Genetic Background Monitoring Report

No.： 101115-26

BRC No.: RBRC01417
Strain Type: Mutant Stock
Strain Name: C;HR1-Hr<hr>
Strain of origin: Not Specified
Donor strain: Hos:HR-1 (closed colony)
Background strain: BALB/cAnNMs
Date: 2010/11/15
ID of animals surveyed
S00350605
000201000205
1(M7)
(M0)
(M0)
(Generation ) / SexLocus
Type Location2
Male, hr/hr Female, hr/+Male, hr/+
1
D1Mit211
SSLP Chr1:25567955-25568090
BALB/BALB BALB/HR1?
BALB/HR1?
2
D1Mit33
SSLP Chr1:160335734-160335833
BALB/BALB BALB/HR1BALB/HR13
D1Mit293
SSLP Chr1:194824788-194824936
BALB/BALB BALB/HR1
BALB/HR14
D2Mit285
SSLP Chr2:152683037-152683177
BALB/BALB BALB/HR1?
BALB/HR1?
5
D2Mit148
SSLP Chr2:178535250-178535364
BALB/BALB BALB/HR1
BALB/HR16
D3Mit117
SSLP Chr3:5806440-5806615
BALB/BALB BALB/HR1BALB/HR17
D3Mit65
SSLP Chr3:50488800-50488920
BALB/BALB BALB/HR1?
BALB/HR1?
8D3Mit29
SSLP Chr3:90407831-90407979
BALB/BALB BALB/HR1BALB/HR19D4Mit149
SSLP Chr4:3584271-3584381
BALB/BALB BALB/HR1BALB/HR110D4Mit111
SSLP Chr4:53563711-53563839
BALB/BALB BALB/HR1BALB/HR111
D4Mit254
SSLP Chr4:153093974-153094108
BALB/BALB BALB/HR1BALB/HR112D5Mit239
SSLP Chr5:107842159-107842304
BALB/BALB BALB/HR1BALB/HR113
D6Mit138
SSLP Chr6:4453823-4453937
BALB/BALB BALB/HR1BALB/HR114D6Mit284
SSLP Chr6:92557300-92557444
BALB/BALB BALB/HR1
BALB/HR115
D6Mit254
SSLP Chr6:125306664-125306803
BALB/BALB BALB/HR1
BALB/HR116
D7Mit246
SSLP Chr7:31118079-31118215
BALB/BALB BALB/HR1
BALB/HR117
D7Mit220
SSLP Chr7:111543239-111543373
BALB/BALB BALB/HR1?
BALB/HR1?
18
D8Mit211
SSLP Chr8:105240821-105240969
BALB/BALB BALB/HR1?
BALB/HR1?
19
D8Mit91
SSLP Chr8:126988322-126988465
BALB/BALB BALB/HR1
BALB/HR120
D9Mit328
SSLP Chr9:41695932-41696113
BALB/BALB BALB/HR1BALB/HR121
D9Mit214
SSLP Chr9:115307830-115307967
BALB/BALB BALB/HR1BALB/HR122D9Mit18
SSLP Chr9:120198563-120198742
BALB/BALB BALB/HR1BALB/HR123
D10Mit180 SSLP Chr10:117587667-117587800 BALB/BALB BALB/HR1BALB/HR124
D11Mit152 SSLP Chr11:24126273-24126405
BALB/BALB BALB/HR1BALB/HR125
D11Mit242 SSLP Chr11:63242083-63242198
BALB/BALB BALB/HR1BALB/HR126
D12Mit182 SSLP Chr12:108575096-108575220 BALB/BALB BALB/HR1BALB/HR127
D13Mit3
SSLP Chr13:20523211-20523371
BALB/HR1BALB/HR1BALB/HR128
D13Mit179 SSLP Chr13:44860362-44860453
BALB/BALB BALB/HR1BALB/HR129
D13Mit147 SSLP Chr13:98359080-98359187
BALB/BALB BALB/HR1BALB/HR130
D14Mit203 SSLP Chr14:Syntenic
BALB/BALB BALB/HR1BALB/HR131
D14Mit195 SSLP Chr14:88383595-88383715
BALB/BALB BALB/HR1BALB/HR132
D14Mit266 SSLP Chr14:121431467-121431614 BALB/HR1? BALB/HR1?
BALB/HR1?
33
D15Mit63
SSLP Chr15:65076746-65076890
BALB/BALB BALB/HR1BALB/HR134
D16Mit139 SSLP Chr16:65669762-65669911
BALB/BALB BALB/HR1BALB/HR135
D17Mit16
SSLP Chr17:86209320-86209506
BALB/BALB BALB/HR1BALB/HR136
D18Mit177 SSLP Chr18:41142161-41142331
BALB/HR137
D18Mit184 SSLP Chr18:66978897-66979068
BALB/BALB BALB/HR1BALB/HR138
DXMit149 SSLP ChrX:124541535-124541811
BALB/BALB BALB/HR1BALB/HR139DXMit249 SSLP ChrX:160413766-160413877 BALB/BALB BALB/HR1BALB/HR1
1
Generation definitions: N_Number of backcross generations; F_Filial or inbreeding generations; M_Cross-intercross breedinggenerations; ?: Use when the prior breeding history is not known; +_Generation numbers before the "+" took place in the
donating investigator, after the "+", at RIKEN BRC.
2
based on UniSTS annotation of NCBI Build 37
Haplotype combination:
BALB/BALB_BALB/c homozygous allele, HR1/HR1_HR-1 homozygous allele, BALB/HR1_heterozyous allele

Kazuyuki Mekada, Ph.D. (2011/12/8)