連携教員等による論文（2019年-）※※ 所属情報にUniversity of Tsukubaが含まれるもの。

Authors

Volume Issue

Pages

2019 Nature Medicine

25

6968-976

Kikuchi, K.| Saigusa, D.| Kanemitsu, Y.| Matsumoto, Y.| Thanai, P.| Suzuki, N.|
Gut microbiome-derived phenyl sulfate contributes to albuminuria in
Mise, K.| Yamaguchi, H.| Nakamura, T.| Asaji, K.| Mukawa, C.| Tsukamoto, H.|diabetic kidney diseaseSato, T.| Oikawa, Y.| Iwasaki, T.| Oe, Y.| Tsukimi, T.| Fukuda, N.N.| Ho, H.-J.|
Nanto-Hara, F.| Ogura, J.| Saito, R.| Nagao, S.| Ohsaki, Y.| Shimada, S.| Suzuki, T.|
Toyohara, T.| Mishima, E.| Shima, H.| Akiyama, Y.| Akiyama, Y.| Ichijo, M.|
Matsuhashi, T.| Matsuo, A.| Ogata, Y.| Yang, C.-C.| Suzuki, C.| Breeggemann, M.C.|
Heymann, J.| Shimizu, M.| Ogawa, S.| Takahashi, N.| Suzuki, T.| Owada, Y.| Kure,
S.| Mano, N.| Soga, T.| Wada, T.| Kopp, J.B.| Fukuda, S.| Hozawa, A.| Yamamoto,M.| Ito, S.| Wada, J.| Tomioka, Y.| Abe, T.

2019 Nature Communications

10

1

-

Sher, F.| Hossain, M.| Seruggia, D.| Schoonenberg, V.A.C.| Yao, Q.| Cifani, P.|
Rational targeting of a NuRD subcomplex guided by comprehensive in
Dassama, L.M.K.| Cole, M.A.| Ren, C.| Vinjamur, D.S.| Macias-Trevino, C.| Luk,situ mutagenesis
K.| McGuckin, C.| Schupp, P.G.| Canver, M.C.| Kurita, R.| Nakamura, Y.| Fujiwara,
Y.| Wolfe, S.A.| Pinello, L.| Maeda, T.| Kentsis, A.| Orkin, S.H.| Bauer, D.E.

2019 Nature Genetics

51

711491159

Kushida, M.| Sugawara, S.| Asano, M.| Yamamoto, K.| Fukuda, S.| Tsuduki, T.

Effects of the 1975 Japanese diet on the gut microbiota in younger adults

2019 Journal of Nutritional Biochemistry64-

121-127

Nagata, N.| Tohya, M.| Fukuda, S.| Suda, W.| Nishijima, S.| Takeuchi, F.| Ohsugi,
M.| Tsujimoto, T.| Nakamura, T.| Shimomura, A.| Yanagisawa, N.| Hisada, Y.|
Watanabe, K.| Imbe, K.| Akiyama, J.| Mizokami, M.| Miyoshi-Akiyama, T.|
Uemura, N.| Hattori, M.

Effects of bowel preparation on the human gut microbiome andmetabolome

2019 Scientific Reports

9

1

-

Liu, B.| Maekawa, T.| Yoshida, K.| Ly, N.H.| Inoue, K.| Hasegawa, A.| Chatton, B.| Telomere shortening by transgenerational transmission of TNF-αOgura, A.| Ishii, S.
induced TERRA via ATF72019 Nucleic Acids Research471283-298

Chung, J.E.| Magis, W.| Vu, J.| Heo, S.-J.| Wartiovaara, K.| Walters, M.C.| Kurita,
R.| Nakamura, Y.| Boffelli, D.| Martin, D.I.K.| Corn, J.E.| DeWitt, M.A.

CRISPR-Cas9 interrogation of a putative fetal globin repressor in humanerythroid cells

2019 PLoS ONE

14

1

-

Jo, R.| Nishimoto, Y.| Umezawa, K.| Yama, K.| Aita, Y.| Ichiba, Y.| Murakami, S.|
Kakizawa, Y.| Kumagai, T.| Yamada, T.| Fukuda, S.

Comparison of oral microbiome profiles in stimulated and unstimulated
saliva, tongue, and mouth-rinsed water2019 Scientific Reports

9

1

-

2019 International Immunology

3110657-668

Yachida, S.| Mizutani, S.| Shiroma, H.| Shiba, S.| Nakajima, T.| Sakamoto, T.|
Watanabe, H.| Masuda, K.| Nishimoto, Y.| Kubo, M.| Hosoda, F.| Rokutan, H.|
Matsumoto, M.| Takamaru, H.| Yamada, M.| Matsuda, T.| Iwasaki, M.| Yamaji, T.|
Yachida, T.| Soga, T.| Kurokawa, K.| Toyoda, A.| Ogura, Y.| Hayashi, T.|
Hatakeyama, M.| Nakagama, H.| Saito, Y.| Fukuda, S.| Shibata, T.| Yamada, T.

Title
Metagenomic and metabolomic analyses reveal distinct stage-specificphenotypes of the gut microbiota in colorectal cancer

Orimo, T.| Sasaki, I.| Hemmi, H.| Ozasa, T.| Fukuda-Ohta, Y.| Ohta, T.| Morinaka, Cholera toxin B induces interleukin-1β production from resident
M.| Kitauchi, M.| Yamaguchi, T.| Sato, Y.| Tanaka, T.| Hoshino, K.| Katayama, K.- peritoneal macrophages through the pyrin inflammasome as well as the
I.| Fukuda, S.| Miyake, K.| Yamamoto, M.| Satoh, T.| Furukawa, K.| Kuroda, E.|
NLRP3 inflammasome
Ishii, K.J.| Takeda, K.| Kaisho, T.

Year

JournalAuthors

Title

Year

JournalVolume Issue

Pages

Sato, C.| Yamazawa, T.| Ohtani, A.| Maruyama, Y.| Memtily, N.| Sato, M.| Hatano,Y.| Shiga, T.| Ebihara, T.

Primary cultured neuronal networks and type 2 diabetes model mousefatty liver tissues in aqueous liquid observed by atmospheric SEM(ASEM): Staining preferences of metal solutions

2019 Micron

118

-

9-21

Doi, A.| Kano, S.| Asano, M.| Takahashi, Y.| Mimori, T.| Mimori, A.| Kaneko, H.

Autoantibodies to killer cell immunoglobulin-like receptor 3DL1 inpatients with systemic lupus erythematosus

2019 Clinical and Experimental
Immunology

1953

358-363

Aw, W.| Fukuda, S.

Protective effects of bifidobacteria against enteropathogens

2019 Microbial Biotechnology

12

610971100

Chang, C.-J.| Wang, P.-C.| Huang, T.-C.| Taniguchi, A.

Change in renal glomerular collagens and glomerular filtration barrierrelated proteins in a dextran sulfate sodium-induced colitis mouse model2019 International Journal of Molecular
Sciences20

6-

Ly, N.H.| Maekawa, T.| Yoshida, K.| Liu, Y.| Muratani, M.| Ishii, S.

RNA-sequencing analysis of paternal low-protein diet-induced gene
expression change in mouse offspring adipocytes

2019 G3: Genes, Genomes, Genetics

9721612170

Liu, Y.| Maekawa, T.| Yoshida, K.| Muratani, M.| Chatton, B.| Ishii, S.

The Transcription Factor ATF7 Controls Adipocyte Differentiation andThermogenic Gene Programming2019 iScience13-

98-112

Yang, J.| Tsukimi, T.| Yoshikawa, M.| Suzuki, K.| Takeda, T.| Tomita, M.| Fukuda, Cutibacterium acnes (Propionibacterium acnes) 16S rRNA genotyping ofS.
microbial samples from possessions contributes to owner identification

2019 mSystems

4

6

-

Sugiyama, Y.| Oishi, T.| Yamashita, A.| Murata, Y.| Yamamoto, T.| Takashima, I.|
Isa, T.| Higo, N.

Neuronal and microglial localization of secreted phosphoprotein 1(osteopontin) in intact and damaged motor cortex of macaques

2019 Brain Research

1714

-

52-64

Al-Zain, Y.| Yamamoto, A.| AlAjlouni, J.M.| Al-Abbadi, M.A.| Al-Sayyed, M.R.|
Aloweidi, A.S.| Kim, H.Y.| Miyazaki, S.

Corrosion behavior, in vitro and in vivo biocompatibility of a newly
developed Ti–16Nb–3Mo–1Sn superelastic alloy2019 Materials Science and Engineering C

104

-

-

Xue, H.| Sun, L.| Fujimoto, H.| Suzuki, T.| Takahashi, Y.| Ohnishi, K.

Artificial immunoglobulin light chain with potential to associate with awide variety of immunoglobulin heavy chains2019 Biochemical and Biophysical Research 515
Communications

3481-486

Sun, L.| Kono, N.| Toh, H.| Xue, H.| Sano, K.| Suzuki, T.| Ainai, A.| Orba, Y.|
Yamagishi, J.| Hasegawa, H.| Takahashi, Y.| Itamura, S.| Ohnishi, K.

Identification of Mouse and Human Antibody Repertoires by NextGeneration Sequencing

2019 Journal of visualized experiments :
JoVE

-

145

-

Nakane, T.| Angata, K.| Sato, T.| Kaji, H.| Narimatsu, H.

Identification of mammalian glycoproteins with type-I LacdiNAc
structures synthesized by the glycosyltransferase B3GALNT2

2019 Journal of Biological Chemistry

294

18

74337444

Ohashi, M.| Maeda, S.-I.| Sato, C.

Bayesian inference for three-dimensional helical reconstruction using asoft-body model2019 Physical Review E

100

4

-

Authors

Volume Issue

Pages

2019 Genes to Cells

249627-635

Tanaka, K.| Watabe, T.| Kato, K.| Tsukimi, T.| Sato, M.P.| Odamaki, T.| Tomita, M.| Draft Genome Sequences of Enterococcus faecalis Strains Isolated from
Fukuda, S.
Healthy Japanese Individuals

2019 Microbiology Resource
Announcements

8

40

-

Sato, Y.| Yamada, T.| Hiroyama, T.| Sudo, K.| Hasegawa, N.| Hyodo, I.| Nakamura, A robust culture method for maintaining tumorigenic cancer stem cells inY.
the hepatocellular carcinoma cell line Li-7

2019 Cancer Science

110

516441652

Kitamoto, S.| Alteri, C.J.| Rodrigues, M.| Nagao-Kitamoto, H.| Sugihara, K.|
Himpsl, S.D.| Bazzi, M.| Miyoshi, M.| Nishioka, T.| Hayashi, A.| Morhardt, T.L.|
Kuffa, P.| Grasberger, H.| El-Zaatari, M.| Bishu, S.| Ishii, C.| Hirayama, A.| Eaton,
K.A.| Dogan, B.| Simpson, K.W.| Inohara, N.| Mobley, H.L.T.| Kao, J.Y.| Fukuda,
S.| Barnich, N.| Kamada, N.

2020 Nature Microbiology

51116-125

Nagao-Kitamoto, H.| Leslie, J.L.| Kitamoto, S.| Jin, C.| Thomsson, K.A.| Gillilland, Interleukin-22-mediated host glycosylation prevents Clostridioides
M.G.| Kuffa, P.| Goto, Y.| Jenq, R.R.| Ishii, C.| Hirayama, A.| Seekatz, A.M.|
difficile infection by modulating the metabolic activity of the gut
Martens, E.C.| Eaton, K.A.| Kao, J.Y.| Fukuda, S.| Higgins, P.D.R.| Karlsson, N.G.| microbiota
Young, V.B.| Kamada, N.

2020 Nature Medicine

264608-617

Nanto-Hara, F.| Kanemitsu, Y.| Fukuda, S.| Kikuchi, K.| Asaji, K.| Saigusa, D.|
The guanylate cyclase C agonist linaclotide ameliorates the gut-cardioIwasaki, T.| Ho, H.-J.| Mishima, E.| Suzuki, T.| Suzuki, C.| Tsukimi, T.| Matsuhashi, renal axis in an adenine-induced mouse model of chronic kidney disease
T.| Oikawa, Y.| Akiyama, Y.| Kure, S.| Owada, Y.| Tomioka, Y.| Soga, T.| Ito, S.|
Abe, T.

2020 Nephrology Dialysis Transplantation352

250-264

Yoshino, T.| Cleary, J.M.| Van Cutsem, E.| Mayer, R.J.| Ohtsu, A.| Shinozaki, E.|
Neutropenia and survival outcomes in metastatic colorectal cancer
Falcone, A.| Yamazaki, K.| Nishina, T.| Garcia-Carbonero, R.| Komatsu, Y.| Baba, patients treated with trifluridine/tipiracil in the RECOURSE and J003
H.| Argilés, G.| Tsuji, A.| Sobrero, A.| Yamaguchi, K.| Peeters, M.| Muro, K.|
trials
Zaniboni, A.| Sugimoto, N.| Shimada, Y.| Tsuji, Y.| Hochster, H.S.| Moriwaki, T.|
Tran, B.| Esaki, T.| Hamada, C.| Tanase, T.| Benedetti, F.| Makris, L.| Yamashita, F.|
Lenz, H.-J.

2020 Annals of Oncology

31

1

88-95

Nakamura, Y.| Taniguchi, H.| Ikeda, M.| Bando, H.| Kato, K.| Morizane, C.| Esaki, Clinical utility of circulating tumor DNA sequencing in advanced
T.| Komatsu, Y.| Kawamoto, Y.| Takahashi, N.| Ueno, M.| Kagawa, Y.| Nishina, T.| gastrointestinal cancer: SCRUM-Japan GI-SCREEN and GOZILA
Kato, T.| Yamamoto, Y.| Furuse, J.| Denda, T.| Kawakami, H.| Oki, E.| Nakajima, T.| studies
Nishida, N.| Yamaguchi, K.| Yasui, H.| Goto, M.| Matsuhashi, N.| Ohtsubo, K.|
Yamazaki, K.| Tsuji, A.| Okamoto, W.| Tsuchihara, K.| Yamanaka, T.| Miki, I.|
Sakamoto, Y.| Ichiki, H.| Hata, M.| Yamashita, R.| Ohtsu, A.| Odegaard, J.I.|
Yoshino, T.

2020 Nature Medicine

26

1218591864

Yoshida, K.| Maekawa, T.| Ly, N.H.| Fujita, S.-I.| Muratani, M.| Ando, M.| Katou,
Y.| Araki, H.| Miura, F.| Shirahige, K.| Okada, M.| Ito, T.| Chatton, B.| Ishii, S.

2020 Molecular Cell

78

3445458.e62020 Gut

69

814041415

Maekawa, T.| Liu, B.| Liu, Y.| Yoshida, K.| Muratani, M.| Chatton, B.| Ishii, S.

Title
Stress-induced and ATF7-dependent epigenetic change influences
cellular senescence

Dietary l-serine confers a competitive fitness advantage toEnterobacteriaceae in the inflamed gut

ATF7-Dependent Epigenetic Changes Are Required for theIntergenerational Effect of a Paternal Low-Protein Diet

Erawijantari, P.P.| Mizutani, S.| Shiroma, H.| Shiba, S.| Nakajima, T.| Sakamoto, T.| Influence of gastrectomy for gastric cancer treatment on faecal
Saito, Y.| Fukuda, S.| Yachida, S.| Yamada, T.
microbiome and metabolome profiles

Year

JournalAuthors

Title

Year

JournalVolume Issue

Pages

Caballero-Flores, G.| Pickard, J.M.| Fukuda, S.| Inohara, N.| Núñez, G.

An Enteric Pathogen Subverts Colonization Resistance by Evading
Competition for Amino Acids in the Gut

2020 Cell Host and Microbe

284526533.e5

Nagasaka, K.| Takashima, I.| Matsuda, K.| Higo, N.

Brain activity changes in a monkey model of central post-stroke pain2020 Experimental Neurology

323

-

-

Ku, C.-C.| Wuputra, K.| Kato, K.| Lin, W.-H.| Pan, J.-B.| Tsai, S.-C.| Kuo, C.-J.| Lee, Jdp2-deficient granule cell progenitors in the cerebellum are resistant to
K.-H.| Lee, Y.-L.| Lin, Y.-C.| Saito, S.| Noguchi, M.| Nakamura, Y.| Miyoshi, H.|
ROS-mediated apoptosis through xCT/Slc7a11 activation
Eckner, R.| Nagata, K.| Wu, D.-C.| Lin, C.-S.| Yokoyama, K.K.

2020 Scientific Reports

10

1

-

Zhan, J.| Irudayam, M.J.| Nakamura, Y.| Kurita, R.| Nienhuis, A.W.

High level of fetal-globin reactivation by designed transcriptional
activator-like effector

2020 Blood Advances

44687-695

Aw, W.| Jia, H.| Lyu, W.| Fukuda, S.| Tomita, M.| Otani, L.| Kato, H.

Integrated omics profiling of dextran sodium sulfate-induced colitic mice
supplemented with Wolfberry (Lycium barbarum)

2020 npj Science of Food

4

1

-

Toju, H.| Abe, M.S.| Ishii, C.| Hori, Y.| Fujita, H.| Fukuda, S.

Scoring Species for Synthetic Community Design: Network Analyses ofFunctional Core Microbiomes

2020 Frontiers in Microbiology

11

-

-

Jangid, A.| Fukuda, S.| Seki, M.| Horiuchi, T.| Suzuki, Y.| Taylor, T.D.| Ohno, H.|
Prakash, T.

Association of colitis with gut-microbiota dysbiosis in clathrin adapter
AP-1B knockout mice2020 PLoS ONE

15

3

-

Fuseya, S.| Suzuki, R.| Okada, R.| Hagiwara, K.| Sato, T.| Narimatsu, H.| Yokoi, H.| Mice lacking core 1-derived O-glycan in podocytes develop transient
Kasahara, M.| Usui, T.| Morito, N.| Yamagata, K.| Kudo, T.| Takahashi, S.
proteinuria, resulting in focal segmental glomerulosclerosis

2020 Biochemical and Biophysical Research 523
Communications

410071013

Kato, J.| Murata, Y.| Takashima, I.| Higo, N.

Time- and area-dependent macrophage/microglial responses after focal
infarction of the macaque internal capsule2020 Neuroscience Research

-

-

-

Naya, M.| Sato, C.

Pyrene excimer-based fluorescent labeling of cysteines brought into
close proximity by protein dynamics: Asem-induced thiol-ene click
reaction for high spatial resolution clem

2020 International Journal of Molecular
Sciences

21

20

1-14

Seo, K.| Tanaka, K.| Fukuda, S.| Arakawa, K.

Complete Genome Sequences of Two Cutibacterium acnes Strains
Isolated from an Orthopedic Surgical Site

2020 Microbiology Resource
Announcements

9

17

-

Mishima, E.| Ichijo, M.| Kawabe, T.| Kikuchi, K.| Akiyama, Y.| Toyohara, T.|
Suzuki, T.| Suzuki, C.| Asao, A.| Ishii, N.| Fukuda, S.| Abe, T.

Germ-Free Conditions Modulate Host Purine Metabolism, Exacerbating
Adenine-Induced Kidney Damage

2020 Toxins

12

9

-

Ogawa, Y.| Miyoshi, C.| Obana, N.| Yajima, K.| Hotta-Hirashima, N.| Ikkyu, A.|
Kanno, S.| Soga, T.| Fukuda, S.| Yanagisawa, M.

Gut microbiota depletion by chronic antibiotic treatment alters the
sleep/wake architecture and sleep EEG power spectra in mice2020 Scientific Reports

10

1

-

Authors

Title

Year

JournalVolume Issue

Pages

Seong, K.-H.| Ly, N.H.| Katou, Y.| Yokota, N.| Nakato, R.| Murakami, S.| Hirayama, Erratum: Publisher Correction: Paternal restraint stress affects offspring
A.| Fukuda, S.| Kang, S.| Soga, T.| Shirahige, K.| Ishii, S.
metabolism via ATF-2 dependent mechanisms in Drosophilamelanogaster germ cells

2020 Communications biology

3

1

-

Yang, J.| Yang, Y.| Ishii, M.| Nagata, M.| Aw, W.| Obana, N.| Tomita, M.| Nomura, Does the gut microbiota modulate host physiology through polymicrobial
N.| Fukuda, S.
biofilms?

2020 Microbes and Environments

35

3

1-13

Fujimura, S.| Mio, K.| Kuramochi, M.| Sekiguchi, H.| Ikezaki, K.| Mio, M.|
Hengphasatporn, K.| Shigeta, Y.| Kubo, T.| Sasaki, Y.C.

2020 Journal of Physical Chemistry B

124

51

1161711624

Seong, K.-H.| Ly, N.H.| Katou, Y.| Yokota, N.| Nakato, R.| Murakami, S.| Hirayama, Paternal restraint stress affects offspring metabolism via ATF-2
A.| Fukuda, S.| Kang, S.| Soga, T.| Shirahige, K.| Ishii, S.
dependent mechanisms in Drosophila melanogaster germ cells

2020 Communications Biology

3

1

-

Inoue, H.| Shibata, S.| Ii, K.| Inoue, J.| Fukuda, S.| Arakawa, K.

Complete Genome Sequence of Bifidobacterium longum Strain Jih1,
Isolated from Human Feces

2020 Microbiology Resource
Announcements

9

22

-

Gotoh, M.| Nagasaka, K.| Nakata, M.| Takashima, I.| Yamamoto, S.

Brain Temperature Alters Contributions of Excitatory and Inhibitory
Inputs to Evoked Field Potentials in the Rat Frontal Cortex

2020 Frontiers in Cellular Neuroscience

14

-

-

Ku, C.-C.| Wuputra, K.| Kato, K.| Lin, W.-H.| Pan, J.-B.| Tsai, S.-C.| Kuo, C.-J.| Lee, Author Correction: Jdp2-deficient granule cell progenitors in the
K.-H.| Lee, Y.-L.| Lin, Y.-C.| Saito, S.| Noguchi, M.| Nakamura, Y.| Miyoshi, H.|
cerebellum are resistant to ROS-mediated apoptosis throughEckner, R.| Nagata, K.| Wu, D.-C.| Lin, C.-S.| Yokoyama, K.K.
xCT/Slc7a11 activation

2020 Scientific Reports

10

1

-

Imamoto, A.| Ki, S.| Li, L.| Iwamoto, K.| Maruthamuthu, V.| Devany, J.| Lu, O.|
Essential role of the Crk family-dosage in DiGeorge-like anomaly andKanazawa, T.| Zhang, S.| Yamada, T.| Hirayama, A.| Fukuda, S.| Suzuki, Y.| Okada, metabolic homeostasis
M.

2020 Life Science Alliance

3

2

-

Nakamura, A.| Yokoyama, Y.| Tanaka, K.| Benegiamo, G.| Hirayama, A.| Zhu, Q.| Asperuloside Improves Obesity and Type 2 Diabetes through Modulation
Kitamura, N.| Sugizaki, T.| Morimoto, K.| Itoh, H.| Fukuda, S.| Auwerx, J.| Tsubota, of Gut Microbiota and Metabolic Signaling
K.| Watanabe, M.

2020 iScience

23

9

-

Minoshima, F.| Ozaki, H.| Odaka, H.| Tateno, H.

2021 iScience

24

8

-

Bao, X.| Zhang, X.| Wang, L.| Wang, Z.| Huang, J.| Zhang, Q.| Ye, Y.| Liu, Y.| Chen, Epigenetic inactivation of ERF reactivates γ-globin expression in βD.| Zuo, Y.| Liu, Q.| Xu, P.| Huang, B.| Fang, J.| Lao, J.| Feng, X.| Li, Y.| Kurita, R.| thalassemia
Nakamura, Y.| Yu, W.| Ju, C.| Huang, C.| Mohandas, N.| Li, D.| Zhao, C.| Xu, X.

2021 American Journal of Human Genetics

1084709-721Ishii, S.| Suzuki, T.| Wakahashi, K.| Asada, N.| Kawano, Y.| Kawano, H.| Sada, A.|
Minagawa, K.| Nakamura, Y.| Mizuno, S.| Takahashi, S.| Matsui, T.| Katayama, Y.

FGF-23 from erythroblasts promotes hematopoietic progenitor
mobilization

2021 Blood

137

11

14571467

Sudo, K.| Yamazaki, S.| Wilkinson, A.C.| Nakauchi, H.| Nakamura, Y.

Polyvinyl alcohol hydrolysis rate and molecular weight influence humanand murine HSC activity ex vivo

2021 Stem Cell Research

56

-

-

Agonist and antagonist-diverted twisting motions of a single TRPV1channelIntegrated analysis of glycan and RNA in single cells

Authors

Title

Year

JournalVolume Issue

Pages

Fugazza, C.| Barbarani, G.| Elangovan, S.| Marini, M.G.| Giolitto, S.| Font-Monclus, The Coup-TFII orphan nuclear receptor is an activator of the γ-globin
I.| Marongiu, M.F.| Manunza, L.| Strouboulis, J.| Cantù, C.| Gasparri, F.| Barabino, gene
S.M.L.| Nakamura, Y.| Ottolenghi, S.| Moi, P.| Ronchi, A.E.

2021 Haematologica

1062474-482

Ohmi, Y.| Nishikaze, T.| Kitaura, Y.| Ito, T.| Yamamoto, S.| Sugiyama, F.|
Matsuyama, M.| Takahashi, Y.| Takeda, A.| Kawahara, T.| Okajima, T.| Furukawa,K.| Furukawa, K.

Majority of alpha2,6-sialylated glycans in the adult mouse brain exist in
O-glycans: SALSA-MS analysis for knockout mice of alpha2,6sialyltransferase genes

2021 Glycobiology

315

557-570

Himadewi, P.| David Wang, X.Q.| Feng, F.| Gore, H.| Liu, Y.| Yu, L.| Kurita, R.|
Nakamura, Y.| Pfeifer, G.P.| Liu, J.| Zhang, X.

3’HS1 CTCF binding site in human β-globin locus regulates fetal
hemoglobin expression

2021 eLife

10

-

-

Hasehira, K.| Furuta, T.| Shimomura, O.| Asada, M.| Oda, T.| Tateno, H.

Quantitative structural analysis of glycans expressed within tumors
derived from pancreatic cancer patient-derived xenograft mouse models

2021 Biochemical and Biophysical Research 534
Communications-

310-316

Yoshida, K.| Fujita, S.-I.| Isotani, A.| Kudo, T.| Takahashi, S.| Ikawa, M.| Shiba, D.| Intergenerational effect of short-term spaceflight in mice
Shirakawa, M.| Muratani, M.| Ishii, S.

2021 iScience

24

7

-

Furuta, T.| Oda, T.| Kiyoi, K.| Yusuke, O.| Kimura, S.| Kurimori, K.| Miyazaki, Y.|
Yu, Y.| Furuya, K.| Akashi, Y.| Shimomura, O.| Tateno, H.

Carcinoembryonic antigen as a specific glycoprotein ligand of rBC2LCN
lectin on pancreatic ductal adenocarcinoma cells

2021 Cancer Science

112

937223731

Kimura, S.| Oda, T.| Shimomura, O.| Enomoto, T.| Hashimoto, S.| Kuroda, Y.| Yu,
Y.| Kurimori, K.| Furuta, T.| Miyazaki, Y.| Tateno, H.

Novel Pancreatic Cancer Therapy Targeting Cell Surface Glycans by
Liposomes Modified with rBC2LCN Lectin

2021 European Surgical Research

61

4-5

113-122Song, D.| Zheng, Y.-W.| Hemmi, Y.| An, Y.| Noguchi, M.| Nakamura, Y.| Oda, T.|
Hayashi, Y.

Generation of human induced pluripotent stem cell lines carrying
homozygous JAG1 deletions

2021 Stem Cell Research

57

-

-

Ku, C.-C.| Wuputra, K.| Kato, K.| Pan, J.-B.| Li, C.-P.| Tsai, M.-H.| Noguchi, M.|
Nakamura, Y.| Liu, C.-J.| Chan, T.-F.| Hou, M.-F.| Wakana, S.| Wu, Y.-C.| Lin, C.S.| Wu, D.-C.| Yokoyama, K.K.

Deletion of Jdp2 enhances Slc7a11 expression in Atoh-1 positive
cerebellum granule cell progenitors in vivo

2021 Stem Cell Research and Therapy

12

1

-

Wuputra, K.| Tsai, M.-H.| Kato, K.| Yang, Y.-H.| Pan, J.-B.| Ku, C.-C.| Noguchi, M.| Dimethyl sulfoxide stimulates the AhR-Jdp2 axis to control ROS
Kishikawa, S.| Nakade, K.| Chen, H.-L.| Liu, C.-J.| Nakamura, Y.| Kuo, K.-K.| Lin, accumulation in mouse embryonic fibroblasts
Y.-C.| Chan, T.-F.| Wu, D.-C.| Hou, M.-F.| Huang, S.-K.| Lin, C.-S.| Yokoyama,
KK
Yang, Y.| Akashi, Y.| Shimomura, O.| Tateno, H.| Saito, S.| Hiemori, K.| Miyazaki, Glycan expression profile of signet ring cell gastric cancer cells andY.| Furuta, T.| Kitaguchi, D.| Kuroda, Y.| Pakavarin, L.| Oda, T.
potential applicability of rBC2LCN-targeted lectin drug conjugate
therapy2022 Cell Biology and Toxicology

382203-2222022 Gastric Cancer

25

5896-905

Borisova, E.| Nishimura, K.| An, Y.| Takami, M.| Li, J.| Song, D.| Matsuo-Takasaki, Structurally-discovered KLF4 variants accelerate and stabilize
M.| Luijkx, D.| Aizawa, S.| Kuno, A.| Sugihara, E.| Sato, T.-A.| Yumoto, F.| Terada, reprogramming to pluripotency
T.| Hisatake, K.| Hayashi, Y.

2022 iScience

25

1

-

Odaka, H.| Ozaki, H.| Tateno, H.

2022 STAR Protocols

3

1

-

scGR-seq: Integrated analysis of glycan and RNA in single cells

Authors

Title

Year

JournalVolume Issue

Pages

Kim, K.M.| Al-Zain, Y.| Yamamoto, A.| Daher, A.H.| Mansour, A.T.| AlAjlouni,
J.M.| Aloweidi, A.S.| Al-Abbadi, M.A.| Kim, H.Y.| Miyazaki, S.

Synthesis and Characterization of a Ti–Zr-Based Alloy with Ultralow
Young's Modulus and Excellent Biocompatibility

2022 Advanced Engineering Materials

24

2

-

Aizawa, S.| Nishimura, K.| Mondejar, G.S.| Kumar, A.| Bui, P.L.| Tran, Y.T.H.|
Kuno, A.| Muratani, M.| Kobayashi, S.| Nabekura, T.| Shibuya, A.| Sugihara, E.|
Sato, T.-A.| Fukuda, A.| Hayashi, Y.| Hisatake, K.

Early reactivation of clustered genes on the inactive X chromosome
during somatic cell reprogramming

2022 Stem Cell Reports

17

1

53-67

Song, D.| Takahashi, G.| Zheng, Y.-W.| Matsuo-Takasaki, M.| Li, J.| Takami, M.|
An, Y.| Hemmi, Y.| Miharada, N.| Fujioka, T.| Noguchi, M.| Nakajima, T.| Saito,
M.K.| Nakamura, Y.| Oda, T.| Miyaoka, Y.| Hayashi, Y.

Retinoids rescue ceruloplasmin secretion and alleviate oxidative stress in
Wilson's disease-specific hepatocytes

2022 Human Molecular Genetics

31

2136523671

Shimoda, Y.| Murakoshi, N.| Mori, H.| Xu, D.| Tajiri, K.| Hemmi, Y.| Sato, I.|
Noguchi, M.| Nakamura, Y.| Hayashi, Y.| Ieda, M.

Generation of a human induced pluripotent stem cell line derived from apatient with dilated cardiomyopathy carrying LMNA nonsense mutation

2022 Stem Cell Research

62

-

-

Oinam, L.| Hayashi, R.| Hiemori, K.| Kiyoi, K.| Sage-Ono, K.| Miura, K.| Ono, M.|
Tateno, H.

Quantitative evaluation of glycan-binding specificity of recombinantconcanavalin A produced in lettuce (Lactuca sativa)

2022 Biotechnology and Bioengineering

119

7

17811791

Anh, L.P.H.| Nishimura, K.| Kuno, A.| Linh, N.T.| Kato, T.| Ohtaka, M.| Nakanishi, Downregulation of Odd-Skipped Related 2, a Novel Regulator of
M.| Sugihara, E.| Sato, T.-A.| Hayashi, Y.| Fukuda, A.| Hisatake, K.
Epithelial-Mesenchymal Transition, Enables Efficient Somatic Cell
Reprogramming

2022 Stem Cells

404

397-410Ishii, T.| Nojiri, N.| Mano, Y.

2022 European Journal of Mass
Spectrometry

28

3-4

94-103A simple UPLC-MS/MS assay with a core-shell column for thedetermination of exemestane in human plasma for clinical application