PharMolix/UniProtQA huggingface dataset:
Protein: HSDR_STAAN
Sequence: MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQRLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMAMRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRHIINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKIILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQIDLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV
What is the function of this protein?
The restriction (R) subunit of a type I restriction enzyme that may recognize 5'-AGGN(5)GAT-3' and cleaves a random distance away.  Subunit R is required for both nuclease and ATPase activities, but not for modification.  After locating a non-methylated recognition site, the enzyme complex serves as a molecular motor that translocates DNA in an ATP-dependent manner until a collision occurs that triggers cleavage.
What are the official names of this protein?
Type I restriction enzyme SauN315I endonuclease subunit, R protein, SauN315I, Type-1 restriction enzyme R protein.
What is the protein family that this protein belongs to?
Belongs to the HsdR family.
Protein: LEPA_SALG2
Sequence: MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDFKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVTDVLERLVRDIPPPQGDPDGPLQALIIDSWFDNYLGVVSLVRIKNGTMRKGDKIKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDILGAPVGDTLTSARNPAEKALPGFKKVKPQVYAGLFPVSSDDYESFRDALGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTAKETIYVDSPSKLPPLNNIYELREPIAECHMLLPQAYLGNVITLCIEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINNERVDALALITHRDNSQSRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQKQKEGKKRMKRIGNVELPQEAFLAILHVGKDNR
What is the function of this protein?
Required for accurate and efficient protein synthesis under certain stress conditions.  May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.  Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly.  Binds to ribosomes in a GTP-dependent manner.
What are the official names of this protein?
Elongation factor 4, EF-4, Ribosomal back-translocase LepA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: GPH_RHORT
Sequence: MPKAVIFDLDGTLVHSLPGLTDALNKTLAEDDLAPLDEAAVKRMVGEGAGLLVARAFAAYGLGRADDADDTATQARLARFLAHYAPDPLAGASVYPGALALLGALAARGIRLGVCTNKPEGPARALLEGLGLADPIMDVVGGDTLAQRKPDPAPLRALLDSLGVEADQALMVGDSPTDVATAKAAGVPVVVMSYGYSREPVASLGALAVFDDFASLGDWLGFPQPGGDRLGATPALSENPA
What is the function of this protein?
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate.  Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress.
What are the official names of this protein?
Phosphoglycolate phosphatase, PGP, PGPase.
What is the protein family that this protein belongs to?
Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
Protein: YCF2_NYMAL
Sequence: MKRHQFKSCIFELREILREIKNSRYFLDSWTKFDSVVSFTHIFFHQERFVKLLGPQTWSVLLSRDSQGSTSNRYFTIKGVVLLVVAVLIYRINNRNMVERKNLYLMGLLPIPMNSIGPRNDTLEESFWSPNINRLIVSLLYLPKGKKISESCFMDPKESTWVLPITQKCIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVSYMDDPIRKDHGWELFDRVSPRKKRNIINLNSGQLFEILAKHLICYLMSAFREKRPIEVEGFLKQQGAEATIPSNDIEHVSHLFSRNKWDISLQNCAQFHMWQFHQDLFVSWGKNQHESDFLRNVSRENLIWLDNMWLVNKDRFFSKVRNVSSNIQYDSTRSIFVQVTDSSQLKGSSDQSRENFDSISNEDSEYHTLINQTEIQQLKERLILWDPSSLQTERTEIESDRFPKYPSGYSSMSRLFTEREKQMNNHLFPEKIEEFLGNPTRSIRSFFSDRWSELHLVSNATERFTRDQKLLKKQQDVFSFVPSRRSEKKEMVDIFKIITYLQNTVSIHPISSDRGCDMVPKDEPDMDSSNKISFLNKNPFCDLFHLFHDRNKGRYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKKFLNEVFNSRDESKKNSLLVLPHIFYEENESFYRRIRKKWVRISCRNGLEDPKPKIVVFASNNIMEAVNQYRLIRNLIQIQYSTYGYIRNLSNRFFLMNRSDRNFEYGIQRDQIGNDTLNHITIMKYMINQHLLNVKKSQKKWFDPLISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFVSEQKNRFQVVFDRLRINQHSIDWSKVIDKQDLSKSLHFFLSKSLLFLSKSLTFFFVSIGNIPIHRSEIHIYELKGPNDQLCNQLLESIGVQIVHLNKLKPFLLDDHDTSQRSKFLINGGTISAFLFNKIPKWMIDSLHTRNNRRKFFDNTDSYFSMISHDRDNWLNPVKPFHRSSLISSFYKANLLRFLNNPHHFCFYSNKRFPFYAEKTRIDNYDLTYGQFLHISFIRNKIFSLCVGKKKHVFLERDTISPIESQVSDIFIPNDFPQSGDETYNLYKSQPLSTYCQPLSDMNLSDSEGKNLHQYLSFNSNMGLIHTPCSEKDLPSAKKRNLCLKKCVEKRQMYRAFQRDSAFSNLSKWNLFQTYMPWFLTSAGCKYINFILLDTFSDPLPILSSSHQFVSFFYDIMHGSDISWSILQIPLWAILPRWNLISEISSKCLQNILLPEEMIHRNNESPVPLKWTHLRSPNAREFLYSILFLLLVAGYLVRTHLLFISRVSSELQTELEKIKSLMIPSYMIELRKLLDRYPPPELNSFWLKNLFLVALEQLGDSLEEIRSSASGGNMLLSGGPTYGVKSIRSKKKDLNINLIDIIYLISIIPNPINSITFSRNTRHLSRTSKEIYSLIRKNVNSDWIDDQIESWVANSDLIDDEEREFLVQFSTLTTEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGSIYLRYLVDIQKRYLMNYEFNRSCLAERRIFLAHYQTITYSQTPCGANSSHFPSHGKPFSLRLALPPSRGILVIGFIGTGRSYFVKYRVTNSYVPFITVFPNKFLDDNKGYLIDDIDIDDRDDIDIDDRDDDDLDTELLTMPNVLTMYMTPKIDQFEITLPLELAKAMSPCIIWIPNIHDLYVNESNYLSLGLLVNHLPRDCERCSTRNILVIASTHIPQKVDPALIAPNKSNTCIKIRRLLIPQQRKHFFILSYTRGFRLEKKMSHTNGFGSITMGSNARDLVALTNEVLSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQYHEILFYQIGRAVAQNVLLSNCSIDPISIYMKKKSCKEGDSYLSKWYFELGTSMKKLTILLYLLSCSAGSVAQDLWSPPGPDEQNWITSYGFVENDSDLVHGLLESALVGYSRTECSQFDNDRVTLLLRSEPRNQLDMMQNGSCSIVDQRFLYEKYESGFEEGEGEGTLDLQQIEEDEDLFNHIVWAPRLWRPHGNLFDCIERPKKLGFPYWVRSFRDKRIIYHKEDKLQENDSEFLRSGTVQYQTRDRSSKEQGFFRISQFIWDPADQFFFLFKDQPFVSVFSRRESFADEEMSKGLITSQTNSPTSIYKRWLIKNTQEKHFELLIHRQRWLRTNTNSSLSNGSFRSNTLSESYQYLSNLFLSNNGTLLDQMTKTLLRKRWLFPDEMKHLIHAPGERFPIP
What is the function of this protein?
Probable ATPase of unknown function.  Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis.
What are the official names of this protein?
Protein Ycf2.
What is the protein family that this protein belongs to?
Belongs to the Ycf2 family.
What are the subcellular locations of this protein?
Plastid, chloroplast stroma.
Protein: RS8_ENTFA
Sequence: MVMTDPIADFLTRIRNANMVKHETLEVPASKIKRDIAEILKREGFIRDVEYIEDDKQGVIRVFLKYGKNEERVITNLKRISKPGLRAYVKADEVPKVLNGLGIAIISTSEGVITDKEARAKNIGGEVIAYVW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.
Protein: DNAK_SALPC
Sequence: MGKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLITKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALNALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQAGSADASANNAKDDDVVDAEFEEVKDKK
What is the function of this protein?
Acts as a chaperone.
What are the official names of this protein?
Chaperone protein DnaK, HSP70, Heat shock 70 kDa protein, Heat shock protein 70.
What is the protein family that this protein belongs to?
Belongs to the heat shock protein 70 family.
Protein: UPP_MARN8
Sequence: MPIHEVKHPLIRHKLGLMRRADISTKNFRELAQEVGALLTYEATKDFNLQEKTIEGWAGPVSVEQIHGKKVTIVPILRAGLGMLDGVLSLIPVARVSVVGQIRNEDTLEAETYLEKLVGELDQRMALIIDPMLATGGSMISTIDLLKKAGSTEIRALVLVAAPEGVEKVLEKHPDVSIYTASVDERLNEKGYILPGLGDAGDKIFGTKQKDV
What is the function of this protein?
Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.
What are the official names of this protein?
Uracil phosphoribosyltransferase, UMP pyrophosphorylase, UPRTase.
What is the protein family that this protein belongs to?
Belongs to the UPRTase family.
Protein: KDSB_CITK8
Sequence: MSFVVIIPARFSSTRLPGKPLLDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAAPIHGAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKEVPGTGVDTAEDLERVRAEMR
What is the function of this protein?
Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
What are the official names of this protein?
3-deoxy-manno-octulosonate cytidylyltransferase, CMP-2-keto-3-deoxyoctulosonic acid synthase, CKS, CMP-KDO synthase.
What is the protein family that this protein belongs to?
Belongs to the KdsB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: QOX4_STAEQ
Sequence: MNTIVKHTVGFIASIVLTLLAVFVTLYTNMTFHAKVTIIFGFAFIQAALQLLMFMHLTEGKDGRLQSFKVIFAIIITLVTVIGTYWVMQGGHSSHL
What is the function of this protein?
Catalyzes quinol oxidation with the concomitant reduction of oxygen to water.
What are the official names of this protein?
Probable quinol oxidase subunit 4, Quinol oxidase polypeptide IV.
What is the protein family that this protein belongs to?
Belongs to the cytochrome c oxidase bacterial subunit 4 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: HIS8_YERPB
Sequence: MSQSNNVTDLARANIRALTPYMSARRLGGNGDVWLNANEYPLGTEYQLTTQTFNRYPECQPKHVIERYAAYAGLPPEQVLVSRGADEGIELLIRAFCEPGQDAILFCPPTYGMYAVSAETFGVERRTVPAQADWQLDLPAIANNLDQVKVIYVCSPNNPTGNLINPADLQAVLALAQGRAIVAIDEAYIEFCPQASVSNWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKVIAPYPLSTPVADIAAQALSPKGIEQMRQRVSEVRANRAWLQSALQDCACVEQVFTSESNYLLARFTASSSVFNALWDQGIILRDQNKQPGLANCLRITIGTRQECERVIAALAPLPGIDNSNNIDNQSKTHSQTSSIRKGTI
What are the official names of this protein?
Histidinol-phosphate aminotransferase, Imidazole acetol-phosphate transaminase.
What is the protein family that this protein belongs to?
Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
Protein: LDH_STRMU
Sequence: MTATKQHKKVILVGDGAVGSSYAFALVNQGIAQELGIIEIPQLFEKAVGDALDLSHALAFTSPKKIYAAKYEDCADADLVVITAGAPQKPGETRLDLVGKNLAINKSIVTQVIESGFNGIFLVAANPVDILTYATWKFSGFPAEKVIGSGTSLDTARFRQALAEKLDVDARSVHAYIMGEHGDSEFAVWSHANVAGVNLENYLQDVQNFNGEELIDLFEGVRDAAYTIINKKGATFYGIAVALARITKAILDDENAILPLSVFQDGQYGFNEVFIGQPAIVGAHGIVRPVNIPLNDAEKQKMQASAKELKAIIDEAFSKEEFAAAARN
What is the function of this protein?
Catalyzes the conversion of lactate to pyruvate.
What are the official names of this protein?
L-lactate dehydrogenase, L-LDH.
What is the protein family that this protein belongs to?
Belongs to the LDH/MDH superfamily. LDH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL36_PETMO
Sequence: MKVRASVKKRCEHCKIVKRGGKVWVVCSKNPKHKQRQG
What are the official names of this protein?
50S ribosomal protein L36.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL36 family.
Protein: RAPA_ACTSZ
Sequence: MVFAVGQRWISESENNLGLGIITEVNSRAVTIFFPAADETRIYATASAPLTRVVFNAGDMITHQQGWQAQVTDIMVNNLTALYLVRRTDNGEEIVLKEIDLAHQINFSQPQDRLFTAQIDRSDRFALRYHALRHQQAQFKSPLRGLRGIRAGLIPHQLHIAKEVGQRLHPRVLLADEVGLGKTIEAGMILQQQIFAGRADRVLIVVPESLQHQWLVEMLRRFNLHFSLFDEERAEDFAATDEQEECNPFDSENLIICSLDWLISRPKRRTQALQTQFDLLIVDEAHHLTWSPEAANPEYQLVESLTKQIPSVLLLTATPEQLGQESHFARLKLLDADRFYDYDAFVAEQRHYRPVADAVQTLLAENPLSAAEKNAISDLLEEQDLEPLFKALDSRNEEEKATVRQELIDSLIDRHGTSRVLFRNTRQGVKGFPRRIYRQINLPLPKQYINAVRVVGRLGKNPEDELFYPERLFQNMDQNAKWWDFDPRVEWLITFLKNHRAEKVLVICRQAQTAVQLEQALRAKEGIRCAVFHERLSIIERDRAAAYFADQENGAQVLLSSAIGSEGRNFQFACRLVLFNLPENPDLLEQCIGRLDRIGQRRDIRIYVPCFADSPQAVLADWFHQGLNAFEEICPMGMALFEKCGQNLQYFLQNPTESAGFEMFLKKTAELRLQLKAELENGRDRLLELNSNGGEAAQRLAEAIRVEDNDTELVNFTLNLFDIIGVEQEDSGEKSIVITPTGTMLVPDFPGLKEEGVTVTFDRELALAREELEFLTWDHPMLRNGIDLVVSGDIGKTAASLLVNNKLPTGTLLLELIYVVESQSPKGLQLNRFLPPTPIRLLLDGKGQDLAAQVGFNRLEKQLKPMAKNMASKMVKMVRPNIEKMLSMAEQLMRERAKTLIGDAQQQADFVLSHELNRLNGLKRVNKNIRQDEIDGLEKIRIRSLSELAKASWRLDCLRVIVSNRA
What is the function of this protein?
Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations.  Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA.  Does not activate transcription on linear DNA.  Probably not involved in DNA repair.
What are the official names of this protein?
RNA polymerase-associated protein RapA, ATP-dependent helicase HepA.
What is the protein family that this protein belongs to?
Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
Protein: SELS_OCIBA
Sequence: MSANCVSAAPTSPKNSDVEEIRKSATYHSSVWGNHFLSYTSDVTEITAAEKEQLEKLKEKVKNLLAQTPDESTGKMELIDAIQRLGVGYHFTTEIQESLRQIHEGQIRNDDDDVRVVALRFRLLRQGGYRAPCDVFEKFMDDGGNFKESLKKDVEGMLSLYEASYYGIDGEEIMDKALEFSSSHLESMLHNISTKTNKSLLRRLQEALDTPISKAAIRLGATKFISTYREDESHNEDILNFAKLDFNILQKMHQEEANYLTRWWEDLDLASKLDFARDRMVESYFWSLGVYFQPQYRTSRIYLTKIISIVAVIDDIYDVYGSFDDLRSFTDVIQSWKISNADELPPYMRICFEALLGIYEDMGDRIGAPYAIDTMKELVDTYMQEAEWCYTEYVPTVDEYMKVALVTGGYLMVATTFLTGINNITKKDFDWIRNRPRLLQVAEVLTRLMDDIAGHGTEKKTTAVSCYMKEYECSEMEASRELSKQVKKAWKDLNDEWMEPRSSSAEIIGCIVNMSRVLHIMYSTGDDGFSDSSTRTTQAVKTLLVDHPMN
What is the function of this protein?
Sesquiterpene synthase that catalyzes the formation of alpha- and beta-selinene from trans,trans-farnesyl diphosphate (FPP).  Produces also some nerolidol.
What are the official names of this protein?
Selinene synthase.
What is the protein family that this protein belongs to?
Belongs to the terpene synthase family.
Protein: RF1_DELAS
Sequence: MQDFLRQQLERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREADLAAAQDMLSDPDMADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIRAGTGGDESALFAGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGTDVYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSEREAKEAALRKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTIYKLLAVMEGDLGDVLDALQAAREAELLAELQVNN
What is the function of this protein?
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
What are the official names of this protein?
Peptide chain release factor 1, RF-1.
What is the protein family that this protein belongs to?
Belongs to the prokaryotic/mitochondrial release factor family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GREA_BRUAB
Sequence: MEKFPMTPRGFEKLKEELRWRQQSERPRIIEAIAEARAHGDLSENAEYHAAKEAQSLNEGRINELEDLVARAEVIDVSKLTGDRIKFGATVTMIDEDTEEEKIYQIVGDQEADVKEGRISISSPIARALIGKGEGDTIEVNAPGGSRSYEIIALKFV
What is the function of this protein?
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites.  The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes.  Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus.  GreA releases sequences of 2 to 3 nucleotides.
What are the official names of this protein?
Transcription elongation factor GreA, Transcript cleavage factor GreA.
What is the protein family that this protein belongs to?
Belongs to the GreA/GreB family.
Protein: ATPD_OLEA2
Sequence: MTGNIAARRYARALFAIGQKQGLAELDAFGSELSAVAKAVEESPALARLFRNPLFSIEEKRAVLAKLLQAAGAGQTVSNFCNLLADKGRLADLPDINAFYSLLLDAEKGIIRGELVTAIKLAKAKRDAVKEQLEKQAGQKIELNFSVDKDILGGVVLKVGDRVLDASLRAQLGILKDNIKRGE
What is the function of this protein?
This protein is part of the stalk that links CF(0) to CF(1).  It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.
What are the official names of this protein?
ATP synthase subunit delta, ATP synthase F(1) sector subunit delta, F-type ATPase subunit delta, F-ATPase subunit delta.
What is the protein family that this protein belongs to?
Belongs to the ATPase delta chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RIR2H_MYCGI
Sequence: MNRTRSDSLAAGGLNWDSLPLRLFAGGNAKFWDPADIDFSRDRADWESLSTMERDWATRLCAEFIAGEEAVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGITEDLQGYLDDLPAYRQMFYEELPASLDALATDPSPQAQVRASVTYNHVIEGMMALTGYYAWHRICVDRHILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFEDRMNELIPLALQNTDDAFALYDEIPFGLTIEEFQQYAADKGMRRFGTISSARGRPLAEIDVDYTPLHLEDSFADEDRKALAASA
What is the function of this protein?
Probable oxidase that might be involved in lipid metabolism.
What are the official names of this protein?
R2-like ligand binding oxidase, Ribonucleotide reductase R2 subunit homolog, Ribonucleotide reductase small subunit homolog.
What is the protein family that this protein belongs to?
Belongs to the ribonucleoside diphosphate reductase small chain family. R2-like ligand binding oxidase subfamily.
Protein: CMOB_PSEAB
Sequence: MIQHLALDALQRHLAGSPLYGWATSLPAQIAARIEEGHGDLARWWSAVQRLPQVPAPKVELAQRFALHSDHDAALQAQVKEALQGLIPWRKGPFDFFGVQVDTEWRSDWKWERVSPHVELRGKRVLDVGCGNGYYQWRMLGAGAESVVGVDPNWLFLCQFLAAKRYLPELPAWHLPLALEDLPEKLEGFDTVFSMGVLYHRRSPIDHLLALKDCLKRGGELVLETLVVEGDASTVLVPEDRYAQMRNVWFLPSVAALELWLRRAGFADARCVDVSLTSVEEQRSTEWMRFQSLPEFLDPQDRSRTVEGLPAPMRATLVARKP
What is the function of this protein?
Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
What are the official names of this protein?
tRNA U34 carboxymethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoB family.
Protein: VP80_NPVAC
Sequence: MNDSNSLLITRLAAQILSRNMQTVDVIVDDKTLSLEEKIDTLTSMVLAVNSPPQSPPRVTSSDLAASIIKNNSKMVGNDFEMRYNVLRMAVVFVKHYPKYYNETTAGLVAEIESNLLQYQNYVNQGNYQNIEGYDSLLNKAEECYVKIDRLFKESIKKIMDDTEAFEREQEAERLRAEQTAANALLERRAQTSADDVVNRADANIPTAFSDPLPGPSAPRYMYESSESDTYMETARRTAEHYTDQDKDYNAAYTADEYNSLVKTVLLRLIEKALATLKNRLHITTIDQLKKFRDYLNSDADAGEFQIFLNQEDCVILKNLSNLASKFFNVRCVADTLEVMLEALRNNIELVQPESDAVRRIVIKMTQEIKDSSTPLYNIAMYKSDYDAIKNKNIKTLFDLYNDRLPINFLDTSATSPVRKTSGKRSAEDDLLPTRSSKRANRPEINVISSEDEQEDDDVEDVDYEKESKRRKLEDEDFLKLKALEFSKDIVNEKLQKIIVVTDGMKRLYEYCNCKNSLETLPSAANYGSLLKRLNLYNLDHIEMNVNFYELLFPLTLYNDNDNSDKTLSHQLVNYIFLASNYFQNCAKNFNYMRETFNVFGPFKQIDFMVMFVIKFNFLCDMRNFAKLIDELVPNKQPNMRIHSVLVMRDKIVKLAFSNLQFQTFSKKDKSRNTKHLQRLIMLMNANYNVI
What is the function of this protein?
Structural protein that plays a role in the packaging of nucleocapsids and in their egress from the nucleus toward the cell periphery.
What are the official names of this protein?
Capsid-associated protein VP80.
What are the subcellular locations of this protein?
Host nucleus. Virion. Note=Capsid-associated. Present in both the budded virus (BV) and the occluded virus (OV). The occluded form allows the virus to be transmitted from insect to insect through ingestion of contaminated food while the budded form is responsible for the dissemination of infection throughout the insect host.
Protein: SYA_FRATH
Sequence: MITTKELRNKFINYFESKNHSHQPSSSLIPFGDDTLLFTNAGMVQFKDVFLGIEKKDFSRAVTVQKCLRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKEAISFAWEFLTKEIKLPVEKLWVTIYASDDEAFDVWHKHIGLAKERIIRIDSSDNFWSMGDTGPCGPCTEIFYDHGEDVAGGLPGTPEQDGDRYIEIWNIVFMQYNRHADGSTTDLPKPSVDTGMGLERISAVLQNVHSNYEIDLFQALIKKAQQVTHAKDINSPSLKVIADHIRACAFLIADGVLPANEGRGYVLRRIIRRAIRHGNKVGAKEIFFYKLVAELVSQMGEAYSQLIDKRELIEKTLIKEEELFLKTIENGIKIFDAEIENLKDNTISGEVAFKLYDTYGFPFDLTADMAREKGLKVDEQAFLAQMQIQKQRSKEAGKFNVDYNSLINSQVKSEFRGYSTLIEDAKVLEIYQDGQLVASTSEQVSAVVVLDKTPFYAESGGQVGDKGILEGVGFEFVVEDVQKSGEAILHIGKLVKGRLNLNDELTARVSDKPRLATAANHSATHLLYKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIELLVNQQIRANYPVTTIETSQQKAKSLGAEALFGEKYGDIVRVISMGDFSIELCGGTHVAYTGDIGLFKVTSEGSIASGVRRIEAVTADKAIRHTFTNENKIIAIKDSLKANDTNLIDKIKSMLEQIKNQEKQIAKLKKELLSGSSNDIKETSIGDIKIVVANVDGVDVKTLRNKIDDYKSKNTKVIAVLTTTNADKVQFVIGVSNALTTLIKAGDIAKELSSHIDGKGGGRADMAQGGGNNSANIDQALSQVEKFILNNIKE
What is the function of this protein?
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala).  Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
What are the official names of this protein?
Alanine--tRNA ligase, Alanyl-tRNA synthetase, AlaRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PIMT_SODGM
Sequence: MVDVRTQTLLAQLRQQGIRDERLLQAMEAVPREHFIDEAFEHKAYDNTALPIGLGQTISQPYIVARMTELLALWPESRVLEIGTGSGYQTAILAHLVKHVCSVERIKKLQWQAKRRLKLLDLHNISTRHGDGWQGWLSRGPFDAIIVTAAPPEIPQALMAQLDEGGVMVLPVGDEQQHLTRVRRKGGEFVVDTVEAVRFVPLVKGELA
What is the function of this protein?
Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues.  It plays a role in the repair and/or degradation of damaged proteins.
What are the official names of this protein?
Protein-L-isoaspartate O-methyltransferase, L-isoaspartyl protein carboxyl methyltransferase, Protein L-isoaspartyl methyltransferase, Protein-beta-aspartate methyltransferase, PIMT.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SSX3_HUMAN
Sequence: MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE
What is the function of this protein?
Could act as a modulator of transcription.
What are the official names of this protein?
Protein SSX3, Cancer/testis antigen 5.3, CT5.3.
What is the protein family that this protein belongs to?
Belongs to the SSX family.
Protein: RL36_BACMK
Sequence: MKVRPSVKPICEKCKVIRRRGKVMVICENPKHKQKQG
What are the official names of this protein?
50S ribosomal protein L36.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL36 family.
Protein: Y1325_CITK8
Sequence: MEMDLNNRLTEDETLEQAYDIFLELAADNLDPADIILFNLQFEERGGAELFDPSEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDIFARVLLCREKDHKLCHILWRE
What are the official names of this protein?
UPF0263 protein CKO_01325.
What is the protein family that this protein belongs to?
Belongs to the UPF0263 family.
Protein: TTCA_DEIGD
Sequence: MTQIADPSILFPPLVKGAAQAITDYRMIEEGDRVMVCLSGGKDSYTLLDILLHLQKRAPIHFEVVAVNLDQGQPGFPKHVLPEYLTRLGVPFDILTEDTYSIVKEKTPEGKTTCALCSRLRRGILYRHAREIGATKIALGHHRDDILETLFMNMFFGARLKAMPPKLQSDDGTNVVIRPLAYLAERDIERYAQAKGFPIIPCNLCGSQPNLQRRVVGEMLEGWEREHPGRLQNILRSLTRVTPSHLLDRDLYDFAGLSVTPAEGDRGFDGEEYPEREFLAGLSNLTLLG
What is the function of this protein?
Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32).  The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
What are the official names of this protein?
tRNA-cytidine(32) 2-sulfurtransferase, Two-thiocytidine biosynthesis protein A, tRNA 2-thiocytidine biosynthesis protein TtcA.
What is the protein family that this protein belongs to?
Belongs to the TtcA family.
What are the subcellular locations of this protein?
Cytoplasm.