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title=“Glycolysis / Gluconeogenesis”
image=http://www.genome.ad.jp/kegg/pathway/enzyme/enzyme00010.gif
link=“http://www.genome.ad.jp/dbget-bin/show_pathway?enzyme00010”>…
<entry id=“43” name=“ec:5.4.2.2” type=“enzyme” reaction=“rn:R00959”
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type=“rectangle” x=“536” y=“167” width=“45” height=“17”/></entry>…
<entry id=“88” name=“cpd:C00668” type=“compound”
link=“http://www.genome.ad.jp/dbget-bin/www_bget?compound+C00668”><graphics name=“C00668” fgcolor=“#000000” bgcolor=“#FFFFFF”
type=“circle” x=“532” y=“253” width=“8” height=“8”/></entry>…
<relation entry1=“43” entry2=“53” type=“ECrel” compound=“88”/><relation entry1="42" entry2="43" type="ECrel" compound="88"/><relation entry1=“42” entry2=“52” type=“ECrel” compound=“88”/><relation entry1=“42” entry2=“51” type=“ECrel” compound=“88”/>…
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title=“Glycolysis / Gluconeogenesis”
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link=“http://www.genome.ad.jp/dbget-bin/show_pathway?enzyme00010”>…
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type=“rectangle” x=“536” y=“167” width=“45” height=“17”/></entry>…
<entry id=“88” name=“cpd:C00668” type=“compound”
link=“http://www.genome.ad.jp/dbget-bin/www_bget?compound+C00668”><graphics name=“C00668” fgcolor=“#000000” bgcolor=“#FFFFFF”
type=“circle” x=“532” y=“253” width=“8” height=“8”/></entry>…
<relation entry1=“43” entry2=“53” type=“ECrel” compound=“88”/><relation entry1="42" entry2="43" type="ECrel" compound="88"/><relation entry1=“42” entry2=“52” type=“ECrel” compound=“88”/><relation entry1=“42” entry2=“51” type=“ECrel” compound=“88”/>…
<reaction name=“rn:R00959” type=“reversible”><substrate name=“cpd:C00103”/><product name=“cpd:C00668”/></reaction><?xml version=“1.0”?><!DOCTYPE pathway SYSTEM “http://www.genome.ad.jp/kegg/xml/KGML_v0.3_.dtd”><!-- Creation date: Feb 05 2004 01:14:10 +0900 (JST) --><pathway name=“path:enzyme00010” org=“enzyme” number=“00010”
title=“Glycolysis / Gluconeogenesis”
image=http://www.genome.ad.jp/kegg/pathway/enzyme/enzyme00010.gif
link=“http://www.genome.ad.jp/dbget-bin/show_pathway?enzyme00010”>…
<entry id=“43” name=“ec:5.4.2.2” type=“enzyme” reaction=“rn:R00959”
link=“http://www.genome.ad.jp/dbget-bin/www_bget?enzyme+5.4.2.2”><graphics name=“5.4.2.2” fgcolor=“#000000” bgcolor=“#FFFFFF”
type=“rectangle” x=“536” y=“167” width=“45” height=“17”/></entry>…
<entry id=“88” name=“cpd:C00668” type=“compound”
link=“http://www.genome.ad.jp/dbget-bin/www_bget?compound+C00668”><graphics name=“C00668” fgcolor=“#000000” bgcolor=“#FFFFFF”
type=“circle” x=“532” y=“253” width=“8” height=“8”/></entry>…
<relation entry1=“43” entry2=“53” type=“ECrel” compound=“88”/><relation entry1="42" entry2="43" type="ECrel" compound="88"/><relation entry1=“42” entry2=“52” type=“ECrel” compound=“88”/><relation entry1=“42” entry2=“51” type=“ECrel” compound=“88”/>…
<reaction name=“rn:R00959” type=“reversible”><substrate name=“cpd:C00103”/><product name=“cpd:C00668”/></reaction>!"#"$%&'()*+,-./© Copyright 2005 Susumu Goto, BIC, ICR, Kyoto Univ.

±²ÜƒÀÁ%¿’8+9:";<=><+-¤

3<Ð-•X V 7ÑTk-•X EV = {A, B, C, D, E, F, G}
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A 1 1 0 0 0 1 1
B 0 1 0 0 0 0 0
C 1 0 1 0 0 0 0
D 0 0 0 1 0 1 0
E 0 0 0 1 1 0 0
F 0 0 0 0 1 1 0
G 0 0 1 0 1 0 1

A B F GBC A
D FE DF E
G C E!"#"$%&'()*+,-./© Copyright 2005 Susumu Goto, BIC, ICR, Kyoto Univ.

16© Copyright 2005 Susumu Goto, BIC, ICR, Kyoto Univ.

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Üƒ8+9:"-ÀÁ%¿’Üƒ8+9:"-ÀÁ%¿’! ÀÁ%àG = (V, E)• V: 3<Ð•WXRŽ-•X• E: ÑTk•ÜƒŽ-•X

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B
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30!"#"$%&'()*+,-./© Copyright 2005 Susumu Goto, BIC, ICR, Kyoto Univ.

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fabD, tfpA; malonyl CoA-acyl carrier protein transacylase [EC:2.3.1.39]
fabF, fabJ; 3-oxoacyl-[acyl-carrier-protein] synthase [EC:2.3.1.41]

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36®pØj%Ù"Ãt…‡;<=! Pellegrini et al.
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8+9:"56w-—r-•ž

URLs! ˜™

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• 8+9:"-ˆ¾CD‰°}ÐÁTÀ=<2TU-AB• Kyoto Encyclopedia of Genes and Genomes! http://www.genome.jp/kegg/• XML! http://www.genome.jp/kegg/xml/• PathComp! QŠ! http://www.genome.jp/kegg/tool/pathcomp.html• ~–³´QR-X*?@->U7‹›W! MBGD: Microbial Genome Database! £WŠ56• 8+9:"-ˆ¾CD‰°}8+9:"£W5œ• •^^R7ó-žŸ7-ÇÈ!"#"$%&'()*+,-./© Copyright 2005 Susumu Goto, BIC, ICR, Kyoto Univ.

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• http://mbgd.genome.ad.jp/! á• http://goto.kuicr.kyoto-u.ac.jp/lecture/bioinfo.html
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