Test de la saturation dans le jeu de donnée

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Les diamants représentent les comparaisons par paire dans l'ingroup

Les carrés représentent les comparaisons entre l'ingroup et l'outgroup

Axe des Y : nombre de substitutions par partition

Axe des X : pourcentage de la divergence entre séquences
Divergence nucléotidique (nombre de nucléotides divergents entre deux séquences sur un total de 872 pb)

<table><tr><td>1</td><td>FR1</td><td>1</td><td>2</td><td>3</td><td>4</td><td>5</td><td>6</td><td>7</td><td>8</td><td>9</td><td>10</td><td>11</td><td>12</td><td>13</td><td>14</td><td>15</td><td>16</td><td>17</td><td>18</td><td>19</td><td>20</td><td>21</td><td>22</td><td>23</td><td>24</td><td>25</td><td>26</td><td>27</td><td>28</td><td>29</td><td>30</td><td>31</td><td>32</td><td>33</td></tr><tr><td>2</td><td>FR3</td><td>15</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>3</td><td>FR5</td><td>16</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>4</td><td>UK3</td><td>1</td><td>16</td><td>17</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>5</td><td>UK4</td><td>15</td><td>0</td><td>1</td><td>16</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>6</td><td>Huaraz</td><td>91</td><td>93</td><td>94</td><td>92</td><td>93</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>7</td><td>Chota</td><td>89</td><td>91</td><td>92</td><td>90</td><td>91</td><td>2</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>8</td><td>Huamachuco</td><td>89</td><td>91</td><td>92</td><td>90</td><td>91</td><td>2</td><td>2</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>9</td><td>Cutervo</td><td>90</td><td>92</td><td>93</td><td>91</td><td>92</td><td>3</td><td>3</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>10</td><td>Huancabamb</td><td>89</td><td>91</td><td>92</td><td>90</td><td>91</td><td>2</td><td>2</td><td>0</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>11</td><td>Cajamarca</td><td>89</td><td>91</td><td>92</td><td>90</td><td>91</td><td>2</td><td>2</td><td>0</td><td>1</td><td>0</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>12</td><td>Contumaza</td><td>89</td><td>91</td><td>92</td><td>90</td><td>91</td><td>4</td><td>4</td><td>2</td><td>3</td><td>2</td><td>2</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>13</td><td>Cajabamba</td><td>92</td><td>93</td><td>94</td><td>93</td><td>93</td><td>17</td><td>17</td><td>15</td><td>16</td><td>15</td><td>15</td><td>17</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>14</td><td>Otuzco1</td><td>91</td><td>92</td><td>93</td><td>92</td><td>92</td><td>16</td><td>16</td><td>14</td><td>15</td><td>14</td><td>14</td><td>16</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>15</td><td>Jauja1</td><td>92</td><td>93</td><td>94</td><td>93</td><td>93</td><td>17</td><td>17</td><td>15</td><td>16</td><td>15</td><td>15</td><td>17</td><td>2</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>16</td><td>Jauja2</td><td>91</td><td>92</td><td>93</td><td>92</td><td>92</td><td>16</td><td>16</td><td>14</td><td>15</td><td>14</td><td>14</td><td>16</td><td>1</td><td>0</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>17</td><td>Huancayo</td><td>90</td><td>91</td><td>92</td><td>91</td><td>91</td><td>17</td><td>17</td><td>15</td><td>16</td><td>15</td><td>15</td><td>17</td><td>2</td><td>1</td><td>2</td><td>1</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>18</td><td>Huancaveli</td><td>92</td><td>93</td><td>94</td><td>93</td><td>93</td><td>17</td><td>17</td><td>15</td><td>16</td><td>15</td><td>15</td><td>17</td><td>2</td><td>1</td><td>2</td><td>1</td><td>2</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>19</td><td>Huasahuasi</td><td>92</td><td>93</td><td>94</td><td>93</td><td>93</td><td>16</td><td>16</td><td>14</td><td>15</td><td>14</td><td>14</td><td>16</td><td>9</td><td>8</td><td>9</td><td>8</td><td>9</td><td>9</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>20</td><td>Andahuayll</td><td>92</td><td>91</td><td>92</td><td>93</td><td>91</td><td>61</td><td>61</td><td>59</td><td>60</td><td>59</td><td>59</td><td>59</td><td>61</td><td>60</td><td>61</td><td>60</td><td>59</td><td>61</td><td>60</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>21</td><td>Abancay</td><td>90</td><td>93</td><td>94</td><td>91</td><td>93</td><td>59</td><td>58</td><td>57</td><td>56</td><td>57</td><td>57</td><td>59</td><td>60</td><td>59</td><td>60</td><td>59</td><td>58</td><td>60</td><td>57</td><td>44</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>22</td><td>Andahuayl2</td><td>85</td><td>88</td><td>89</td><td>86</td><td>88</td><td>61</td><td>62</td><td>61</td><td>60</td><td>61</td><td>61</td><td>61</td><td>64</td><td>63</td><td>64</td><td>63</td><td>62</td><td>64</td><td>61</td><td>43</td><td>23</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>23</td><td>Andahuayl4</td><td>85</td><td>88</td><td>89</td><td>86</td><td>88</td><td>61</td><td>62</td><td>61</td><td>60</td><td>61</td><td>61</td><td>61</td><td>64</td><td>63</td><td>64</td><td>63</td><td>62</td><td>64</td><td>61</td><td>43</td><td>23</td><td>0</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>24</td><td>Ayacucho</td><td>85</td><td>86</td><td>87</td><td>86</td><td>86</td><td>89</td><td>88</td><td>87</td><td>88</td><td>87</td><td>87</td><td>89</td><td>88</td><td>87</td><td>88</td><td>87</td><td>86</td><td>88</td><td>86</td><td>87</td><td>76</td><td>77</td><td>77</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>25</td><td>Cusco1</td><td>89</td><td>90</td><td>91</td><td>90</td><td>90</td><td>87</td><td>86</td><td>85</td><td>86</td><td>85</td><td>85</td><td>87</td><td>88</td><td>87</td><td>87</td><td>87</td><td>86</td><td>88</td><td>86</td><td>90</td><td>82</td><td>81</td><td>81</td><td>37</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>26</td><td>Cusco2</td><td>89</td><td>90</td><td>91</td><td>90</td><td>90</td><td>87</td><td>86</td><td>85</td><td>86</td><td>85</td><td>85</td><td>87</td><td>88</td><td>87</td><td>87</td><td>87</td><td>86</td><td>88</td><td>86</td><td>90</td><td>82</td><td>81</td><td>81</td><td>37</td><td>0</td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>27</td><td>Arapa</td><td>0</td><td>15</td><td>16</td><td>1</td><td>15</td><td>91</td><td>89</td><td>89</td><td>90</td><td>89</td><td>89</td><td>89</td><td>92</td><td>91</td><td>92</td><td>91</td><td>90</td><td>92</td><td>92</td><td>90</td><td>85</td><td>85</td><td>85</td><td>89</td><td>89</td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>28</td><td>Sicuani</td><td>0</td><td>15</td><td>16</td><td>1</td><td>15</td><td>91</td><td>89</td><td>89</td><td>90</td><td>89</td><td>89</td><td>89</td><td>92</td><td>91</td><td>92</td><td>91</td><td>90</td><td>92</td><td>92</td><td>90</td><td>85</td><td>85</td><td>85</td><td>89</td><td>89</td><td>0</td><td></td><td></td><td></td><td></td><td></td></tr><tr><td>29</td><td>Colca</td><td>16</td><td>3</td><td>4</td><td>17</td><td>3</td><td>96</td><td>94</td><td>94</td><td>95</td><td>94</td><td>94</td><td>94</td><td>95</td><td>94</td><td>95</td><td>94</td><td>93</td><td>95</td><td>95</td><td>91</td><td>93</td><td>88</td><td>88</td><td>87</td><td>89</td><td>89</td><td>16</td><td>16</td><td></td><td></td></tr><tr><td>30</td><td>Juliaca</td><td>21</td><td>23</td><td>24</td><td>22</td><td>23</td><td>93</td><td>92</td><td>91</td><td>90</td><td>91</td><td>91</td><td>91</td><td>92</td><td>91</td><td>92</td><td>91</td><td>90</td><td>92</td><td>92</td><td>94</td><td>92</td><td>85</td><td>85</td><td>88</td><td>92</td><td>92</td><td>21</td><td>21</td><td>22</td><td></td></tr><tr><td>31</td><td>Puno2</td><td>21</td><td>23</td><td>24</td><td>22</td><td>23</td><td>93</td><td>92</td><td>91</td><td>90</td><td>91</td><td>91</td><td>91</td><td>92</td><td>91</td><td>92</td><td>91</td><td>90</td><td>92</td><td>92</td><td>94</td><td>92</td><td>85</td><td>85</td><td>88</td><td>92</td><td>92</td><td>21</td><td>21</td><td>22</td><td>0</td></tr><tr><td>32</td><td>Amantani1</td><td>21</td><td>23</td><td>24</td><td>22</td><td>23</td><td>93</td><td>92</td><td>91</td><td>90</td><td>91</td><td>91</td><td>91</td><td>92</td><td>91</td><td>92</td><td>91</td><td>90</td><td>92</td><td>92</td><td>94</td><td>92</td><td>85</td><td>85</td><td>88</td><td>92</td><td>92</td><td>21</td><td>21</td><td>22</td><td>0</td></tr><tr><td>33</td><td>Puno1</td><td>44</td><td>48</td><td>49</td><td>45</td><td>48</td><td>102</td><td>101</td><td>100</td><td>101</td><td>100</td><td>100</td><td>100</td><td>99</td><td>98</td><td>98</td><td>98</td><td>97</td><td>99</td><td>101</td><td>94</td><td>94</td><td>86</td><td>86</td><td>86</td><td>88</td><td>88</td><td>44</td><td>44</td><td>47</td><td>48</td><td>48</td></tr><tr><td>34</td><td>Gmexican</td><td>126</td><td>127</td><td>128</td><td>127</td><td>127</td><td>128</td><td>128</td><td>128</td><td>127</td><td>128</td><td>128</td><td>128</td><td>127</td><td>126</td><td>126</td><td>126</td><td>125</td><td>127</td><td>127</td><td>123</td><td>119</td><td>123</td><td>123</td><td>108</td><td>121</td><td>121</td><td>126</td><td>126</td><td>124</td><td>122</td><td>122</td><td>122</td><td>130</td></tr></table>
<table><tbody><tr><td>[</td><td></td><td>111</td><td>111</td><td>111</td><td>122</td><td>222</td><td>222</td><td>223</td><td>333</td><td>333</td><td>333</td><td>444</td><td>444</td><td>444</td><td>455</td><td>555</td><td>555</td><td>556</td><td>666</td><td>666</td><td>666</td><td>777</td><td>777</td><td>777</td><td>788</td><td>888</td><td>888</td><td>889</td><td>999</td><td>999</td><td>999]</td></tr><tr><td>[</td><td>123</td><td>456</td><td>789</td><td>012</td><td>345</td><td>678</td><td>901</td><td>234</td><td>567</td><td>890</td><td>123</td><td>456</td><td>789</td><td>012</td><td>345</td><td>678</td><td>901</td><td>234</td><td>567</td><td>890</td><td>123</td><td>456</td><td>789</td><td>012</td><td>345</td><td>678</td><td>901</td><td>234</td><td>567</td><td>890</td><td>123</td><td>456</td><td>789]</td></tr><tr><td>#FR1</td><td>TTC</td><td>TTA</td><td>GGT</td><td>AAA</td><td>ATT</td><td>TTA</td><td>ATA</td><td>ATT</td><td>CAA</td><td>ATC</td><td>TCT</td><td>AGG</td><td>GGG</td><td>TTT</td><td>TTG</td><td>TTG</td><td>GTT</td><td>TTC</td><td>TAT</td><td>TAC</td><td>TCT</td><td>AAT</td><td>TCT</td><td>TCT</td><td>TTT</td><td>TTT</td><td>TCT</td><td>TTT</td><td>GAT</td><td>TCG</td><td>GTT</td><td>CAG</td><td>TAT</td></tr><tr><td>#FR3</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#FR5</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#FR7</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#FR9</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#SW</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#SP</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#NL1</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#NL2</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK1</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK2</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK3</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK4</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huaraz</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Chota</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huamachuco</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cutervo</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huancabamb</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cajamarca</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Contumaza</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cajabamba</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Otuzco1</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Jauja1</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Jauja2</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huancayo</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huancaveli</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huasahuasi</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Andahuayll</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Abancay</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Andahuayll2</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Andahuayll4</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Ayacucho</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cusco1</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cusco2</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cusco3</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Arapa</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Sicuani</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Colca</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Juliaca</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Puno2</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Puno3</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Amantani1</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Amantani2</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Amantani3</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Puno1</td><td>..T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Gmexican</td><td>C.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>G.T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr></tbody></table>
<table><tbody><tr><td>[</td><td>666</td><td>666</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777</td><td>777]</td></tr><tr><td>[</td><td>999</td><td>999</td><td>000</td><td>000</td><td>000</td><td>011</td><td>111</td><td>111</td><td>112</td><td>222</td><td>222</td><td>222</td><td>333</td><td>333</td><td>333</td><td>344</td><td>444</td><td>444</td><td>445</td><td>555</td><td>555</td><td>555</td><td>666</td><td>666</td><td>666</td><td>677</td><td>777</td><td>777</td><td>778</td><td>888</td><td>888</td><td>888</td><td>999]</td></tr><tr><td>[</td><td>456</td><td>789</td><td>012</td><td>345</td><td>678</td><td>901</td><td>234</td><td>567</td><td>890</td><td>123</td><td>456</td><td>789</td><td>012</td><td>345</td><td>678</td><td>901</td><td>234</td><td>567</td><td>890</td><td>123</td><td>456</td><td>789</td><td>012</td><td>345</td><td>678</td><td>901</td><td>234</td><td>567</td><td>890</td><td>123</td><td>456</td><td>789</td><td>012]</td></tr><tr><td>#FR1</td><td>ATT GTA</td><td>CCT</td><td>GAA</td><td>TGG</td><td>TAT</td><td>TTT</td><td>TTG</td><td>TTT</td><td>GCC</td><td>TAT</td><td>GCC</td><td>ATT</td><td>CTT</td><td>CGG</td><td>TCC</td><td>TTC</td><td>ACT</td><td>AGG</td><td>AAG</td><td>GTC</td><td>TTA</td><td>GGG</td><td>GTG</td><td>TTT</td><td>CTT</td><td>TTG</td><td>TTT</td><td>CTT</td><td>AGG</td><td>ATT</td><td>TTG</td><td>GTT</td><td></td></tr><tr><td>#FR3</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#FR5</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#FR7</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#FR9</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#SW</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#SP</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#NL1</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#NL2</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK1</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK2</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK3</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#UK4</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huaraz</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Chota</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huamachuco</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cutervo</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huancabamb</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cajamarca</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Contumaza</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cajabamba</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Otuzcol</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Jauja1</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Jauja2</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huancayo</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huancaveli</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Huasahuasi</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>A</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Andahuayll</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>T</td><td>T</td><td>...</td><td>C</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Abancay</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>A</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Andahuayl2</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Andahuayl4</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>C</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Ayacucho</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>G</td><td>A</td><td>...</td><td>T</td><td>G</td><td>A</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cusco1</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>G</td><td>A</td><td>T</td><td>...</td><td>G</td><td>A</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cusco2</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>G</td><td>A</td><td>T</td><td>...</td><td>G</td><td>A</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Cusco3</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>T</td><td>T</td><td>...</td><td>G</td><td>A</td><td>T</td><td>...</td><td>G</td><td>A</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Arapa</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Sicuani</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Colca</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Juliaca</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Puno2</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Puno3</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Amantani1</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Amantani2</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Amantani3</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Puno1</td><td>...</td><td>...</td><td>G</td><td>...</td><td>C</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr><tr><td>#Gmexican</td><td>...</td><td>...</td><td>G</td><td>A</td><td>...</td><td>...</td><td>...</td><td>T</td><td>...</td><td>T</td><td>G</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td><td>...</td></tr></tbody></table>
# ANNEXE 7

## Abréviation
**Bp** (Pb in French): Base pair.

**cytb, cytB**: cytochrome b gene that have been important as sequences for molecular phylogenetic analyses.

**cpDNA**: Chloroplast DNA.

$D_A$ (Nei *et al.*, 1983), $D_{AS}$ (Jin & Chakraborty 1994), $D_C$ (Cavalli-Sforza & Edwards, 1967) & $D_M$ (Nei, 1973) are genetic distances based on the IAM model.

**2-DGE** [2DE or 2D gel; two-dimensional (isoelectric focusing/SDS-PAGE) gel electrophoresis]: 2-DGE is used to separate the proteins by isoelectric point and then by size.

**DNA** (ADN in French): deoxyribonucleic acid. DNA is the double helix molecule of hereditary. It is composed of 4 bases: adenine (A), thymine (T), cytosine (C) and guanine (G). These bases are strung along two opposing strands, like pearls on a string. The A is always bound to T and G is always bound to C by weak hydrogen bonds. The specific order of bases is the DNA sequence.

$F_{ST}$ is the proportion of the total genetic variance contained in a subpopulation relative to the total genetic variance. Values can range from 0 to 1. High $F_{ST}$ implies a considerable degree of differentiation among populations.

$F_{IS}$ (inbreeding coefficient) is the proportion of the variance in the subpopulation contained in an individual. High $F_{IS}$ implies a considerable degree of inbreeding.

**GPS**: Global Positioning System.

**IAM** (Infinite Alleles Model): a model for the mutation process which assumes an infinite number of possible alleles at a given locus, so that any new allele arising by mutation is different from those previously present in the species, used to derive measures of genetic distance or differentiation. A major alternative is the stepwise mutation model (SMM).

**IBD**: Isolation By Distance.

**ITS** (Internal Transcribed Spacer): The ITS is a region of DNA in the DNA ribosomal repeat which flanks the 5.8S gene and is included as part of the transcription unit of the 18S-5.8S-25S
gene cluster. ITS1 is immediately upstream of the 5.8S gene and ITS2 is immediately downstream of the 5.8S gene.

**J2**: juvenile at the second stage.

**Ma, My**: Millions of years ago.

**MAT**: Mean Annual Temperature.

**ML**: maximum-likelihood

**MP**: maximum-parsimony.

**mtDNA**: mitochondrial DNA.

**NJ**: neighbor-joining.

**ND3**: NADH dehydrogenase subunit 3 gene (mitochondrial DNA).

**PCR** (Polymerase Chain Reaction): Technique for amplifying nucleic acids in a thermal cycler. Involves use of forward and reverse primer pairs that start off the reaction. End yield is many orders of magnitude more DNA of the target sequence than one started with. The resulting amplified DNA can then be visualized with stains or radioactive labeling, or sized with fluorescent markers in a sequencer.

**PPD**: Posterior Probability of the Data.

**RAPD** (Randomly amplified polymorphic DNA): A source of often polymorphic DNA fragments generated in a PCR-like reaction.

**RFLP** (pronounced 'riflip'): Restriction Fragment Length Polymorphism. A genetic marker technique using variants in the DNA exposed by cutting with restriction enzymes. Variants are visualized by running through electrophoretic gels.

**SMM** (Stepwise Mutation Model): The model which describes mutation of VNTR alleles by the loss or gain of a single tandem repeat in such a way that alleles mutate possibly towards allelic states already present in the population.

**VNTR**: Variable Number of Tandem Repeats.
RÉSUMÉ

Originaire des Andes, comme ses plantes hôtes du genre *Solanum*, le nématode à kyste de la pomme de terre (*Globodera pallida*) a été introduit accidentellement en Europe. Une approche mixte de génétique des populations et de phylogéographie a été réalisée sur cette espèce dans son berceau d'origine et secondairement dans une zone d'introduction.

Le génotypage avec 8 loci microsatellites, d'individus issus de 27 populations échantillonnées le long d'un transect de plus de 1600 Km à travers le Pérou, a permis de mettre en évidence : une forte consanguinité, que la quasi-totalité de la variabilité génétique d'une région (bassin de production de pommes de terre) se retrouve à l'échelle de la rhizosphère d'une plante, qu'une région peut être considérée comme une unique population et qu'un patron d'IBD s'observe entre populations.

L'approche phylogéographique (cytochrome B) montre que ces populations ont dispersé du sud du Pérou vers le nord. La forte divergence observée suggère une différenciation entre populations de l'ordre du million d'années. Ce scénario n'est pas compatible avec l'hypothèse d'une colonisation liée à la domestication de la pomme de terre (5000 ans). *G. pallida* aurait colonisé les Andes à partir du lac Titicaca au fur et à mesure que la montagne s'élevait en progressant vers le nord, grâce à la progression conjointe de son hôte sauvage. Puis lors de la domestication de la pomme de terre, il serait passé des *Solanum* sauvages aux cultivés à plusieurs reprises et ceci de façon indépendante.

Les populations européennes ont été identifiées comme originaire du sud du Pérou. La comparaison du patron génétique observé au Pérou et en Europe a permis d'appréhender l'impact des forces évolutives mise en jeu lors de son introduction.

Cette meilleure connaissance de la variabilité génétique des populations de nématodes et de leur origine géographique devraient permettre de mieux raisonner les méthodes de luttes contre ce ravageur majeur des cultures de pommes de terre.

ABSTRACT

"Population genetics and phylogeography of potato cyst nematode (Globodera pallida) in Peru"

The potato cyst nematode (*Globodera pallida*) is a plant parasitic nematode that was introduced in Europe but originates from the Andes, as its host (genus *Solanum*). Population genetics and phylogeography of this species were performed in its native area and secondary in an introduction area.

Individuals from 27 Peruvian populations, sampled along a 1600 Km North to South transect, were genotyped using 8 microsatellite loci. The main results were: (i) a high consanguinity, (ii) most of the genetic variability present in an agronomic region could be observed at the scale of a single plant, (iii) an agronomic region could be considered as a single population and (iv) isolation by distance pattern was observed between populations.

Using a phylogeographical approach (cytochrome B), five clades were identified and have revealed a clear expansion of populations from South to North of Peru. The 5 clades diverged far before human settlement (million years ago) indicating that *G. pallida* populations have independently made at least 5 host shifts from wild to cultivated potatoes. The estimated divergence time and the South-to-North pattern observed among the clades of *G. pallida*, a species restricted to high altitude in Peru, match to the Andean uplift that occurred firstly in southern Peru followed by mountain uplift towards the North.

This study is also the first one that identified the origin of the European populations. All the imported populations studied come from the same area in the south part of Peru. Population genetics data obtained in Europe compared to those obtained in the native area allow us to have a grasp of the evolutionary forces that take place during introduction event.

This in-depth knowledge of the genetic variability of *G. pallida* as well as the identification of the origin of the introduced populations have clear implications on the management of the resistance gene against this major pest of the potatoes.