., Aoyama J., Miller M.J., McCarthy T.K. and Tsukamoto K.: Depth distribution and biological characteristics of theEuropean eel (Anguilla anguilla) in Lough Ennell, Ireland. Journal of Fish Biology, 74, 857-871, 2009.

Yokouchi K., Sudo R., Kaifu K., Aoyama J. and Tsukamoto K.: Biological characteristics of silver-phase Japanese eels, Anguillajaponica, collected from Hamana Lake, Japan. Coastal Marine Science, 33, 54-63, 2009.
Watanabe S., Miller M.J., Aoyama J. and Tsukamoto K.: Morphological and meristic evaluation of the population structure ofAnguilla marmorata across its range. Journal of Fish Biology, 74, 2069-2093, 2009.

Living Marine Resources

Chimura M., Watanabe Y., Okouchi H., Shirafuji N. and Kawamura T.: Hatch-period-dependent early growth and survival ofPacific herring Clupea pallasii in Miyako Bay, Japan. Journal of Fish Biology, 74, 604-620, 2009.

Furuya, K and Yasuda, I.: Aquatic Environment, In“Introduction to Aquatic Bioligical Science”, Aida K. (eds.), Koseisha-Koseikaku,
pp.1-29, 2009.（安田一郎: 水圏の環境. 「水圏生物科学入門」, 会田勝美（編）, 恒星社恒星閣, pp.1-29, 2009.）

Hayakawa J., Kawamura T., Ohashi S., Horii T. and Watanabe Y.: The settlement cues of an articulated coralline alga
Marginisporum crassissima for the Japanese top shell Turbo cornutus. Journal of Shellfish Research, 28, 569-575,
2009.

Hayakawa J., Kawamura T., Ohashi S., Horii T. and Watanabe Y.: Early life ecology of the top shell, Turbo cornutus, in relation tocoralline algal turfs. Proceedings of the 5th World Fisheries Congress, CD-ROM, 2009.

Hayakawa J., Kawamura T. and Watanabe Y.: Relationships among long-term fluctuations in the abalone and turban snail, global
climate change, and macro-algal communities. Bulletin of the Japanese Society of Fisheries Oceanography, 73, 323-325,
2009.（早川 淳・河村知彦・渡邊良朗: アワビ類およびサザエ資源の長期変動と大規模気候変動および海藻群落との関係について. 水産海洋研究, 73, 323-325, 2009.）
Hiramatsu K.: Evaluation of the reliability of VPA used for stock assessment for the Pacific stock of Japanese sardine. Nippon
Suisan Gakkaishi, 75, 661-665,2009.（平松一彦: マイワシ太平洋系群の資源評価に用いられるVPAの信頼性の検討. 日本水産学会誌, 75, 661-665, 2009.）

Ikeya T., Horimoto N. and Kashino Y.: A practical method for sensitive determination of the fluorescent water-tracer uranine byreversed phase HPLC under alkaline conditions. Talanta, 79, 818-823, 2009.

Itoh S., Yasuda I., Nishikawa H., Sasaki H. and Sasai Y.: Transport and environmental temperature variability of eggs and larvaeof the Japanese anchovy (Engraulis japonicus) and Japanese sardine (Sardinops melanostictus) in the western North
Pacific estimated via numerical particle tracking experiments. Fisheries Oceanography, 18, 118-133, 2009.

Kanaji Y., Watanabe Y., Kawamura T., Xie S., Yamashita Y., Sassa C. and Tsukamoto Y.: Multiple cohorts of juvenile jackmackerel Trachurus japonicus in waters along. Fisheries Research, 95, 139-145, 2009.
Kawamura T., Onitsuka T., Fukazawa H., Takami H. and Horii T.: Maturation and spawning processes of abalone ―strategies
for successful fertilization, larval and post-larval survival. Proceedings of the 5th World Fisheries Congress, CD-ROM,
2009.

Kitagawa T.: Sensitive Pacific bluefin tuna to water temperature. In:“ Bio-Logging Science ―New approach to investigate wild
animals”, Japanese Society for Bio-Logging Science (eds.), Kyoto Tsushin Sya, pp.52-54, 2009.（北川貴士: クロマグロ
は水温変化に敏感だった. 「バイオロギング」, 日本バイオロギング研究会（編）, 京都通信社, pp.108-111, 2009.）

Kitagawa T.: Light-based geolocation dataloggers. In:“ Bio-Logging Science ― New approach to investigate wild animals”, JapaneseSociety for Bio-Logging Science (eds.), Kyoto Tsushin Sya, pp.52-54, 2009.（北川貴士: 照度センサ付きデータロガー.
「バイオロギング」, 日本バイオロギング研究会 （編）, 京都通信社, pp.116, 2009.）
Kitagawa T.: Studies on the behavioral ecology and thermal adaptation of Pacific bluefin tuna in Japanese waters. Research
Journal of Food and Agriculture, 32, 10-14, 2009.（北川貴士: 日本近海でのクロマグロの行動生態と水温適応. 農林水産技術

研究ジャーナル, 32, 10-14, 2009.）
Kitagawa T., Kimura S., Nakata H., Yamada H., Nitta A., Sasai Y. and Sasaki H.: Immature Pacific bluefin tuna, Thunnus
orientalis, utilizes cold waters in the Subarctic Frontal Zone for trans-Pacific migration. Environmental Biology of Fishes,
84, 193-196, 2009.

Kodama M., Komatsu K. and Tanaka K.: Impacts of load substances from the rivers on the marine coastal environment. In:“Japanese littleneck clam and basin region environments”, Ikuta K., Higano J., Kuwahara H. and Tsujimoto T. (eds.),
Kouseisya-Kouseikaku, pp.101-114, 2009.（児玉真史・小松幸生・田中勝久: 河川負荷の変動が沿岸海域環境に及ぼす影響.

「アサリと流域圏環境」, 161, 生田和正ほか（編）, 恒星社厚生閣, pp. 101-114, 2009.）
Masujima M. and Yasuda I.: Distribution and modification of North Pacific Intermediate Water around the Subarctic frontal zone
east of 150E. Journal of Physical Oceanography, 39, 1462-1474, 2009.

Miller M.J., Kimura S., Friedland K.D., Knights B., Kim H., Jellyman D.J. and Tsukamoto K.: Potential effects of oceanatmospheric changes on recruitment of temperate anguillid eels in the Atlantic and Pacific oceans. American Fisheries
Society Symposium, 69, 231-249, 2009.

Miyake Y., Kimura S., Kawamura T., Horii T., Kurogi H. and Kitagawa T.: Simulating larval dispersal processes for abalone using
a coupled particle-tracking and hydrodynamic model ―implications for refugium design. Marine Ecology Progress Series,
387, 205-222, 2009.

Miyazawa Y.，Zhang R.，Guo X.，Tamura H.，Ambe D.，Lee J.-S.，Okuno A.，Yoshinari H.，Setou T. and Komatsu K.: Water mass
variability in the western North Pacific detected in a 15-year eddy resolving ocean reanalysis, Journal of Oceanography,
65, 737-756, 2009.

Nakamura. Y., Shibuno T., Lecchini D., Kawamura T. and Watanabe Y.: Spatial variability in habitat associations of pre- andpost-settlement stages of coral reef fishes at Ishigaki Island, Japan. Marine Biology, 156, 2413-2419, 2009.

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Oohara I., Hoshino K., Takashima Y., Kobayashi T., Namba A., Shigenobu Y., Saruwatari T. and Yonezawa J.: Identification of 6
fish species in genus Cypselurus by using cytochrome b. DNA Polymorphism, 17, 121-125, 2009.（大原一郎・星野浩一・
高嶋康晴・小林敬典・難波亜紀・重信裕弥・猿渡敏郎・米沢純爾: Cytbを利用したハマトビウオ属6種の種判別について. DNA多型, 17, 121-125, 2009.）
Onitsuka T., Kawamura T., Horii T. and Watanabe Y.: Reproduction and early life ecology of abalone Haliotis diversicolor.
Proceedings of the 5th World Fisheries Congress, CD-ROM, 2009.

Oshima M., Kato Y., Masuda R., Kimura S. and Yamashita Y.: Effect of turbulence on feeding intensity and survival of Japaneseflounder Paralichthys olivaceus pelagic larvae. Journal of Fish Biology, 75, 1639-1647, 2009.
Shimizu Y., Takahashi K., Ito S.-I., Kakehii S., Tatebe H., Yasuda I., Kusaka A. and Nakayama T.: Transport of subarctic large
copepods from the Oyashio area to the mixed water region by Oyashio intrusions. Fisheries Oceanography, 18, 312-327,
2009.

Shirakihara K.: Marine protected area and fishery resource management. Gekkan Kaiyo, 41, 535-549, 2009.（白木原国雄: 海洋保護区と資源管理. 月刊海洋, 41, 535-542, 2009.）

Tadokoro K., Ono T., Yasuda I., Osafune S., Shiomoto A. and Sugisaki H.: Possible mechanisms of decadal scale variations in
PO4 concentration in the western North Pacific. Geophysical Research Letters, 36, L08606, 2009.

Takahashi M., Hayakawa J., Kawamura T., Ohashi S., Horii T. and Watanabe Y.: The settlement cues of an articulated coralline
alga Marginisporum crassissima for the Japanese top shell Turbo cornutus. Journal of Shellfish Research, 28, 569-575.
Takahashi M., Watanabe Y., Yatsu A. and Nishida H.: Contrasting responses in larval and juvenile growth to a climate-ocean
regime shift between anchovy and sardine. Canadian Journal of Fisheries and Aquatic Sciences, 66, 972-982, 2009.

Tanaka H., Saruwatari T. and Minami T.: Redescription of the first zoea of Zosimus aeneus (Linnaeus, 1758) (Decapoda.
Xanthidae). Crustacean Research, 38, 64-69, 2009.

Watanabe Y.: Recruitment variability of small pelagic fish populations in the Kuroshio-Oyashio transition region of the western
North Pacific. Journal of North Atlantic Fisheries Science, 41, 197-204, 2009.

Watanabe Y.: Fluctuating Living Marine Resources. In:“ Dynamics of Ocean Biosystems 5, Ocean and Life ― Seeking for the view oflife for marine organisms”, Tsukamoto K. (eds.), Tokai University Press, pp.388-401, 2009.（渡邊良朗: 変動する海の生物資源. 「海洋生命系のダイナミクス5

海と生命―「海の生命観」を求めて」, 東海大学出版会，pp. 388-401.）

Won N.-I., Kawamura T., Takami H. and Watanabe Y.: Ecological niches of abalone, Haliotis discus hannai, estimated by stable
isotope analyses. Proceedings of the 5th World Fisheries Congress, CD-ROM, 2009.

Yasuda I.: The 18.6-year period moon-tidal cycle in Pacific Decadal Oscillation reconstructed from tree-rings in western North
America. Geophysical Research Letters, 36, L05605, 4pp, 2009.

Zenimoto K., Kitagawa T., Miyazaki S., Sasai Y., Sasaki H. and Kimura S.: The effects of seasonal and interannual variabilityof oceanic structure in the western Pacific North Equatorial Current on larval transport of the Japanese eel (Anguillajaponica). Journal of Fish Biology, 74, 1878-1890, 2009.

Multiple Field Marine Science

Aoki M., Tanaka K., Kumagai N., Ito A., Subham B. and Komatsu T: Patterns of organization in epiphytic animal communities on
floating seaweed. Bulletin of Coastal Oceanography, 46, 137-140, 2009.（青木優和・田中克彦・熊谷直喜・伊藤 敦・ベギネー
ル サバン・小松輝久: 流れ藻葉上動物群集の形成パターン. 沿岸海洋研究, 46, 137-140, 2009. ）Chambers S., Zahorowski W., Matsumoto K. and Uematsu M.: Seasonal variability of radon-derived fetch regions for Sado
Island, Japan, based on 3 years of observations: 2002-2004. Atmospheric Environment, 43, 271-279, 2009.

Harino H., Arai T., Ohji M. and Miyazaki N.: Contamination profiles of antifouling biocides in selected coastal regions of
Malaysia. Archives of Environmental Contamination and Toxicology, 56, 468-478. 2009.

Harino H., Arai T., Ohji M. and Miyazaki N.: Organotin contamination in deep sea environment. In:“Ecotoxicology of Antifouling
Biocides”, Arai T., Harino H., Ohji M. and Langston W.J. (eds.), Springer, pp. 95-108, 2009.
Harino H., Arai T., Ohji M. and Miyazaki N.: Asia. 2009. In:“Ecotoxicology of Antifouling Biocides”, Arai T., Harino H., Ohji M.
and Langston W.J. (eds.), Springer, pp. 345-362, 2009.

Hashimoto S., Toda S., Narita Y., Kurihara M.K., Akatsuka Y., Oda H., Nagai T., Nagao I., Kato S., Kudo I., Suzuki K. and Uematsu
M.: Production and air-sea flux of methyl halides in the western subarctic Pacific in relation to phytoplankton pigment
concentrations during iron fertilization experiment (SEEDS II). Deep-Sea Research Part II, 56, 2928-2935, 2009.

Isobe T., Ochi Y., Ramu K., Yamamoto T., Tajima Y., Yamada T.K., Amano M., Miyazaki N., Takahashi S. and Tanabe S.:
Organohalogen contaminats in striped dolphins (Stenella coeruleoalba) from Japan ―Present contamination status, body
distribution and temporal trends (1978-2003). Marine Pollution Bulletin, 58, 396-401, 2009.

Jung. J., Jang. Y., Arimoto R., Uematsu M. and Lee G.: Atmospheric nitrogen deposition and its impact to Lake Sihwa in South
Korea from January 2004 to September 2005. Geochemical Journal, 43, 305-314, 2009.

Kato S., Watari M., Nagao I., Uematsu M. and Kajii Y.: Atmospheric trace gas measurements during SEEDS-II over the
Northwestern Pacific. Deep-Sea Research Part II, 56, 2918-2927, 2009.

Kawahata H., Yamamoto K., Ohkushi K., Yokoyama Y., Kimoto K., Ohshima H. and Matsuzaki H.: Changes of environments
and human activity at the Sannai-Maruyama ruins in Japan during the mid-Holocene Hypsithermal climatic interval.
Quaternary Science Reviews, 28, 964-974, 2009.

Kohzu A., Tayasu I., Yoshimizu C., Maruyama A., Kohmatsu Y., Hyodo F., Onoda Y., Igeta A., Matsui K., Nakano T., Wada E.,
Nagata T. and Takemon Y.: Nitrogen-stable isotopic signatures of basal food items, primary consumers and omnivores
in rivers with different levels of human impact. Ecological Research, 24, 127-136, 2009.

Komatsu T. and Michida Y.: A summary of the symposium“Drift of Marine Organism ―Transport from the Coast and their
Ecology”. Bulletin of Coastal Oceanography, 46, 75-76, 2009.（小松輝久・道田 豊: シンポジウム「海洋生物の漂流―沿岸からの輸送と生態」のまとめ. 沿岸海洋研究, 46, 75-76, 2009. ）Matsumoto K. and Uematsu M.: Geographical distribution of particle number density in the accumulation mode range over the
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North Pacific Ocean. Atmospheric Research, 92, 251-257, 2009.

Matsumoto K., Minami H., Uyama Y. and Uematsu M.: Size partitioning of particulate inorganic nitrogen species between thefine and coarse mode ranges and its implication to their deposition on the surface ocean. Atmospheric Environment, 43,4259-4265, 2009.

Michida Y.: Do you have the experience to touch the sea water ?, School Education, 1103, 70-73, 2009.（ 道田 豊: 海水に触れたことがありますか. 学校教育, 1103, 70-73, 2009.）

Miller N.L., Duffy P., Cayan D., Hidalgo H., Jin J., Kanamaru H., Kanamitsu M., O’Brien T., Schlegel N., Sloan L., Snyder M.
and Yoshimura K.: An evaluation of simulated California climate using multiple dynamical and statistical downscaling
techniques. California Energy Commission Report, CEC-500-2009-017-F, 2009.

Nagao I., Hashimoto S., Toda S., Narita Y., Suzuki K., Tsuda A., Saito H., Kudo I., Kato K, Kajii Y. and Uematsu M.: Responses
of seawater and atmospheric DMS to iron enrichment experiment (SEEDS-II) in the subarctic western North Pacific.
Deep-Sea Research Part II, 56, 2899-2917, 2009.

Nakayama A., Yagi H., Fujii Y., Watanabe K., Okano T., Takeda M., Watanabe H., Takagi, T. and Ogawa H.: Field Observationand development of numeric method for lower trophic production effect grasp by artificial upwelling producing structure,
Doboku Gakkai Ronbunshuu B, 65, 801-805, 2009.（中山哲嚴・八木 宏・藤井良昭・渡邉浩二・岡野崇裕・武田真典・渡辺秀

俊・高城隆昌・小川浩史: 湧昇マウンド礁による低次生産効果把握のための現地調査および数値計算手法の開発, 土木学会論文
集B2（海岸工学）, 65, 801-805, 2009.）
Nishioka J., Takeda S., Kondo Y., Obata H., Doi T., Tsumune D., Wong C.S., Johnson W.K. and Tsuda A.: Changes in ironconcentrations and bio-availability during an open ocean mesoscale iron enrichment in the western subarctic Pacific,
SEEDS II. Deep-Sea Research Part II, 56, 2796-2809, 2009.

Oka A., Hasumi H., Obata H., Gamo T. and Yamanaka Y.: Study on vertical profiles of rare earth elements by using an ocean
general circulation model. Global Biogeohemical Cycles, 23, GB4025, 16pp, 2009.

Oka M., Arai T., Shibata Y. and Miyazaki N.: Concentrations of persistent organic pollutants in masu salmon, Oncorhynchus
masou. Bulletin of Environmental Contamination and Toxicology, 83, 393-397, 2009.
Oka M., Arai T. and Miyazaki N.: Differences in accumulation pattern of organochlorine compounds in masu salmon between
fluvial and sea-run form. American Fisheries Society Symposium, 69, 863-865, 2009.

Radhakrishnan G., Yamamoto M., Maeda H., Nakagawa A., KatareGopalrao R., Okada H., Nishimori H., Wariishi S., Toda E.,
Ogawa H. and Sasaguri S.: Intake of dissolved organic matter from seawater inhibits atherosclerosis progression.
Biochemical and Biophysical Research Communications, 387, 25-30, 2009.

Saito H., Tsuda A., Nojiri Y., Aramaki T., Ogawa H., Yoshimura T., Imai K., Kudo I., Nishioka J., Ono T., Suzuki K. and Takeda S.:
Biogeochemical cycling of N and Si during the mesoscale iron-enrichment experiment in the western subarctic Pacific(SEEDS-II). Deep-Sea Research Part II, 56, 2852-2862, 2009.

Saruwatari T.: Collaborating research with aquariums. Their charm, accompolishment and what to be aware of. In:“ Research
activities at aquariums ―An intelligent world not limited to aquarium exhibits”, Saruwatari T. and Nishi G. (eds.), Tokai
University Press, pp.13-34, 2009.（ 猿渡敏郎: 水族館との共同研究―魅力，実績，注意点. 「研究する水族館―水槽展示だけではない知的な世界」, 猿渡敏郎・西 源二郎（編）, 東海大学出版会, pp.13-34, 2009.）
Saruwatari T. and Nishi G. (eds.): Research activities at aquariums ―An intelligent world not limited to aquarium exhibits, Tokai
University Press, 238pp, 2009.（ 猿渡敏郎・西 源二郎（編）: 「研究する水族館―水槽展示だけではない知的な世界」, 東海
大学出版会, 238pp, 2009.）
Saruwatari T.: New publication“Introduction to animal taxonomy”. Nippon Suisan Gakkaishi, 75, 934，2009.（ 猿渡敏郎: 新刊書紹介「動物分類学」. 日本水産学会誌, 75, 934, 2009. ）Shibata A., Yasui H., Fukuda H., Ogawa H., Kikuchi T., Toda T. and Taguchi S.: Fate of the bacterial cell envelope component,
lipopolysaccharide, that is sequentially mediated by viruses and flagellates. Coastal Marine Science, 33, 39-45, 2009.

Suzuki I., Naito Y., Folkow L.P., Miyazaki N. and Blix A.S.: Validation of a device for accurate timing of feeding events in marine
mammals. Polar Biology, 32, 667-671, 2009.

Takahashi T., Nakata H., Hirano K., Matsuoka K., Iwataki K., Yamaguchi H. and Kasuya K.: Upwelling of oxygen-depleted water(Sumishio) in Omura Bay, Japan. Journal of Oceanography, 65, 113-120, 2009.

Tanaka H. and Saruwatari T.: Describing larval ontogeny of crabs ―Larval developments of Artegatis floridus and A. subdentatusas examples. In:“Research activities at aquariums. An intelligent world not limited to aquarium exhibits.” Saruwatari T. andNishi G. (eds.), Tokai University Press, pp.119-134, 2009.（田中宏典・猿渡敏郎: カニ類幼生研究の実際―スベスベマンジュ

ウガニとアカマンジュウガニの個体発生を例に. 「研究する水族館―水槽展示だけではない知的な世界」, 猿渡敏郎・西 源二郎（編）, 東海大学出版会, pp. 119-134, 2009.）
Uematsu M: Science of Kosa ―flying in the sky and settling down on the deep-sea floor, Ohm bulletin, 44, 8-9, 2009.（植松光夫:
黄砂の科学―大空に舞い，深海底に降り積もる黄砂. オームブレテン, 44, 8-9, 2009.）

Uematsu M: Does air pollution make global warming weaken? Japan Geoscience Letters, 5, 1-3, 2009.（植松光夫：大気汚染が地球温暖化を抑止する？ Japan Geoscience Letters, 5, 1-3, 2009.）

Uno I., Eguchi K., Yumimoto K., Takemura T., Shimizu A., Uematsu M., Liu Z., Wang Z., Hara Y. and Sugimoto N.: Asian dusttransported one full circuit around the globe. Nature Geoscience, 2, 557-560, 2009.

Williams A.G., Chambers S., Zahorowski W., Crawford J., Matsumoto K. and Uematsu M.: Estimating the Asian radon flux
density and its latitudinal gradient in winter using ground-based radon observations at Sado Island. Tellus, 61B,
732-746, 2009.

Yang J., Oshima Y., Ito S. and Miyazaki N.: Metabolism of tributyltin and phenyltin by Dall’s porpoise hepatic microsomes.
Chemosphere, 76, 1013-1015, 2009.
Yoshimura T., Ogawa H., Imai K., Aramaki T., Nojiri Y., Nishioka J. and Tsuda A.: Dynamics and elemental stoichiometry ofcarbon, nitrogen, and phosphorus in particulate and dissolved organic pools during a phytoplankton bloom induced byin situ iron enrichment in the western subarctic Pacific (SEEDS-II). Deep-Sea Research Part II, 56, 2863-2874, 2009.

96

ANNUALREPORT

ATMOSPHERE AND OCEAN RESEARCH INSTITUTE
THE UNIVERSITY OF TOKYO

研究業績｜ PUBLICATION LISTHADEEP

Jamieson A.J., Fujii T., Solan M., Matsumoto A.K., Bagley P.M. and Priede I.G.: Liparid and Macrourid fishes of the hadal zone
―In situ observations of activity and feeding behaviour. Proceedings of the Royal Society Part B, 276, 1037-1045, 2009.
Jamieson A.J., Fujii T., Solan M., Matsumoto A.K., Bagley P.M. and Priede I.G.: First findings of decapod crustacea in thehadal-zone. Deep-Sea Research Part I, 56, 641-647, 2009.

Jamieson A.J., Solan M. and Fujii T.: Imaging deep-sea life beyond the abyssal zone. Sea Technology, 50 (3), 41-46, 2009.

Jamieson A.J., Fujii T., Solan M. and Priede I.G.: HADEEP: Free-falling landers to the deepest places on Earth. Marine
Technology Society Journal, 43 (5), 151-160, 2009.

Kaim A., Bitner M. A., Jenkins R.G. and Hikida Y.: A monospecific assemblage of terebratulide brachiopods in the Upper
Cretaceous seep deposits of Omagari, Hokkaido, Japan. Acta Palaeontologica Polonica, 55, 73-84, 2009.

Kaim A., Jenkins R.G. and Hikida Y.: Gastropods from Late Cretaceous Omagari and Yasukawa hydrocarbon seep deposits in
the Nakagawa area, Hokkaido, Japan. Acta Palaeontologica Polonica, 54, 463-490, 2009.
Machida S., Hirano N. and Kimura J.-I.: Evidence for recycled plate material in Pacific upper mantle unrelated to plumes.
Geochimica et Cosmochimica Acta, 73, 3028-3037, 2009.

Oji T., Ogawa Y., Hunter A. and Kitazawa K.: Discovery of dense aggregations of stalked crinoids in Izu-Ogasawara Trench,
Japan. Zoological Science, 26, 406-408, 2009.

Sawai E., Yamanoue Y., Sakai y. and Hashimoto H.: On the abnormally morphological forms in Mola sunfish (Mola spp. A andB)taken from Japanese coastal waters. Journal of the Graduate School of Biosphere Science, Hiroshima University, 48, 9-17
（澤井悦郎・山野上祐介・坂井陽一・橋本博明: 日本近海で採集されたマンボウ属 (Mola spp. A and B) の形態異常個体. 広島
大学大学院生物圏科学研究科紀要, 48, 9-17, 2009.）
Yamanoue Y.: Redescription of Amioides grossidens Smith and Radcliffe 1912 as a valid genus and species of Acropomatidae(Perciformes). Ichthyological Research, 56, 407-410, 2009.

Yamanoue Y., Johnson G.D. and Starnes W.C.: Redescription of a poorly known acropomatid, Verilus sordidus Poey 1860, andcomparison with Neoscombrops atlanticus Mochizuki and Sano 1984 (Teleostei: Perciformes). Ichthyological Research,
56, 400-406, 2009.

Yoshita Y., Yamanoue Y., Sagara K., Nishibori M., Kuniyoshi H., Umino T., Sakai Y., Hashimoto H. and Gushima K.: Phylogenetic
relationship of two Mola sunfishes (Tetraodontiformes: Molidae) occurring around the coast of Japan, with notes on theirgeographical distribution and morphological characteristics. Ichthyological Research, 56, 232-244, 2009.