# Generation of metabolomic-informed models of metabolism for microbial communities

Coralie Muller, Sylvain Prigent, Clémence Frioux

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## To cite this version:

Coralie Muller, Sylvain Prigent, Clémence Frioux. Generation of metabolomic-informed models of metabolism for microbial communities. JOBIM 2025 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2025, Talence, France. hal-05161904

HAL Id: hal-05161904

https://inria.hal.science/hal-05161904v1

Submitted on 15 Jul 2025

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# Generation of metabolic-informed models of metabolism for microbial communities

Coralie Muller¹,², Sylvain Prigent*²,³, Clémence Frioux*¹

* These authors contributed equally to the work

1. Inria, Univ. Bordeaux, INRAE, F-33400 Talence, France

2. Univ. Bordeaux, INRAE, UMR 1332 BFP, F-33140 Villenave d'Ornon, France

3. Bordeaux Metabolome, MetaboHUB, PHENOME-EMPHASIS, 33140 Villenave d'Ornon, France

Keywords: Systems biology -- Microbial ecology -- Metabolic modelling -- Heterogeneous data integration

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coralie.muller@inria.fr

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## References

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[3] Prigent, S., et al. « Reconstruction of 24 Penicillium Genome-scale Metabolic Models Shows Diversity Based on Their Secondary Metabolism » . Biotechnology and Bioengineering (2018)

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[9] Cao, L., et al. « MolDiscovery: Learning Mass Spectrometry Fragmentation of Small Molecules » . Nature Communications (2021)

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