Genetic Background Monitoring Report

No.： 120425-0511

BRC No.: RBRC00671
Strain Name (Official Nomenclature): B6.129P2-Amd1<tm1Kiga>
Strain Type: Mutant Strain
Strain of Origin: 129P2/OlaHsd
Donor Strain: E14 (ES cell)
Background Strain: C57BL/6NCrSlc
Date:2012/06/19
ID of animals surveyed
0000201(C)
1(G?+N0)(Generation ) / Sex
2LocusType Location
Male
SSLP Chr1:19802051-19802209
B6/B6
1 D1Mit3
SSLP Chr1:Syntenic
B6/B6
2 D1Mit322
C/C
3 rs13475886* SNP Chr1:61228463
SSLP Chr1:73734337-73734492
B6/B6
4 D1Mit19
SSLP Chr1:98827535-98827643
B6/B6
5 D1Mit306
SSLP Chr1:154473511-154473632
B6/B6
6 D1Mit501
SSLP Chr1:176558864-176559001
B6/B6
7 D1Mit150
A/A
8 rs13476359* SNP Chr2:16607458
SSLP Chr2:27277814-27277911
B6/B6
9 D2Mit431
SSLP Chr2:65277459-65277647
B6/B6
10 D2Mit9
SSLP Chr2:106750096-106750239
B6/B6
11 D2Mit206
SSLP Chr2:153798642-153798751
B6/B6
12 D2Mit493
SSLP Chr2:168761877-168761999
B6/B6
13 D2Mit456
SSLP Chr2:178535250-178535364
B6/B6
14 D2Mit148
SSLP Chr3:31137265-31137413
B6/B6
15 D3Mit151
SSLP Chr3:71816030-71816141
B6/B6
16 D3Mit278
SSLP Chr3:123334565-123334712
B6/B6
17 D3Mit318
SSLP Chr3:148932688-148932790
B6/B6
18 D3Mit293
SSLP Chr4:3584271-3584381
B6/B6
19 D4Mit149
SSLP Chr4:25610387-25610576
B6/B6
20 D4Mit2
SSLP Chr4:63026328-63026475
B6/B6
21 D4Mit17
SSLP Chr4:66843059-66843205
B6/B6
22 D4Mit178
SSLP Chr4:123838543-123838630
B6/B6
23 D4Mit308
SSLP Chr4:153093974-153094108
B6/B6
24 D4Mit254
SSLP Chr5:8797672-8797875
B6/B6
25 D5Mit48
SSLP Chr5:Syntenic
B6/B6
26 D5Mit267
SSLP Chr5:89700063-89700172
B6/B6
27 D5Mit398
SSLP Chr5:125309605-125309718
B6/B6
28 D5Mit95
SSLP Chr5:127286127-127286250
B6/B6
29 D5Mit320
SSLP
Chr5:139608988-139609104
B6/B6
30 D5Mit374
C/C
31 rs33208334* SNP Chr5:150428596
SSLP Chr6:55505943-55506037
B6/B6
32 D6Mit316
SSLP Chr6:87375892-87376028
B6/B6
33 D6Mit9
SSLP Chr6:93413943-93414087
B6/B6
34 D6Mit102
SSLP Chr6:114232092-114232201
B6/B6
35 D6Mit55
SSLP Chr6:136372097-136372213
B6/B6
36 D6Mit339
Kazuyuki Mekada, Ph.D. (2012/6/19)

Genetic Background Monitoring Report

No.： 120425-0511

BRC No.: RBRC00671
Strain Name (Official Nomenclature): B6.129P2-Amd1<tm1Kiga>
Strain Type: Mutant Strain
Strain of Origin: 129P2/OlaHsd
Donor Strain: E14 (ES cell)
Background Strain: C57BL/6NCrSlc
Date:2012/06/19
ID of animals surveyed
0000201(C)
1(G?+N0)(Generation ) / Sex
2LocusType Location
Male
SSLP Chr7:31118079-31118215
B6/B6
37 D7Mit246
SSLP Chr7:52767912-52768056
B6/B6
38 D7Mit81
SSLP Chr7:126237672-126237821
B6/B6
39 D7Mit238
SSLP Chr7:Syntenic
B6/B6
40 D7Mit189
SSLP Chr8:37226054-37226173
B6/B6
41 D8Mit293
SSLP Chr8:91727514-91727649
B6/B6
42 D8Mit81
SSLP Chr8:Syntenic
B6/B6
43 D8Mit14
SSLP Chr9:41695932-41696113
B6/B6
44 D9Mit328
SSLP Chr9:87838840-87839011
B6/B6
45 D9Mit269
SSLP Chr9:115307830-115307967
B6/B6
46 D9Mit214
SSLP Chr10:20654078-20654202
B6/B6
47 D10Mit282
SSLP Chr10:67674940-67675089
B6/B6
48 D10Mit223
SSLP Chr10:91885360-91885556
B6/B6
49 D10Mit11
SSLP Chr10:117587667-117587800
B6/B6
50 D10Mit180
SSLP Chr11:45088548-45088651
B6/B6
51 D11Mit236
SSLP Chr11:61609496-61609590
B6/B6
52 D11Mit260
SSLP Chr11:72132472-72132603
B6/B6
53 D11Mit219
SSLP Chr11:108575096-108575220
B6/B6
54 D11Mit333
SSLP Chr12:35920169-35920310
B6/B6
55 D12Mit153
SSLP Chr12:70900839-70901009
B6/B6
56 D12Mit34
SSLP Chr12:105536654-105536786
B6/B6
57 D12Mit102
SSLP Chr12:Syntenic
B6/B6
58 D12Mit7
SSLP Chr13:37654832-37654949
B6/B6
59 D13Mit117
SSLP Chr13:44860362-44860453
B6/B6
60 D13Mit179
SSLP Chr13:98359080-98359187
B6/B6
61 D13Mit147
SSLP Chr13:120128451-120128643
B6/B6
62 D13Mit35
SSLP Chr14:54729500-54729624
B6/B6
63 D14Mit259
SSLP Chr14:71921427-71921544
B6/B6
64 D14Mit193
SSLP Chr14:106982674-106982807
B6/B6
65 D14Mit165
SSLP Chr15:30776615-30776757
B6/B6
66 D15Mit136
SSLP Chr15:43279930-43280030
B6/B6
67 D15Mit5
SSLP Chr15:74075586-74075734
B6/B6
68 D15Mit29
SSLP Chr15:83586169-83586316
B6/B6
69 D15Mit33
SSLP Chr16:7319135-7319274
B6/B6
70 D16Mit131
SSLP Chr16:38433970-38434154
B6/B6
71 D16Mit59
SSLP Chr16:78953071-78953200
B6/B6
72 D16Mit50
Kazuyuki Mekada, Ph.D. (2012/6/19)

Genetic Background Monitoring Report

No.： 120425-0511

BRC No.: RBRC00671
Strain Name (Official Nomenclature): B6.129P2-Amd1<tm1Kiga>
Strain Type: Mutant Strain
Strain of Origin: 129P2/OlaHsd
Donor Strain: E14 (ES cell)
Background Strain: C57BL/6NCrSlc
Date:2012/06/19
ID of animals surveyed
0000201(C)
1(G?+N0)(Generation ) / Sex
2LocusType Location
Male
SSLP Chr16:98051757-98051902
B6/B6
73 D16Mit106
SSLP Chr17:16752157-16752280
B6/B6
74 D17Mit213
SSLP Chr17:49744546-49744658
B6/B6
75 D17Mit108
SSLP Chr17:79631462-79631708
B6/B6
76 D17Mit187
SSLP Chr18:41142161-41142331
B6/B6
77 D18Mit177
SSLP Chr18:66978897-66979068
B6/B6
78 D18Mit184
SSLP Chr18:75548607-75548726
B6/B6
79 D18Mit142
SSLP Chr18:83585146-83585269
B6/B6
80 D18Mit216
SSLP Chr19:21916083-21916201
B6/B6
81 D19Mit96
SSLP Chr19:37331405-37331552
B6/B6
82 D19Mit88
SSLP Chr19:42295742-42295862
B6/B6
83 D19Mit90
SSLP Chr19:59674330-59674465
B6/B6
84 D19Mit71
SSLP ChrX:49036675-49036788
B6/B6
85 DXMit166
SSLP ChrX:69741824-69741934
B6/B6
86 DXMit210
SSLP ChrX:130298712-130298880
B6/B687 DXMit1301
Generation definitions: N_Number of backcross generations; F_Filial or inbreeding generations;
M_Cross-intercross breeding generations; ?: Use when the prior breeding history is not known;+_Generation numbers before the "+" took place in the donating investigator, after the "+", at RIKEN
BRC.
2
based on UniSTS annotation of NCBI Build 37
Haplotype combination:
B6/B6_C57BL/6 homozygous allele, 129/129_129 homozygous allele, B6/129_heterozyous allele*SNP for distinguishing among C57BL/6 substrains
rs13475886: T_C57BL/6J, C57BL/6JJcl, C57BL/6JJms type allele, C_other C57BL/6 substrain type allele
rs13476359: G_C57BL/6J, A_other C57BL/6 substrains type allele
rs33208334: T_C57BL/6J, C57BL/6JJcl type allele, C_other C57BL/6 substrains type allele

Kazuyuki Mekada, Ph.D. (2012/6/19)