PharMolix/UniProtQA huggingface dataset:
Protein: CLP1_CHICK
Sequence: MADDGGDEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVFGTELTRNKKFTFDAGAKVAVFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSLQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRIREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIRFMDLK
What is the function of this protein?
Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids.  dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component.  Plays a role in both tRNA splicing and mRNA 3'-end formation.  Component of the tRNA splicing endonuclease complex: phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; this phosphorylation event is a prerequisite for the subsequent ligation of the two exon halves and the production of a mature tRNA.  Its role in tRNA splicing and maturation is required for cerebellar development.  Component of the pre-mRNA cleavage complex II (CF-II), which seems to be required for mRNA 3'-end formation.  Also phosphorylates the 5'-terminus of exogenously introduced short interfering RNAs (siRNAs), which is a necessary prerequisite for their incorporation into the RNA-induced silencing complex (RISC).  However, endogenous siRNAs and microRNAs (miRNAs) that are produced by the cleavage of dsRNA precursors by dicer1 already contain a 5'-phosphate group, so this protein may be dispensible for normal RNA-mediated gene silencing (By similarity).
What are the official names of this protein?
Polyribonucleotide 5'-hydroxyl-kinase Clp1, Polyadenylation factor Clp1, Polynucleotide kinase Clp1, Pre-mRNA cleavage complex II protein Clp1.
What is the protein family that this protein belongs to?
Belongs to the Clp1 family. Clp1 subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: IKBB_HUMAN
Sequence: MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLGAELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTALHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREAPDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIHKDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTPLGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGDEYDDIVVHSSRSQTRLPPTPASKPLPDDPRPV
What is the function of this protein?
Inhibits NF-kappa-B by complexing with and trapping it in the cytoplasm.  However, the unphosphorylated form resynthesized after cell stimulation is able to bind NF-kappa-B allowing its transport to the nucleus and protecting it to further NFKBIA-dependent inactivation.  Association with inhibitor kappa B-interacting NKIRAS1 and NKIRAS2 prevent its phosphorylation rendering it more resistant to degradation, explaining its slower degradation.
What are the official names of this protein?
NF-kappa-B inhibitor beta, NF-kappa-BIB, I-kappa-B-beta, IkB-B, IkB-beta, IkappaBbeta, Thyroid receptor-interacting protein 9, TR-interacting protein 9, TRIP-9.
What is the protein family that this protein belongs to?
Belongs to the NF-kappa-B inhibitor family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: LIPA_SALDC
Sequence: MSKPIVMERGVKYRDADKMALIPVKNVVTERDALLRKPEWMKIKLPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDAEEPQKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIRAKSPEIKIETLVPDFRGRMDRALDILNATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGETNAEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPEEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK
What is the function of this protein?
Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
What are the official names of this protein?
Lipoyl synthase, Lip-syn, LS, Lipoate synthase, Lipoic acid synthase, Sulfur insertion protein LipA.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily. Lipoyl synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL17_ACIF5
Sequence: MRHRKSGKQLNRNSSHRQAMFANMMVSLFHHERIVTTLPKAKELRRFAEPMITLAKEATVAKRRLAFSRLRDRQAVVKLFDDLGPHYLARPGGYLRIVKYGFRAGDNAPLAIVELVDRQTAAAE
What are the official names of this protein?
50S ribosomal protein L17.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL17 family.
Protein: PRM1_CRYNB
Sequence: MSYPQAPSKFVNPDEIIPLSPPTKPPFAQYAASPLPATPHTPYSPPSPSRLSETIPLRPYLSLLPRILLTFFSPCLLPMILTIAHLIQNRSSTASLATSLKSSVLSACSGLAKGAASIKTLPRYLAMQTNQEAIRATQASILAIGTMLMDAITIIEVVVNFIVDTYRSLLLCTIELAVRGTLEILISAVQTISDAVTDTLNSVRSNIQDDIGDANDIIQTAVSAINRVTTLVNLNISVPEFSIPALSFLQNVTIPTTFEDGLITLNSSLPTLTDLKKKMDEIIDTPFEALISEINSTRLEMAASFNSSILSVPSLSSLSANSAKDLSNDLCSDLDTSLIDDTAKALHKLSSIAIGLMFLLLFLIWAALAVWEWRKWKLMKDTVDAVNEEWDRDGKSDAWRMVAIVEHPVLERYSGTFLGKIAKMPRTRTNLRWFLSYLAHPTCLALLFISLFGFLSIQFQLVALNALKAHAQSSANSTVTASTNSLVTKLNAAALNSSQEYADSYNEAIAGYQDRINNELFGSWVNTTAITLNSTLVEFYDEVEKALNASFGGTILYNPINTFMYCILGSKITNLEKGLTWISEHAFVDLPTFPSDILLLSNDSMNEIATPIAAAAVGSGDGGDDDDGVVGTLISHFESALKVERTFYGIMLGVWLALFLIGLAVVIWNSGGRENFMALRGVPSSSSPPGYGPPESKHPRWKAWLTNNHPIYDSYAEKQFRGTTPTNCLESYTHADVPNVNNGNDDHEKSFFKMRDSHAAGPFGSHATSAVRSTIASLAAPGQSFLKLSGRKLTDTTTPYDDKVPLAPVQTSEKYSRDHANSPFPRPSSESSESSAAQPFWVDKFYGAFEGVKSFFPTRSQRLGAALARKASQRTEGSFGASQVPTARTPGHDWIGGHQCPPEKKAEPEWSMVDPRMLGRALEDDKGRYPRVLPPSEMAAANYNPHPVYPRPMSRAPTLGEGMVIPSTTSHPDPFQDMPPLPPKHKRASMDYVEEYESSHSRSSREDSRHGGVTSPASSSVSYFAAEPQLVSASKVQVGVAQKGGQATRALAEIVKELQEKRERKDPFGDDYERGL
What is the function of this protein?
Involved in cell fusion during mating by stabilizing the plasma membrane fusion event.
What are the official names of this protein?
Plasma membrane fusion protein PRM1.
What is the protein family that this protein belongs to?
Belongs to the PRM1 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: ATG13_PHANO
Sequence: MNPYQRASPRTASPASNLQTNPTRTNNPRHSADRNSYFDNPPYNDRGSEDGEDDMASRGDHMAETDQRQYQKINQVIQNFFTKSALSIVSSRVILPTSFNKNGDIRQNKWFNVILDDSDELQLRLTEWKTMDAMAGQHPPLYIEVYLDISGLGHKQSLVVHDEDGKRWDVAAALNAAQPTSRASSRPARPTQIVIERWKIYVGDIDSVHPSDLTEPLPNVYKKAVVLFRGLYANLRLLPAFKYNKSMAKQPANHTSLKLNYRILNGASERPQLDTLSLPLCPSTDPITETAHIGSTNSPIGPLCISVEYRDACEFSVEDSESLLSDQFMGLDDTYLEQKPRAAAPVPGSLPVDKLNTQETPDVGQAYGSLSTFHQVGPPTGTSPISALRAARDMPSSSPIETPPQKLPPNHRTAQGSKSSLRSNDTSSFQRRTSVSFQPFKAGSLSSSPAPGPAGPASPSSSLGRPTSAFGRNINIVPNSLNQPRNRTSLNALPQAALRAPSLPNDNAIASSASSSPKPAPITRYSSSFGHRRGKFSTGGSKTEEDALSSGKGSATSSLQRGSDTLNDGEGGSSGEMRSEDDNISDFLKLLEAKKDLKSFNRSDSSTRDATMRKTTAQLGKYQRMRDSHAQLSDSVSSSTMLHRSSSSSSRQLSSVPAMIHGTSISTASSPGKPISPHTPHTPAIPSRLSANSIIEYDQPHRSRNHRSRSRSGRTARGQGPENLEEQSEVEDDAAGIDIPLSPRPWNYQRRSSSVAQQNRNLPEDEPDMFGVRAASLPVEEGDRARDLHRITSTDLTSSGLFAQTESLASASRDNQAPDDGDSRDDLPRASSTSNTPAKRGTYSSNLRGRGGFFSQGSSTTGSTGGTSSTERQSRYNFNSRAANLDDDEPLLFQMSEIGAGGSRRSLEEARGGSSTGSARGRNSPWGGR
What is the function of this protein?
Activates the ATG1 kinase in a nutritional condition dependent manner through the TOR pathway, leading to autophagy.  Also involved in cytoplasm to vacuole transport (Cvt) and more specifically in Cvt vesicle formation.  Seems to play a role in the switching machinery regulating the conversion between the Cvt pathway and autophagy.  Finally, ATG13 is also required for glycogen storage during stationary phase (By similarity).
What are the official names of this protein?
Autophagy-related protein 13.
What is the protein family that this protein belongs to?
Belongs to the ATG13 family. Fungi subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Preautophagosomal structure.
Protein: ARCA_BACCR
Sequence: MKHPIHVTSEIGELQTVLLKRPGKEVENLTPDYLQQLLFDDIPYLPIIQKEHDYFAQTLRNRGVEVLYLEKLAAEALVDKKLREEFVDRILKEGQADVNVAHQTLKEYLLSFSNEELIQKIMGGVRKNEIETSKKTHLYELMEDHYPFYLDPMPNLYFTRDPAASVGDGLTINKMREPARRRESLFMEYIIKYHPRFAKHNVPIWLDRDYKFPIEGGDELILNEETIAIGVSARTSAKAIERLAKNLFSRQNKIKKVLAIEIPKCRAFMHLDTVFTMVDYDKFTIHPAIQGPKGNMNIYILEKGSDEETLKITHRTSLMEALKEVLGLSELVLIPCGGGDVIASAREQWNDGSNTLAIAPGVVVTYDRNYVSNTLLREHGIEVIEVLSSELSRGRGGPRCMSMPIVRKDI
What are the official names of this protein?
Arginine deiminase, ADI, Arginine dihydrolase, AD.
What is the protein family that this protein belongs to?
Belongs to the arginine deiminase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYR_STAAT
Sequence: MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SSRP_STAAR
Sequence: MAKKKSPGTLAENRKARHDYNIEDTIEAGIVLQGTEIKSIRRGSANLKDSYAQVKNGEMYLNNMHIAPYEEGNRFNHDPLRSRKLLLHKREIIKLGDQTREIGYSIVPLKLYLKHGHCKVLLGVARGKKKYDKRQALKEKAVKRDVARDMKARY
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: EFG_TRIV2
Sequence: MARTNPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERGITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVRKRAYIYNNDQGTDIQETDIPADLQNQVEEYYTKLVEAVAETDDALMTKYFDGEALTEEEIRSALRQGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLANGDTVERRADDNEPLAALAFKIMADPYGRLTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDRQDVEELRAGDLGAALGLKDTLTGDTITDEGSPVILESLFIPEPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYRETIRKSVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAEQGMKESCESGILAGYPLIDVKATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLEPMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKVASKVPLATMFGYATDIRSKTQGRGIFTMEFSHYEEVPRSVAETIIAKSKGNA
What is the function of this protein?
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation.  During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively.  Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
What are the official names of this protein?
Elongation factor G, EF-G.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: COQ4_BOMMO
Sequence: MYLRKPIQKIKSEVQIRLIRYYTASENAKVTYHEEMQNNFIATNIFQKALLTCGSAVIALLDPHRGDMIACLGEVTGENAIKYMHSKMLQTEEGQDILKNKPRINSKTIAFETLSQMPENSLGRVYADFMKDNNITADSRLPVQFIADPELAYVMQRYREVHDLVHASLFMKTNMLGEVTVKWVEGIQTKLPMCIGGGIWGAARLRPKHRQMYLKYYLPWAIRTGNNAKFLQGIYFEKRWEQDIDDFHKEMNIVRLLKK
What is the function of this protein?
Component of the coenzyme Q biosynthetic pathway.  May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis.  Required for steady-state levels of other COQ polypeptides.
What are the official names of this protein?
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial, Coenzyme Q biosynthesis protein 4 homolog.
What is the protein family that this protein belongs to?
Belongs to the COQ4 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: MATK_ADEFA
Sequence: MEEFQGYLELDKYQQHDFLYPLIFREYIYALAYDHGLNRSILLDNVGYENKYSLLIIKRLISRMYKQNNFIISANDSNQNKFLGYNKNLYSQMISEGFAVIVEIPFSLRLVSSLEATEIVKSYNLRSIHSIFPFLEDKFSHLNYVSDVLIPYPIHLEILVQTLRYWVKDPSSLHLLRLFLHEYYNLNSLITPNKFIFSKSNPRLFLLLYNSHVCEYESILLFIRNQSSHLRLTSSGIFFERIHFYEKRKYPGEEVFSNDFPSAILWFFKDPFMHYVRYQGKSILASKDSALLMNKWKYYLVNLWQCHSYVWSQPGRICINQLSKHSIYFLGYFSSMRPNLSVVRSQMLENSFIMDNAMKKFDTLVPIIPLIRSLAKVKFCNTLGHPISKSAWADSSDFDIIDRFVRICRNLSHYYSGSSRKKSLYRIKYILRLSCVKTLARKHKSTVRTFLKRLGSKLLEEFFTEEQQILSLIFPRASYTLKKFYRGRIWYLDIFCINDLANHE
What is the function of this protein?
Usually encoded in the trnK tRNA gene intron.  Probably assists in splicing its own and other chloroplast group II introns.
What are the official names of this protein?
Maturase K, Intron maturase.
What is the protein family that this protein belongs to?
Belongs to the intron maturase 2 family. MatK subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RK20_PHATC
Sequence: MVRVKRGNVARKRRKKILALASGYRGAHSVLFRVANQQVMKALRYSYVGRKQKKRIFRRIWISRINAASRLNGISYSQLIHRFKKSNIDLNRKMLSQIAVLDTVAFKTLLNA
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: LARGN_MOUSE
Sequence: MSAKSKGNPSSSSAAEGPPAASKTKVKEQIKIIVEDLELVLGDLKDVAKELKEVVDQIDTLTSDLQLEDEMTDSSKTDTLNSSSSGTTASSIEKIKEQANAPLIKPPAHPSAILTVLRKPNPPPPPPRLTPVRCEEPQRVVPTANPVKTNGTLLRNGGLAGRPNKIPNGDICCIPNSNLDKAPLQSLMHRPEKDRSPQAGPRERVRFNEKVQYHGYCPDCESRYNIKNREVHLHSEPVHPPGKIPHQGPLLHPPPHLPNFPLENGGLGISHSNSFPPPTPATVPPPAAPKPQKTILRKSTTTTV
What is the function of this protein?
Regulator of cell size that promotes cell size increase independently of mTOR and Hippo signaling pathways.  Acts by stimulating the translation of specific mRNAs, including those encoding proteins affecting mitochondrial functions.  Increases mitochondrial mass and respiration (Probable).
What are the official names of this protein?
Protein Largen, Proline-rich protein 16.
Protein: CXA4_HUMAN
Sequence: MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKDPQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGMRARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERLASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV
What is the function of this protein?
One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
What are the official names of this protein?
Gap junction alpha-4 protein, Connexin-37, Cx37.
What is the protein family that this protein belongs to?
Belongs to the connexin family. Alpha-type (group II) subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein. Cell junction, gap junction.
Protein: TRIM9_MOUSE
Sequence: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENVEGLFFPAVSLNRNVQVSLWAPGLRACSGCYFKVCPGAVKSPQAPAP
What is the function of this protein?
E3 ubiquitin-protein ligase which ubiquitinates itself in cooperation with an E2 enzyme UBE2D2/UBC4 and serves as a targeting signal for proteasomal degradation.  May play a role in regulation of neuronal functions.  May act as a regulator of synaptic vesicle exocytosis by controlling the availability of SNAP25 for the SNARE complex formation.
What are the official names of this protein?
E3 ubiquitin-protein ligase TRIM9, RING-type E3 ubiquitin transferase TRIM9, Tripartite motif-containing protein 9.
What is the protein family that this protein belongs to?
Belongs to the TRIM/RBCC family.
What are the subcellular locations of this protein?
Cytoplasm. Cell projection, dendrite. Cytoplasmic vesicle, secretory vesicle, synaptic vesicle. Synapse. Cytoplasm, cytoskeleton. Note=Enriched at synaptic terminals where it exists in a soluble form and a synaptic vesicle-associated form. Associated with the cytoskeleton (By similarity). Found in proximal dendrites of pyramidal neurons in the cerebral cortex and hippocampus, and Purkinje cells in the cerebellum (PubMed:20085810).
Protein: Y2124_NOSS1
Sequence: MPPIGLSTSRTTHTKQTNVPKLWLVMVGVNQYQDEYLPNLNYSAIDCQGLSEALTEAATQFTQKIVNVYHDFAPQPPSLTNVRHSLRDITSHVSPIDTILFYFSGHGVVDPTTQEVFLCLVDTQKSNLQNTGLALQEILQILGKSGVQNQLVWLDACHSGGMSLRGVTLQLVELLQQSAAKSKGFYALLSCDNNQQSWEFPELGHGVFTYYLIRGLQGEAVDSQGLIYLDGLYRYVYHQTLQYIDKTNQQLRLINQQKRGKGDTQLYNEYPLQTPKRIVEGVGELILGKRLEKNAPGVYRGLGIVVEGLSNSKITLDISKLLGSTGDFAVEYLPATKTSSEDIKAAIARHWQQPQAELTLLYLRGRIEESEAGEWLRLGEDICIKRSWLKQQLRQCTSQQVIILDCPLGTASLGDWIEDLQIESHHGQCLIACASPPEAPENFAQKFLDTLTASAQGDGLSAAGAIAQLQLSLADSKTPLYVWLSGTQGIIEILTNNTHKSQRTSGLDLGVCPYMGLNAFAEADAAYFYGRETVTQQLIHHLRDNSFLAVIGASGSGKSSVVQAGLIPQLRQGKHIPNSEQWGIKTIRPGVNPLEALARKLGEWGETHLLIEGMLHQGVEGFVYWLRSLPQGVTVLVIDQFEELFTLAPTPDRELFLELLLGAVQYAGDRFKLIITLRADFIAPCLEVPALAEALQVASVLVPPKLSLDDYRRVILHPAQQVGLQVEAELVEVLLRELNQSVGDLPLLEFVLEQLWQQRTAGKLTLQSYQEQLGGIKGALERSCQGVYESLPPQLQECAKWIFLSLTQLGEGTEDTRRRIYKSDLIVKKYPAGLVEQTLNVLTNAKLVVINLEAEIEAQGKSFSPTPPNLSTPFVTVEVAHEILIRHWSTLRWWLEENRDRLRKQRQINHACQLWQQSGKQADFLLQGARLAEAEDIYIYWTDELGADVQEFIGACLAERKHQQLQAKNRLKQAQRAVVALSVLGIASVSFGGLAYWQGREAQFREIAALNSSSQANLLSHQQLAALIASLKAAQQVNHVIAVPNNLKLATVTTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDSQQAKTSQMNTLVMSACNWLQDYLNTNPNVTPNEQKLCPS
What are the official names of this protein?
Uncharacterized WD repeat-containing protein all2124.
Protein: LPTE_SALA4
Sequence: MRYLVTLLLSLAVLVTAGCGWHLRSTTQVPASMKTMILDSGDPNGPLSRAVRNQLRLNNVNLLDKDTTRKDVPSLRLGTVTISQDTASVFQDGQTAEYQMVMTVNASVLIPGHDIYPISTKVYRSFFDNPQMALAKDNEQAMIVQEMYDKAAEQLIRKLTSVRAADIQATKEEATADNETAVPASTPARVSTTLSN
What is the function of this protein?
Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.  Required for the proper assembly of LptD.  Binds LPS and may serve as the LPS recognition site at the outer membrane.
What are the official names of this protein?
LPS-assembly lipoprotein LptE.
What is the protein family that this protein belongs to?
Belongs to the LptE lipoprotein family.
What are the subcellular locations of this protein?
Cell outer membrane; Lipid-anchor.
Protein: NSF_ORYSJ
Sequence: MAGRNYHGYGGGGGGGMSMVVASTPGQELALTNCAYVSSADIRRFPNALALVGDAFVFTLRAHDAVSAGSIALNAIQRRQTKVSAGDSITVSSFAPPDDFKLALLTLELEYTKARTNRNEELDAVVLAQQLRRRFLDQVMTSGQRVPFEFCGTNYIFTVNQALLDGQENSTPLDRGFLSSDTYIIFEAAPNSGIKVVNQKEAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVNALHEITPAFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETMIGFSESSKCAQICKVFEDAYKSQFGIIILDDIERLLEYVAIGPRFSNIISQTLLVLLKRVPPKGKNLLVIGTTSEVGFLESIGMCDVFSVTYHVPKLKKEDATKVLRHLNVFDEADIDAAAEALDDMPIKKLYTLVEMAAQGPSGGSAEAVYGGEEKIDINHFFSILSDIIRY
What is the function of this protein?
Required for vesicle-mediated transport.  Catalyzes the fusion of transport vesicles within the Golgi cisternae.  Is also required for transport from the endoplasmic reticulum to the Golgi stack.  Seems to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin (By similarity).  Involved in spikelet development (PubMed:25848690).  Regulates protein storage vacuole (PSV) morphology in endosperm cells (PubMed:25848690).  Forms a quaternary complex with the two glutelin zipcode RNA-binding proteins RBP-L and RBP-P, and the membrane trafficking factor RAB5A (PubMed:32471860).  This quaternay complex carries glutelin mRNAs for active transport on endosomes to the cortical endoplasmic reticulum membrane, and enables endosome-mediated glutelin mRNA transport in endosperm cells (PubMed:32471860).
What are the official names of this protein?
Vesicle-fusing ATPase, N-ethylmaleimide-sensitive fusion protein, Vesicular-fusion protein Sec18, OsSec18.
What is the protein family that this protein belongs to?
Belongs to the AAA ATPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CH60_BACCZ
Sequence: MAKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASIVAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMGGMM
What is the function of this protein?
Together with its co-chaperonin GroES, plays an essential role in assisting protein folding.  The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.
What are the official names of this protein?
Chaperonin GroEL, 60 kDa chaperonin, Chaperonin-60, Cpn60.
What is the protein family that this protein belongs to?
Belongs to the chaperonin (HSP60) family.
What are the subcellular locations of this protein?
Cytoplasm.