Shc proteins

A Shc protein which is characterized as follows: (a) containing a C-terminal Src homology 2 (SH2) domain, a central proline-rich region (CH1), and an N-terminal phosphotyrosine binding (PTB) domain; (b) it is predominantly expressed in the adult brain; (c) it binds through its SH2 domain to proteins containing the consensus sequence pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr/Ile)-(Ile/Leu/Met/Phe/Tyr); and (d) it associates through its PTB domain with proteins containing the consensus sequence Asn-Pro-X-pTyr where X is any amino acid; nucleic acids encoding the protein; and uses of the protein. The Shc proteins mediate signaling from tyrosine kinases in the nervous system.

FIELD OF THE INVENTION 
The invention relates to novel ShcC proteins, truncations, analogs, 
homologs, and isoforms thereof; nucleic acid molecules encoding these 
proteins; and, uses of the proteins and nucleic acid molecules. 
BACKGROUND OF THE INVENTION 
The mammalian shcA gene encodes three overlapping proteins of 46, 52 and 66 
kDa, that differ only in the extent of their N-terminal sequences (1). 
These shcA gene products share a C-terminal Src homology 2 (SH2) domain, a 
central proline-rich region (CH1), and a more N-terminal 
phosphotyrosine-binding (PTB) domain (2, 3). The ShcA SH2 domain binds 
preferentially to phosphotyrosine sites with the sequence 
pTyr-(hydrophobic/Glu)-X-(Ile/Leu/Met) [SEQ ID NO:9], and recognizes 
specific autophosphorylation sites in the activated epidermal growth 
factor (EGF) and platelet-derived growth factor (PDGF)-receptors (4, 5, 
6). In contrast, the ShcA PTB domain has recently been shown to bind with 
high affinity to phosphotyrosine sites with the consensus sequence 
Leu/Ile-X-Asn-Pro-X-pTyr [SEQ ID NO:10]. Such sites are found in a number 
of growth factor receptors, notably the nerve growth factor receptor 
(Trk), and in polyoma middle T antigen (7, 8). The ShcA PTB domain, 
therefore, recognizes phosphotyrosine in the context of amino-terminal 
residues, as distinct from SH2 domains, which recognize amino acids 
C-terminal to phosphotyrosine (9). The p66 ShcA isoform, which is 
generated by alternative splicing, has an additional proline-rich 
N-terminal sequence (CH2) (Migliaccio, et. al). 
These results have indicated that ShcA proteins have two modules that bind 
phosphotyrosine sites with entirely different specificities. Potentially 
for this reason, ShcA is a prominent substrate for tyrosine 
phosphorylation in cells stimulated with a wide variety of growth factors 
and cytokines, and in lymphoid cells stimulated with antigen (10, 11, 12, 
13, 14). In addition, ShcA proteins are phosphorylated by oncogenic 
receptor and cytoplasmic tyrosine kinases (15, 16). 
The principal phosphorylation site of human ShcA phosphorylation is at Tyr 
317, located in the central CH1 region within the motif Tyr-Val-Asn-Val 
(aa 317-320 of SEQ ID NO:7, 17). A very similar element is found in mouse 
ShcA (Tyr313-Val-Asn-Ile; aa 313-316 of SEQ ID NO:6). Phosphorylation of 
this residue creates a high affinity binding site for the SH2 domain of a 
second adaptor protein, Grb2, which binds preferentially to 
phosphotyrosine sites with Asn at the +2 position (4). Grb2 is, in turn, 
associated through its SH3 domains with proline-rich motifs in the 
C-terminal tail of mSos1, a Ras guanine nucleotide exchange factor. ShcA 
phosphorylation, therefore, induces the formation of a ternary complex 
containing ShcA, Grb2 and mSos1, which may activate the Ras pathway (9). 
Consistent with this possibility, ShcA overexpression induces 
transformation of rodent fibroblasts in a fashion that is dependent on Tyr 
317 (17). ShcA overexpression also elicits Ras-dependent neurite outgrowth 
in PC12 neuronal cells (18). This latter observation suggests that the 
binding of autophosphorylated Trk to the ShcA PTB domain, and ensuing ShcA 
phosphorylation and association with Grb2, is one mechanism by which the 
Trk tyrosine kinase might activate the Ras pathway (19, 20). 
The significance of ShcA in signal transduction has been underscored by the 
identification of a Drosophila Shc protein that interacts through its PTB 
domain with the activated Drosophila EGF-receptor (21). Analysis of 
Drosophila Shc has also raised the possibility that Shc proteins have 
functions in addition to Ras activation. 
SUMMARY OF THE INVENTION 
The present inventors have identified a gene designated shcC, and they have 
characterized the shcC gene product. The shcC gene product has a 
C-terminal SH2 domain, a CH1 region with a Grb2-binding site, and an 
N-terminal PTB domain. The ShcC SH2 domain binds 
phosphotyrosine-containing peptides and receptors with a specificity 
related to, but distinct from that of the ShcA SH2 domain. ShcC was also 
shown to have a functional PTB domain. In particular, the ShcC PTB domain 
was shown to specifically associate in vitro with autophosphorylated 
receptors for nerve growth factor (NGF) and epidermal growth factor (EGF). 
In contrast to shcA, which is widely expressed, shcC RNA and proteins are 
predominantly expressed in the adult brain. These results indicate that 
ShcC mediates signalling from tyrosine kinases in the nervous system, such 
as receptors for neurotrophins. 
Isolated domains of ShcC were also shown to inhibit or revert the 
transformed phenotype of some tumors indicating that the domains have 
efficacy as therapeutic agents. In particular, studies confirmed that the 
SH2 domain of ShcC can both inhibit and revert some of the transformed 
properties resulting from overexpression of EGFR. The PTB domain of ShcC 
also showed inhibitory effects on EGFR transformation. 
The present inventors also identified a gene designated shcB which 
represents the mouse homolog of the human shcA-like gene sck. The ShcB SH2 
domain also binds to phosphotyrosine-containing peptides and receptors 
with a specificity related to, but distinct from that of the ShcA and ShcC 
SH2 domains. In contrast to ShcC, SchB is expressed at low levels in 
tissues other than the brain, such as salivary gland, uterus, ovary, and 
testis. 
Broadly stated the present invention relates to an isolated nucleic acid 
molecule comprising a sequence encoding a Shc protein which Shc protein is 
characterized as follows: (a) containing a C-terminal Src homology 2 (SH2) 
domain, a central proline-rich region (CH1), and an N-terminal 
phosphotyrosine binding (PTB) domain; (b) it is predominantly expressed in 
the adult brain; (c) it binds through its SI12 domain to proteins 
containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr or 
hydrophobic/Met/Ile)-(Ile/Leu/Met or Phe/Tyr) [SEQ ID NO:11]; and (d) it 
associates through its PTB domain with proteins containing the consensus 
sequence Asn-Pro-X-pTyr [SEQ ID NO:12] where X is any amino acid. The Shc 
proteins encoded by the nucleic acid molecule are also characterized by a 
motif comprising Tyr-Val-Asn-Thr [SEQ ID NO:13] which associates with 
Grb2. 
In accordance with an embodiment of the invention, the purified and 
isolated nucleic acid molecule comprises: 
(i) a nucleic acid sequence encoding a protein having the amino acid 
sequence shown in SEQ ID NO:4 or FIG. 19; 
(ii) nucleic acid sequences complementary to (i); or 
(iii) a nucleic acid capable of hybridizing under stringent conditions to a 
nucleic acid of (i). 
Preferably, the purified and isolated nucleic acid molecule comprises: 
(i) a nucleic acid sequence as shown in SEQ ID NO:3 or FIG. 19, wherein T 
can also be U; 
(ii) nucleic acid sequences complementary to (i), preferably complementary 
to the full length nucleic acid sequence shown in SEQ ID NO:3 or FIG. 19; 
(iii) a nucleic acid capable of hybridizing under stringent conditions to a 
nucleic acid of (i); or 
(iv) a nucleic acid molecule differing from any of the nucleic acids of (i) 
to (iii) in codon sequences due to the degeneracy of the genetic code. 
In accordance with another embodiment of the invention, an isolated nucleic 
acid molecule is provided comprising a sequence encoding ShcC with Shc 
protein is characterized as follows: (a) containing a C-terminal Src 
homology 2 (SH2) domain, a central proline-rich region (CH1), and an 
N-terminal phosphotyrosine binding (PTB) domain; (b) it is predominantly 
expressed in the adult brain; (c) it binds through its SH2 domain to 
proteins containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14]; 
and (d) it associates through its PTB domain with proteins containing the 
consensus sequence Asn-Pro-X-pTyr [SEQ ID NO:12] where X is any amino 
acid. The ShcC protein encoded by the nucleic acid is also characterized 
by a motif comprising Tyr-Val-Asn-Thr [SEQ ID NO:13] which associates with 
Grb2. 
The purified and isolated nucleic acid molecule preferably comprises: 
(i) a nucleic acid sequence encoding a protein having the amino acid 
sequence shown in SEQ ID NO:2 or FIG. 7; 
(ii) nucleic acid sequences complementary to (i); or 
(iii) a nucleic acid capable of hybridizing under stringent conditions to a 
nucleic acid of (i). 
Most preferably, the purified and isolated nucleic acid molecule comprises: 
(i) a nucleic acid sequence as shown in SEQ ID NO:1 or FIG. 6, wherein T 
can also be U; 
(ii) nucleic acid sequences complementary to (i), preferably complementary 
to the full length nucleic acid sequence shown in SEQ ID NO:1 or FIG. 6; 
(iii) a nucleic acid capable of hybridizing under stringent conditions to a 
nucleic acid of (i); or 
(iv) a nucleic acid molecule differing from any of the nucleic acids of (i) 
to (iii) in codon sequences due to the degeneracy of the genetic code. 
The invention also contemplates a nucleic acid molecule comprising a 
sequence encoding a truncation of ShcC, an analog, or a homolog of ShcC or 
a truncation thereof. (ShcC and truncations, analogs and homologs of ShcC 
are also collectively referred to herein as "ShcC protein" or "ShcC 
proteins"). 
The nucleic acid molecules of the invention may be inserted into an 
appropriate expression vector, i.e. a vector which contains the necessary 
elements for the transcription and translation of the inserted coding 
sequence. Accordingly, recombinant expression vectors adapted for 
transformation of a host cell may be constructed which comprise a nucleic 
acid molecule of the invention and one or more transcription and 
translation elements linked to the nucleic acid molecule. 
The recombinant expression vector can be used to prepare transformed host 
cells expressing a ShcC or ShcB protein. Therefore, the invention further 
provides host cells containing a recombinant molecule of the invention. 
The invention also contemplates transgenic non-human mammals whose germ 
cells and somatic cells contain a recombinant molecule comprising a 
nucleic acid molecule of the invention in particular one which encodes an 
analog of ShcC, or a truncation of ShcC. 
The invention further provides a method for preparing a novel ShcC or ShcB 
protein utilizing the purified and isolated nucleic acid molecules of the 
invention. In an embodiment a method for preparing a ShcC or ShcB protein 
is provided comprising (a) transferring a recombinant expression vector of 
the invention into a host cell; (b) selecting transformed host cells from 
untransformed host cells; (c) culturing a selected transformed host cell 
under conditions which allow expression of the ShcC protein or ShcB 
protein; and (d) isolating the ShcC protein or ShcB protein. 
The invention further broadly contemplates an isolated ShcC protein which 
is characterized as follows: (a) containing a C-terminal Src homology 2 
(SH2) domain, a central proline-rich region (CH1), and an N-terminal 
phosphotyrosine binding (PTB) domain; (b) it is predominantly expressed in 
the adult brain; (c) it binds through its SH2 domain to proteins 
containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14]; 
and (d) it associates through its PTB domain with proteins containing the 
consensus sequence Asn-Pro-X-pTyr [SEQ ID NO:12] where X is any amino 
acid. The ShcC protein is also characterized by a motif comprising 
Tyr-Val-Asn-Thr [SEQ ID NO:13] which associates with Grb2. In particular, 
the ShcC protein is characterized by its ability to bind to 
phosphotyrosine-containing peptides and receptors, and associate through 
its PTB domain in vitro with autophosphorylated receptors for nerve growth 
factor (NGF) and epidermal growth factor (EGF). In an embodiment of the 
invention, a purified ShcC protein is provided which has the amino acid 
sequence as shown in SEQ ID NO:2 or FIG. 7. The purified and isolated ShcC 
protein of the invention may be activated i.e. phosphorylated. The 
invention also includes truncations of the protein and analogs, homologs, 
and isoforms of the protein and truncations thereof. 
The invention also includes a ShcB protein having the amino acid sequence 
as shown in SEQ ID NO:4 or FIG. 19. 
The Shc proteins of the invention may be conjugated with other molecules, 
such as proteins, to prepare fusion proteins. This may be accomplished, 
for example, by the synthesis of N-terminal or C-terminal fusion proteins. 
The invention further contemplates antibodies having specificity against an 
epitope of a ShcB or ShcC protein of the invention. Antibodies may be 
labelled with a detectable substance and used to detect ShcC or ShcB 
proteins in tissues and cells. 
The invention also permits the construction of nucleotide probes which are 
unique to the nucleic acid molecules of the invention and accordingly to 
ShcC or ShcB proteins. Therefore, the invention also relates to a probe 
comprising a sequence encoding a ShcC or ShcB protein. The probe may be 
labelled, for example, with a detectable substance and it may be used to 
select from a mixture of nucleotide sequences a nucleotide sequence coding 
for a protein which displays one or more of the properties of ShcC or 
ShcB. 
The invention still further provides a method for identifying a substance 
which is capable of binding to a ShcC or ShcB protein, or an activated 
form thereof, comprising reacting a ShcC or ShcB protein or activated form 
thereof, with at least one substance which potentially can bind with the 
ShcC or ShcB protein, or activated form thereof, under conditions which 
permit the formation of complexes between the substance and ShcC or ShcB 
protein or activated form thereof, and assaying for complexes, for free 
substance, for non-complexed Shc protein, or an activated form thereof, or 
for activation of ShcC or ShcB. 
Still further the invention provides a method for assaying a medium for the 
presence of an agonist or antagonist of the interaction of a ShcC or ShcB 
protein or activated form thereof, and a substance which binds to ShcC or 
ShcB protein or activated form thereof. In an embodiment, the method 
comprises providing a known concentration of ShcC or ShcB protein, with a 
substance which is capable of binding to ShcC or ShcB protein and a 
suspected agonist or antagonist substance under conditions which permit 
the formation of complexes between the substance and ShcC or ShcB protein, 
and assaying for complexes, for free substance, for non-complexed ShcC or 
ShcB protein, or for activation of ShcC or ShcB protein. 
In an embodiment, the invention provides a method for assaying a medium for 
the presence of an agonist or antagonist of the interaction of a ShcC or 
ShcB protein or activated form thereof, and a substance which binds to 
ShcC or ShcB protein or activated form thereof comprising (a) reacting a 
ShcC or ShcB protein, or activated form thereof, a substance which binds 
to the ShcC or ShcB protein, or activated form thereof, and a test 
substance under conditions which permit the formation of complexes between 
the substance and ShcC or ShcB protein or activated form thereof; (b) 
assaying for complexes, for free substance, for non-complexed ShcC or ShcB 
protein, or for activation of ShcC or ShcB protein; and (c) comparing to a 
control in the absence of the test substance to determine if the test 
substance is an agonist or antagonist of the interaction of a ShcC or ShcB 
protein or activated form thereof, and the substance. 
Substances which affect a ShcC or ShcB protein may also be identified using 
the methods of the invention by comparing the pattern and level of 
expression of ShcC or ShcB protein of the invention in tissues and cells 
of the brain, in the presence, and in the absence of the substance. 
The invention still further provides a synthetic substance which inhibits 
the interaction between a ShcC or ShcB protein or activated form thereof, 
and a substance which binds to ShcC or ShcB protein or activated form 
thereof which is first identifed by: (a) reacting a ShcC or ShcB protein, 
or activated form thereof, a substance which binds to the ShcC or ShcB 
protein, or activated form thereof, and a test substance under conditions 
which permit the formation of complexes between the substance and ShcC or 
ShcB protein or activated form thereof; (b) assaying for complexes, for 
free substance, for non-complexed ShcC or ShcB protein, or for activation 
of ShcC or ShcB protein; and (c) identifying the synthetic substance based 
on its ability to inhibit the interaction of a ShcC or ShcB protein or 
activated form thereof, and the substance when compared to a control. 
The substances identified using the methods of the invention may be used in 
the treatment of conditions involving the perturbation of signalling 
pathways, and in particular in conditions involving perturbation of 
signalling pathways affecting the nervous system. Accordingly, the 
substances may be formulated into compositions for adminstration to 
individuals suffering from one of these conditions. Therefore, the present 
invention also relates to a composition comprising one or more of an SH2 
domain, PTB domain, and Grb2 binding site of a ShcC or ShcB protein, or a 
substance identified using the methods of the invention, and a 
pharmaceutically acceptable carrier, excipient or diluent. A method for 
treating or preventing a condition involving a ShcC or ShcB regulatory 
system is also provided comprising administering to a patient in need 
thereof, a composition of the invention. 
Other objects, features and advantages of the present invention will become 
apparent from the following detailed description. It should be understood, 
however, that the detailed description and the specific examples while 
indicating preferred embodiments of the invention are given by way of 
illustration only, since various changes and modifications within the 
spirit and scope of the invention will become apparent to those skilled in 
the art from this detailed description.

DETAILED DESCRIPTION OF THE INVENTION 
I. Nucleic Acid Molecules of the Invention 
As hereinbefore mentioned, the invention provides an isolated nucleic acid 
molecule having a sequence encoding ShcC. The term "isolated" refers to a 
nucleic acid substantially free of cellular material or culture medium 
when produced by recombinant DNA techniques, or chemical reactants, or 
other chemicals when chemically synthesized. An "isolated" nucleic acid is 
also free of sequences which naturally flank the nucleic acid (i.e., 
sequences located at the 5' and 3' ends of the nucleic acid molecule) from 
which the nucleic acid is derived. The term "nucleic acid" is intended to 
include DNA and RNA and can be either double stranded or single stranded. 
In a preferred embodiment, the nucleic acid molecule encodes ShcC having 
the amino acid sequence as shown in SEQ ID NO:2 and FIG. 7. In another 
embodiment, the nucleic acid molecule is a DNA comprising the coding 
region (bp 4 to 1428) of the nucleotide sequence as shown in SEQ ID NO:1 
and FIG. 6. 
The invention includes nucleic acid sequences complementary to the nucleic 
acid encoding ShcC having the amino acid sequence as shown in SEQ ID NO:2 
and FIG. 7, and the nucleotide sequence as shown in SEQ ID NO:1 and FIG. 
6, preferably the nucleic acid sequences complementary to the full length 
nucleic acid sequence shown in SEQ ID NO:1 and FIG. 6. 
The invention includes nucleic acid molecules having substantial sequence 
identity or homology to the nucleic acid sequence as shown in SEQ ID NO:1 
and FIG. 6, or encoding Shc proteins having substantial homology to the 
amino acid sequence shown in SEQ ID. NO. 2 and FIG. 7. Homology refers to 
sequence similarity between sequences and can be determined by comparing a 
position in each sequence which may be aligned for purposes of comparison 
(See FIG. 1 for an alignment of the amino acid sequences [SEQ ID NO:2, 
5-9] of proteins of the Shc family). When a position in the compared 
sequence is occupied by the same nucleotide base or amino acid, then the 
molecules are matching or have identical positions shared by the 
sequences. 
Isolated nucleic acid molecules encoding a protein having the activity of 
ShcC as described herein, and having a sequence which differs from the 
nucleic acid sequence shown in SEQ ID NO:1 and FIG. 6, due to degeneracy 
in the genetic code are also within the scope of the invention. Such 
nucleic acids encode functionally equivalent proteins (e.g., a protein 
having ShcC activity) but differ in sequence from the sequence of SEQ ID 
NO:1 and FIG. 6, due to degeneracy in the genetic code. As one example, 
DNA sequence polymorphisms within the nucleotide sequence of ShcC may 
result in silent mutations which do not affect the amino acid sequence. 
Variations in one or more nucleotides may exist among individuals within a 
population due to natural allelic variation. Any and all such nucleic acid 
variations are within the scope of the invention. DNA sequence 
polymorphisms may also occur which lead to changes in the amino acid 
sequence of ShcC. These amino acid polymorphisms are also within the scope 
of the present invention. 
Another aspect of the invention provides a nucleic acid molecule which 
hybridizes under stringent conditions, preferably high stringency 
conditions to a nucleic acid molecule which comprises a sequence which 
encodes ShcC having the amino acid sequence shown in SEQ ID NO:2 and FIG. 
7. Appropriate stringency conditions which promote DNA hybridization are 
known to those skilled in the art, or can be found in Current Protocols in 
Molecular Biology, John Wiley & Sons, N.Y. (1989), 6.3.1-6.3.6. For 
example, 6.0.times.sodium chloride/sodium citrate (SSC) at about 
45.degree. C., followed by a wash of 2.0.times.SSC at 50.degree. C. may be 
employed. The stringency may be selected based on the conditions used in 
the wash step. By way of example, the salt concentration in the wash step 
can be selected from a high stringency of about 0.2.times.SSC at 
50.degree. C. In addition, the temperature in the wash step can be at high 
stringency conditions, at about 65.degree. C. 
It will be appreciated that the invention includes nucleic acid molecules 
encoding truncations of ShcC, and analogs of ShcC as described herein. It 
will further be appreciated that variant forms of the nucleic acid 
molecules of the invention which arise by alternative splicing of an mRNA 
corresponding to a cDNA of the invention are encompassed by the invention. 
An isolated nucleic acid molecule of the invention which comprises DNA can 
be isolated by preparing a labelled nucleic acid probe based on all or 
part of the nucleic acid sequence shown in SEQ ID NO:1 and FIG. 6. For 
example, the probe may be based on the nucleotides encoding the CH1 region 
which correspond to about amino acids 190 to 376 in SEQ ID NO:1 and FIG. 
7; the nucleotides encoding the SH2 domain which correspond to about amino 
acids 377 to 472 in SEQ ID NO:1 and FIG. 7; and the nucleotides encoding 
the PTB domain which correspond to about amino acids 29 to 189 in SEQ ID 
NO:1 and FIG. 7. The labelled nucleic acid probe is used to screen an 
appropriate DNA library (e.g. a cDNA or genomic DNA library). For example, 
a cDNA library can be used to isolate a cDNA encoding a protein having 
ShcC activity by screening the library with the labelled probe using 
standard techniques. Alternatively, a genomic DNA library can be similarly 
screened to isolate a genomic clone encompassing a gene encoding a protein 
having ShcC activity. Nucleic acids isolated by screening of a cDNA or 
genomic DNA library can be sequenced by standard techniques. 
An isolated nucleic acid molecule of the invention which is DNA can also be 
isolated by selectively amplifying a nucleic acid encoding ShcC using the 
polymerase chain reaction (PCR) methods and cDNA or genomic DNA. It is 
possible to design synthetic oligonucleotide primers from the nucleotide 
sequence shown in SEQ ID NO:1 for use in PCR. A nucleic acid can be 
amplified from cDNA or genomic DNA using these oligonucleotide primers and 
standard PCR amplification techniques. The nucleic acid so amplified can 
be cloned into an appropriate vector and characterized by DNA sequence 
analysis. cDNA may be prepared from mRNA, by isolating total cellular mRNA 
by a variety of techniques, for example, by using the 
guanidinium-thiocyanate extraction procedure of Chirgwin et al., 
Biochemistry, 18, 5294-5299 (1979). cDNA is then synthesized from the mRNA 
using reverse transcriptase (for example, Moloney MLV reverse 
transcriptase available from Gibco/BRL, Bethesda, Md., or AMV reverse 
transcriptase available from Seikagaku America, Inc., St. Petersburg, 
Fla.). 
An isolated nucleic acid molecule of the invention which is RNA can be 
isolated by cloning a cDNA encoding ShcC into an appropriate vector which 
allows for transcription of the cDNA to produce an RNA molecule which 
encodes a protein which exhibits ShcC activity. For example, a cDNA can be 
cloned downstream of a bacteriophage promoter, (e.g. a T7 promoter) in a 
vector, cDNA can be transcribed in vitro with T7 polymerase, and the 
resultant RNA can be isolated by conventional techniques. 
Nucleic acid molecules of the invention may be chemically synthesized using 
standard techniques. Methods of chemically synthesizing 
polydeoxynucleotides are known, including but not limited to solid-phase 
synthesis which, like peptide synthesis, has been fully automated in 
commercially available DNA synthesizers (See e.g., Itakura et al. U.S. 
Pat. No. 4,598,049; Caruthers et al. U.S. Pat. No. 4,458,066; and Itakura 
U.S. Pat. Nos. 4,401,796 and 4,373,071). 
Determination of whether a particular nucleic acid molecule encodes a 
protein having ShcC activity can be accomplished by expressing the cDNA in 
an appropriate host cell by standard techniques, and testing the ability 
of the expressed protein to bind to proteins containing the consensus 
sequence pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ 
ID NO:14], and to associate with proteins containing the consensus 
sequence Asn-Pro-X-pTyr [SEQ ID NO:12]. A cDNA having the biological 
activity of ShcC can be sequenced by standard techniques, such as 
dideoxynucleotide chain termination or Maxam-Gilbert chemical sequencing, 
to determine the nucleic acid sequence and the predicted amino acid 
sequence of the encoded protein. 
The initiation codon and untranslated sequences of a ShcC protein may be 
determined using computer software designed for the purpose, such as 
PC/Gene (IntelliGenetics Inc., Calif.). The intron-exon structure and the 
transcription regulatory sequences of the gene encoding a ShcC protein may 
be identified by using a nucleic acid molecule of the invention encoding 
ShcC to probe a genomic DNA clone library. Regulatory elements can be 
identified using standard techniques. The function of the elements can be 
confirmed by using these elements to express a reporter gene such as the 
lacZ gene which is operatively linked to the elements. These constructs 
may be introduced into cultured cells using conventional procedures or 
into non-human transgenic animal models. In addition to identifying 
regulatory elements in DNA, such constructs may also be used to identify 
nuclear proteins interacting with the elements, using techniques known in 
the art. 
The sequence of a nucleic acid molecule of the invention may be inverted 
relative to its normal presentation for transcription to produce an 
antisense nucleic acid molecule. An antisense nucleic acid molecule may be 
constructed using chemical synthesis and enzymatic ligation reactions 
using procedures known in the art. 
II. ShcC Proteins of the Invention 
ShcC proteins are predominantly expressed in the adult brain. ShcC proteins 
are also characterized by their ability to bind through their SH2 domains 
to proteins containing the consensus sequence 
pTyr-(hydrophobic/Glu)-hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14]. 
Examples of proteins containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14] 
include EGF and PDGF. ShcC proteins also associated through their PTB 
domain with proteins containing the consensus sequence Asn-Pro-X-pTyr [SEQ 
ID NO:12] where X is any amino acid. In particular, ShcC associates in 
vitro with autophosphorylated receptors for nerve growth factor (NGF) and 
EGF. 
The amino acid sequence of ShcC is shown in SEQ. ID NO. 2 or in FIG. 7. 
ShcC contains a number of well-characterized regions including a carboxy 
terminal src homology 2 (SH2) domain (amino acids 377 to 472) containing 
the sequence GDFLVR which is highly conserved among SH2 domains; a 
phosphotyrosine binding domain (amino acids 29 to 189); and a central 
proline-rich region (CH1) (amino acids 190 to 376) containing a Grb2 
binding site (Tyr-Val-Asn-Thr), SEQ ID NO:13. 
In addition to the full length ShcC amino acid sequence (SEQ. ID. NO:2), 
the proteins of the present invention include truncations of ShcC, and 
analogs, and homologs of ShcC and truncations thereof as described herein. 
Truncated proteins may comprise peptides of between 3 and 450 amino acid 
residues, ranging in size from a tripeptide to a 450 mer polypeptide. For 
example, a truncated protein may comprise the SH2 domain (amino acids 377 
to 472); the PTB domain (amino acids 29 to 189); or the CH1 region (amino 
acids 190to376). 
The truncated proteins may have an amino group (--NH2), a hydrophobic group 
(for example, carbobenzoxyl, dansyl, or T-butyloxycarbonyl), an acetyl 
group, a 9-fluorenylmethoxy-carbonyl (PMOC) group, or a macromolecule 
including but not limited to lipid-fatty acid conjugates, polyethylene 
glycol, or carbohydrates at the amino terminal end. The truncated proteins 
may have a carboxyl group, an amido group, a T-butyloxycarbonyl group, or 
a macromolecule including but not limited to lipid-fatty acid conjugates, 
polyethylene glycol, or carbohydrates at the carboxy terminal end. 
The proteins of the invention may also include analogs of ShcC as shown in 
SEQ. ID. NO. 2, and/or truncations thereof as described herein, which may 
include, but are not limited to ShcC (SEQ. ID. NO. 2), containing one or 
more amino acid substitutions, insertions, and/or deletions. Amino acid 
substitutions may be of a conserved or non-conserved nature. Conserved 
amino acid substitutions involve replacing one or more amino acids of the 
ShcC amino acid sequence with amino acids of similar charge, size, and/or 
hydrophobicity characteristics. When only conserved substitutions are made 
the resulting analog should be functionally equivalent to ShcC (SEQ. ID. 
NO. 2). Non-conserved substitutions involve replacing one or more amino 
acids of the ShcC amino acid sequence with one or more amino acids which 
possess dissimilar charge, size, and/or hydrophobicity characteristics. By 
way of example, Tyr 304 may be replaced to create an analog which does not 
bind to the adaptor protein Grb2. 
One or more amino acid insertions may be introduced into ShcC (SEQ. ID. NO. 
2). Amino acid insertions may consist of single amino acid residues or 
sequential amino acids ranging from 2 to 15 amino acids in length. For 
example, amino acid insertions may be used to destroy the PTB domain 
sequences so that ShcC can no longer bind proteins containing the 
consensus sequence Asn-Pro-X-pTyr [SEQ ID NO:12]. 
Deletions may consist of the removal of one or more amino acids, or 
discrete portions (e.g. one or more of the SH2 domain, PTB domain, and CH1 
region) from the ShcC (SEQ. ID. NO. 2) sequence. The deleted amino acids 
may or may not be contiguous. The lower limit length of the resulting 
analog with a deletion mutation is about 10 amino acids, preferably 100 
amino acids. 
It is anticipated that if amino acids are replaced, inserted or deleted in 
sequences outside the carboxy terminal src homology 2 (SH2) domain and the 
phosphotyrosine binding (PTB) domain, and the motif corresponding to the 
Crb2-binding site in the central CH1 region that the resulting ShcC 
protein will bind to proteins containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14] 
and associate with proteins containing the consensus sequence 
Asn-Pro-X-pTyr [SEQ ID NO:12]. 
The proteins of the invention also include homologs of ShcC (SEQ. ID. NO. 
2) and/or truncations thereof as described herein. Such ShcC homologs 
include proteins whose amino acid sequences are comprised of the amino 
acid sequences of ShcC regions from other species that hybridize under 
stringent hybridization conditions (see discussion of stringent 
hybridization conditions herein) with a probe used to obtain ShcC. These 
homologs will generally have the same regions which are characteristic of 
ShcC, namely a carboxy terminal SH2 domain, a PTB domain and a motif 
corresponding to the Grb2-binding site in a central CH1 region. It is 
anticipated that, outside of the well-characterized regions of ShcC 
specified herein (i.e. SH2 domain, PTB domain etc), a protein comprising 
an amino acid sequence which is about 40% similar, preferably 50 to 60% 
similar, with the amino acid sequence shown in SEQ ID NO:2 will exhibit 
Shc C activity. 
The invention also contemplates isoforms of the protein of the invention. 
An isoform contains the same number and kinds of amino acids as the 
protein of the invention, but the isoform has a different molecular 
structure. The isoforms contemplated by the present invention are those 
having the same properties as the protein of the invention as described 
herein. 
The present invention also includes ShcC protein conjugated with a selected 
protein, or a selectable marker protein (see below) to produce fusion 
proteins. Further, the present invention also includes activated i.e. 
phosphorylated ShcC proteins of the invention. Additionally, immunogenic 
portions of ShcC and ShcC related proteins are within the scope of the 
invention. 
The ShcC proteins of the invention may be prepared using recombinant DNA 
methods. Accordingly, the nucleic acid molecules of the present invention 
having a sequence which encodes a ShcC protein of the invention may be 
incorporated in a known manner into an appropriate expression vector which 
ensures good expression of the protein. Possible expression vectors 
include but are not limited to cosmids, plasmids, or modified viruses 
(e.g. replication defective retroviruses, adenoviruses and 
adeno-associated viruses), so long as the vector is compatible with the 
host cell used. 
The invention therefore contemplates a recombinant expression vector of the 
invention containing a nucleic acid molecule of the invention, and the 
necessary regulatory sequences for the transcription and translation of 
the inserted protein-sequence. Suitable regulatory sequences may be 
derived from a variety of sources, including bacterial, fungal, viral, 
mammalian, or insect genes (For example, see the regulatory sequences 
described in Goeddel, Gene Expression Technology: Methods in Enzymology 
185, Academic Press, San Diego, Calif. (1990). Selection of appropriate 
regulatory sequences is dependent on the host cell chosen as discussed 
below, and may be readily accomplished by one of ordinary skill in the 
art. The necessary regulatory sequences may be supplied by the native ShcC 
and/or its flanking regions. 
The invention further provides a recombinant expression vector comprising a 
DNA nucleic acid molecule of the invention cloned into the expression 
vector in an antisense orientation. That is, the DNA molecule is linked to 
a regulatory sequence in a manner which allows for expression, by 
transcription of the DNA molecule, of an RNA molecule which is antisense 
to the nucleotide sequence of SEQ ID NO:1. Regulatory sequences linked to 
the antisense nucleic acid can be chosen which direct the continuous 
expression of the antisense RNA molecule in a variety of cell types, for 
instance a viral promoter and/or enhancer, or regulatory sequences can be 
chosen which direct tissue or cell type specific expression of antisense 
RNA. 
The recombinant expression vectors of the invention may also contain a 
selectable marker gene which facilitates the selection of host cells 
transformed or transfected with a recombinant molecule of the invention. 
Examples of selectable marker genes are genes encoding a protein such as 
G418 and hygromycin which confer resistance to certain drugs, 
.beta.-galactosidase, chloramphenicol acetyltransferase, firefly 
luciferase, or an immunoglobulin or portion thereof such as the Fc portion 
of an immunoglobulin preferably IgG. The selectable markers can be 
introduced on a separate vector from the nucleic acid of interest. 
The recombinant expression vectors may also contain genes which encode a 
fusion moiety which provides increased expression of the recombinant 
protein; increased solubility of the recombinant protein; and aid in the 
purification of the target recombinant protein by acting as a ligand in 
affinity purification. For example, a proteolytic cleavage site may be 
added to the target recombinant protein to allow separation of the 
recombinant protein from the fusion moiety subsequent to purification of 
the fusion protein. Typical fusion expression vectors include pGEX (Amrad 
Corp., Melbourne, Australia), pMAL (New England Biolabs, Beverly, Mass.) 
and pRIT5 (Pharmacia, Piscataway, N.J.) which fuse glutathione 
S-transferase (GST), maltose E binding protein, or protein A, 
respectively, to the recombinant protein. 
The recombinant expression vectors may be introduced into host cells to 
produce a transformant host cell. "Transformant host cells" include host 
cells which have been transformed or transfected with a recombinant 
expression vector of the invention. The terms "transformed with", 
"transfected with", "transformation" and "transfection" encompass the 
introduction of nucleic acid (e.g. a vector) into a cell by one of many 
standard techniques. Prokaryotic cells can be transformed with nucleic 
acid by, for example, electroporation or calcium-chloride mediated 
transformation. Nucleic acid can be introduced into mammalian cells via 
conventional techniques such as calcium phosphate or calcium chloride 
co-precipitation, DEAE-dextran-mediated transfection, lipofectin, 
electroporation or microinjection. Suitable methods for transforming and 
transfecting host cells can be found in Sambrook et al. (Molecular 
Cloning: A Laboratory Manual, 2nd Edition, Cold Spring Harbor Laboratory 
press (1989)), and other laboratory textbooks. 
Suitable host cells include a wide variety of prokaryotic and eukaryotic 
host cells. For example, the proteins of the invention may be expressed in 
bacterial cells such as E. coli, insect cells (using baculovirus), yeast 
cells or mammalian cells. Other suitable host cells can be found in 
Goeddel, Gene Expression Technology: Methods in Enzymology 185, Academic 
Press, San Diego, Calif. (1991). 
Alternatively, the proteins of the invention may also be expressed in 
non-human transgenic animals such as, rats, rabbits, sheep and pigs (see 
Hammer et al. (Nature 315:680-683, 1985), Palmiter et al. (Science 
222:809-814, 1983), Brinster et al. (Proc Natl. Acad. Sci USA 82:44384442, 
1985), Palmiter and Brinster (Cell. 41:343-345, 1985) and U.S. Pat. No. 
4,736,866). 
The proteins of the invention may also be prepared by chemical synthesis 
using techniques well known in the chemistry of proteins such as solid 
phase synthesis (Merrifield, 1964, J. Am. Chem. Assoc. 85:2149-2154) or 
synthesis in homogenous solution (Houbenweyl, 1987, Methods of Organic 
Chemistry, ed. E. Wansch, Vol. 15 I and II, Thieme, Stuttgart). 
N-terminal or C-terminal fusion proteins comprising a ShcC protein of the 
invention conjugated with other molecules, such as proteins may be 
prepared by fusing, through recombinant techniques, the N-terminal or 
C-terminal of a ShcC protein, and the sequence of a selected protein or 
selectable marker protein with a desired biological function. The 
resultant fusion proteins contain ShcC protein fused to the selected 
protein or marker protein as described herein. Examples of proteins which 
may be used to prepare fusion proteins include immunoglobulins, 
glutathione-S-transferase (GST), hemagglutinin (HA), and truncated myc. 
The present inventors have made GST fusion proteins containing the SH2 
domain and PTB domain of ShcC (See Example 1). 
Phosphorylated or activated ShcC proteins of the invention may be prepared 
using the method described in Reedijk et al. (The EMBO Journal 11(4):1365, 
1992). For example, tyrosine phosphorylation may be induced by infecting 
bacteria harbouring a plasmid containing a nucleotide sequence of the 
invention or fragment thereof, with a .lambda.gt11 bacteriophage encoding 
the cytoplasmic domain of the Elk tyrosine kinase as a LacZ-Elk fusion. 
Bacteria containing the plasmid and bacteriophage as a lysogen are 
isolated. Following induction of the lysogen, the expressed peptide 
becomes phosphorylated by the Elk tyrosine kinase. 
III. Nucleotide Probes 
The nucleic acid molecules of the invention allow those skllled in the art 
to construct nucleotide probes for use in the detection of nucleic acid 
sequences in biological materials. Suitable probes include nucleic acid 
molecules based on nucleic acid sequences encoding at least 6 sequential 
amino acids from regions of the ShcC protein as shown in SEQ. ID NO:2, 
FIG. 2(A) and FIG. 7. For example, a probe may be based on the nucleotides 
encoding the SH2 domain, CH1 region, or PTB domain of ShcC. A nucleotide 
probe may be labelled with a detectable substance such as a radioactive 
label which provides for an adequate signal and has sufficient half-life 
such as .sup.32 P, .sup.3 H, .sup.14 C or the like. Other detectable 
substances which may be used include antigens that are recognized by a 
specific labelled antibody, fluorescent compounds, enzymes, antibodies 
specific for a labelled antigen, and luminescent compounds. An appropriate 
label may be selected having regard to the rate of hybridization and 
binding of the probe to the nucleotide to be detected and the amount of 
nucleotide available for hybridization. Labelled probes may be hybridized 
to nucleic acids on solid supports such as nitrocellulose filters or nylon 
membranes as generally described in Sambrook et al, 1989, Molecular 
Cloning, A Laboratory Manual (2nd ed.). The nucleic acid probes may be 
used to detect genes, preferably in human cells, that encode ShcC 
proteins. The nucleotide probes may also be useful in the diagnosis of 
disorders of the nervous system. 
IV. Antibodies 
ShcC proteins of the invention can be used to prepare antibodies specific 
for the proteins. Antibodies can be prepared which bind a distinct epitope 
in an unconserved region of the protein. An unconserved region of the 
protein is one which does not have substantial sequence homology to other 
proteins, for example the regions outside the SH2 and PTB domains of ShcC 
as described herein. A region from one of the well-characterized domains 
(e.g. SH2 domain) can be used to prepare an antibody to a conserved region 
of a ShcC protein. Antibodies having specificity for a ShcC protein may 
also be raised from fusion proteins created by expressing fusion proteins 
in bacteria as described herein. 
Conventional methods can be used to prepare the antibodies. For example, by 
using a peptide of a ShcC protein, polyclonal antisera or monoclonal 
antibodies can be made using standard methods. A mammal, (e.g., a mouse, 
hamster, or rabbit) can be immunized with an immunogenic form of the 
peptide which elicits an antibody response in the mammal. Techniques for 
conferring immunogenicity on a peptide include conjugation to carriers or 
other techniques well known in the art. For example, the peptide can be 
administered in the presence of adjuvant. The progress of immunization can 
be monitored by detection of antibody titers in plasma or serum. Standard 
ELISA or other immunoassay procedures can be used with the immunogen as 
antigen to assess the levels of antibodies. Following immunization, 
antisera can be obtained and, if desired, polyclonal antibodies isolated 
from the sera. 
To produce monoclonal antibodies, antibody producing cells (lymphocytes) 
can be harvested from an immunized animal and fused with myeloma cells by 
standard somatic cell fusion procedures thus immortalizing these cells and 
yielding hybridoma cells. Such techniques are well known in the art, 
[e.g., the hybridoma technique originally developed by Kohler and Milstein 
(Nature 256, 495-497 (1975)) as well as other techniques such as the human 
B-cell hybridoma technique (Kozbor et al., Immunol. Today 4, 72 (1983)), 
the EBV-hybridoma technique to produce human monoclonal antibodies (Cole 
et al. Monoclonal Antibodies in Cancer Therapy (1985) Allen R. Bliss, 
Inc., pages 77-96), and screening of combinatorial antibody libraries 
(Huse et al., Science 246, 1275 (1989)]. Hybridoma cells can be screened 
immunochemically for production of antibodies specifically reactive with 
the peptide and the monoclonal antibodies can be isolated. Therefore, the 
invention also contemplates hybridoma cells secreting monoclonal 
antibodies with specificity for a ShcC protein as described herein. 
The term "antibody" includes antibody fragments which also specifically 
react with a protein, or peptide having the activity of ShcC. Antibodies 
can be fragmented using conventional techniques and the fragments screened 
for utility as described above. For example, F(ab').sub.2 fragments can be 
generated by treating antibody with pepsin. The resulting F(ab').sub.2 
fragment may be treated to reduce disulfide bridges to produce Fab' 
fragments. 
Chimeric antibody derivatives, i.e., antibody molecules that combine a 
non-human animal variable region and a human constant region are also 
within the scope of the invention. Chimeric antibody molecules include, 
for example, the antigen binding domain from an antibody of a mouse, rat, 
or other species, with human constant regions. Standard methods may be 
used to make chimeric antibodies containing the immunoglobulin variable 
region which recognizes the gene product of ShcC antigens of the invention 
(See, for example, Morrison et al., Proc. Natl Acad. Sci. U.S.A. 81,6851 
(1985); Takeda et al., Nature 314, 452 (1985), Cabilly et al., U.S. Pat. 
No. 4,816,567; Boss et al., U.S. Pat. No. 4,816,397; Tanaguchi et al., 
European Patent Publication EP171496; European Patent Publication 0173494, 
United Kingdom patent GB 2177096B). It is expected that chimeric 
antibodies would be less immunogenic in a human subject than the 
corresponding non-chimeric antibody. 
Monoclonal or chimeric antibodies specifically reactive with a ShcC protein 
of the invention may be further humanized by producing human constant 
region chimeras, in which parts of the variable regions, particularly the 
conserved framework regions of the antigen-binding domain, are of human 
origin and only the hypervariable regions are of non-human origin. Such 
immunoglobulin molecules may be made by techniques known in the art, 
(e.g., Teng et al., Proc. Natl. Acad. Sci. U.S.A., 80, 7308-7312 (1983); 
Kozbor et al., Immunology Today, 4, 7279 (1983); Olsson et al., Meth. 
Enzymol., 92, 3-16 (1982)), and PCT Publication WO92/06193 or EP 0239400). 
Humanized antibodies can also be commercially produced (Scotgen Limited, 2 
Holly Road, Twickenham, Middlesex, Great Britain.) 
Specific antibodies, or antibody fragments, reactive against ShcC proteins 
of the invention may also be prepared by screening expression libraries 
encoding immunoglobulin genes, or portions thereof, expressed in bacteria 
with peptides produced from the nucleic acid molecules of the present 
invention. For example, complete Fab fragments, VH regions and FV regions 
can be expressed in bacteria using phage expression libraries (See for 
example Ward et al., Nature 341, 544-546: (1989); Huse et al., Science 
246, 1275-1281 (1989); and McCafferty et al. Nature 348, 552-554 (1990)). 
Alternatively, a SCID-hu mouse, for example the model developed by 
Genpharm, can be used to produce antibodies, or fragments thereof. 
Antibodies specifically reactive with a ShcC protein, or derivatives, such 
as enzyme conjugates or labeled derivatives, may be used to detect ShcC 
proteins in various biological materials, for example they may be used in 
any known immunoassays which rely on the binding interaction between an 
antigenic determinant of a ShcC protein and the antibodies. Examples of 
such assays are radioimmunoassays, enzyme immunoassays (e.g. ELISA), 
immunofluorescence, immunoprecipitation, latex agglutination, 
hemagglutination, and histochemical tests. The antibodies may be used to 
detect and quantify ShcC protein in a sample in order to determine its 
role in particular cellular events or pathological states, and to diagnose 
and treat such pathological states. 
In particular, the antibodies of the invention may be used in 
immuno-histochemical analyses, for example, at the cellular and 
sub-subcellular level, to detect ShcC, to localise it to particular cells 
and tissues in the brain and to specific subcellular locations, and to 
quantitate the level of expression. 
Cytochemical techniques known in the art for localizing antigens using 
light and electron microscopy may be used to detect a ShcC protein. 
Generally, an antibody of the invention may be labelled with a detectable 
substance and ShcC may be localised in tissues and cells based upon the 
presence of the detectable substance. Examples of detectable substances 
include various enzymes such as biotin, alkaline phosphatase, 
.beta.-galactosidase, or acetylcholinesterase; fluorescent materials such 
as fluorescein; luminescent materials such as luminol; and, radioactive 
materials such as radioactive iodine I.sup.125, I.sup.131 or tritium. 
Antibodies may also be coupled to electron dense substances, such as 
ferritin or colloidal gold, which are readily visualised by electron 
microscopy. 
Indirect methods may also be employed in which the primary antigen-antibody 
reaction is amplified by the introduction of a second antibody, having 
specificity for the antibody reactive against ShcC. By way of example, if 
the antibody having specificity against ShcC is a rabbit IgG antibody, the 
second antibody may be goat anti-rabbit gamma-globulin labelled with a 
detectable substance as described herein. 
Where a radioactive label is used as a detectable substance, ShcC may be 
localized by radioautography. The results of radioautography may be 
quantitated by determining the density of particles in the radioautographs 
by various optical methods, or by counting the grains. 
V. Utility of the Nucleic Acid Molecules and Proteins of the Invention 
As discussed herein, ShcC is predominantly expressed in the adult brain and 
is characterized by its ability to bind through its SH2 domain to 
phosphotyrosine-containing peptides and receptors, and associate through 
its PTB domain in vitro with autophosphorylated receptors for nerve growth 
factor (NGF) and epidermal growth factor (EGF). Therefore, ShcC has a role 
in regulating proliferation, differentiation, activation and metabolism of 
cells of the nervous system. Therefore, the above described methods for 
detecting nucleic acid molecules of the invention and ShcC proteins, can 
be used to monitor proliferation, differentiation, activation and 
metabolism of cells of the nervous system by detecting and localizing ShcC 
proteins and nucleic acid molecules encoding ShcC proteins. It would also 
be apparent to one skilled in the art that the above described methods may 
be used to study the developmental expression of ShcC and, accordingly, 
will provide further insight into the role of ShcC in the nervous system. 
The finding that ShcC has an important role in the regulation of signalling 
pathways that control gene expression, cell proliferation, 
differentiation, activation, and metabolism in the nervous system permits 
the identification of substances which affect ShcC regulatory systems and 
which may be used in the treatment of conditions involving perturbation of 
signalling pathways. The term "ShcC regulatory system" refers to the 
interaction of a ShcC protein and or a part or activated form thereof, 
with proteins containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14], 
including EGF and PDGF; proteins containing the consensus sequence 
Asn-Pro-X-pTyr [SEQ ID NO:12] where X is any amino acid, including NGF and 
Trk; and, adaptor proteins such as Grb2 through association with 
particular motifs of ShcC (i.e. YYNS (aa 221 to 224 of SEQ ID NO:2) and 
YVNT [SEQ ID NO:13]), to form complexes thereby activating a series of 
regulatory pathways that control gene expression, cell division, 
cytoskeletal architecture and cell metabolism particularly in the nervous 
system. Such pathways include the Ras pathway, the pathway that regulates 
the breakdown of polyphosphoinositides through phospholipase C, and 
PI-3-kinase activated pathways. 
Substances which affect a ShcC regulatory system include substances 
comprising or consisting of the SH2 domain, PTB domain, and/or Grb2 
binding site of SchC, or comprising or consisting of one or more of the 
consensus sequences 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14], 
and Asn-Pro-X-pTyr. A substance which affects a ShcC regulatory system may 
also be identified using the above described methods for detecting nucleic 
acid molecules and ShcC proteins, and by comparing the pattern and level 
of expression of ShcC proteins in the presence and absence of the 
substance. 
Further, substances which affect a ShcC regulatory system can be identified 
based on their ability to bind to the ShcC protein or the activated ShcC 
protein. Therefore, the invention also provides methods for identifying 
substances which are capable of binding to a ShcC protein or an activated 
ShcC protein. In particular, the methods may be used to identify 
substances which are capable of binding to the SH2 and PTB domains of ShcC 
proteins, including proteins containing the consensus sequence 
pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ ID NO:14] 
and proteins containing the consensus sequence Asn-Pro-X-pTyr [SEQ ID 
NO:12]. Substances which, bind to an activated ShcC protein such as a ShcC 
protein having a phosphorylated tyrosine in the Grb2-binding site may also 
be identified. The substances identified using the methods of the 
invention may be isolated, cloned and sequenced using conventional 
techniques. 
Substances which can bind with ShcC proteins or activated ShcC proteins may 
be identified by reacting a ShcC protein with a substance which 
potentially binds to the ShcC protein or activated ShcC protein, under 
conditions which permit the formation of substance-ShcC protein complexes 
and assaying for substance-ShcC protein complexes, for free substance, or 
for non-complexed ShcC protein or activated ShcC protein, or for 
activation of ShcC protein. Conditions which permit the formation of 
substance-ShcC protein complexes may be selected having regard to factors 
such as the nature and amounts of the substance and the protein. 
The substance-protein complex, free substance or non-complexed proteins may 
be isolated by conventional isolation techniques, for example, salting 
out, chromatography, electrophoresis, gel filtration, fractionation, 
absorption, polyacrylamide gel electrophoresis, agglutination, or 
combinations thereof. To facilitate the assay of the components, antibody 
against ShcC protein or the substance, or labelled ShcC protein, or a 
labelled substance may be utilized. The antibodies, proteins, or 
substances may be labelled with a detectable substance as described above. 
Substances which bind to a ShcC protein of the invention may be identified 
by assaying for activation of the ShcC protein i.e. by assaying for 
phosphorylation of the tyrosine residues of the protein. 
ShcC protein, or the substance used in the method of the invention may be 
insolubilized. For example, a ShcC protein or substance may be bound to a 
suitable carrier such as agarose, cellulose, dextran, Sephadex, Sepharose, 
carboxymethyl cellulose polystyrene, filter paper, ion-exchange resin, 
plastic film, plastic tube, glass beads, polyamine-methyl 
vinyl-ether-maleic acid copolymer, amino acid copolymer, ethylene-maleic 
acid copolymer, nylon, silk, etc. The carrier may be in the shape of, for 
example, a tube, test plate, beads, disc, sphere etc. The insolubilized 
protein or substance may be prepared by reacting the material with a 
suitable insoluble carrier using known chemical or physical methods, for 
example, cyanogen bromide coupling. 
The invention also contemplates a method for assaying for an agonist or 
antagonist of the binding of a ShcC protein or activated ShcC protein with 
a substance which is capable of binding with ShcC protein or activated 
ShcC protein. The agonist or antagonist may be an endogenous physiological 
substance or it may be a natural or synthetic substance. Substances which 
may be used in the method include proteins containing the consensus 
sequence pTyr-(hydrophobic/Glu)-(hydrophobic/Met/Tyr)-(Ile/Leu/Met) [SEQ 
ID NO:14] and proteins containing the consensus sequence Asn-Pro-X-pTyr 
[SEQ ID NO:12]. In particular, the substance may be a transmembrane or 
cytoplasmic tyrosine kinase such as EGFR, T cell receptor, TrkA, B, or C, 
or a portion or fusion protein thereof. EGFR, T cell receptor, TrkA, B, or 
C, may be activated i.e. phosphorylated, using the methods described for 
example by Reedijk et al. (The EMBO Journal, 11(4):1365, 1992) for 
producing a tyrosine phosphorylated protein. The substance may also be an 
adaptor protein such as Grb2, or a part of or fusion protein of Grb2. 
EGFR, T cell receptor, Trk receptors, Grb2, or a portion or fusion protein 
thereof may be prepared using conventional methods. Other substances which 
are capable of binding with ShcC protein or activated ShcC protein may be 
identified using the methods set forth herein. 
In accordance with a preferred embodiment, a method is provided which 
comprises providing a known concentration of a Shc protein, incubating the 
Shc protein with a transmembrane or cytoplasmic tyrosine kinase or part 
thereof, and a suspected agonist or antagonist under conditions which 
permit the formation of complexes between the Shc protein and the 
transmembrane or cytoplasmic tyrosine kinase or part thereof, assaying for 
complexes, for free Shc, for non-complexed Shc proteins, or for activation 
of ShcC proteins, and comparing to a control to determine if the substance 
is an agonist or antagonist of the interaction of the ShcC protein and 
substance. Conditions which permit the formation of protein complexes and 
methods for assaying for complexes, for free ShcC proteins, for 
non-complexed ShcC proteins, or for activation of ShcC protein are 
described herein. 
It will be understood that the agonists and antagonists that can be assayed 
using the methods of the invention may act on one or more of the binding 
sites on the protein or substance including agonist binding sites, 
competitive antagonist binding sites, non-competitive antagonist binding 
sites or allosteric sites. 
The invention also makes it possible to screen for antagonists that inhibit 
the effects of an agonist of the interaction of ShcC protein with a 
substance which is capable of binding to the ShcC protein. Thus, the 
invention may be used to assay for a substance that competes for the same 
binding site of a ShcC protein. 
The reagents suitable for applying the methods of the invention to identify 
substances that affect a ShcC regulatory system may be packaged into 
convenient kits providing the necessary materials packaged into suitable 
containers. The kits may also include suitable supports useful in 
performing the methods of the invention. 
The substances identified by the methods described herein, antibodies, and 
antisense nucleic acid molecules of the invention may be used for 
modulating a ShcC regulatory system, and accordingly may be used in the 
treatment of conditions involving perturbation of a ShcC signalling 
system. In particular, the substances may be particularly useful in the 
treatment of neurodegenerative conditions and conditions involving trauma 
and injury to the nervous system, for example Alzheimer's disease, 
Parkinson's disease, Huntington's disease, demylinating diseases, such as 
multiple sclerosis, amyotrophic lateral sclerosis, bacterial and viral 
infections of the nervous system, deficiency diseases, such as Wernicke's 
disease and nutritional polyneuropathy, progressive supranuclear palsy, 
Shy Drager's syndrome, multistem degeneration and olivo ponto cerebellar 
atrophy, peripheral nerve damage, trauma and ischemia resulting from 
stroke. The substances may also be useful in the treatment of tumors of 
the nervous system, such as neuroblastomas and they may be particularly 
effective in reversing malignant properties of the tumors. 
The substances and antibodies may be formulated into pharmaceutical 
compositions for adminstration to subjects in a biologically compatible 
form suitable for administration in vivo. By "biologically compatible form 
suitable for administration in vivo" is meant a form of the substance to 
be administered in which any toxic effects are outweighed by the 
therapeutic effects. The substances may be administered to living 
organisms including humans, and animals. Administration of a 
therapeutically active amount of the pharmaceutical compositions of the 
present invention is defined as an amount effective, at dosages and for 
periods of time necessary to achieve the desired result. For example, a 
therapeutically active amount of a substance may vary according to factors 
such as the disease state, age, sex, and weight of the individual, and the 
ability of antibody to elicit a desired response in the individual. Dosage 
regima may be adjusted to provide the optimum therapeutic response. For 
example, several divided doses may be administered daily or the dose may 
be proportionally reduced as indicated by the exigencies of the 
therapeutic situation. 
The active substance may be administered in a convenient manner such as by 
injection (subcutaneous, intravenous, etc.), oral administration, 
inhalation, transdermal application, or rectal administration. Depending 
on the route of administration, the active substance may be coated in a 
material to protect the compound from the action of enzymes, acids and 
other natural conditions which may inactivate the compound. 
The compositions described herein can be prepared by per se known methods 
for the preparation of pharmaceutically acceptable compositions which can 
be administered to subjects, such that an effective quantity of the active 
substance is combined in a mixture with a pharmaceutically acceptable 
vehicle. Suitable vehicles are described, for example, in Remington's 
Pharmaceutical Sciences (Remington's Pharmaceutical Sciences, Mack 
Publishing Company, Easton, Pa., USA 1985). On this basis, the 
compositions include, albeit not exclusively, solutions of the substances 
in association with one or more pharmaceutically acceptable vehicles or 
diluents, and contained in buffered solutions with a suitable pH and 
iso-osmotic with the physiological fluids. 
The activity of the substances, antibodies, antisense nucleic acid 
molecules, and compositions of the invention may be confirmed in animal 
experimental model systems. For example, models of peripheral nervous 
system damage include animals having damaged axons, such as axotomized 
facial neurons (Sendtner et al. Nature, 345, 440-441, 1990); models of 
neurodegenerative conditions include the MPTP model as described in 
Langston J. W. et al., Symposium of Current Concepts and Controversies in 
Parkinson's Disease, Montebello, Quebec, Canada, 1983 and Tatton W. G. et 
al., Can. J. Neurol. Sci. 1992, 19), and models of traumatic and 
non-traumatic peripheral nerve damage include animal stroke models such as 
the one described in MacMillan et al. Brain Research 151:353-368 (1978)). 
The invention also provides methods for studying the function of a ShcC 
protein. Cells, tissues, and non-human animals lacking in shcC expression 
or partially lacking in shcC expression may be developed using recombinant 
expression vectors of the invention having specific deletion or insertion 
mutations in the shcC gene. For example, the PTB domain, SH2 domain, or 
CH1 region may be deleted. A recombinant expression vector may be used to 
inactivate or alter the endogenous gene by homologous recombination, and 
thereby create a shc C deficient cell, tissue or animal. 
Null alleles may be generated in cells, such as embryonic stem cells by 
deletion mutation. A recombinant shcC gene may also be engineered to 
contain an insertion mutation which inactivates shcC Such a construct may 
then be introduced into a cell, such as an embryonic stem cell, by a 
technique such as transfection, electroporation, injection etc. Cells 
lacking an intact shcC gene may then be identified, for example by 
Southern blotting, Northern Blotting or by assaying for expression of ShcC 
using the methods described herein. Such cells may then be fused to 
embryonic stem cells to generate transgenic non-human animals deficient in 
shcC. Germline transmission of the mutation may be achieved, for example, 
by aggregating the embryonic stem cells with early stage embryos, such as 
8 cell embryos, in vitro; transferring the resulting blastocysts into 
recipient females and; generating germline transmission of the resulting 
aggregation chimeras. Such a mutant animal may be used to define specific 
cell populations, developmental patterns and in vivo processes, normally 
dependent on shcC expression. 
The following non-limiting examples are illustrative of the present 
invention: 
EXAMPLE 1 
The following materials and methods were utilized in the investigations 
outlined in Example 1: 
Materials and Methods 
Cell Culture and Reagents 
A431 and AF6295 cells (Axl-transformed NIH/3T3 cells, provided by Dr. 
Edison Liu, UNC Chapel Hill) were grown in Dulbecco's modified Eagle's 
medium (DMEM) containing 10% fetal bovine serum, penicillin and 
streptomycin in the presence of 5% CO.sub.2. PC12 cells (kindly provided 
by Dr. Patricia Maness-Tidwell, UNC Chapel Hill) were grown in DMEM 
containing 15% horse serum, 5% fetal bovine serum, penicillin and 
streptomycin in the presence of 10% CO.sub.2. Epidermal growth factor 
(EGF) was provided by Dr. H. Shelton Earp. PY20 and EGFR antibodies were 
purchased from Transduction Laboratories. HRP-linked 
anti-glutathione-S-transferase (GST) antibody was purchased from Santa 
Cruz Biotechnology. The ldash129 genomic library was provided by Dr. Janet 
Rossant, Mount Sinai Hospital. The mouse brain and NIH/3T3 cDNA libraries 
were purchased from Stratagene. 
Cloning of ShcB 
Approximately 1.4.times.10.sup.6 recombinations from a .lambda.DASH 129 
genomic library were screened in duplicate with a [.sup.32 P]-labelled 
polymerase chain reaction (PCR) fragment corresponding to the human ShcA 
SH2 domain at reduced stringency (50% formamide, 5.times.SSC, 
5.times.Denhardts, 0.5% SDS, 200 mg/ml salmon sperm DNA at 37.degree. C.). 
Filters (Hybond, Amersham) were washed twice at room temperature in 
2.times.SSC/0.1% SDS followed by a single 20 min. wash at 42.degree. C. 
Filters were exposed for 3 days. An NIH/3T3 library (Stratagene) was 
screened as above with an exon fragment from the shcB genomic clone in 
order to isolate a partial shcB cDNA. 
Cloning of ShcC 
A mouse brain library (Stratagene) (approximately 1.times.10.sup.6 
recombinants) was screened with a [.sup.32 P]-labelled PCR fragment 
corresponding to the shcB cDNA under high stringency resulting in the 
isolation of a second shcA-related cDNA ShcC. Further 5' sequence of ShcC 
was obtained by 5' RACE using 5' RACE-ready cDNA derived from mouse brain 
(Clonetech). 
Northern Blot and Reverse Transcriptase-mediated PCR (RT-PCR) Analysis of 
ShcC Expression 
Mouse multiple tissue Northern blots were purchased form Clonetech and 
probed with [.sup.32 P]-labelled PCR fragments under high stringency (50% 
formamide/10.times.Denhardts/5.times.SSC/1% SDS/100 mg/ml salmon sperm DNA 
at 42.degree. C. overnight. The filter was washed twice at 44.degree. C. 
with 2.times.SSC/0.1% SDS 30 min. each followed by a single wash at 
55.degree. C. in 0.2.times.SSC/0.1% SDS for 30-40 min. RT-PCR was 
performed as previously described (22). Briefly, 5 .mu.g total RNA from 
the indicated tissues was reverse transcribed in the presence of random 
hexamers using the Superscript MuMLV reverse transcriptase (BRL) in a 
final volume of 20 .mu.l. A portion of this cDNA reaction was PCR 
amplified in the presence of ShcC primers (5'-GTCATTGGCTCCATTCGGACA [SEQ 
ID NO:15]; 3'-ATCCTGGCATCCGGGGCTCT [SEQ ID NO:16]) and then fractionated 
on a 3% NuSeive GTG agarose gel (FMC BioProducts). 
Antibody Production, in vitro Binding and Western Blot Analysis 
The Shc SH2 domain has been previously described (1). 
Glutathione-S-transferase (GST) fusion proteins of the SH2 domains of ShcB 
and ShcC were constructed by PCR amplification of the regions encoding 
mouse ShcB and ShcC SH2 domains and subcloning into the pGEX2T bacterial 
expression vector (Pharmacia). A fusion construct of the PTB domain of 
ShcC was constructed by PCR amplification of the corresponding region of 
ShcC as shown in FIG. 1. Fragments were subcloned into pGEX4T1. The 
fidelity of the inserts was confirmed by sequencing. Bacterial cultures 
containing the fusion constructs were grown in 2.times.YT media containing 
100 .mu.g/ml ampicillin and then induced with 0.1 mM isopropyl 
b-D-thiogalactopyranoside for 3-5 hours at 37.degree. C. Bacteria were 
pelleted then lysed in phosphate buffered saline/1% Triton X-100/1% Tween 
20/1 mM dithiothriotol supplemented with 10 .mu.g/ml leupeptin and 10 
.mu.g/ml aprotinin. Antibodies were raised against fusion proteins of the 
SH2 domain ShcC as described for ShcA (1). In vitro binding experiments 
and Western blotting were performed as described in (1). 
Peptide Selection by SH2 Domains 
The selectivity of the isolated SH2 domains of ShcB and ShcC were 
determined using a degenerate peptide library screen as previously 
described (4, 23). 
Experimental Results 
Identification of Two Mouse Genes Related to shcA 
During the course of screening a mouse genomic library with a human shcA 
probe, a genomic clone was isolated which was derived from a novel 
shc-like gene (shcB). Sequence analysis of the genomic shcB clone 
identified an exon encoding part of an SH2 domain similar to that found in 
human ShcA. However, several lines of evidence suggested that the protein 
product of this genomic clone was distinct from ShcA. In particular, the 
predicted sequence of the mouse ShcB SH2 domain showed only 67% identity 
to the mouse ShcA SH2 domain. Sequence comparison of shcB suggests that it 
is the mouse gene corresponding to the human shc-like gene, sck. 
While pursuing the isolation of shcB cDNAs, a mouse brain cDNA library was 
screened with a shcB probe. Analysis of one cDNA clone isolated in this 
screen gave a predicted protein sequence distinct from both mouse ShcA and 
ShcB suggesting the presence of a third member of the shc gene family 
(ShcC). The ShcC clone contained an open reading frame encoding 474 amino 
acids with a potential initiating methionine. This sequence apparently 
encodes the p55 isoform of ShcC described below. 
Comparison of the predicted protein sequences of mouse ShcA and ShcC (FIG. 
1) indicates that these proteins are highly related (59% identity). ShcC 
has a 96 amino acid C-terminal sequence that shares 69% identity with the 
ShcA SH2 domain and possesses all the residues characteristic of an SH2 
domain, including amino acids required for phosphotyrosine binding (24, 
25). At its N-terminus, ShcC has a region of 163 amino acids that is 
closely related to the ShcA PTB domain (78% identity). The most highly 
conserved sequences between ShcA and ShcC are those corresponding to the 
ShcA SH2 and PTB domains, suggesting that ShcC might also have two 
distinct phosphotyrosine-recognition modules that bind activated tyrosine 
kinases. The central CH1 regions of ShcA and ShcC are less similar (40% 
identity) but contain at least three well-conserved motifs. A motif 
corresponding to the ShcA tyrosine phosphorylation site and Grb2-binding 
site (Tyr313-Val-Asn-Ile in mouse ShcA, aa 313-316 of SEQ ID NO:6) is 
present in ShcC and human Sck (Tyr-Val-Asn-Thr, aa 317-320 of SEQ ID 
NO:7). In addition, a motif with the consensus 
Tyr-Tyr-Asn-X-X-Pro-X-Lys-X-Pro-Pro [SEQ ID NO:17] (where X represents a 
variable amino acid) is present in the CH1 regions of ShcA, Sck, ShcC and 
Drosophila Shc. The mammalian Shc proteins have an additional conserved 
motif 
(Lys/Arg-Asp-Leu-Phe-Asp-Met-Arg/Lys-Pro-Phe-Glu-Asp-Ala-Leu-Lys/Arg, SEQ 
ID NO:18) in the CH1 region. Based on the precedent set by the binding of 
Grb2 to the Tyr317 phosphorylation site of human Shc, it is probable that 
the conserved motifs in the CH1 regions of the Shc family of proteins 
contact downstream targets. In addition, the variable sequences present in 
the CH1 regions may impart specificity in downstream signalling. 
ShcC is Preferentially Expressed in the Brain 
Previous studies have determined that shcA is widely expressed. Therefore, 
the expression profile of ShcC was investigated. Northern blot analysis of 
poly-A+RNA from various mouse tissues indicated that ShcC is specifically 
expressed in the brain as two transcripts of approximately 10 and 9.8 kb 
(FIG. 2A). Similarly, reverse transcriptase-mediated PCR (RT-PCR) 
indicated that ShcC is only detectably expressed in the brain (FIG. 2B). 
These results suggest that the expression of ShcC is highly restricted. To 
investigate this point in more detail, antibodies were raised against a 
GST fusion protein containing the ShcC SH2 domain. Affinity-purified 
anti-ShcC antibodies specifically detected two major protein species of 55 
kDa and 69 kDa in lysates from mouse cerebellum, cerebrum, for brain, eye 
and spinal cord which were absent from heart, intestine, kidney, liver, 
lung, pancreas, spleen and stomach (FIG. 3A). These bands were 
specifically competed away by incubating the antibody with fusion protein, 
but not with GST alone, and were not detected with pre-immune serum. In 
addition, a larger immunoreactive polypeptide of 100 kDa was detected in a 
number of cell lines of neural origin (data not shown). The 55 kDa protein 
recognized by the anti-ShcC antibody is apparently encoded by the open 
reading frame within the cloned ShcC cDNA. Since no 5' in-frame stop 
codons have yet been identified, it is likely that additional 5' sequences 
exist which may encode the 69 and 100 kDa immunoreactive proteins. Indeed, 
shcA encodes multiple protein isoforms (p46, p52, and p66) that differ 
solely in the extent of their N-terminal sequences and are all detected 
using antibodies directed against the ShcA SH82 domain (FIG. 3B). The ShcC 
antibodies did not recognize specific proteins in several tissues which 
are known to express ShcA indicating that these antibodies are specific 
and do not cross-react with ShcA polypeptides (FIG. 3). These results 
indicate that ShcC proteins are primarily expressed in the nervous system 
consistent with the expression pattern of ShcC RNA. In contrast, ShcA 
proteins are widely expressed but are only present at low levels in the 
central nervous system (FIG. 3A and FIG. 3B). 
The ShcB and ShcC SH2 Domains Bind Specific Phosphopeptides and 
Phosphotyrosine-containing Proteins 
To test whether the ShcC SH2 domain binds specific 
phosphotyrosine-containing peptides, GST-SH2 fusion proteins were used to 
examine binding selectivity using a degenerate phosphopeptide library 
screen (4,26). The specificity of the ShcC SH2 domain was compared with 
that of ShcA and ShcB. As previously described, the human ShcA SH2 domain 
selected peptides with the consensus sequence 
pTyr-(hydrophobic/Glu)-X-(Ile/Leu/Met), with X indicating little or no 
selectivity at the +2 position. The ShcB and ShcC SH2 domains gave 
similar, but distinct, profiles compared to ShcA (Table 1). In contrast to 
ShcA, ShcB and ShcC showed a preference for hydrophobic amino acids at the 
+2 position. ShcB selected Met and Ile at +2, whereas ShcC selected Met 
and Tyr. As with ShcA, both ShcB and ShcC SH2 domains selected hydrophobic 
amino acids at the +1 and +3 position. However, the ShcB SH2 domain bound 
preferentially to Phe and Tyr at +3 which was not seen with the other Shc 
family members. These data suggest that the ShcA, ShcB and ShcC SH2 
domains are similar in their binding specificity for 
phosphotyrosine-containing peptides, as anticipated from their close 
sequence relationship. However, there are discernable differences in their 
selectivity for residues at the +1 to +3 positions, suggesting that their 
binding to cellular phosphoproteins is not identical. 
The ability of the SH2 domains of the Shc family members to bind 
phosphotyrosine-containing proteins in cell lysates was therefore 
investigated directly. The ShcA, ShcB and ShcC SH2 domains all bound 
specifically to the autophosphorylated EGF-receptor in EGF-stimulated 
cells. However the ShcB SH2 domain appeared to bind more efficiently than 
ShcC, which in turn was more efficient than ShcA (FIG. 4). In contrast, in 
lysates from NIH/3T3 cells which overexpress the Axl RTK (22), the ShcA 
SH2 domain bound most tightly to autophosphorylated Axl, followed by the 
ShcB SH2, which was more effective than ShcC SH2 (FIG. 4). These results 
are consistent with the data from the phosphopeptide library selection, 
indicating that the SH2 domains of the different Shc family members have 
similar binding specificities, but also display differences which may 
affect their relative abilities to recognize specific 
phosphotyrosine-containing proteins in vivo. 
ShcC Has a Functional PTB Domain 
ShcC has sequences related to the ShcA PTB domain. To test whether this 
region might function as a phosphotyrosine-binding module, the presumptive 
PTB domain of ShcC was expressed as a GST fusion protein, and assessed for 
its ability to bind to phosphotyrosine-containing proteins in lysates of 
EGF-stimulated cells. As shown in FIG. 4C, the ShcC PTB domain bound to 
the autophosphorylated EGF-receptor, and a number of other tyrosine 
phosphorylated proteins in lysates of EGF-stimulated cells. Comparison of 
phosphoproteins bound by the ShcC PTB and SH2 domains, showed that they 
recognized overlapping but distinct sets of proteins. These results 
suggest that the ShcC PTB domain is active in binding to specific 
phosphotyrosine-containing proteins. 
Since ShcC is expressed primarily in neural derived tissues, ShcC coupling 
to neural specific receptor tyrosine kinases was tested. ShcA had been 
shown to specifically interact with the TrkA receptor (21, 29) which is 
expressed in neural crest-derived sensory neurons (30). This interaction 
occurs through the PTB domain of ShcA which binds to the motif 
Ile-Glu-Asn-Pro-Gln-pTyr in the juxtamembrane regions of activated TrkA. 
The ShcC PTB domain also bound in vitro to autophosphorylated TrkA, 
present in lysates of NIH3T3 cells that ectopically express TrkA (FIG. 
5B). This interaction was blocked by inclusion of a phosphopeptide modeled 
on the Tyr-490 justamembrane autophosphorylation site of TrkA. These 
results demonstrate that ShcC can specifically interact with neural 
receptors and that the ShcC PTB domain recognized phosphorylated sequences 
with an Asn-Pro-X-pTyr motif. 
Discussion of Experimental Results 
A Shc Gene Family 
Previous work has suggested that ShcA adaptor proteins play a central role 
in transducing signals from transmembrane and cytoplasmic tyrosine kinases 
(1, 16). Several biochemical attributes of ShcA apparently contribute to 
its ability to couple to multiple tyrosine kinases. Notably, mammalian 
ShcA and its Drosophila homolog are the only proteins identified thus far 
that contain both functional SH2 and PTB domains. The potential 
significance of the shcA gene is underscored by its conservation between 
invertebrates and mammals. Here, two additional shc-related genes have 
been identified some of the properties of their protein products have been 
analyzed. The observation that the mammalian genome encodes a family of 
Shc-related proteins raises the possibility that Shc polypeptides are more 
diverse in function than previously anticipated. Since there are multiple 
mammalian shc genes, the novel genes have been designated as shcB and shcC 
and the original shc gene as shcA. 
Modular Construction of Shc Family Members 
ShcA proteins have two distinct phosphotyrosine-recognition modules, the 
SH2 and PTB domains, that flank a central region that contains the 
principal ShcA tyrosine phosphorylation site. Based on the observation 
that Grb2 binds the Tyr317 phosphorylation site of human ShcA, it is 
probable that the central CH1 region of ShcA provides binding sites for 
downstream targets. This possibility suggests a model in which the PTB and 
SH2 domains couple ShcA to upstream tyrosine kinases, while the CH1 domain 
is an effector region that provides an output to cytoplasmic signalling 
proteins. 
ShcA and ShcC share a common structural organization. ShcC has an 
amino-terminal PTB domain that is 78% identical to the ShcA PTB domain. 
Although the mechanisms by which the ShcA PTB domain recognizes 
Leu/Ile-X-Asn-Pro-X-pTyr [SEQ ID NO:10] sites is not known, an Arg residue 
has been identified in the ShcA PTB (Arg175 of p52shc) that is critical 
for binding of phosphorylated ligands and might play a role in 
phosphotyrosine-recognition. This Arg is conserved in ShcC (FIG. 1). These 
observations suggest that the PTB domains of ShcB and ShcC will bind 
specific phosphotyrosine sites as observed for ShcA PTB. Indeed, the ShcC 
PTB domain associated in vitro with the autophosphorylated EGF-receptor 
and with a number of additional phosphotyrosine-containing proteins in 
EGF-stimulated cells (FIG. 4C). 
Both ShcB and ShcC have a C-terminal SH2 domain which shows similar in 
vitro binding specificity as compared to the ShcA SH2 domain. However, 
there are differences in the binding properties of the SH2 domains of the 
three Shc family members which suggest they may have distinct, albeit 
related, in vivo binding activities. Taken together, these results 
indicate that ShcC has functional SH2 and PTB domains and might thereby 
interact with a wide range of tyrosine kinases and 
phosphotyrosine-containing proteins. 
The central effector region of the Shc family members is less well 
conserved, sharing only 32-40% identity. However, several short motifs are 
conserved in the CH1 domains of all three proteins which might provide 
contact sites for distinct effectors. Both ShcC and Sck have potential 
Grb2-binding sites (Tyr-Val-Asn-Thr, SEQ ID NO:13)) which are similar to 
the known Grb2 binding site of human ShcA (Tyr-Val-Asn-Val, aa 317-320 of 
SEQ ID NO:7) (FIG. 1). It is possible that this sequence in ShcC binds an 
SH2 domain other than, or in addition to Grb2. Another motif in the CH1 
region, Tyr-Tyr-Asn-X-X-Pro-X-Lys-X-Pro-Pro [SEQ ID NO:17] is conserved in 
the three mammalian Shc family members and is also present in Drosophila 
Shc which lacks a Grb2-binding site. It is not known whether the Tyr 
residues in this motif are phosphorylated. However, this element is a 
strong candidate for an effector binding site. The more variable residues 
in the CH1 domains of Shc family members may play a structural role or may 
allow these presumptive adaptors to contact novel effectors. 
Signalling Functions of ShcC 
A striking difference between ShcC and ShcA is in their pattern of 
expression. ShcC RNA and protein is specifically expressed in the mouse 
brain. Although shcB RNA is also predominantly found in the brain, it is 
more widely expressed than shcC. However, both ShcB and ShcC are 
distinguished from ShcA, which is very broadly expressed. These data raise 
the possibility that the new Shc family members, especially ShcC, may play 
a specific role in signalling from tyrosine kinases in the nervous system. 
Both the TrkB and TrkC receptor tyrosine kinases, that are activated by 
brain-derived neurotrophic factor and neurotrophin-3 or -4/5, possess a 
juxtamembrane motif corresponding to the Tyr 490 PTB-binding site in TrkA, 
which is recognized by the ShcC PTB domain. Hence, ShcC may participate in 
signalling from these neurotrophin receptors, as well as other tyrosine 
kinases such as Pyk2 which are primarily expressed in the brain (32). 
EXAMPLE 2 
I. Expression of the Isolated ShcC SH2 Domain But Not the PTB Domain Blocks 
MAPK Activation by EGF 
In order to assess the effect of expression of the isolated SH2 and PTB 
domains of ShcC, the ability of these isolated domains to block MAPK 
activation by the EGFR in transient transcription assays was tested. The 
transcription assays used were as previously described (33). MAPK 
activation was measured by activation of the Elk-1 transcription factor 
which is a substrate of MAPK. Activation of Elk-1 was determined by 
cotransfection of 293T cells with Gal4-Elk-1, a construct encoding a 
fusion protein consisting of the Gal4-DNA binding domain and the Elk-1 
transcriptional activation domain (which contains the MAPK phosphorylation 
sites), and Gal4-Luc, which contains the luciferase gene driven by a 
minimal promoter containing five tandem Gal4 DNA-binding sites (35). 
Together, these constructs were cotransfected along with the ShcC mutants 
into 293T cells using calcium phosphate precipitation. Twenty-four hours 
after transfection, the cells were starved in medium containing 0.1% serum 
for 16 hrs. On the following day cells were stimulated with EGF (100 
ng/ml) for 4-5 hrs or left unstimulated and then lysed. Cell lysates were 
then measured for luciferase activity in a luminometer (33). Expression of 
the ShcC SH2 domain blocked the EGF-induced MAPK activity by approximately 
50%; however, the PTB domain did not appear to significantly affect the 
EGF-induced MAPK activity (FIG. 8A). In order to assess specificity of 
these constructs at blocking signaling, the effect of expression of other 
SH2 domains on MAPK activation by EGF was tested. The Grb2 SH2 completely 
inhibited EGF-induced MAPK activity. In fact the base line MAPK activity 
in the absence of EGF was significantly reduced as compared to vector 
transfected cells. As expected, expression of the SH2-SH3-SH2 region of 
RasGAP did not inhibit MAPK activation. In addition, the ShcC SH2 and PTB 
domains did not inhibit the activation of MAPK by H-Ras61L, a 
constitutively activated form of Ras which is independent of exchange 
factors and therefore refractory to the effects of Shc dominant-negative 
proteins (FIG. 8B). These results suggest that the isolated domains of 
ShcC act as dominant negative proteins and specifically inhibit EGFR 
signaling. 
To further examine the inhibition by these dominant negative proteins, 
their effect on the actual in vitro kinase activity of MAPK with and 
without EGF stimulation was tested (FIG. 9). In these experiments, the 
ShcC dominant negatives were cotransfected with a plasmid encoding an HA 
epitope-tagged MAPK. Again, 24 hrs after transfection the cells were serum 
starved and then stimulated the following morning with EGF (100 ng/ml) for 
10 min. or left unstimulated. The lysates were clarified and the MAPK 
immunoprecipitated with anti-HA monoclonal antibodies. The 
immunoprecipitates were subjected to an in vitro kinase assay with the 
MAPK substrate myelin basic protein (MBP). Samples were then fractionated 
on SDS-PAGE, and transferred to Immobilon filters. The filters were then 
dried and MBP phosphorylation quantitated using a phosphorimager. As shown 
in FIG. 9, the SH2 domains of ShcC and Grb2 were effective inhibitors of 
MAPK activation by EGF. Furthermore, in contrast to the Gal-Elk assay, the 
PTB domain appeared to have a slight inhibitory effect on MAPK activation. 
In addition, the negative control of GAP 2-3-2 did not inhibit activity. 
II. Expression of the ShcC SH2 and PTB Domains in EGFR-transformed NIH/3T3 
Cells Blocks Transformation 
Overexpression of the EGFR in NIH/3T3 cells results in ligand dependent 
transformation (30, 46). However, a number of receptor tyrosine kinases 
are transforming in the absence of ligand due to their high overexpression 
which likely leads to constitutive dimerization and kinase activation (26, 
36, 39). This finding is due to the fact that cells are initially selected 
for uptake of the construct expressing the RTK and then the selected cells 
are passaged, allowed to grow to confluence then assessed for the presence 
of morphologically transformed cells. This approach allows for the 
selection of cells overexpressing the RTK and is referred to as a 
secondary focus-formation assay. The advantage of a secondary 
focus-formation assay is that one can identify weakly transforming genes 
by virtue of the enrichment of cells expressing the gene. When tested in a 
secondary focus-formation assay, a number of RTKs including the EGFR, TrkA 
(NGFR), Axl and Rek were found to transform cells in the absence of their 
respective ligand (26, 39). 
An EGFR-transformed cell line was established from a secondary 
focus-formation assay. Once EGFR-transformed foci formed, the cells were 
continually passaged to allow for overgrowth of the EGFR-transformed 
cells. These cells express high levels of activated EGFR as assessed by 
Western blot analysis with both anti-phosphotyrosine and anti-EGFR 
antibodies. Using these EGFR-transformed cells, the effect of 
overexpression of the ShcC PTB or SH2 domains on the transformed 
properties of these cells was tested. EGFR cells transfected with vector 
alone grew well in soft agar (FIG. 10). Expression of the ShcC PTB domain 
partially blocked the soft agar growth of these cells. However, expression 
of the SH2 domain dramatically reduced the number of soft agar colonies 
obtained. These results suggest that the SH2 domain is an effective 
inhibitor of the long term function of the EGFR, i.e. it blocked EGFR 
transformation. The PTB domain also inhibited transformation but did not 
appear to be as effective. These results suggest that the isolated domains 
of ShcC are able to inhibit EGFR transformation supporting the use of 
these domains as potential therapeutic agents. 
III. Cells Which Express the SH2 Domain of ShcC Are Resistant to 
Transformation By the EGFR 
To further assess the ability of the isolated SH2 and PTB domains to block 
EGFR function, NIH/3T3 cell lines were established which overexpress 
either the SH2 or PTB domains of ShcC. These cells were then tested for 
their ability to be transformed by the wild type EGFR in a secondary 
focus-formation assay as described above. While vector transfected cells 
were transformed quite well by the EGFR, the SH2 expressing cells were 
transformed less efficiently. In addition, expression of the PTB domain 
partially inhibited EGFR transforming activity. These results suggest that 
the SH2 domain of ShcC can block interaction of Shc proteins with the EGFR 
thereby interfering with receptor signaling. Coupled with the results 
discussed in II above, the SH2 domain and PTB domain of ShcC appear to 
inhibit transformation, i.e., focus-formation, as well as revert the 
transformed phenotype, i.e., soft agar growth. However, the SH2 domain 
appeared more potent at inhibition of EGFR function suggesting that the 
interaction of the SH2 domain with the EGFR plays a more crucial role in 
linking the receptor with Shc than does the PTB domain. IV. Full Length 
ShcC Stimulates Gal-Elk Activation 
To assess the activity of full length ShcC, 293T cells were cotransfected 
with either pCGN-ShcC or empty vector along with the Gal-Elk reporter 
constructs to measure MAPK activation in response to EGF treatment. As 
shown in FIG. 11, expression of full length ShcC stimulates MAPK activity 
to the level seen with EGF stimulation of vector control cells. 
Furthermore, EGF treatment leads to an even greater level of MAPK 
activation, approximated 3 fold higher than is seen in EGF treated vector 
control cells. These results suggest that overexpression of ShcC can 
activate the MAPK pathway as has been reported for ShcA overexpression 
(32). 
These results demonstrate that the SH2 domain of ShcC can both inhibit as 
well as revert some of the transformed properties resulting from 
overexpression of the EGFR. In addition, expression of the PTB domain has 
some inhibitory effects on EGFR transformation but the level of inhibition 
is not as substantial as with the SH2 domain. These findings suggest that 
the isolated domains of ShcC may function as effective therapeutic agents 
for inhibiting or possibly reverting the transformed phenotype of certain 
tumors. For example, glioblastomas have a high frequency of EGFR 
amplification and rearrangement suggesting an involvement of the EGFR in 
the progression of this tumor. Expression of the ShcC SH2 and/or PTB 
domains in these tumor cells may lead to effective reversion of some of 
the malignant properties of this tumor. 
EXAMPLE 3 
I. Mutations in the PTB Domain of ShcC Affect the Binding to Tyrosine 
Phosphorylated Proteins 
A panel of mutations in the ShcC PTB domain have been characterized for 
their effect on phosphotyrosine binding. The results of the analysis are 
shown in Table 1. 
II. Purified GST-PTB Domain of ShcC Specifically Binds Phospholipids in 
vitro 
Bacterially expressed ShcC GST-PTB was tested in in vitro binding assays 
for binding phospholipids as previously described for SH2 domains (41). 
Briefly, a 200 mM mixture of crude brain phosphoinositides (Sigma) was 
incubated with purified PI3K in the presence of 15 mM Hepes, pH 7.0, 200 
mM [.sup.32 P]ATP (1.1 mCi/mmol) and 5 mM MgCl.sub.2 for 30 min at room 
temperature. The reaction was stopped with the addition of 10 mM EDTA and 
the lipids were extracted with chloroform:methanol:HCl and dried (42). The 
dried lipids were then resuspended in 10 mM Hepes, pH 7.0, 1 mM EDTA, 
sonicated then added to 20 .mu.g of either GST or GST-PTB fusion proteins 
immobilized on glutathione-agarose beads (Sigma). The beads were incubated 
for 1 hr at room temperature then washed twice with 1 ml 30 mM Hepes, pH 
7.0, 100 mM NaCl, 1 mM EDTA (HNE). Associated lipids were removed by 
extraction with chloroform: methanol: HCl (1:1:0.1) and resolved on thin 
layer chromatography using 1-propanol:2 M acetic acid (65:35 vol/vol). 
Radioactivity was then quantitated on a phosphorimager. The results shown 
in FIG. 12 represent relative amounts of PIP3 binding by wild type versus 
mutant PTB domains. The wild type PTB domain specifically bound PIP3. 
Using mutants of the ShcC PTB domain which have been characterized for 
their ability to bind phosphotyrosine, phosphotyrosine binding appeared to 
be separated from phospholipid binding. The A136T mutation greatly reduced 
binding to tyrosine phosphorylated proteins (as measured by binding to the 
activated EGFR, 47) without impairing binding to PIP3. Although less 
striking, the T118S mutation reduced PIP3 binding more than pTyr binding. 
These results suggest the existence of separate binding sites for 
phosphotyrosine and phospholipid. It was previously shown that the SH2 
domain of PI3K also interacts with phospholipids suggesting a regulatory 
mechanism for PI3K activity (41). A similar mechanism can be envisioned 
for PTB binding to phosphoproteins. The binding to the activated EGFR as 
shown in FIG. 12 represents the average of three independent experiments 
with the standard errors marked by bars. 
III. HA-tagged PTB Domain of ShcC Fractionates With the Membrane Component 
of Cells 
The ability of the PTB domain to bind phosphotyrosine and phospholipid, 
suggested that PTB domains may direct proteins to the membrane component 
of cells. To test this hypothesis, the subcellular location of the 
isolated PTB domain was examained. The ShcC PTB domain was expressed in 
EGFR-transformed NIH/3T3 cells and the resulting cells were expanded, 
stimulated with or without EGF (100 ng/ml) for 5 min and then lysed. The 
insoluble debris was pelleted and the remaining sample fractionated into 
soluble and membrane fractions as previously described (38). After 
normalization for proteins content, equivalent amounts (eight micrograms) 
were separated on SDS-PAGE, transferred to Immobilon-P filters then 
Western blotted with an HA-specific monoclonal antibody. As shown in FIG. 
13 the HA-PTB domain fractionated with the membrane component of cells 
suggesting that the PTB domain can direct membrane localization. 
Interestingly, treatment with EGF did not seem to affect the subcellular 
localization suggesting that the PTB is constitutively at the membrane. 
Since Shc proteins are normally cytosolic in unstimulated cells (31), this 
result suggests that expression of the isolated PTB domain unmasks a 
latent activity of the PTB domain which is normally blocked in the context 
of the full length protein. 
IV. Heterologously Expressed ShcC PTB Domain Is Tyrosine Phosphorylated In 
Response to EGF and Constitutively Activated SrcY527F 
In the process of examining lysates of cells expressing either the PTB or 
SH2 domain of ShcC, EGF treatment of PTB expressing cells was found to 
result in a shift in the mobility of the PTB domain. A similar shift was 
detected in 293T cells transiently cotransfected with the PTB expression 
construct and a SrcY527F expression construct (FIG. 14). Western blot 
analysis with antiphosphotyrosine antibodies indicated that the slower 
migrating form of the PTB domain was tyrosine phosphorylated. These 
results are intriguing since phosphorylation of the PTB domain has not 
been previously described. To determine whether this phosphorylation was a 
direct effect of the EGFR, the ability of immunopurified EGFR to 
phosphorylate purified GST-PTB domain was tested. The EGFR receptor was 
immunoprecipitated from lysates of A431 cells stimulated with EGF for 2 
min. at room temperature. A431 cells highly overexpress the endogenous 
EGFR and are therefore a good source of the receptor (37, 44). In vitro 
kinase assays were performed as previously described (34). Briefly, EGFR 
immunoprecipitates were washed extensively in 50 mM HEPES, pH 7.5/150 mM 
NaCl/10% glycerol/1% Triton X-100/1 mM EGTA/1.5 mM MgCl.sub.2 /100 mM 
sodium fluoride/10 mM sodium pyrophosphate/1 mM sodium vanadate/10 
.mu.g/ml aprotinin/10 .mu.g/ml leupeptin and then in 20 HEPES, pH 7.5/150 
mM NaCl/0.1 % Triton X-100/10% glycerol/1 mM sodium vanadate. The 
immunoprecipitate was split into two equivalent fractions and to one 
fraction was added purified GST-PTB and to the other purified GST as a 
negative control. The washed samples were incubated in kinase buffer (20 
mM HEPES, pH 7.5/25 mM MgCl.sub.2 /4 mM MnCl.sub.2 /0.1 mM vanadate) in 
the presence of .gamma.[.sup.32 ]P-ATP for 30 min. at room temperature 
then fractionated on a 12% SDS-PAGE. The gel was fixed, dried and exposed 
to X-Ray film to visualize bands. As shown in FIG. 15, the EGFR was 
phosphorylated quite well; however, there was no detectable 
phosphorylation of the GST-PTB protein (position is marked with an arrow) 
suggesting that the EGFR does not directly phosphorylate the PTB domain. 
In summary, the ShcC PTB domain was found to bind phospholipids in addition 
to tyrosine phosphorylated proteins. These two activities may involve 
separate regions of the PTB domain. In addition, the phosphorylation and 
membrane localization of the ShcC PTB domain was described. 
EXAMPLE 4 
ShcC Is Expressed In NB Cell Lines, the Embryonic and Adult Brain As Well 
As Other Embryonic Tissues 
ShcC is expressed only in tissues derived from the adult brain, whereas 
ShcA is more widely expressed (FIGS. 16A and 16B). Furthermore, Western 
blot analysis of lysates from cell lines of various origins indicates that 
endogenous ShcC expression is only detected in NB cell lines (FIG. 16C). 
Although full length ShcA has been reported to differentiate PC12 cells in 
the absence of added NGF, ShcC overexpression was not found to affect the 
morphology of PC12 cells. Since ShcA and ShcC have not been compared side 
by side, it is possible that the apparent difference in biologic activity 
may be due to levels of expression of the transfected gene. 
Using tissue from frozen sections of day 18 embryonic mice as well as adult 
mice, the temporal and spatial patterns of ShcC expression was examined. 
Affinity purified antibodies to ShcC are specific to ShcC and do not cross 
react with ShcA on Western blot analyses (FIG. 16). Using these antibodies 
in immunohistochemical staining, specific expression of ShcC was detected 
in both the adult and embryonic (E18) brain (FIG. 17). Immunoreactivity 
was competed away by the inclusion of soluble antigen (GST-SH2 protein). 
ShcC expression was also detected in a number of additional embryonic 
tissues including a subset of muscles in the neck, the fetal liver and the 
muscles surrounding the intestines. Since ShcC expression was not detected 
in the adult counterparts of these tissues, these results suggest that 
ShcC may have a specific function in tissues other than the brain but at 
very restricted points during development. Abundant ShcC expression in the 
cerebellum and spinal cord was observed (FIG. 17). 
II. ShcC Is Expressed In Primary Mouse Neuronal Cultures After 
Differentiation For 10 Days 
To determine which cells in the brain express ShcC, ShcC expression in in 
vitro cultures of primary neurons has been examined. An advantage of this 
approach is that highly enriched cultures of neurons can be isolated and 
used to define the cell-type expression of ShcC. However, since other cell 
types are also present in these cultures, the exact types of cells 
expressing ShcC can be determined through imunohistochemical staining of 
the cultures. Preliminary results indicated that ShcC expression was 
specifically induced in neuron-like cells after 9 days in culture on a rat 
astrocyte feeder layer suggesting that ShcC expression is important in the 
in vitro differentiation of neurons (FIG. 18). The staining was specific 
to the neuron-like cells as the astrocyte feeder layer was negative for 
ShcC staining (FIG. 18A) as were microglial cultures (data not shown). 
The primary cultures were isolated by the following protocol. Briefly, 
Swiss Webster mouse embryos (day 16 of gestation) or Sprague-Dawley rat 
embryos (day 18 of gestation) were used to generate cortical and 
hippocampal neuronal cultures as previously described (29). Mouse/rat 
embryos were cooled in sterile Ca.sup.2+ /Mg.sup.2+ -free (CMF) Hanks' 
balanced salt solution supplemented with 20 mM HEPES, 4.2 mM sodium 
bicarbonate, 1 mM pyruvate at pH 7.25, and 3 mg/ml bovine serum albumin 
(28). The dissected cortical tissue was rinsed with CMF and resuspended in 
5.0 ml of 0.125% trypsin (Sigma, St. Louis, Mo.) and 0.5 mM EDTA in CMF at 
37.degree. C. The suspension was mixed by gentle pipeting and incubated in 
a shaking water bath for 10 min at 37.degree. C. The trypsin was quenched 
with 8.0 ml of 10% fetal bovine serum in DMEM, followed by a repeat of the 
pipeting step. The suspension was then centrifuged at 270.times.g for 5.0 
min, the supernatant aspirated off, and the tissue resuspended in 4.0 ml 
of DMEM supplemented with N2 (27). The cortical tissue was then 
mechanically dissociated as previously described (28) and filtered through 
a 40 .mu.m sterile Falcon Cell Strainer (Becton Dickinson, Franklin Lakes, 
N.J.). Neurons were plated on polylysine for short-term cultures (0-7 
dayes) or on confluent layers of purified rat astrocytes (40) for 
long-term cultures (7-30 days). The cultures were maintained at 37.degree. 
C. with 5% CO.sub.2 and half of the media was replaced every 3 days with 
fresh DMEM-N2. The ShcC immunostaining was performed, with minor 
modifications, as previously described (29). The cultures were fixed with 
fresh 4% paraformaldehyde in PBS (pH 7.2) for 20 mm, rinsed twice for 5 
min with PBS, and then permeabilized with 0.2% Triton X-100 in 0.1 M Tris 
and 0.85% NaCl, pH 7.5 (Tris-A) for 20 min, followed by two additional 
washes with 0.1 M Tris, and 0.85% NaCl, pH 7.5 (Tris-buffer). The fixed 
cells were then incubated with 0.1 M Tris, 0.85% NaCl, and 2% BSA (Sigma, 
St. Louis, Mo.), pH 7.5, (Tris-B) to reduce non-specific binding in 
subsequent steps of the immunostaining protocol. The anti-ShcC primary 
antibody (0.14 .mu.g/ml) diluted 1:100 with Tris-B, was added to the wells 
and incubated for one hr at 37.degree. C. with gentle agitation. The 
primary antibody was aspirated off and the wells rinsed three times with 
Tris-buffer. The secondary antibody, biotinylated anti-rabbit IgG (ABC 
Elite immunoperoxidase kit, Vector Labs, Burlingame, Calif.) in Tris-B, 
was added and incubated for one hr at 37.degree. C. with gentle agitation, 
followed by three rinses with Tris-buffer. The avidin-biotin-peroxidase 
complex (ABC Elite immunoperoxidase kit, Vector Labs, Burlingame, Calif.) 
in Tris-B was added to the wells and incubated for one hr at 37.degree. 
C., followed by three rinses with Tris-buffer. The ShcC immunostaining was 
detected with a Vector SG peroxidase substrate kit (SG kit, Vector Labs, 
Burlingame, Calif.). Immunocytochemical controls without primary antibody 
or with control rabbit IgG were uniformly negative. The mouse/rat 
astrocyte and microglia cultures failed to produce any detectable 
immunostaining even at twice the concentration of anti-ShcC antibody used 
for immunostaining of the neuronal cultures. 
The restricted expression of ShcC in tissues of the brain indicates a role 
for ShcC in neural specific signaling and development. This is also 
supported by results from immunohistochemical staining of embryonic mouse 
brains; the finding that ShcC is expressed in NB cell lines but not other 
brain derived tumor lines; and the observation that ShcC expression is 
induced in in vitro neuron cultures during neuronal differentiation. 
Having illustrated and described the principles of the invention in a 
preferred embodiment, it should be appreciated to those skilled in the art 
that the invention can be modified in arrangement and detail without 
departure from such principles. In particular, it will be appreciated that 
the description above relating to embodiments of the invention for ShcC 
proteins and nucleic acids encoding same are applicable to and can be 
carried out with the Shc B protein of the invention, and nucleic acids 
encoding same. All modifications coming within the scope of the following 
claims are claimed. 
All publications, patents and patent applications referred to herein are 
incorporated by reference in their entirety to the same extent as if each 
individual publication, patent or patent application was specifically and 
individually indicated to be incorporated by reference in its entirety. 
Below full citations are set out for the references referred to in the 
specification and detailed legends for the figures are provided. 
The application contains sequence listings which form part of the 
application. 
TABLE 1 
______________________________________ 
Summary of mutations in the ShcC PTB domain 
Mutation Location of Mutation.sup.1 
Relative Binding 
______________________________________ 
Wild Type -- 1.0 
T118S Loop 5 (.beta.2'-.beta.3) 
0.81 .+-. 0.13 
E63G .alpha.2 0.087 .+-. 0.037 
M130I Loop 7 (.beta.4-.beta.5) 
1.0 .+-. 0.31 
S132V Loop 7 (.beta.4-.beta.5) 
G32R Loop 1 (.alpha.1-.beta.1) 
0.14 .+-. 0.044 
A136T .beta.5 
C166R Loop 10 (.beta.7-.alpha.3) 
G32R Loop 1 (.alpha.1-.beta.1) 
0.93 .+-. .28 
A136T .beta.5 0.12 .+-. 0.021 
C166R Loop 10 (.beta.7-.alpha.3) 
A136T .beta.5 0.16 .+-. 0.061 
T58A .alpha.2 1.2 .+-. 0.20 
G30R .alpha.1 1.0 .+-. 0.12 
H128Q Loop 7 (.beta.4-.beta.5) 
G139E Loop 8 (.beta.5-.beta.6) 
0.073 .+-. 0.0067 
D140N Loop 8 (.beta.5-.beta.6) 
T111I .beta.3 1.2 .+-. 0.35 
S86C Loop 3 (.alpha.2-.beta.2) 
1.2 .+-. 0.10 
V36M .beta.1 1.0 .+-. 0.23 
______________________________________ 
.sup.1 The nomenclature used corresponds to that used in Zhou, et. al. 
(1995) Nature 378, 584. 
.sup.2 The relative binding affinities for these mutants were determined 
in independent binding experiments with the wildtype, G32R, A136T, 
A136T/C166R and G32R/A136T/C166R mutant PTB domains only. 
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DETAILED FIGURE LEGENDS FOR FIGS. 1 TO 5, 8 TO 18 
FIG. 1 
Alignment of the Shc family of proteins. ShcA [SEQ ID NO:7] and ShcC [SEQ 
ID NO:2] represent the predicted peptide sequences of the respective mouse 
genes. dShc represents the predicted sequence of the Drosophila Shc gene. 
[SEQ ID NO:9] (21). The predicted peptide sequence [SEQ ID NO:6] of the 
partial human sck cDNA is shown (3). hShcA [SEQ ID NO:8] represents the 
predicted peptide sequence of the humanshcA gene (pelicci). Sequences were 
aligned using the Pileup program of GCG software analysis package. The 
results of this comparison were imported into the Maligned multiple 
sequence alignment program. Amino acids which are identical in at least 4 
of 5 sequences are shown in reverse type. Boundaries of the SH2 and PTB 
domains are marked with arrows. 
FIG. 2A 
ShcC RNA is specifically expressed in brain tissues. Northern analysis. 
Filters were hybridized, washed under stringent conditions then exposed at 
-70.degree. C. with an intensifying screen for 48 hrs for shcB or 
overnight for ShcC. Arrow mark the position of the two ShcC transcripts. 
Lanes are as follows: 1. Heart; 2. Brain; 3. Spleen; 4. Lung; 5. Liver; 6. 
Skeletal muscle; 7. Kidney; and, 8. Testis. 
FIG. 2B 
ShcC RNA is specifically expressed in brain tissues. RT-PCR analysis. PCR 
products were fractionated on an agarose gel and stained with ethidium 
bromide to visualize bands. Molecular weight markers (in base pairs) are 
shown to the left. 
FIG. 3A 
ShcC proteins are specifically expressed in brain derived tissues. Fifty 
micrograms of total protein from each of the indicated mouse tissues, 
except for adrenal and eye which only had 25 mg, was fractionated on 10% 
SDS-PAGE, transfered to filters and probed with affinity purified ShcC 
antibody (1 mg/ml in TBST/3% non-fat dry milk). Lanes are as follows: 1. 
adrenal; 2. cerebellum; 3. cerebrum; 4. forebrain; 5. eye; 6. spinal cord; 
7. heart; 8. intestine; 9. kidney; 10. liver; 11. lung; 12. pancreas; 13. 
spleen and 14. stomach. 
FIG. 3B 
ShcC proteins are specifically expressed in brain derived tissues. Same as 
in FIG. 3A except Protein-A Sepharose purified anti-Shc antibody was used 
at 1-2 mg/ml. Lanes are as follows: 1. adrenal; 2. cerebellum; 3. 
cerebrum; 4. forebrain; 5. eye; 6. spinal cord; 7. heart; 8. intestine; 9. 
kidney; 10. liver; 11. lung; 12. pancreas; 13. spleen and 14. stomach. 
FIG. 4A 
SH2 domains of ShcB and ShcC bind tyrosine phosphorylated proteins. A431 
cells were grown in the presence or absence of EGF (100 ng/ml) for 1 min 
then lysed in cold PLC-LB. Equal amounts of fusion proteins were mixed 
with equivalent amounts of lysate, spun down washed, fractionated on 10% 
SDS-PAGE then probed with the indicated antibodies. Anti-GST is shown to 
confirm that equal amounts of fusion proteins were used in the mixes. 
FIG. 4B 
Shc family members bind differentially to tyrosine phosphorylated proteins. 
Binding experiments were performed as in FIG. 4A except with lysates of 
NIH/3T3 cells transformed by the Axl tyrosine kinase receptor. 
FIG. 5A 
The PTB domains of ShcC and ShcA bind to activated growth factor receptors. 
In vitro binding experiments were performed as described for FIG. 4A. 
Equivalent amounts of lysate from EGF-stimulated A431 cells were incubated 
with 10 .mu.g of either ShcA or ShcC GST-PTB fusion proteins. Bound 
proteins weree fractionated on SDS-PAGE then transferred to Immobilon 
which was probed with anti-phosphotyrosine antibody. No binding was seen 
with GST alone (data not shown). 
FIG. 5B 
The PTB domains of ShcC and ShcA bind to activated growth factor receptors. 
In vitro binding experiments were performed as in FIG. 5A using lysates 
from NIH/3T3 cells which overexpress TrkA (23). Lysates from cells treated 
with, +, or without, -, NGF (100 ng/ml) were incubated with the indicated 
GST-PTB fusion protein either in the presence, +, or absence, -, of 
competing phosphopeptide. The filter was probed with anti-phosphotyrosine 
antibody. Anti-TrkA antibody was also used to confirm that the tyrosine 
phosphorylated pp140 and pp110 proteins were the TrkA mature form and 
precursor (data not shown). TrkA is tyrosine phosphorylated in these cells 
even prior to NGF stimulation, possibly owing to the high receptor 
density. 
FIGS. 8A and 8B 
Effect of dominant negatives on Gal-Elk activation by EGF in 293T cells. 
8A. The various dominant negative constructs were tested for their effect 
on Gal-Elk activation. 8B. To ensure that these constructs were specific, 
their effect on activation of Gal-Elk by activated Hras61L, which should 
be refractory to the effects of these protein, was tested. 
FIG. 9 
Effect of ShcC dominant negative proteins on the in vitro kinase activity 
of HA-MAPK. The counts from untransfected controls were subtracted as 
background. 
FIG. 10 
Inhibition of soft agar growth. NIH/3T3 cells transformed by overexpression 
of the EGFR were transfected with either vector, PTB or SH2 selected. 
Stable cell lines were plated in soft agar assays (10.sup.4 cells per 
well). Quantitation of colony formation. After 34 weeks the colonies were 
stained with MTT (thiazol blue) and counted. 
FIG. 11 
ShcC activation of MAPK. Gal-Elk activation by EGF was measured as 
described in Example 2. Cells were cotransfected with the reporter 
constructs along with either empty vector or the ShcC full-length cDNA. 
Cells were then starved and then treated with or without EGF (100 ng/ml) 
for 4-5 hours at 37.degree. C. Samples were processed as described in 
Example 2. 
FIG. 12 
Mutations in the PTB domain differentially affect phosphotyrosine versus 
phospholipid binding. The values for binding were normalized to wild type 
after subtraction of background, i.e. GST. 
FIG. 13 
Membrane localization of the ShcC PTB domain. EGFR transformed cells 
expressing the ShcC PTB domain were fractionated into membrane and 
cytosolic fractions following growth factor stimulation. Equivalent 
amounts of protein were loaded in each lane. The blot was probed with a 
monoclonal HA antibody which recognizes the HA epitope tag on the NH.sub.2 
-terminus of the PTB. 
FIG. 14 
The ShcC PTB domain is tyrosine phosphorylated in Src527F expressing 293T 
cells. 293T cells were transfected with either the HA epitope-tagged PTB 
domain (lanes 1, 2, 5) or HA epitope-tagged SH2 domain (lanes 3 & 4). The 
cells in lane 5 were cotransfected with activated Src527F. Samples were 
immunoprecipitated with HA monoclonal antibody (Babco) and then Western 
blotted with the indicated antibodies. 
FIG. 15 
Immunoprecipitated EGFR does not phosphorylate the ShcC PTB domain in an in 
vitro kinase reaction. The EGFR was immunopurified and then incubated with 
either purified GST or GST-PTB domain. The samples were then subjected to 
an in vitro kinase reaction and analyzed as described in Example 3. The 
location of the GST and GST-PTB proteins are marked with arrows to the 
right of the gel. 
FIGS. 16A, 16B, 16C 
Shc family members are differentially expressed. 16A. Western blot analysis 
of mouse tissues using a ShcA antibody. 16B. Same as 16A except blot was 
probed with ShcC antibody. 16C. Analysis of ShcC (top panel) and ShcA 
(bottom panel) protein expression in cell lines. 
FIGS. 17A, 17B 
ShcC expression in adult and embryonic mouse tissues. Frozen sections of 
either adult (17A) or embryonic E18 (17B) CD1 mouse tissues were stained 
with affinity purified ShcC antibody. As indicated by arrows in the 
sections, many regions of the adult and embryonic brain are positive for 
ShcC expression. Furthermore, additional embryonic tissues, such as the 
neck muscles and muscles surrounding the intestine (not shown), are also 
positive for ShcC expression. 17A. Transverse section of the adult brain. 
17B. Sagittal section of the embryonic brain. 
FIGS. 18A, 18B, 18C, 18D 
Immunostaining indicates that there is an increase in the expression of 
ShcC as the cortical neurons differentiate in vitro. Mouse cortical 
neurons were cultured on a monolayer of rat astrocytes and observed at 
different times for the level of ShcC expression by immunocytochemistry. 
Even after 6 days in vitro, very little ShcC immunostaining is apparent 
(18A) but by 9 days prominent staining is seen in the soma (18B). At later 
time points, 12 days (18C) and 15 days (18D), robust staining is seen in 
the soma of most of the neurons in the culture. The neurites (fibrous 
processes) also contain significant levels of ShcC immunostaining at the 
later time points (18C & 18D). The mouse/rat astrocyte and microglia 
cultures failed to produce any detectable immunostaining even at twice the 
concentration of anti-ShcC antibody used for immunostaining of the 
neuronal cultures. 
__________________________________________________________________________ 
# SEQUENCE LISTING 
- (1) GENERAL INFORMATION: 
- (iii) NUMBER OF SEQUENCES: 18 
- (2) INFORMATION FOR SEQ ID NO:1: 
- (i) SEQUENCE CHARACTERISTICS: 
#pairs (A) LENGTH: 1535 base 
(B) TYPE: nucleic acid 
(C) STRANDEDNESS: double 
(D) TOPOLOGY: linear 
- (ii) MOLECULE TYPE: cDNA 
- (ix) FEATURE: 
(A) NAME/KEY: CDS 
(B) LOCATION: 4..1425 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:1: 
- GTG ATG AGT GCC ACC AGG AAG AGC CGG GCC GG - #C GAC GAG CCA CTG CCC 
48 
#Ala Gly Asp Glu Pro Leu ProSer Arg 
# 15 
- AGG CCC CCT CGG GGC GCG CCG CAC ACC AGC GA - #T CAG GTG CTG GGG CCG 
96 
Arg Pro Pro Arg Gly Ala Pro His Thr Ser As - #p Gln Val Leu Gly Pro 
# 30 
- GGA GTC ACC TAT GTG GTC AAG TAC TTG GGC TG - #C ATC GAA GTT CTG CGC 
144 
Gly Val Thr Tyr Val Val Lys Tyr Leu Gly Cy - #s Ile Glu Val Leu Arg 
# 45 
- TCA ATG AGG TCT CTT GAC TTC AGT ACA AGA AC - #T CAG GTT ACC AGG GAA 
192 
Ser Met Arg Ser Leu Asp Phe Ser Thr Arg Th - #r Gln Val Thr Arg Glu 
# 60 
- GCC ATC AGC CGT GTC TGC GAA CGT GTG CCA GG - #T GCC AAA GGA GCC CTC 
240 
Ala Ile Ser Arg Val Cys Glu Arg Val Pro Gl - #y Ala Lys Gly Ala Leu 
# 75 
- AAG AAG AGA AAG CCG CCG AGT AAG ATG CTG TC - #C AGC ATC CTG GGG AAG 
288 
Lys Lys Arg Lys Pro Pro Ser Lys Met Leu Se - #r Ser Ile Leu Gly Lys 
# 95 
- AGC AAC CTC CAG TTC GCA GGG ATG AGC ATC TC - #C CTG ACC ATC TCC ACC 
336 
Ser Asn Leu Gln Phe Ala Gly Met Ser Ile Se - #r Leu Thr Ile Ser Thr 
# 110 
- GCC AGC CTG AAT CTG CGC ACT CCT GAC TCC AA - #A CAG ATC ATA GCG AAC 
384 
Ala Ser Leu Asn Leu Arg Thr Pro Asp Ser Ly - #s Gln Ile Ile Ala Asn 
# 125 
- CAT CAT ATG CGG TCT ATC TCT TTT GCC TCA GG - #G GGA GAC CCG GAC ACA 
432 
His His Met Arg Ser Ile Ser Phe Ala Ser Gl - #y Gly Asp Pro Asp Thr 
# 140 
- ACG GAC TAT GTT GCC TAT GTC GCT AAG GAC CC - #T GTC AAT CGC AGA GCT 
480 
Thr Asp Tyr Val Ala Tyr Val Ala Lys Asp Pr - #o Val Asn Arg Arg Ala 
# 155 
- TGC CAC ATT CTG GAA TGC TGT GAC GGG CTA GC - #C CAA GAT GTC ATT GGC 
528 
Cys His Ile Leu Glu Cys Cys Asp Gly Leu Al - #a Gln Asp Val Ile Gly 
160 1 - #65 1 - #70 1 - 
#75 
- TCC ATC GGA CAA GCC TTT GAA CTC CGG TTC AA - #A CAG TAT TTG CAG TGC 
576 
Ser Ile Gly Gln Ala Phe Glu Leu Arg Phe Ly - #s Gln Tyr Leu Gln Cys 
# 190 
- CCT TCC AAG GTT CCT GCC CTC CAG GAC CGA AT - #G CAG AGT CTG GAT GAG 
624 
Pro Ser Lys Val Pro Ala Leu Gln Asp Arg Me - #t Gln Ser Leu Asp Glu 
# 205 
- CCA TGG ACT GAA GAA GAG GGA GAT GGC CCT GA - #T CAC CCA TAC TAC AAC 
672 
Pro Trp Thr Glu Glu Glu Gly Asp Gly Pro As - #p His Pro Tyr Tyr Asn 
# 220 
- AGC GTT CCC ACC AAG ATG CCT CCC CCA GGG GG - #G TTT CTG GAT GCT CGA 
720 
Ser Val Pro Thr Lys Met Pro Pro Pro Gly Gl - #y Phe Leu Asp Ala Arg 
# 235 
- TTG AAA GGC AGA CCC CAC GCT CCT GAG GCA GC - #C CAG TTT GCA GGA AAA 
768 
Leu Lys Gly Arg Pro His Ala Pro Glu Ala Al - #a Gln Phe Ala Gly Lys 
240 2 - #45 2 - #50 2 - 
#55 
- GAG CAA ACT TAT TAC CAG GGA AGA CAC TTA GG - #A GAT ACA TTT GGT GAA 
816 
Glu Gln Thr Tyr Tyr Gln Gly Arg His Leu Gl - #y Asp Thr Phe Gly Glu 
# 270 
- GAC TGG CAG CGA GCA CCC ACC AGG CAA GGC TC - #C TTG GAC ATC TAT AGC 
864 
Asp Trp Gln Arg Ala Pro Thr Arg Gln Gly Se - #r Leu Asp Ile Tyr Ser 
# 285 
- ACA GCA GAA GGG AAA ACT CAC ATG GTT CCT GT - #A GGA GAA ACA CCA ACC 
912 
Thr Ala Glu Gly Lys Thr His Met Val Pro Va - #l Gly Glu Thr Pro Thr 
# 300 
- TAT GTC AAC ACC CAG CCA GTC CCA CCA CAG GT - #G TGG CCA GCA GCA ACC 
960 
Tyr Val Asn Thr Gln Pro Val Pro Pro Gln Va - #l Trp Pro Ala Ala Thr 
# 315 
- AGC AGC ACT GAG AGC AGC CCA CGG AAG GAC CT - #C TTT GAC ATG AAG CCC 
1008 
Ser Ser Thr Glu Ser Ser Pro Arg Lys Asp Le - #u Phe Asp Met Lys Pro 
320 3 - #25 3 - #30 3 - 
#35 
- TTT GAA GAT GCC CTG AGA AAC CAG CCC CTG GG - #C CCC ATG TTG AGC AAA 
1056 
Phe Glu Asp Ala Leu Arg Asn Gln Pro Leu Gl - #y Pro Met Leu Ser Lys 
# 350 
- GCC GCG TCT GTG GAG TGC ATC AGC CCG GTC AC - #A CCC AGA GCC CCG GAT 
1104 
Ala Ala Ser Val Glu Cys Ile Ser Pro Val Th - #r Pro Arg Ala Pro Asp 
# 365 
- GCC AGG ATG CTG GAG GAG CTT AAC GCT GAG CC - #C TGG TAC CAA GGA GAG 
1152 
Ala Arg Met Leu Glu Glu Leu Asn Ala Glu Pr - #o Trp Tyr Gln Gly Glu 
# 380 
- ATG AGC AGG AAG GAG GCA GAG GCC CTG CTA CG - #G GAA GAT GGA GAC TTC 
1200 
Met Ser Arg Lys Glu Ala Glu Ala Leu Leu Ar - #g Glu Asp Gly Asp Phe 
# 395 
- CTA GTG AGG AAG AGT ACC ACC AAC CCC GGC TC - #C TTT GTC CTC ACA GGC 
1248 
Leu Val Arg Lys Ser Thr Thr Asn Pro Gly Se - #r Phe Val Leu Thr Gly 
400 4 - #05 4 - #10 4 - 
#15 
- ATG CAC AAT GGG CAG GCC AAG CAC CTG CTG CT - #G GTG GAC CCG GAA GGC 
1296 
Met His Asn Gly Gln Ala Lys His Leu Leu Le - #u Val Asp Pro Glu Gly 
# 430 
- ACG ATC CGG ACG AAG GAC AGG GTC TTT GAC AG - #C ATC AGC CAC CTC ATC 
1344 
Thr Ile Arg Thr Lys Asp Arg Val Phe Asp Se - #r Ile Ser His Leu Ile 
# 445 
- AAT TAC CAC CTC GAG AGC AGC CTG CCC ATT GT - #C TCT GCC GGG AGT GAG 
1392 
Asn Tyr His Leu Glu Ser Ser Leu Pro Ile Va - #l Ser Ala Gly Ser Glu 
# 460 
- CTT TGT CTC CAG CAA CCA GTG GAG AGG AAA CC - #C TGAGCTTGCC CAGCGCCCCA 
1445 
Leu Cys Leu Gln Gln Pro Val Glu Arg Lys Pr - #o 
# 470 
- GCCCCCATAC CTTATGCCAG GTCAGGAAGA CTGGCTCTGC GGCTCTCAGC CT - #ATGGAAAT 
1505 
# 1535 CCAT CACATTAAAG 
- (2) INFORMATION FOR SEQ ID NO:2: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 474 amino 
(B) TYPE: amino acid 
(D) TOPOLOGY: linear 
- (ii) MOLECULE TYPE: protein 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:2: 
- Met Ser Ala Thr Arg Lys Ser Arg Ala Gly As - #p Glu Pro Leu Pro Arg 
# 15 
- Pro Pro Arg Gly Ala Pro His Thr Ser Asp Gl - #n Val Leu Gly Pro Gly 
# 30 
- Val Thr Tyr Val Val Lys Tyr Leu Gly Cys Il - #e Glu Val Leu Arg Ser 
# 45 
- Met Arg Ser Leu Asp Phe Ser Thr Arg Thr Gl - #n Val Thr Arg Glu Ala 
# 60 
- Ile Ser Arg Val Cys Glu Arg Val Pro Gly Al - #a Lys Gly Ala Leu Lys 
# 80 
- Lys Arg Lys Pro Pro Ser Lys Met Leu Ser Se - #r Ile Leu Gly Lys Ser 
# 95 
- Asn Leu Gln Phe Ala Gly Met Ser Ile Ser Le - #u Thr Ile Ser Thr Ala 
# 110 
- Ser Leu Asn Leu Arg Thr Pro Asp Ser Lys Gl - #n Ile Ile Ala Asn His 
# 125 
- His Met Arg Ser Ile Ser Phe Ala Ser Gly Gl - #y Asp Pro Asp Thr Thr 
# 140 
- Asp Tyr Val Ala Tyr Val Ala Lys Asp Pro Va - #l Asn Arg Arg Ala Cys 
145 1 - #50 1 - #55 1 - 
#60 
- His Ile Leu Glu Cys Cys Asp Gly Leu Ala Gl - #n Asp Val Ile Gly Ser 
# 175 
- Ile Gly Gln Ala Phe Glu Leu Arg Phe Lys Gl - #n Tyr Leu Gln Cys Pro 
# 190 
- Ser Lys Val Pro Ala Leu Gln Asp Arg Met Gl - #n Ser Leu Asp Glu Pro 
# 205 
- Trp Thr Glu Glu Glu Gly Asp Gly Pro Asp Hi - #s Pro Tyr Tyr Asn Ser 
# 220 
- Val Pro Thr Lys Met Pro Pro Pro Gly Gly Ph - #e Leu Asp Ala Arg Leu 
225 2 - #30 2 - #35 2 - 
#40 
- Lys Gly Arg Pro His Ala Pro Glu Ala Ala Gl - #n Phe Ala Gly Lys Glu 
# 255 
- Gln Thr Tyr Tyr Gln Gly Arg His Leu Gly As - #p Thr Phe Gly Glu Asp 
# 270 
- Trp Gln Arg Ala Pro Thr Arg Gln Gly Ser Le - #u Asp Ile Tyr Ser Thr 
# 285 
- Ala Glu Gly Lys Thr His Met Val Pro Val Gl - #y Glu Thr Pro Thr Tyr 
# 300 
- Val Asn Thr Gln Pro Val Pro Pro Gln Val Tr - #p Pro Ala Ala Thr Ser 
305 3 - #10 3 - #15 3 - 
#20 
- Ser Thr Glu Ser Ser Pro Arg Lys Asp Leu Ph - #e Asp Met Lys Pro Phe 
# 335 
- Glu Asp Ala Leu Arg Asn Gln Pro Leu Gly Pr - #o Met Leu Ser Lys Ala 
# 350 
- Ala Ser Val Glu Cys Ile Ser Pro Val Thr Pr - #o Arg Ala Pro Asp Ala 
# 365 
- Arg Met Leu Glu Glu Leu Asn Ala Glu Pro Tr - #p Tyr Gln Gly Glu Met 
# 380 
- Ser Arg Lys Glu Ala Glu Ala Leu Leu Arg Gl - #u Asp Gly Asp Phe Leu 
385 3 - #90 3 - #95 4 - 
#00 
- Val Arg Lys Ser Thr Thr Asn Pro Gly Ser Ph - #e Val Leu Thr Gly Met 
# 415 
- His Asn Gly Gln Ala Lys His Leu Leu Leu Va - #l Asp Pro Glu Gly Thr 
# 430 
- Ile Arg Thr Lys Asp Arg Val Phe Asp Ser Il - #e Ser His Leu Ile Asn 
# 445 
- Tyr His Leu Glu Ser Ser Leu Pro Ile Val Se - #r Ala Gly Ser Glu Leu 
# 460 
- Cys Leu Gln Gln Pro Val Glu Arg Lys Pro 
465 4 - #70 
- (2) INFORMATION FOR SEQ ID NO:3: 
- (i) SEQUENCE CHARACTERISTICS: 
#pairs (A) LENGTH: 1662 base 
(B) TYPE: nucleic acid 
(C) STRANDEDNESS: double 
(D) TOPOLOGY: linear 
- (ii) MOLECULE TYPE: cDNA 
- (ix) FEATURE: 
(A) NAME/KEY: mat.sub.-- - #peptide 
(B) LOCATION: 1 
- (ix) FEATURE: 
(A) NAME/KEY: CDS 
(B) LOCATION: join(1..1470 - #, 1474..1479, 1483..1656) 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:3: 
- CGC TGC CGG GGC TCG GGG ACG CGG GGC GCG CG - #G GTG ACT CCG GAT GTC 
48 
Arg Cys Arg Gly Ser Gly Thr Arg Gly Ala Ar - #g Val Thr Pro Asp Val 
# 15 
- GCT GAC GAG TGG GTG CGC AAG GGC GGC TTC AT - #T CAC AAG CCG GCG CAC 
96 
Ala Asp Glu Trp Val Arg Lys Gly Gly Phe Il - #e His Lys Pro Ala His 
# 30 
- GGC TGG TTG CAT CCC GAT GCC AGG GTC CTG GG - #G CCC GGG GTC TCT TAC 
144 
Gly Trp Leu His Pro Asp Ala Arg Val Leu Gl - #y Pro Gly Val Ser Tyr 
# 45 
- ATC GTT CGG TAC ATG GGC TGC ATT GAG GTG CT - #T CGA TCC ATG CGC TCC 
192 
Ile Val Arg Tyr Met Gly Cys Ile Glu Val Le - #u Arg Ser Met Arg Ser 
# 60 
- CTG GAT TTC AAC ACC CGA ACA CAG GTG ACG AG - #G GAA GCC ATC AAT CGG 
240 
Leu Asp Phe Asn Thr Arg Thr Gln Val Thr Ar - #g Glu Ala Ile Asn Arg 
# 80 
- CTC CAT GAG GCT GTG CCC GGT GTC CGG GGC TC - #C TGG AAG AAG AAG GCC 
288 
Leu His Glu Ala Val Pro Gly Val Arg Gly Se - #r Trp Lys Lys Lys Ala 
# 95 
- CCC AAC AAG GCT CTG GCC TCC ATC TTG GGG AA - #A AGC AAC CTG CGC TTC 
336 
Pro Asn Lys Ala Leu Ala Ser Ile Leu Gly Ly - #s Ser Asn Leu Arg Phe 
# 110 
- GCC GGC ATG AGC ATC TCA GTC AAC ATC TCC GT - #G GAC GGC CTT AAC TTG 
384 
Ala Gly Met Ser Ile Ser Val Asn Ile Ser Va - #l Asp Gly Leu Asn Leu 
# 125 
- TCT GTT CCC GCC ACC CGC CAG ATC ATC GCC AA - #C CAT CAT ATG CAG TCT 
432 
Ser Val Pro Ala Thr Arg Gln Ile Ile Ala As - #n His His Met Gln Ser 
# 140 
- ATT TCC TTC GCC TCG GGT GGT GAC ACG GAC AT - #G ACT GAT TAC GTG GCC 
480 
Ile Ser Phe Ala Ser Gly Gly Asp Thr Asp Me - #t Thr Asp Tyr Val Ala 
145 1 - #50 1 - #55 1 - 
#60 
- TAT GTG GCC AAG GAC CCC ATC AAC CAG AGA GC - #C TGC CAC ATC TTG GAA 
528 
Tyr Val Ala Lys Asp Pro Ile Asn Gln Arg Al - #a Cys His Ile Leu Glu 
# 175 
- TGC TGT GAA GGT CTT GCC CAG AGC GTC ATC AG - #C ACC GTA GGG CAA GCC 
576 
Cys Cys Glu Gly Leu Ala Gln Ser Val Ile Se - #r Thr Val Gly Gln Ala 
# 190 
- TTT GAG CTG CGC TTC AAG CAA TAC CTG CAC AG - #T CCG CCC AAG GCG GTA 
624 
Phe Glu Leu Arg Phe Lys Gln Tyr Leu His Se - #r Pro Pro Lys Ala Val 
# 205 
- GTG CCC CCT GAA AGG CTG ACT GGG CTG GAG GA - #G TTG GCC TGG GGA GAT 
672 
Val Pro Pro Glu Arg Leu Thr Gly Leu Glu Gl - #u Leu Ala Trp Gly Asp 
# 220 
- GAT GAC GCT GCT GCA GAC CAC AAT TAC TAC AA - #C AGC ATT CCG GGA AAG 
720 
Asp Asp Ala Ala Ala Asp His Asn Tyr Tyr As - #n Ser Ile Pro Gly Lys 
225 2 - #30 2 - #35 2 - 
#40 
- GAG CCA CCC CTG GGC GGG CTG GTG GAC TCC AG - #A CTG GCT GTC ACA CAG 
768 
Glu Pro Pro Leu Gly Gly Leu Val Asp Ser Ar - #g Leu Ala Val Thr Gln 
# 255 
- CCC TGT GCG CTG GCG ACA CTC GGG GGC CTT GG - #A CAG GGA ATG ACA CCA 
816 
Pro Cys Ala Leu Ala Thr Leu Gly Gly Leu Gl - #y Gln Gly Met Thr Pro 
# 270 
- GTA TGG AGA GAT GCC CGT GGC TTG CCT TGG GA - #C ATG GGC CCC TCT GGA 
864 
Val Trp Arg Asp Ala Arg Gly Leu Pro Trp As - #p Met Gly Pro Ser Gly 
# 285 
- GCA GCC CCA CCG GGG GAT GGC TAC GTG CAG GC - #A GAT GCC CGA GGG CCA 
912 
Ala Ala Pro Pro Gly Asp Gly Tyr Val Gln Al - #a Asp Ala Arg Gly Pro 
# 300 
- CAT GAC TAC GAG GAG CAC CTG TAT GTC AAT AC - #C CAG GGC CTG GAT GCT 
960 
His Asp Tyr Glu Glu His Leu Tyr Val Asn Th - #r Gln Gly Leu Asp Ala 
305 3 - #10 3 - #15 3 - 
#20 
- GTG GAG CTT GAG GAC ACC GCC GAG GCA CCT CT - #G CAG TTT GAG GAC AGC 
1008 
Val Glu Leu Glu Asp Thr Ala Glu Ala Pro Le - #u Gln Phe Glu Asp Ser 
# 335 
- CCC AAG AAG GAC CTG TTT GAC ATG CGA CCC TT - #T GAA GAT GCC CTG AAG 
1056 
Pro Lys Lys Asp Leu Phe Asp Met Arg Pro Ph - #e Glu Asp Ala Leu Lys 
# 350 
- TTG CAC GCG TGC TCA GTG GCA GCC GGC ATC AC - #T GCA GCC TCA CCC CCT 
1104 
Leu His Ala Cys Ser Val Ala Ala Gly Ile Th - #r Ala Ala Ser Pro Pro 
# 365 
- CTG GAA GAC CAG TGG CCC AGT CCC CCT ACC CG - #C AGG GCC CCC ATT GCA 
1152 
Leu Glu Asp Gln Trp Pro Ser Pro Pro Thr Ar - #g Arg Ala Pro Ile Ala 
# 380 
- CCC ACA GAG GAG CAA TTG AGG CAG GAG CCC TG - #G TAC CAC GGA CGA ATG 
1200 
Pro Thr Glu Glu Gln Leu Arg Gln Glu Pro Tr - #p Tyr His Gly Arg Met 
385 3 - #90 3 - #95 4 - 
#00 
- AGC CGT CGG GCT GCA GAG AAG CTG CTT CGG GC - #C GAT GGG GAC TTC CTT 
1248 
Ser Arg Arg Ala Ala Glu Lys Leu Leu Arg Al - #a Asp Gly Asp Phe Leu 
# 415 
- GTG AGA GAC AGC GTC ACC AAC CCG GGG CAG TA - #T GTC CTC ACG GGC ATG 
1296 
Val Arg Asp Ser Val Thr Asn Pro Gly Gln Ty - #r Val Leu Thr Gly Met 
# 430 
- CAT GCG GGG CAG CCC AAG CAC CTG CTG CTG GT - #G GAC CCC GAG GGT GTG 
1344 
His Ala Gly Gln Pro Lys His Leu Leu Leu Va - #l Asp Pro Glu Gly Val 
# 445 
- GTG CGG ACG AAA GAT GTG TTG TTT GAG AGC AT - #C AGC CAC CTC ATA GAC 
1392 
Val Arg Thr Lys Asp Val Leu Phe Glu Ser Il - #e Ser His Leu Ile Asp 
# 460 
- TAT CAC CTG AAG AAT GGG CTG CCT ATC GTG GC - #T GCT GAG AGC GAG CTG 
1440 
Tyr His Leu Lys Asn Gly Leu Pro Ile Val Al - #a Ala Glu Ser Glu Leu 
465 4 - #70 4 - #75 4 - 
#80 
- CAT CTG CGG GGA GTG GTC TCT CGG GAG CCA TG - #A GCC AGG TGA CAG TCC 
1488 
# Ala Arg Gln Ser Ser Arg Glu Pro 
# 490 
- TCA CCC CAA CTT CTA CCC CTA GAT GCC CTT GC - #T GAG GCC TTT CTC TCA 
1536 
Ser Pro Gln Leu Leu Pro Leu Asp Ala Leu Al - #a Glu Ala Phe Leu Ser 
495 5 - #00 5 - #05 5 - 
#10 
- GAT CCT GAA GCC ACG AGA ACC AGA ATG GTT AC - #C ACC TCT CCT TCC ACA 
1584 
Asp Pro Glu Ala Thr Arg Thr Arg Met Val Th - #r Thr Ser Pro Ser Thr 
# 525 
- CGA GCC CTC GGG AAG CCG CCT TTC CCA GCT GT - #G CTC GCT CAG CTG GGG 
1632 
Arg Ala Leu Gly Lys Pro Pro Phe Pro Ala Va - #l Leu Ala Gln Leu Gly 
# 540 
# 1662 AA TTC GCC CTA TAGTGA 
Gly Pro Gly Thr Gln Phe Ala Leu 
# 550 
- (2) INFORMATION FOR SEQ ID NO:4: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 550 amino 
(B) TYPE: amino acid 
(D) TOPOLOGY: linear 
- (ii) MOLECULE TYPE: protein 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:4: 
- Arg Cys Arg Gly Ser Gly Thr Arg Gly Ala Ar - #g Val Thr Pro Asp Val 
# 15 
- Ala Asp Glu Trp Val Arg Lys Gly Gly Phe Il - #e His Lys Pro Ala His 
# 30 
- Gly Trp Leu His Pro Asp Ala Arg Val Leu Gl - #y Pro Gly Val Ser Tyr 
# 45 
- Ile Val Arg Tyr Met Gly Cys Ile Glu Val Le - #u Arg Ser Met Arg Ser 
# 60 
- Leu Asp Phe Asn Thr Arg Thr Gln Val Thr Ar - #g Glu Ala Ile Asn Arg 
# 80 
- Leu His Glu Ala Val Pro Gly Val Arg Gly Se - #r Trp Lys Lys Lys Ala 
# 95 
- Pro Asn Lys Ala Leu Ala Ser Ile Leu Gly Ly - #s Ser Asn Leu Arg Phe 
# 110 
- Ala Gly Met Ser Ile Ser Val Asn Ile Ser Va - #l Asp Gly Leu Asn Leu 
# 125 
- Ser Val Pro Ala Thr Arg Gln Ile Ile Ala As - #n His His Met Gln Ser 
# 140 
- Ile Ser Phe Ala Ser Gly Gly Asp Thr Asp Me - #t Thr Asp Tyr Val Ala 
145 1 - #50 1 - #55 1 - 
#60 
- Tyr Val Ala Lys Asp Pro Ile Asn Gln Arg Al - #a Cys His Ile Leu Glu 
# 175 
- Cys Cys Glu Gly Leu Ala Gln Ser Val Ile Se - #r Thr Val Gly Gln Ala 
# 190 
- Phe Glu Leu Arg Phe Lys Gln Tyr Leu His Se - #r Pro Pro Lys Ala Val 
# 205 
- Val Pro Pro Glu Arg Leu Thr Gly Leu Glu Gl - #u Leu Ala Trp Gly Asp 
# 220 
- Asp Asp Ala Ala Ala Asp His Asn Tyr Tyr As - #n Ser Ile Pro Gly Lys 
225 2 - #30 2 - #35 2 - 
#40 
- Glu Pro Pro Leu Gly Gly Leu Val Asp Ser Ar - #g Leu Ala Val Thr Gln 
# 255 
- Pro Cys Ala Leu Ala Thr Leu Gly Gly Leu Gl - #y Gln Gly Met Thr Pro 
# 270 
- Val Trp Arg Asp Ala Arg Gly Leu Pro Trp As - #p Met Gly Pro Ser Gly 
# 285 
- Ala Ala Pro Pro Gly Asp Gly Tyr Val Gln Al - #a Asp Ala Arg Gly Pro 
# 300 
- His Asp Tyr Glu Glu His Leu Tyr Val Asn Th - #r Gln Gly Leu Asp Ala 
305 3 - #10 3 - #15 3 - 
#20 
- Val Glu Leu Glu Asp Thr Ala Glu Ala Pro Le - #u Gln Phe Glu Asp Ser 
# 335 
- Pro Lys Lys Asp Leu Phe Asp Met Arg Pro Ph - #e Glu Asp Ala Leu Lys 
# 350 
- Leu His Ala Cys Ser Val Ala Ala Gly Ile Th - #r Ala Ala Ser Pro Pro 
# 365 
- Leu Glu Asp Gln Trp Pro Ser Pro Pro Thr Ar - #g Arg Ala Pro Ile Ala 
# 380 
- Pro Thr Glu Glu Gln Leu Arg Gln Glu Pro Tr - #p Tyr His Gly Arg Met 
385 3 - #90 3 - #95 4 - 
#00 
- Ser Arg Arg Ala Ala Glu Lys Leu Leu Arg Al - #a Asp Gly Asp Phe Leu 
# 415 
- Val Arg Asp Ser Val Thr Asn Pro Gly Gln Ty - #r Val Leu Thr Gly Met 
# 430 
- His Ala Gly Gln Pro Lys His Leu Leu Leu Va - #l Asp Pro Glu Gly Val 
# 445 
- Val Arg Thr Lys Asp Val Leu Phe Glu Ser Il - #e Ser His Leu Ile Asp 
# 460 
- Tyr His Leu Lys Asn Gly Leu Pro Ile Val Al - #a Ala Glu Ser Glu Leu 
465 4 - #70 4 - #75 4 - 
#80 
- His Leu Arg Gly Val Val Ser Arg Glu Pro Al - #a Arg Gln Ser Ser Pro 
# 495 
- Gln Leu Leu Pro Leu Asp Ala Leu Ala Glu Al - #a Phe Leu Ser Asp Pro 
# 510 
- Glu Ala Thr Arg Thr Arg Met Val Thr Thr Se - #r Pro Ser Thr Arg Ala 
# 525 
- Leu Gly Lys Pro Pro Phe Pro Ala Val Leu Al - #a Gln Leu Gly Gly Pro 
# 540 
- Gly Thr Gln Phe Ala Leu 
545 5 - #50 
- (2) INFORMATION FOR SEQ ID NO:5: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 431 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: protein 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:5: 
- Pro Gly Ser Gly Asp Ala Ala Ala Ala Ala Gl - #u Trp Ile Arg Lys Gly 
# 15 
- Ser Phe Ile His Lys Pro Ala His Gly Trp Le - #u His Pro Asp Ala Arg 
# 30 
- Val Leu Gly Pro Gly Val Ser Tyr Val Val Ar - #g Tyr Met Gly Cys Ile 
# 45 
- Glu Val Leu Arg Ser Met Arg Ser Leu Asp Ph - #e Asn Thr Arg Thr Gln 
# 60 
- Val Thr Arg Glu Ala Ile Asn Arg Leu His Gl - #u Ala Val Pro Gly Val 
#80 
- Arg Gly Ser Trp Lys Lys Lys Ala Pro Asn Ly - #s Ala Leu Ala Ser Val 
# 95 
- Leu Gly Lys Ser Asn Leu Arg Phe Ala Gly Me - #t Ser Ile Ser Ile His 
# 110 
- Ile Ser Thr Asp Gly Leu Ser Leu Ser Val Pr - #o Ala Thr Arg Gln Val 
# 125 
- Ile Ala Asn His His Met Pro Ser Ile Ser Ph - #e Ala Ser Gly Gly Asp 
# 140 
- Thr Asp Met Thr Asp Tyr Val Ala Tyr Val Al - #a Lys Asp Pro Ile Asn 
145 1 - #50 1 - #55 1 - 
#60 
- Gln Arg Ala Cys His Ile Leu Glu Cys Cys Gl - #u Gly Leu Ala Gln Ser 
# 175 
- Ile Ile Ser Thr Val Gly Gln Ala Phe Glu Le - #u Arg Phe Lys Gln Tyr 
# 190 
- Leu His Ser Pro Pro Lys Val Ala Leu Pro Pr - #o Glu Arg Leu Ala Gly 
# 205 
- Pro Glu Glu Ser Ala Trp Gly Asp Glu Glu As - #p Ser Leu Glu Asp Asp 
# 220 
- His Tyr Tyr Asn Ser Ile Pro Gly Lys Glu Pr - #o Pro Leu Gly Gly Leu 
225 2 - #30 2 - #35 2 - 
#40 
- Val Asp Ser Arg Leu Ala Leu Thr Gln Pro Cy - #s Ala Leu Ala Leu Thr 
# 255 
- Ala Leu Asp Gln Gly Pro Ser Pro Ser Leu Ar - #g Asp Ala Cys Ser Leu 
# 270 
- Pro Trp Asp Val Gly Ser Thr Gly Thr Ala Pr - #o Pro Gly Asp Gly Tyr 
# 285 
- Val Gln Ala Asp Ala Arg Gly Pro Pro Asp Hi - #s Glu Glu His Leu Tyr 
# 300 
- Val Asn Thr Gln Gly Leu Asp Ala Pro Glu Pr - #o Glu Asp Ser Pro Lys 
305 3 - #10 3 - #15 3 - 
#20 
- Lys Asp Leu Phe Asp Met Arg Pro Glu Glu As - #p Ala Leu Lys Leu His 
# 335 
- Glu Cys Ser Val Ala Ala Gly Val Thr Ala Al - #a Pro Leu Pro Leu Glu 
# 350 
- Asp Gln Trp Pro Ser Pro Pro Thr Arg Arg Al - #a Pro Val Ala Pro Thr 
# 365 
- Glu Glu Gln Leu Arg Gln Glu Pro Trp Tyr Hi - #s Gly Arg Met Ser Arg 
# 380 
- Arg Ala Ala Glu Arg Met Leu Arg Ala Asp Gl - #y Asp Phe Leu Val Arg 
385 3 - #90 3 - #95 4 - 
#00 
- Asp Ser Val Thr Asn Pro Gly Gln Tyr Val Le - #u Thr Gly Met His Ala 
# 415 
- Gly Gln Pro Lys His Leu Leu Leu Val Asp Pr - #o Glu Gly Val Val 
# 430 
- (2) INFORMATION FOR SEQ ID NO:6: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 469 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: protein 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:6: 
- Met Asn Lys Leu Ser Gly Gly Gly Gly Arg Ar - #g Thr Arg Val Glu Gly 
# 15 
- Gly Gln Leu Gly Gly Glu Glu Trp Thr Arg Hi - #s Gly Ser Phe Val Asn 
# 30 
- Lys Pro Thr Arg Gly Trp Leu His Pro Asn As - #p Lys Val Met Gly Pro 
# 45 
- Gly Val Ser Tyr Leu Val Arg Tyr Met Gly Cy - #s Val Glu Val Leu Gln 
# 60 
- Ser Met Arg Ala Leu Asp Phe Asn Thr Arg Th - #r Gln Val Thr Arg Glu 
#80 
- Ala Ile Ser Leu Val Cys Glu Ala Val Pro Gl - #y Ala Lys Gly Ala Thr 
# 95 
- Arg Arg Arg Lys Pro Cys Ser Arg Pro Leu Se - #r Ser Ile Leu Gly Arg 
# 110 
- Ser Asn Leu Lys Phe Ala Gly Met Pro Ile Th - #r Leu Thr Val Ser Thr 
# 125 
- Ser Ser Leu Asn Leu Met Ala Ala Asp Cys Ly - #s Gln Ile Ile Ala Asn 
# 140 
- His His Met Gln Ser Ile Ser Phe Ala Ser Gl - #y Gly Asp Pro Asp Thr 
145 1 - #50 1 - #55 1 - 
#60 
- Ala Glu Tyr Val Ala Tyr Val Ala Lys Asp Pr - #o Val Asn Gln Arg Ala 
# 175 
- Cys His Ile Leu Glu Cys Pro Glu Gly Leu Al - #a Gln Asp Val Ile Ser 
# 190 
- Thr Ile Gly Gln Ala Phe Glu Leu Arg Phe Ly - #s Gln Tyr Leu Arg Asn 
# 205 
- Pro Pro Lys Leu Val Thr Pro His Asp Arg Me - #t Ala Gly Phe Asp Gly 
# 220 
- Ser Ala Trp Asp Glu Glu Glu Glu Glu Pro Pr - #o Asp His Gln Tyr Tyr 
225 2 - #30 2 - #35 2 - 
#40 
- Asn Asp Phe Pro Gly Lys Glu Pro Pro Leu Gl - #y Gly Val Val Asp Met 
# 255 
- Arg Leu Arg Glu Gly Ala Ala Arg Pro Thr Le - #u Pro Ser Ala Gln Met 
# 270 
- Ser Ser His Leu Gly Ala Thr Leu Pro Ile Gl - #y Gln His Ala Ala Gly 
# 285 
- Asp His Glu Val Arg Lys Gln Met Leu Pro Pr - #o Pro Pro Cys Pro Gly 
# 300 
- Arg Glu Leu Phe Asp Asp Pro Ser Tyr Val As - #n Ile Gln Asn Leu Asp 
305 3 - #10 3 - #15 3 - 
#20 
- Lys Ala Arg Gln Ala Gly Gly Gly Ala Gly Pr - #o Pro Asn Pro Ser Leu 
# 335 
- Asn Gly Ser Ala Pro Arg Asp Leu Phe Asp Me - #t Lys Pro Phe Glu Asp 
# 350 
- Ala Leu Arg Val Pro Pro Pro Pro Gln Ser Me - #t Ser Met Ala Glu Gln 
# 365 
- Leu Gln Gly Glu Pro Trp Phe His Gly Lys Le - #u Ser Arg Arg Glu Ala 
# 380 
- Glu Ala Leu Leu Gln Leu Asn Gly Asp Phe Le - #u Val Arg Glu Ser Thr 
385 3 - #90 3 - #95 4 - 
#00 
- Thr Thr Pro Gly Gln Tyr Val Leu Thr Gly Le - #u Gln Ser Gly Gln Pro 
# 415 
- Lys His Leu Leu Leu Val Asp Pro Glu Gly Va - #l Val Arg Thr Lys Asp 
# 430 
- His Arg Phe Glu Ser Val Ser His Leu Ile Se - #r Tyr His Met Asp Asn 
# 445 
- His Leu Pro Ile Ile Ser Ala Gly Ser Glu Le - #u Cys Leu Gln Gln Pro 
# 460 
- Val Asp Arg Lys Val 
465 
- (2) INFORMATION FOR SEQ ID NO:7: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 473 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: protein 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:7: 
- Met Asn Lys Leu Ser Gly Gly Gly Gly Arg Ar - #g Thr Arg Val Glu Gly 
# 15 
- Gly Gln Leu Gly Gly Glu Glu Trp Thr Arg Hi - #s Gly Ser Phe Val Asn 
# 30 
- Lys Pro Thr Arg Gly Trp Leu His Pro Asn As - #p Lys Val Met Gly Pro 
# 45 
- Gly Val Ser Tyr Leu Val Arg Tyr Met Gly Cy - #s Val Glu Val Leu Gln 
# 60 
- Ser Met Arg Ala Leu Asp Phe Asn Thr Arg Th - #r Gln Val Thr Arg Glu 
#80 
- Ala Ile Ser Leu Val Cys Glu Ala Val Pro Gl - #y Ala Lys Gly Ala Thr 
# 95 
- Arg Arg Arg Lys Pro Cys Ser Arg Pro Leu Se - #r Ser Ile Leu Gly Arg 
# 110 
- Ser Asn Leu Lys Phe Ala Gly Met Pro Ile Th - #r Leu Thr Val Ser Thr 
# 125 
- Ser Ser Leu Asn Leu Met Ala Ala Asp Cys Ly - #s Gln Ile Ile Ala Asn 
# 140 
- His His Met Gln Ser Ile Ser Phe Ala Ser Gl - #y Gly Asp Pro Asp Thr 
145 1 - #50 1 - #55 1 - 
#60 
- Ala Glu Tyr Val Ala Tyr Val Ala Lys Asp Pr - #o Val Asn Gln Arg Ala 
# 175 
- Cys His Ile Leu Glu Cys Pro Glu Gly Leu Al - #a Gln Asp Val Ile Ser 
# 190 
- Thr Ile Gly Gln Ala Phe Glu Leu Arg Phe Ly - #s Gln Tyr Leu Arg Asn 
# 205 
- Pro Pro Lys Leu Val Thr Pro His Asp Arg Me - #t Ala Gly Phe Asp Gly 
# 220 
- Ser Ala Trp Asp Glu Glu Glu Glu Glu Pro Pr - #o Asp His Gln Tyr Tyr 
225 2 - #30 2 - #35 2 - 
#40 
- Asn Asp Phe Pro Gly Lys Glu Pro Pro Leu Gl - #y Gly Val Val Asp Met 
# 255 
- Arg Leu Arg Glu Gly Ala Ala Pro Gly Ala Al - #a Arg Pro Thr Ala Pro 
# 270 
- Asn Ala Gln Thr Pro Ser His Leu Gly Ala Th - #r Leu Pro Val Gly Gln 
# 285 
- Pro Val Gly Gly Asp Pro Glu Val Arg Lys Gl - #n Met Pro Pro Pro Pro 
# 300 
- Pro Cys Pro Gly Arg Glu Leu Phe Asp Asp Pr - #o Ser Tyr Val Asn Val 
305 3 - #10 3 - #15 3 - 
#20 
- Gln Asn Leu Asp Lys Ala Arg Gln Ala Val Gl - #y Gly Ala Gly Pro Pro 
# 335 
- Asn Pro Ala Ile Asn Gly Ser Ala Pro Arg As - #p Leu Phe Asp Met Lys 
# 350 
- Pro Phe Glu Asp Ala Leu Arg Val Pro Pro Pr - #o Pro Gln Ser Val Ser 
# 365 
- Met Ala Glu Gln Leu Arg Gly Glu Pro Trp Ph - #e His Gly Lys Leu Ser 
# 380 
- Arg Arg Glu Ala Glu Ala Leu Leu Gln Leu As - #n Gly Asp Phe Leu Val 
385 3 - #90 3 - #95 4 - 
#00 
- Arg Glu Ser Thr Thr Thr Pro Gly Gln Tyr Va - #l Leu Thr Gly Leu Gln 
# 415 
- Ser Gly Gln Pro Lys His Leu Leu Leu Val As - #p Pro Glu Gly Val Val 
# 430 
- Arg Thr Lys Asp His Arg Phe Glu Ser Val Se - #r His Leu Ile Ser Tyr 
# 445 
- His Met Asp Asn His Leu Pro Ile Ile Ser Al - #a Gly Ser Glu Leu Cys 
# 460 
- Leu Gln Gln Pro Val Glu Arg Lys Leu 
465 4 - #70 
- (2) INFORMATION FOR SEQ ID NO:8: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 409 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: protein 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:8: 
- Met Pro Lys Asn Gly Asp Ala Gly Asn Arg Se - #r Gly Ser Gly Thr Thr 
# 15 
- Ser Asp Gly Cys Ile Tyr Pro Asp Asp Val Il - #e Met Gly Val Gly Val 
# 30 
- Ala Phe Asn Val Arg Tyr Thr Gly Cys Val Gl - #u Val Lys Thr Ser Met 
# 45 
- Lys Ser Leu Asp Phe Glu Thr Arg Thr Gln Le - #u Ala Arg Glu Cys Ile 
# 60 
- Asn Arg Val Cys Glu Ala Ala Gly Leu Lys Se - #r Ala Gly Lys Arg Arg 
#80 
- Leu Thr Asn Phe Ile Ser Asp Arg Pro Ser Me - #t Gln His Ala Gly Thr 
# 95 
- Asn Ile Ile Ile Asn Val Ser Ser Arg Ala Le - #u Ser Leu Ser Asn Val 
# 110 
- Glu Thr Gly Glu Val Ile Ala Asn His Asn Me - #t Pro Arg Ile Ser Phe 
# 125 
- Ala Ser Gly Gly Asp Asn Asp Thr Leu Asp Ph - #e Leu Ala Tyr Ile Ala 
# 140 
- Lys Asn Glu Asp Glu Trp Arg Ala Cys Tyr Va - #l Leu Glu Cys Ala Gly 
145 1 - #50 1 - #55 1 - 
#60 
- Gly Gln Ser Glu Asp Leu Ile Val Thr Ile Gl - #y Lys Ala Phe Ala Leu 
# 175 
- Arg Phe Asn Ala Leu Ser Arg Leu Asn Asp Pr - #o Ser Ala Asp Cys Asn 
# 190 
- Ile Asn Gln Ser Cys Lys Glu Asn Val Lys Gl - #u Tyr Tyr Asn Asp Leu 
# 205 
- Pro Asn Lys Leu Pro Pro Glu Val Pro Glu Pr - #o Gln Gln Gln Gln Val 
# 220 
- Gln Gln Pro Leu His Pro His Ala Pro Arg Va - #l Ala Gln Leu Asn Leu 
225 2 - #30 2 - #35 2 - 
#40 
- Lys Lys Pro Arg Asp Arg Leu Ser Ser Asn Le - #u Ile Asp Leu Asn Ser 
# 255 
- Pro Pro Pro Asp Gln Thr Thr Asn Lys Leu Gl - #y His Phe Asp Pro Leu 
# 270 
- Gln Ala Thr Thr Ala Ala Asn Ser Val Leu Pr - #o Ser Val Arg Asp Val 
# 285 
- Phe Asp Gly Pro Gln Cys Pro Leu Thr Ala Gl - #u Val Trp Phe His Ala 
# 300 
- Gly Ile Ser Arg Pro Ile Ser Glu Arg Leu Le - #u Gln Gln Asp Gly Asp 
305 3 - #10 3 - #15 3 - 
#20 
- Glu Leu Val Arg Glu Ser Gln Gly Lys Arg Gl - #y Gln Tyr Val Leu Thr 
# 335 
- Gly Leu Glu Gly Lys Thr Pro Lys His Leu Le - #u Leu Ile Asp Pro Glu 
# 350 
- Gly Val Val Arg Thr Lys Asp Arg Ile Phe As - #p Ser Ile Ser His Leu 
# 365 
- Ile Asn Tyr His Trp Ala His Ala Leu Pro Il - #e Ile Ser Glu Asp Ser 
# 380 
- Glu Leu Val Leu Arg Asn Pro Val Arg Arg Pr - #o Gln Gln Asp Gln Ala 
385 3 - #90 3 - #95 4 - 
#00 
- Ala Ser Pro Ile Thr Ser Ala Ser Ser 
405 
- (2) INFORMATION FOR SEQ ID NO:9: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 4 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 1 
#/note= "phosphotyrosine site"N: 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 2 
#/note= "can be substituted with a 
#amino acid" hydrophobic 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 4 
#/note= "can be substituted with a 
#Met" Leu or 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:9: 
- Tyr Glu Xaa Ile 
- (2) INFORMATION FOR SEQ ID NO:10: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 6 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 1 
#/note= "can be substituted with 
Ile" 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 6 
#/note= "phosphotyrosine site"N: 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:10: 
- Leu Xaa Asn Pro Xaa Tyr 
1 5 
- (2) INFORMATION FOR SEQ ID NO:11: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 4 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 1 
#/note= "phosphotyrosine site"N: 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 2 
#/note= "can be substituted with a 
#amino acid" hydrophobic 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 3 
#/note= "can be hydrophobic/Met/Tyr 
or hydrop - #hobic/Met/Ile" 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 4 
#/note= "can be Ile/Leu/Met orN: 
Phe/Tyr" 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:11: 
- Tyr Glu Xaa Xaa 
1 
- (2) INFORMATION FOR SEQ ID NO:12: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 4 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 4 
#/note= "phosphotyrosine site"N: 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:12: 
- Asn Pro Xaa Tyr 
1 
- (2) INFORMATION FOR SEQ ID NO:13: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 4 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:13: 
- Tyr Val Asn Thr 
1 
- (2) INFORMATION FOR SEQ ID NO:14: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 4 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 1 
#/note= "phosphotyrosine site"N: 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 2 
#/note= "can be substituted with a 
#amino acid" hydrophobic 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 3 
#/note= "can be hydrophobic/Met/Tyr" 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 4 
#/note= "can be substituted with a 
#Met" Leu or 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:14: 
- Tyr Glu Xaa Ile 
1 
- (2) INFORMATION FOR SEQ ID NO:15: 
- (i) SEQUENCE CHARACTERISTICS: 
#pairs (A) LENGTH: 21 base 
(B) TYPE: nucleic acid 
(C) STRANDEDNESS: single 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: other nucleic acid 
#= "primer"A) DESCRIPTION: /desc 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:15: 
#21 GGAC A 
- (2) INFORMATION FOR SEQ ID NO:16: 
- (i) SEQUENCE CHARACTERISTICS: 
#pairs (A) LENGTH: 20 base 
(B) TYPE: nucleic acid 
(C) STRANDEDNESS: single 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: other nucleic acid 
#= "primer"A) DESCRIPTION: /desc 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:16: 
# 20 CTCT 
- (2) INFORMATION FOR SEQ ID NO:17: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 11 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:17: 
- Tyr Tyr Asn Xaa Xaa Pro Xaa Lys Xaa Pro Pr - #o 
# 10 
- (2) INFORMATION FOR SEQ ID NO:18: 
- (i) SEQUENCE CHARACTERISTICS: 
#acids (A) LENGTH: 14 amino 
(B) TYPE: amino acid 
(C) STRANDEDNESS: 
(D) TOPOLOGY: unknown 
- (ii) MOLECULE TYPE: peptide 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 1 
#/note= "can be substituted with an 
Arg" 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 7 
#/note= "can be substituted with a 
Lys" 
- (ix) FEATURE: 
(A) NAME/KEY: Modified-sit - #e 
(B) LOCATION: 14 
#/note= "can be substituted with an 
Arg" 
- (xi) SEQUENCE DESCRIPTION: SEQ ID NO:18: 
- Lys Asp Leu Phe Asp Met Arg Pro Phe Glu As - #p Ala Leu Lys 
# 10 
__________________________________________________________________________