PharMolix/UniProtQA huggingface dataset:
Protein: TSP50_MOUSE
Sequence: MEPWCGAEVRGQGPQGPRVPGASRSRSRALLLLLLLLLLLLPRRPAGERIRPRRPPRHAHPRPPLTRWRPSTGYLAAGASPGTLSTTVPTGPGVSCGSRGICPSGRLRLPRQAQTNQTTTAPPNSQTMAPLKTVGTLGMMDTTGSVLKTVHSSNLPFCGSSHEPDPTLRDPEAMTRRWPWMVSVQANGSHICAGILIASQWVLTVAHCLSQNHVNYIVRAGSPWINQTAGTSSDVPVHRVIINHGYQPRRYWSWVGRAHDIGLLKLKWGLKYSKYVWPICLPGLDYVVEDSSLCTVTGWGYPRANGIWPQFQSLQEKEVSILNSKKCDHFYHKFSRISSLVRIINPQMICASDNNREEFCYEITGEPLVCSSDGTWYLVGMMSWGPGCKKSEAPPIFLQVSYYRPWIWDRLSGEPLALPAPSRTLLLAFLLLLILLGTL
What is the function of this protein?
May be involved in proteolysis through its threonine endopeptidase activity.
What are the official names of this protein?
Probable threonine protease PRSS50, Serine protease 50, Testis-specific protease-like protein 50.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1 family.
What are the subcellular locations of this protein?
Membrane; Single-pass type I membrane protein.
Protein: CCG3_MOUSE
Sequence: MRMCDRGIQMLITTVGAFAAFSLMTIAVGTDYWLYSRGVCRTKSTSDNETSRKNEEVMTHSGLWRTCCLEGAFRGVCKKIDHFPEDADYEQDTAEYLLRAVRASSVFPILSVTLLFFGGLCVAASEFHRSRHSVILSAGIFFVSAGLSNIIGIIVYISANAGDPGQRDSKKSYSYGWSFYFGAFSFIIAEIVGVVAVHIYIEKHQQLRARSHSELLKKSTFARLPPYRYRFRRRSSSRSTEPRSRDLSPISKGFHTIPSTDISMFTLSRDPSKLTMGTLLNSDRDHAFLQFHNSTPKEFKESLHNNPANRRTTPV
What is the function of this protein?
Regulates the trafficking to the somatodendritic compartment and gating properties of AMPA-selective glutamate receptors (AMPARs) (PubMed:18341993).  Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization.  Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits.  Thought to stabilize the calcium channel in an inactivated (closed) state (By similarity).
What are the official names of this protein?
Voltage-dependent calcium channel gamma-3 subunit, Neuronal voltage-gated calcium channel gamma-3 subunit, Transmembrane AMPAR regulatory protein gamma-3, TARP gamma-3.
What is the protein family that this protein belongs to?
Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein. Note=Displays a somatodendritic localization and is excluded from axons in neurons.
Protein: CYB_LEPCO
Sequence: MTNIRKTHPLLKIVNHSLIDLPAPSNISAWWNFGSLLGLCLMIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYLHANGASMFFICLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDVLGFLM
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: RECX_VIBCH
Sequence: MSFDLATCRQSALQLLSRRDHSEYELYQKLALKGHPAEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQLKEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE
What is the function of this protein?
Modulates RecA activity.
What are the official names of this protein?
Regulatory protein RecX.
What is the protein family that this protein belongs to?
Belongs to the RecX family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATP6_RHIL3
Sequence: MSSDPTHQFLIQKIVPIEIGGIDFSFTNASLFMAASAAIAAGFLYFATSNRAIVPGRSQSVAEIFYEFIAKMLTEGAGKQGMQFFPLVFSLFMFVLTANLLGMFPYFFTVTSQIIVTAALAILVIGTVVVYGFYKHGFKFLNVFVPSGVPGILLPLVVTIEIISFLSRPISLSVRLFANMLAGHITLKVFAGFVASLGALGAVGVGGAVLPLIMTVALTGLEFLVAFLQAYVFAVLTCMYLNDAIHPGGH
What is the function of this protein?
Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
What are the official names of this protein?
ATP synthase subunit a, ATP synthase F0 sector subunit a, F-ATPase subunit 6.
What is the protein family that this protein belongs to?
Belongs to the ATPase A chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: CCD78_HUMAN
Sequence: MEHAATTGPRPGPPSRRVENVVLRAKDWLPGAPGGTAVWATSLEAEVPPDLALNKEQQLQISKELVDIQITTHHLHEQHEAEIFQLKSEILRLESRVLELELRGDGTSQGCAVPVESDPRHPRAAAQELRHKAQVPGHSDDHRFQVQPKNTMNPENEQHRLGSGLQGEVKWALEHQEARQQALVTRVATLGRQLQGAREEARAAGQRLATQAVVLCSCQGQLRQAEAENARLQLQLKKLKDEYVLRLQHCAWQAVEHADGAGQAPATTALRTFLEATLEDIRAAHRSREQQLARAARSYHKRLVDLSRRHEELLVAYRAPGNPQAIFDIASLDLEPLPVPLVTDFSHREDQHGGPGALLSSPKKRPGGASQGGTSEPQGLDAASWAQIHQKLRDFSRSTQSWNGSGHSCWSGPRWLKSNFLSYRSTWTSTWAGTSTKS
What is the function of this protein?
Component of the deuterosome, a structure that promotes de novo centriole amplification in multiciliated cells that can generate more than 100 centrioles.  Deuterosome-mediated centriole amplification occurs in terminally differentiated multiciliated cells (G1/0) and not in S phase.  Essential for centriole amplification and is required for CEP152 localization to the deuterosome.
What are the official names of this protein?
Coiled-coil domain-containing protein 78, hsCCDC78.
What is the protein family that this protein belongs to?
Belongs to the CCDC78 family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole. Cytoplasm, perinuclear region. Cell membrane, sarcolemma. Sarcoplasmic reticulum. Note=Localizes to centrioles and deuterosome. Found primarily in the perinuclear region as well as along the sarcolemmal membrane and in reticular pattern within the sarcoplasm.
Protein: TGB1_WCMVO
Sequence: MDHIHHLLSSHGFTRTRLAKSKPIVVHAIAGSGKSTVIRKILSDLPNARAYTLGKPDPYSLSNPTIKAFAQFKRGTLDILDEYGQLPFADLDSSFEFIFTDPYQAPTDNLFEPHYTLEITYRFGPNTCNLLNQAFQSNITSLVTQDNISFGSPYLVDPVGTILAFQPDTYLILCLHQAPFFKVSEVIGYQWPTVTLYLACKISEIPEEERHLLFIGLTRHTESLLILGPDAFDSSP
What is the function of this protein?
Transports viral genome to neighboring plant cells directly through plasmosdesmata, without any budding.  The movement protein allows efficient cell to cell propagation, by bypassing the host cell wall barrier.  Increases plasmodesma size exclusion limit.  Acts as a suppressor of RNA-mediated gene silencing, also known as post-transcriptional gene silencing (PTGS), a mechanism of plant viral defense that limits the accumulation of viral RNAs (By similarity).
What are the official names of this protein?
Movement and silencing protein TGBp1, 25 kDa protein, Silencing suppressor P25, Triple gene block 1 protein, TGBp1.
What is the protein family that this protein belongs to?
Belongs to the Tymovirales TGBp1 protein family.
What are the subcellular locations of this protein?
Host cytoplasm.
Protein: PHOT2_ORYSJ
Sequence: MAGSSSSKEIVDAVEKWMAFPTSGGGGATAGLEIVAEDAPSGSSGAHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVGRASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNCRFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFIGMQVEVSKYTEGLSDKRMRPNELPVSLIRYDERQKDKAMSSMTEVVQTVKQPRGARAPADAALLTPPKMSDADKMAAMSPVVAPGTPSGGGGGAGSFKSPLWDLKKEESRLSRLASGRKSGRSSLMGFKIGKRSSVGSREAPAVVEEPAPAPPPAPEVVERTDSWERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQGTVDKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSENTEIQSAKLVKATAENVDDAVRELPDANLRPEDLWAIHSMRVSPKPHKRNNPSWIAIEKATNLGEKIGLKHFKPVKPLGCGDTGSVHLVELQGSGELFAMKAMDKSVMLNRNKVHRACIEREIYALLDHPFLPTLYTSFQTPTHVCLITDFCPGGELFAVLDRQPMKIFREECARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQADGHIVLTDFDLSFLTTSKPHVIKNSTSLKRRRSQEFLPPTFVSEPSTPSNSFVGTEEYIAPEVITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRKKTFYNILHKDLTFPSSIPVSLAAKQLIHGLLQRDPSNRIGSNAGANDIKQHSFFQDINWPLIRCMSPPELDVPLKLIGKETQPKAKPDEDVPLNLDTF
What is the function of this protein?
Protein kinase that acts as a blue light photoreceptor in a signal-transduction pathway for phototropic responses.  Regulates a wide range of physiological activities in plants that maximize the efficiency of photosynthesis, such as chloroplast relocations, stomata opening, and leaf expansion (By similarity).
What are the official names of this protein?
Phototropin-2, Non-phototropic hypocotyl protein 1B, OsNPH1B.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
Protein: VATB_STRP4
Sequence: MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMEELRKTGAIDRSVLFMNLANDPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHELYNQGYRPPINVLPSLSRLKDKGSGEGKTRGDHAPTMNQLFAAYAQGKKVEELAVVLGESALSDVDKLYVRFTKRFEEEYINQGFYKNRNIEDTLNLGWELLSILPRTELKRIKDDLLDKYLPLVEV
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The V-type beta chain is a regulatory subunit.
What are the official names of this protein?
V-type ATP synthase beta chain, V-ATPase subunit B.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
Protein: ARYA_PSEPU
Sequence: TRRTAFLFDELSLWHSASQYALILPVGG
What is the function of this protein?
Shows a strict specificity for N-acetyl arylalkylamines but not acetanilide derivatives.
What are the official names of this protein?
Arylalkyl acylamidase.
Protein: CFA52_HUMAN
Sequence: MDNKISPEAQVAELELDAVIGFNGHVPTGLKCHPDQEHMIYPLGCTVLIQAINTKEQNFLQGHGNNVSCLAISRSGEYIASGQVTFMGFKADIILWDYKNRELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATNVIFSRCRDEMFMTAGNGTIRVWELDLPNRKIWPTECQTGQLKRIVMSIGVDDDDSFFYLGTTTGDILKMNPRTKLLTDVGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLVFCKSPGYKPIKKIQLQGGITSITLRGEGHQFLVGTEESHIYRVSFTDFKETLIATCHFDAVEDIVFPFGTAELFATCAKKDIRVWHTSSNRELLRITVPNMTCHGIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINNAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKRNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYPYTS
What is the function of this protein?
Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating (By similarity).  Important for proper ciliary and flagellar beating.  May act in cooperation with CFAP45 and axonemal dynein subunit DNAH11 (PubMed:33139725).  May play a role in cell growth and/or survival (PubMed:15967112).
What are the official names of this protein?
Cilia- and flagella-associated protein 52, WD repeat-containing protein 16, WD40-repeat protein up-regulated in HCC.
What is the protein family that this protein belongs to?
Belongs to the CFAP52 family.
What are the subcellular locations of this protein?
Cytoplasm. Cell projection, cilium, flagellum. Cytoplasm, cytoskeleton, cilium axoneme. Note=Located in the proximal region of respiratory cilia.
Protein: GPTC4_XENTR
Sequence: MSASSGEKSQGRRFAEQQMHKHGWTEGKGLGRRENGISEAIKVKVKCDHAGVGHNSAEQFTFHWWDHVFNKTASSISVEADQDGVKVNRTKDDDAPVTNKKPRKALSNRNMLYGRFVKSATLLPGGEQAVKEPSSSESSDSSGDEDEKLDLSSATKMTDEDLRKVCGGRTAHKGARHGLTMSAKLSRLEEQEREFLAKYGNKQQKDKVKAVTPEITEDLLGKNRQQNDSGECPETNNSHKKKKKKRERVDSEREEEEEEESQENRHEEEQVPLSEEEIKSSKKKKSKKKHREQSASPQEEQVTESTDFCIKPKKKKKKKNKSE
What are the official names of this protein?
G patch domain-containing protein 4.
Protein: SYR_BART1
Sequence: MNIFKNFEKKIKKSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGLSPRALADKIIELLKNDISIENIDVAGPGFINIKLTKLFWQDAVKYMLELGLSYGRIPMGQGKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFAGYNITKEYYINDAGQQIEVLAHSVLLRYREALGQKINEIPEGLYPGEYLIPLGQALAQEFGDQLLTMDRDEALSIVKERAIHTMMSMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNIEDWEPSEQTLFRSTNVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGADHAGYVKRLEAMAKAISGNKAKLSVFLCQLVKLFRNGQPVRMSKRAGSFVTLRDVVEEVGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSVFRQAQEVLHIESFSNDILITYLHRLIDDNEILLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASCFHTHWNKGSENLNLRFIQPHDKELSFARLGLIQAVINILSSGLSIIGVEAPIEMR
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CDS1_CONIM
Sequence: MPKLEMMLLVLLILPLCYIDAVGPPPPWNMEDEIIEHWQKLHCHEISDLTPWILCSPEPLCGGKGCCAQEVCDCSGPVCTCPPCL
What is the function of this protein?
Probable neurotoxin.
What are the official names of this protein?
Conotoxin Im28.1, Conopeptide im004.
What is the protein family that this protein belongs to?
Belongs to the conotoxin D superfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: PURO_HALMA
Sequence: MYVGRFVVVSPEVGAYRVSSRSFPNRQAVQRDGTVTVEPTPDAPETDNPYISYNGVRVTERGAVVGNGSHVDPIAEKLELGYPARDAIAEPLLSLDFEKDDYDTPRVAGIVGVDAADPTTNADGPGAVIGTVRRDALLVEEVTEPTLVATYEENSPTAFDLAATDASDVAREVYDHEYEHAVCSAGVAGSAGEFDVAVYNGE
What is the function of this protein?
Catalyzes the cyclization of 5-formylamidoimidazole-4-carboxamide ribonucleotide to IMP.
What are the official names of this protein?
IMP cyclohydrolase, IMP synthase, Inosinicase.
What is the protein family that this protein belongs to?
Belongs to the archaeal IMP cyclohydrolase family.
Protein: SUFE_ECO57
Sequence: MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDVVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS
What is the function of this protein?
Participates in cysteine desulfuration mediated by SufS.  Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L-alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules.  Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process.
What are the official names of this protein?
Cysteine desulfuration protein SufE.
What is the protein family that this protein belongs to?
Belongs to the SufE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GAG_HV193
Sequence: MGARASVLSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFALDPGLLETSEGCRKIIGQLQPSLQTGSEELKSLYNTIAVLYYVHQKVEVKDTKEALEKLEEEQNKGRQKTQQATAEKGVSQNYPIVQNLQGQMVHQSLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPTQAGPIPPGQIREPRGSDIAGTTSTLQEQIQWMTGNPPVPVGEMYKRWIILGLNKIVRMYSPVGILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTDTLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPSHKARVLAEAMSQATNTAIMMQKSNFKGQRRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGREGHQMKDCTERQANFLGKIWPSNKGRPGNFIQNRPEPSAPPAESFRFGEETTPSPKQEQKDEGLYPPLASLKSLFGNDP
What is the function of this protein?
Plays a role in budding of the assembled particle by interacting with the host class E VPS proteins TSG101 and PDCD6IP/AIP1.
What are the official names of this protein?
Gag polyprotein, Pr55Gag.
What is the protein family that this protein belongs to?
Belongs to the primate lentivirus group gag polyprotein family.
What are the subcellular locations of this protein?
[Gag polyprotein]: Host cell membrane; Lipid-anchor. Host endosome, host multivesicular body. Note=These locations are probably linked to virus assembly sites. The main location is the cell membrane, but under some circumstances, late endosomal compartments can serve as productive sites for virion assembly. SUBCELLULAR LOCATION: [Matrix protein p17]: Virion membrane; Lipid-anchor. Host nucleus. Host cytoplasm. SUBCELLULAR LOCATION: [Capsid protein p24]: Virion. SUBCELLULAR LOCATION: [Nucleocapsid protein p7]: Virion.
Protein: NCPP_ECO57
Sequence: MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASIAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTTQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY
What is the function of this protein?
Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives.  Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.
What are the official names of this protein?
Inosine/xanthosine triphosphatase, ITPase/XTPase, Non-canonical purine NTP phosphatase, Non-standard purine NTP phosphatase, Nucleoside-triphosphate phosphatase, NTPase.
What is the protein family that this protein belongs to?
Belongs to the YjjX NTPase family.
Protein: SNRPA_BOVIN
Sequence: MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPAAKKAVQGGAAAPVVGTVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQLPPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
What is the function of this protein?
Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome.  U1 snRNP is the first snRNP to interact with pre-mRNA.  This interaction is required for the subsequent binding of U2 snRNP and the U4/U6/U5 tri-snRNP.  SNRPA binds stem loop II of U1 snRNA.  In a snRNP-free form (SF-A) may be involved in coupled pre-mRNA splicing and polyadenylation process.  May bind preferentially to the 5'-UGCAC-3' motif on RNAs (By similarity).
What are the official names of this protein?
U1 small nuclear ribonucleoprotein A, U1 snRNP A, U1-A, U1A.
What is the protein family that this protein belongs to?
Belongs to the RRM U1 A/B'' family.
What are the subcellular locations of this protein?
Nucleus.
Protein: FMT_CHLPM
Sequence: MHVTPLRLIFMGTPDFAVPSLQAIVDASLPVEVVQVVTAPDRPRRKKNAEAEPTPVKSLALQLGLPVLEVEDVKDPGFAEAVRRLQPDVIVVAAFRILPPAVYGAARLGAFNLHASLLPAYRGAAPINHALIEGERESGVTTFFLQRQVDTGNIILKKSTPINSMENATQLAERLSQIGAEAVVETLRLIAEGTVEVSAQDESLVSKAPKLTRENTRIDWNQSAEDLHNFIRGLAMRPTAWTTLGGKNFKIFQSAPAPAVPATSCGKPGTMLIEGGCLYASGTDGWIEILSLQLEGKRPMDAGEFLRGFRAESGVLFGS
What is the function of this protein?
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet).  The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.
What are the official names of this protein?
Methionyl-tRNA formyltransferase.
What is the protein family that this protein belongs to?
Belongs to the Fmt family.
Protein: LFTR_CITK8
Sequence: MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAILQPETLHISRSMKRFHKRSPYRVTLNYAFGQVIEGCANDRDEGTWITRDVVEAYHRLHELGHAHSIEVWRHNALVGGMYGVSQGTLFCGESMFSRQENASKTALLVFCAEFIRQGGKLIDCQVLNSHTASLGAVEIPRRQYLEHLGSLRQQRLPGHFWVPRTLFSPQA
What is the function of this protein?
Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
What are the official names of this protein?
Leucyl/phenylalanyl-tRNA--protein transferase, L/F-transferase, Leucyltransferase, Phenyalanyltransferase.
What is the protein family that this protein belongs to?
Belongs to the L/F-transferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MGSA_CLOPS
Sequence: MKIALIAHDKKKEEMIELAKDFEDKLSKHILVATGTTGLKIMQNTSLEVKRCKSGPLGGDQEIGAMVANHDVDMVIFLRDPLTAQPHEPDISALLRLCDVYKVPLATNTESAKLIMADI
What is the function of this protein?
Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
What are the official names of this protein?
Methylglyoxal synthase, MGS.
What is the protein family that this protein belongs to?
Belongs to the methylglyoxal synthase family.
Protein: CAH_METJA
Sequence: MISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKGYPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSETLESYK
What is the function of this protein?
Probably reversibly hydrates carbon dioxide.
What are the official names of this protein?
Probable carbonic anhydrase, CA.
What is the protein family that this protein belongs to?
Belongs to the gamma-class carbonic anhydrase family.
Protein: NUSB_MYCLE
Sequence: MSNPVKGRHQARKRAVDLLFEAEARDLSPLEIIEVRSALAKSKLDVAPLHPYTVVVAQGVSEHTARIDELIISHLQGWKLDRLPAVDRAILRVSIWELLYADDVPEPVAVDEAVELAKELSTDDSPGFVNGLLGKVMLVTPQIRAAAQAVQQAVRMAAGTSEDHVPQREPAAGQLGQDDSNGGQVAAVCR
What is the function of this protein?
Involved in transcription antitermination.  Required for transcription of ribosomal RNA (rRNA) genes.  Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
What are the official names of this protein?
Transcription antitermination protein NusB, Antitermination factor NusB.
What is the protein family that this protein belongs to?
Belongs to the NusB family.
Protein: IF2_STRS2
Sequence: MSKKRLNEIARELGVSSKEVVAKAQELGFEVKSHASSVDEASAKRLAESFGGQKSEATKVAAKVSKPEKVDETPKVETAKVEKAKETQPVVKEEVAASAVQSASHRPQSRNFKAEREARAKEQAAKRAQNQGKGGQAKSDQDRRDNRQLGQGRSNNERNDRRDNRRDQRPEERKDNRFGDRRDNRDNRRQDNRSGRLARFEQREAAKPAGPKIDFKARAAALKAEQNAEYARTSEERFRQAQEAKKQPKKPKEIKFEEPVVESKPFVKPALVASVPEQVAETTVDTRRKKQARPDKKRDFNSDEEDGPRKQQRNRNSQNQVRNQRTSNWNNNKKNKKGKANQPAKPVTERKFHELPTEFEYTAGMTVAEIAKRIKREPAEIVKKLFLMGVMATQNQSLDGDTIELLMVDYGIEAKEKVEVDNADIERFFVEEGYLNEEEMTERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGASVTDLTILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVISTAWGGESEFVEISAKFNQNIDELLETVLLVAEIQELKADPTVRAIGTVIEAHLDKGKGAVATLLVQQGTLNVQDPIVVGNTFGRVRAMTNDLGRRVKTAGPSTPVSITGLNETPMAGDHFAVYEDEKSARAAGEERAKRALLKQRQATQRVSLENLFDTLKAGEVKSVNVIIKADVQGSVEALASSLQKIEVEGVRVNIVHSAVGAINESDITLAEASNALVIGFNVRPTAEARSQAEADDVEVRLHSIIYKVIEEMEDAMKGMLDPEYEEKIIGEAIIRETFKVSKVGTIGGFMVVRGKVTRDSSVRVIRDGVVVFDGKLASLKRYKDDVKEVGNAQEGGLMIENYNDLKVDDTIEAYIMEEIKK
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
What are the official names of this protein?
Translation initiation factor IF-2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MNTP_BACP2
Sequence: MYELAGELLTLSIMAFALGMDAFSVGLGMGMIQLRFRQIIYIGLVIGIFHMFMPLFGMLTGQLLSGWLGLLATYIGGALLLVLGLQMIIASIRKEDKPFIAPVGAGLVLFATSVSLDSFSVGLSLGIYGSHVWMTILLFGFFSMILTWLGLLLGKQVRSWVGSYSGALGGIILLAFGIKLLFPL
What is the function of this protein?
Probably functions as a manganese efflux pump.
What are the official names of this protein?
Putative manganese efflux pump MntP.
What is the protein family that this protein belongs to?
Belongs to the MntP (TC 9.B.29) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RS13_LEUCK
Sequence: MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLSADQEDAIRATVDKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAGKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.