PharMolix/UniProtQA huggingface dataset:
Protein: RS12_SHESA
Sequence: MATVNQLVRKPRAPKVDKTNVPALNACPQKRGVCTRVYTTTPKKPNSALRKVARVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCAGVNTRRQGRSKYGAKRPKS
What is the function of this protein?
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone.  Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together.  The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.
Protein: ATPD_CYTH3
Sequence: MKETRVAYRYAKSLIDLAAENGVLDRVNADMAGIESVFKQNHQLVAVMKNPIVQGDKKHAILEALFGGKVDNFTMSLLSLLTKKHREAVVFEISSEFQRQYREKMGIKIVEVTTTQPITEDQRANFKAIMASKASKVELIEKIDEKILGGFVLKMDDQQIDESVIAKLNKIKNKFTEQVINY
What is the function of this protein?
This protein is part of the stalk that links CF(0) to CF(1).  It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.
What are the official names of this protein?
ATP synthase subunit delta, ATP synthase F(1) sector subunit delta, F-type ATPase subunit delta, F-ATPase subunit delta.
What is the protein family that this protein belongs to?
Belongs to the ATPase delta chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: GLGA_CHLCH
Sequence: MSRRNSKVLYVSGEVAPFVRITALADFMASFPQTVEDEGFEARIMMPKYGIINDRKFRLHDVLRLSDIEVHLKDKVDMLDVKVTALPSSKIQTYFLYNEKYFKRHAWFPDLSTGNDARVTVEKIVFFNVGVLETLLRLGWKPDIIHCNDWHTALIPLLLKTMYASHEFFRNVKTLFSIHNAYRQGNFPLKHFQRLLPDEVCAGLHCVKDEVNLLFTGIDHVELLTTTSPRYAECLRGDTPEAFGVGKRLLERELPLHGMVNGLDARQWNPAIDKMIKKRYSTENMNGKVENRKMLLEEMKLPWRDGMPLVGFIATFDDYQGAKLLADSLEKLIAQDIQLVIIGFGDKKCEQRFQEFVVAHPEQVSVQAECSDSFLHLAIAGLDLLLMPSKVESCGMLQMSAMTYGTIPIARATGGIVETIQDHGENLGTGFLFDDYSVEGLSGRLADALRCFHDDECWPALVERAMSSDFSWHNTAEAYGQLYRNLLGK
What is the function of this protein?
Synthesizes alpha-1,4-glucan chains using ADP-glucose.
What are the official names of this protein?
Glycogen synthase, Starch [bacterial glycogen] synthase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
Protein: NUOI_BRUA2
Sequence: MASIAQAAKSLLLKEFASAFALSMRQFFAPKATLNYPHEKGPVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAIVEGPNFEFATETREELYYDKDKLLANGDRWEREIARNIAMDAPYR
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit I, NADH dehydrogenase I subunit I, NDH-1 subunit I.
What is the protein family that this protein belongs to?
Belongs to the complex I 23 kDa subunit family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: GPDA_METFK
Sequence: MKISILGAGAWGTALALQISRRHQVSLWTRNQAHIVDMQVTRANLQYLGDFAFGDQLAVEGDLGRALDGADLIVSVVPTNGFRNALKEIKRLGCDAPVVWASKGLEAATAKLPHEVAQDELGDSRHWGVLSGPSFAAELVRGLPTAVTLAANDAEFAARAGAMLHGGNFRVYTSTDVIGVSVGGALKNVLAIAAGISDGMQCGNNARAALITRGIAEMTRFGVALGGAKETFMGLTGAGDLILTCTGQYSRNREVGLRLANGQTLQEILKTLGHVAEGVHTAREVVKRAGQLGVEMPITQEVDQVLSHGRSPRQAMENLLSREQKSEAL
What are the official names of this protein?
Glycerol-3-phosphate dehydrogenase [NAD(P)+], NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1029_THESM
Sequence: MKLIPLASESLGVRSLATFLEIGKIGILIDPGAALGPKRYSLSPAKAELEALQKAREKIQQYSRKAQIITISHYHYDHHTPFFEGIYESSSPEKAKDIYSRKTLFIKHPRENINFSQKKRAWAFLKEAEKIVEKIEHADGKFFDFGDFIMEFSPAVPHGSEGSKLGFVVMVMVDDGKQRLIHASDIQLLNRASKEWIIKQMPDLLITGGPPTYLEGYRVKEAWSTGLKNLNEIIKETNAEVILDHHLIRDKRYPEFLEQLEKQALTFARFLKKEDRPLEAYRKELHKIEKGEEAEVPFDVGWYL
What are the official names of this protein?
UPF0282 protein TSIB_1029.
What is the protein family that this protein belongs to?
Belongs to the UPF0282 family.
Protein: DDB1_SOLLC
Sequence: MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYGRIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVLYQDNKDARHVKTYEVSLKDKDFIEGPWAQNNLDNGASLLIPVPPPLCGVLIIGEETIVYCSASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGLLHLLVITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQVLLATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIGENPNYSNIAAVGMWTDISVRIYSLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVKYTQSNADDPEMHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDDSNVYYCIGTAYVMPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH
What is the function of this protein?
Component of light signal transduction machinery.  Involved in fruit pigmentation and fruit nutritional quality.  Acts as a negative regulator of fruit pigmentation.  Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes.  Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5.
What are the official names of this protein?
DNA damage-binding protein 1, High pigmentation protein 1, UV-damaged DNA-binding protein 1.
What is the protein family that this protein belongs to?
Belongs to the DDB1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: FRM2_YEAST
Sequence: MSPTGNYLNAITNRRTIYNLKPELPQGVGLDDVKRTVHVILKNTPTAFNSQVNRAVIIVGDTHKRIWDAVASAMPTAEAKKRPESCRDEAYGSVIFFTDEGPTEKLQRDFPALAAAFPTCAAHTTGAVQIQSWTALELLGLGANLQHYNDYVKSALPQDVPIAWTVQSQLVFGVPTALPEEKTFINNVINVYH
What is the function of this protein?
Involved in negative regulation of fatty acid metabolism.
What are the official names of this protein?
Fatty acid repression mutant protein 2.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: MURC_PSEMY
Sequence: MAKSPAAVKAEVRRMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASAVTERLESFGAKIFIGHAAENAEQADVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSLLASVFAAGGLDPTFVIGGRLNAAGTNAQLGSSRFLIAEADESDASFLHLQPMVSVVTNIDADHMSTYGGDFNRLKKTFIEFLHNLPFYGLAVLCVDDPVVRELLPQVGRPTVTYGFAEDADVRAINVRQEGMRTYFTVLRPDCEPLDVSVNMPGNHNVLNALATIAIATDEGIDDAAIVAGLSGFQGVGRRFQVYGELPVDGGSVMLVDDYGHHPREVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGEANVLLLVEVYPAGEEPIPGADSRQMCHSIRQRGQLDPIYVERGVDLAPLLKPLLRAGDILLCQGAGDIGAVAPQLIKHPLFVGESK
What is the function of this protein?
Cell wall formation.
What are the official names of this protein?
UDP-N-acetylmuramate--L-alanine ligase, UDP-N-acetylmuramoyl-L-alanine synthetase.
What is the protein family that this protein belongs to?
Belongs to the MurCDEF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YICS_SALPA
Sequence: MKRKTLLLIAALVALPGVTYADSPFSSLQSAHEKNTILKDLRKMCTPKGALTDEAWEKKIMASEGNQQHIREAMIAIERNNQHNYWQALGKVECPEM
What are the official names of this protein?
Uncharacterized protein YicS.
Protein: TRMA_VIBVY
Sequence: MATLDVNPQRYQQQLAEKVQRLTDMFAPYQAPELEVFESPEQHYRMRAEFRVWHEGEEMYYIMFNQETREKYRVDQFPAASRLINDLMPLLIDAMKDNESLRRKLFQVDFLSTLSGEILVSLLYHRQLDDAWIENAKALKQRLNDEGFDLNLIGRARKMKIVLDRDYVVEKLDVNGKPYVYQQVENSFTQPNGKVAEKMLEWAVDCTQESQGDLLELYCGNGNFSLALAQNFERVLATELAKPSVESAQYNIAANKIENVQIIRMSAEEFTEAMEGKREFRRLKDNGIDLKSYNCNTIFVDPPRSGMDVDTCKMVQGYERILYISCNPETLKENLDILSETHHITRFALFDQFPYTHHMEAGVMLERKA
What is the function of this protein?
Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).
What are the official names of this protein?
tRNA/tmRNA (uracil-C(5))-methyltransferase, tRNA (uracil(54)-C(5))-methyltransferase, tRNA(m5U54)-methyltransferase, RUMT, tmRNA (uracil(341)-C(5))-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. TrmA subfamily.
Protein: SAR1_PICST
Sequence: MWLFDWFQDVLSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYNTTGKDTGKLPEGSRPIEVYMVSVVMRSGYGEGFKWLSQYI
What is the function of this protein?
Small GTPase component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER).  The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.  SAR1 controls the coat assembly in a stepwise manner.  Activated SAR1-GTP binds to membranes first and recruits the SEC23/24 complex.  These SEC23/24-SAR1 prebudding intermediates are then collected by the SEC13/31 complex as subunits polymerize to form coated transport vesicles.  Conversion to SAR1-GDP triggers coat release and recycles COPII subunits (By similarity).
What are the official names of this protein?
Small COPII coat GTPase SAR1.
What is the protein family that this protein belongs to?
Belongs to the small GTPase superfamily. SAR1 family.
What are the subcellular locations of this protein?
Cytoplasmic vesicle, COPII-coated vesicle membrane; Peripheral membrane protein; Cytoplasmic side. Endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side. Golgi apparatus membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: VMA21_BOVIN
Sequence: MERLDKAALNALQPSDFRNESSLASTLKTLLFFTALMITVPIGLYFTTKSYVFEGAFGMSNRDSYFYAAIVAVVAVHVVLALFVYVAWNEGSRQWREGKQD
What is the function of this protein?
Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum.
What are the official names of this protein?
Vacuolar ATPase assembly integral membrane protein VMA21.
What is the protein family that this protein belongs to?
Belongs to the VMA21 family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein. Endoplasmic reticulum-Golgi intermediate compartment membrane; Multi-pass membrane protein. Cytoplasmic vesicle, COPII-coated vesicle membrane; Multi-pass membrane protein.
Protein: BPT_PSEPG
Sequence: MTELARLKFYATQPHSCSYLPDEQATTLFLDPSQPMDVNVYADLSEMGFRRSGDHLYRPHCQNCNACVPARIPAARFIPNRQQRRILKRNADLTVTAARPAFKEEYFELYRRYIETRHADGDMYPPSRDQFSTFLVRDLPFCWFYEFRLEGHLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQITEALRQDLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVTLN
What is the function of this protein?
Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate.
What are the official names of this protein?
Aspartate/glutamate leucyltransferase.
What is the protein family that this protein belongs to?
Belongs to the R-transferase family. Bpt subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KPTA_RHIL3
Sequence: MMKARLETEVSKYMSYVLRHAPDAAGLTLDSGGWVSFDELEKALASKYDVSRAEIIEIVENNPKKRFTLAHNRIRANQGHSVDIDLALNQAEPPAALFHGTSLTNWQSIEREGLKKMQRHHVHLSADVETAKIVAARRKGEHIILRVDAARMFSEGHSFFVSDNGVWLAESVPVQYLSRNAGTP
What is the function of this protein?
Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate (APPR>P).  May function as an ADP-ribosylase.
What are the official names of this protein?
Probable RNA 2'-phosphotransferase.
What is the protein family that this protein belongs to?
Belongs to the KptA/TPT1 family.
Protein: ROH1_ARATH
Sequence: MRPAQDNQGSFLGRISIRRNQFVDVNNEQEQEDLELFQKHIADRFTELLSPPQPPPSDEINTVASVAATEQIMSVTWLRKLMDVFLCCEAEFKAILLMGRDPTQISKPPFDRLVPEMLDRSIKALDICTAVVNGIDSVRHYQRLAEIAVTALEQRPLGDGNVRRAKRALANLVVALSLEDKENVSGGGGGGGGGNKTTERSWSFGRRSGGSSAASKGGATIGQLKSSSWAVGRNWSAAKQIHAMTANLTPPRGNEAAGLPQPMFIMSTVMVFVMWVLTAAVPCQERSGLANHLPVPPKHLNWAQSLIGIHEKIGDEWKKKEKKGSAGLMEEMTRMEKLGHSLMEFADGFHYPAEKDAAESAAVQVAEMAEICRRMEEELVPLQQQIREVFHRIVRSRAEILEVLEQAGKVSAPVV
What is the function of this protein?
Required for seed coat mucilage deposition.
What are the official names of this protein?
Protein ROH1.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.
Protein: PETG_PSINU
Sequence: MVEALLSGIVLGLISITSAGLFVTAYLQYRRGDQLDL
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.  PetG is required for either the stability or assembly of the cytochrome b6-f complex.
What are the official names of this protein?
Cytochrome b6-f complex subunit 5, Cytochrome b6-f complex subunit PetG, Cytochrome b6-f complex subunit V.
What is the protein family that this protein belongs to?
Belongs to the PetG family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: MOMPK_CHLPN
Sequence: MKKLLKSALLSAAFAGSVGSLQALPVGNPSDPSLLIDGTIWEGAAGDPCDPCATWCDAISLRAGFYGDYVFDRILKVDAPKTFSMGAKPTGSATANYTTAVDRPNPAYNKHLHDAEWFTNAGFIALNIWDRFDVFCTLGASNGYIKGNSTAFNLVGLFGVKGTSVAANELPNVSLSNGVVELYTDTSFSWSVGARGALWECGCATLGAEFQYAQSKPKVEELNVICNVAQFSVNKPKGYKGVAFPLPTDAGVATATGTKSATINYHEWQVGASLSYRLNSLVPYIGVQWSRATFDADNIRIAQPKLPTAVLNLTAWNPSLLGNTTTLATSDSFSDFMQIVSCQINKFKSRKACGVTVGATLVDADKWSLTAEARLINERAAHVSGQFRF
What is the function of this protein?
Permits diffusion of specific solutes through the outer membrane.
What are the official names of this protein?
Major outer membrane porin, MOMP.
What is the protein family that this protein belongs to?
Belongs to the chlamydial porin (CP) (TC 1.B.2) family.
What are the subcellular locations of this protein?
Cell outer membrane; Multi-pass membrane protein.
Protein: RS13_BACAH
Sequence: MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDIIDRIKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: LUXC2_PHOLE
Sequence: MIKKIPMIIGGVVQNTSGYGMRELTLNNNKVNIPIITQSDVEAIQSLNIENKLTINQIVNFLYTVGQKWKSETYSRRLTYIRDLIKFLGYSQEMAKLEANWISMILCSKSALYDIVENDLSSRHIIDEWIPQGECYVKALPKGKSVHLLAGNVPLSGVTSILRAILTKNECIIKTSSADPFTATALVNSFIDVDAEHPITRSISVMYWSHSEDLAIPKQIMSCADVVIAWGGDDAIKWATEHAPSHADILKFGPKKSISIVDNPTDIKAAAIGVAHDICFYDQQACFSTQDIYYIGDSIDIFFDELAQQLNKYKDILPKGERNFDEKAAFSLTERECLFAKYKVQKGESQSWLLTQSPAGSFGNQPLSRSAYIHQVNDISEVIPFVHKAVTQTVAIAPWESSFKYRDILAEHGAERIIEAGMNNIFRVGGAHDGMRPLQRLVNYISHERPSTYTTKDVSVKIEQTRYLEEDKFLVFVP
What is the function of this protein?
LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase.
What are the official names of this protein?
Long-chain acyl-protein thioester reductase 2, Acyl-CoA reductase 2.
What is the protein family that this protein belongs to?
Belongs to the LuxC family.
Protein: CGRF1_HUMAN
Sequence: MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFSTRVFKKQMRQVKNPFGLEITNPSSASITTGITLTTDCLEDSLLTCYWGCSVQKLYEALQKHVYCFRISTPQALEDALYSEYLYQEQYFIKKDSKEEIYCQLPRDTKIEDFGTVPRSRYPLVALLTLADEDDREIYDIISMVSVIHIPDRTYKLSCRILYQYLLLAQGQFHDLKQLFMSANNNFTPSNNSSSEEKNTDRSLLEKVGLSESEVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCSQKEQDKDKPKTL
What is the function of this protein?
Able to inhibit growth in several cell lines.
What are the official names of this protein?
Cell growth regulator with RING finger domain protein 1, Cell growth regulatory gene 19 protein, RING finger protein 197.
What are the subcellular locations of this protein?
Nucleus. Endoplasmic reticulum.
Protein: Y1521_PARL1
Sequence: MTEIYVDADACPVKDEAVKVAERHGLTVHIVSNSGMRPTGHPLVKQVVVPAGPDVADDWIAERAGPQDIVITGDIPLAARALEKGAAALGHDGRPFTQDSIGMALAMRDLMRELRETGQSKGGGPAFSKEDRSRFLRSLEDTVQAIRRRPPP
What are the official names of this protein?
UPF0178 protein Plav_1521.
What is the protein family that this protein belongs to?
Belongs to the UPF0178 family.
Protein: SSRP_SALNS
Sequence: MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: PCXA_TRIV2
Sequence: MPTMRNSIFSEKVYPILLSAYRWYLRTPERSLEEAYKAALNIKAIEDEHFNGNKIDFNSAIYSNSVMDYFESDLAQELKTARMRLTEFRFSRWFSNESHQKAARKAGIEYPSSTVILEKLKFIDEIISKYIITDYEIAAPSGASDLQVRTTSLQPPENPSLTDSLRNNDINKNNLVERIYTPTSPPQLIRPRTEQNKKPRGKADTTGILPRSILSTIGRLQIELDPNSEQDVINNFRQAQKRSIISIRFILLLIIVPLLTHQLSKALIVSPIFNHFKKADTEQIFLNSEMEEEALSTLHRFEERIKFENLISNAPPLSAEAIETQIKEKAEEIAAEFRGESANAIKNVFADIFSVGAFIWLLLVSKPSIMVLKEFFDNVVYGLSDSAKAFIIILFTDVFVGFHSPHGWEVILEGLSRHWGLPANRDFIFLFIATFPVILDTIFKYWIFRYLNRISPSAVATYRNMNE
What is the function of this protein?
Involved in light-induced Na(+)-dependent proton extrusion.  Also seems to be involved in CO(2) transport.
What are the official names of this protein?
Proton extrusion protein PcxA.
What is the protein family that this protein belongs to?
Belongs to the Cema family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RS17_SERP5
Sequence: MTDINRTLQGRVISDKMEKSMVVAIERTVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAIL
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: ISPG_BRUME
Sequence: MSSETVSYFSHPFPRRQSVGVSVGGVIVGGSAPVVVQSMTNTDTADVDSTVAQVAALHRAGSEIVRITVDRDESAAAVPKIRERLERLGHDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFADIVEMAIRYDKPVRIGVNWGSLDQELLTTLMDRNQAEGAPLSAQDVMREAIVQSALISANLAEEIGLGRDKIILSAKVSQVQDLIAVYTMLAQRSNHALHLGLTEAGMGTKGIVASSAAMGILLQQGIGDTIRISLTPEPGGDRTREVQVAQELLQTMGFRQFVPIVAACPGCGRTTSTVFQELAQTIQEDIRRNMPLWREKYPGVEALSVAVMGCIVNGPGESKHADIGISLPGTGETPSAPVFVDGKKVTTLRGPGIAEDFQKMVADYIENRFGLGRKIAS
What is the function of this protein?
Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.
What are the official names of this protein?
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase.
What is the protein family that this protein belongs to?
Belongs to the IspG family.
Protein: RSMA_RHORT
Sequence: MSDPIDVAAETPGDGLPPLREVIATHGLDARRSLGQNFLFDLNLTGRIARAGGEIDQGTVIEIGPGPGGLTRALLGAGARRVIAIERDSRCRGVLAEIAAVWPGRLETIEGDALDIDVAALGEAPRRVIANLPYNVATPLLIGWLRHASAFERFVLMFQKEVVDRLAARPGTKDYGRLSVITQWLCEVRPLFDVNPRAFTPPPKVVSTVVRIDPRPQPLAPARMETLERVTAAAFGQRRKMLRASLKALGDAEGLCAAAGLDPTARAETIPVEGFAALARAVDAAGSV
What is the function of this protein?
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle.  May play a critical role in biogenesis of 30S subunits.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase A, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase, 16S rRNA dimethyladenosine transferase, 16S rRNA dimethylase, S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y3952_YERE8
Sequence: MIIPWQQVDSETLDNLLEAFVLREGTDYGEHERSLEQKVEDVRRQLVSGEAVLVWSELHETINIMPRGAFRAGAEELP
What are the official names of this protein?
UPF0270 protein YE3952.
What is the protein family that this protein belongs to?
Belongs to the UPF0270 family.
Protein: MURC_BACC3
Sequence: MTVYHFVGIKGTGMSSLAQILHDMKHTVQGSDYEKRFFTQTALEKRNISILPFDKSNVKEGQVIIAGNAFPDTHEEIVAAKELNIPVHRYHHFLGDLMNQYTSVAVTGAHGKTSTTGLLAHVMQGAHPTSYLIGDGTGHGVENSKYFVFEACEYRRHFLSYNPDYAIMTNIDFDHPDYFTDINDVFSAFQEMALQVKKGIIACGDDEELQKIQAKVPVIFYGFGEDNDFQARNIQKRTDGTIFDVFVRNTYYDTFKITGYGNHSVLNALAVIALCHYENVDVEAVKHQLTTFEGVKRRFNEKPMGEQVIIDDYAHHPTEINATIEAARQKHPEREIVAVFQPHTFSRTEKFLDEFAESLSKADQVYLCDIFGSARENKGELTIEDLQKRIDGAELITDTTTDVLKKHKNGVLIFMGAGDIQKFEAAYVKEVQVAEK
What is the function of this protein?
Cell wall formation.
What are the official names of this protein?
UDP-N-acetylmuramate--L-alanine ligase, UDP-N-acetylmuramoyl-L-alanine synthetase.
What is the protein family that this protein belongs to?
Belongs to the MurCDEF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ISPF_MANSM
Sequence: MIRIGHGFDVHAFGEARPLIIGGVEVPYHTGFIAHSDGDVALHALTDALLGALALGDIGKLFPDTDMQFKNIDSRILLREAFRRVQEKGYKIGNVDVTIIAQAPKMRPHIDAMRAVIAEDLQCSVEQVNVKATTTEKLGFTGRSEGITTEAVALLVKSC
What is the function of this protein?
Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds.  Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
What are the official names of this protein?
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MECDP-synthase, MECPP-synthase, MECPS.
What is the protein family that this protein belongs to?
Belongs to the IspF family.