PharMolix/UniProtQA huggingface dataset:
Protein: FEN1_ASHGO
Sequence: MGIKGLNSIIQQQVPSAIRPREMKQFFGRRVAIDASMSLYQFLIAVRQADGVQLASADGETTSHLMGMFYRTLRMVDHGLKPCYVFDGKPPVLKAHELDKRTERRKETEQKLAELTEQAEIMKHERRLVKVEQWHVAEAKKLLGLMGIPYVDAPGEAEAQCAELAKKGKVFAAASEDMDTLCYRTPYLLRHLTFSEARKEPIHEIDTELVLQGLGLSQEQLVDLGIMLGCDYCESIKGVGPVTALKLIKEHGSLENIVEFISSGGNAKWKVPENWPYKEARALFLQPDVLDAEGVSLKWEEPKEEELIAFMCKEKGFNEDRIKSGIQKLRKGLKGGVQGRLDSFFKVKPKTTEQLAASARKAQAAKKTNQKGKVLKRR
What is the function of this protein?
Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair.  During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.  It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation.  Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap.  Acts as a genome stabilization factor that prevents flaps from equilibrating into structures that lead to duplications and deletions.  Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity.  Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.
What are the official names of this protein?
Flap endonuclease 1, FEN-1, Flap structure-specific endonuclease 1.
What is the protein family that this protein belongs to?
Belongs to the XPG/RAD2 endonuclease family. FEN1 subfamily.
What are the subcellular locations of this protein?
Nucleus, nucleolus. Nucleus, nucleoplasm. Mitochondrion. Note=Resides mostly in the nucleoli and relocalizes to the nucleoplasm upon DNA damage.
Protein: ODD2_CAEEL
Sequence: MLPWQRQVPTSIFPQSNEQVFRMMLAQQHLQLQNFLQQRKMALLAMNPEIPMITDLKKAKFDFTHMADSIESEQKIKEESVSPKMSPTLTTAAVRPFVPYDQPWFMIPGRGRTTGRAARPKKEFICKYCDRHFTKSYNLLIHERTHTDERPYSCDVCGKAFRRQDHLRDHKYIHQKDRPFKCEICGKGFCQSRTLLVHRATHDPNRHSIGAPVVPIKSETPLPELDPRVTLILQNLTDSFNSTSMTSPQISPDR
What is the function of this protein?
May function as transcription regulator (Probable).  Required for morphogenesis and function of the digestive tract.
What are the official names of this protein?
Protein odd-skipped-related 2.
What is the protein family that this protein belongs to?
Belongs to the Odd C2H2-type zinc-finger protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PGLR_TOBAC
Sequence: MDLKFKVHFALVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAWECKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLKGKQNPPVCTASAASSS
What is the function of this protein?
May function in depolymerizing pectin during pollen development, germination, and tube growth.
What are the official names of this protein?
Polygalacturonase, PG, Pectinase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 28 family.
What are the subcellular locations of this protein?
Secreted. Secreted, cell wall.
Protein: PHI1_TOBAC
Sequence: MATSHFILKLFLVISFCNVCFASRKLTALVQEPENQLLQYHKGALLFGKISVNLIWYGKFKPSQRAIVSDFITSLSSSTPSKTDPSVAKWWKTTEKYYHLANSKKSLSLYLGKQVLVENYSLGKSLTQKQIVQLASKGEQKDAINIVLTASDVAVDGFCVNRCGTHGSSKGAIIRGKTYKFAYIWVGNSETQCAGYCAWPFHQPIYGPQSPPLVAPNNDVGVDGMVINLASLLAGTATNPFGNGYYQGEADAPLEAASACPGVYAKGAYPGYAGDLLVDKTTGASYNAHGTNGRKYLLPALYDPSTSTCSTLV
What is the function of this protein?
May be involved in the regulation of cell division.
What are the official names of this protein?
Protein PHOSPHATE-INDUCED 1.
What is the protein family that this protein belongs to?
Belongs to the EXORDIUM family.
What are the subcellular locations of this protein?
Secreted. Secreted, extracellular space. Secreted, extracellular space, apoplast.
Protein: 5HT1B_HORSE
Sequence: MEETGAQCAPPPPAGSQTGVSQVNLSAAPSHNCSTEGYVYQDSVALPWKVLLVVLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYVVTGRWTLGQVVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVLDCLVNTDHILYTVYSTVGAFYFPTLLLIALYSRIYVEARSRILKQTPNRTGKRLTRAQLMTDSPGSTSSVTSINSRAPDVPSESGSPVYVNQVKVRVSDALVEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCAS
What is the function of this protein?
G-protein coupled receptor for 5-hydroxytryptamine (serotonin).  Also functions as a receptor for various alkaloids and psychoactive substances.  Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase.  Signaling inhibits adenylate cyclase activity.  Arrestin family members inhibit signaling via G proteins and mediate activation of alternative signaling pathways.  Regulates the release of 5-hydroxytryptamine, dopamine and acetylcholine in the brain, and thereby affects neural activity, nociceptive processing, pain perception, mood and behavior.  Besides, plays a role in vasoconstriction of cerebral arteries (By similarity).
What are the official names of this protein?
5-hydroxytryptamine receptor 1B, 5-HT-1B, 5-HT1B, Serotonin receptor 1B.
What is the protein family that this protein belongs to?
Belongs to the G-protein coupled receptor 1 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: SODC_LEGPN
Sequence: MNKSGIILIGTILFSSMAIADDLTAPIYTTGPKPVAIGKVTFTQTPYGVLITPDLTNLPEGPHGFHLHKTADCGNHGMHAEGHYDPQNTNSHQGPYGNGHLGDLPVLYVTSNGKAMIPTLAPRLKLSDMHNLAVMIHANGDTYSDNPPQGGGGDRIACGVIK
What is the function of this protein?
Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
What are the official names of this protein?
Superoxide dismutase [Cu-Zn].
What is the protein family that this protein belongs to?
Belongs to the Cu-Zn superoxide dismutase family.
What are the subcellular locations of this protein?
Periplasm.
Protein: Y314_METJA
Sequence: MELYKKGYSARTIAKILGCSKSTVCYRLYKLGITPRRGLDLNPQEIIKLYQNGYTTTEIAKIMKCSHETIRRILRNNNIDIRKSSESLIIKNTKKINLNPSESLAYILGVLNGDGSVNKQESNYVIELKVTDKDFIEEFKRNLENIGFKYINEYVRKFENKKDQYVVRVRSKGFYYWYKSLNVDYYMNVIGNNEKLMISWLKGFYDSEGSVVINKKGNYVYKYVSIANTNRNLIDVCCSFLEKLGIEYSVYCEKNNRYKSGYL
What are the official names of this protein?
Uncharacterized protein MJ0314.
Protein: GATA_CHLPN
Sequence: MYRYSALELAKAVTLGELTATGVTQHFFHRIEEAEGQVGAFISLCKEQALEQAELIDKKRSRGEPLGKLAGVPVGIKDNIHVTGLKTTCASRVLENYQPPFDATVVERIKKEDGIILGKLNMDEFAMGSTTLYSAFHPTHNPWDLSRVPGGSSGGSAAAVSARFCPVALGSDTGGSIRQPAAFCGVVGFKPSYGAVSRYGLVAFASSLDQIGPLANTVEDVALMMDVFSGRDPKDATSREFFRDSFMSKLSTEVPKVIGVPRTFLEGLRDDIRENFFSSLAIFEGEGTHLVDVELDILSHAVSIYYILASAEAATNLARFDGVRYGYRSPQAHTISQLYDLSRGEGFGKEVMRRILLGNYVLSAERQNVYYKKATAVRAKIVKAFRTAFEKCEILAMPVCSSPAFEIGEILDPVTLYLQDIYTVAMNLAYLPAIAVPSGFSKEGLPLGLQIIGQQGQDQQVCQVGYSFQEHAQIKQLFSKRYAKSVVLGGQS
What is the function of this protein?
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase.  The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) (By similarity).
What are the official names of this protein?
Glutamyl-tRNA(Gln) amidotransferase subunit A, Glu-ADT subunit A.
What is the protein family that this protein belongs to?
Belongs to the amidase family. GatA subfamily.
Protein: RIMM_PASMU
Sequence: MVNMEQQRIEVVGKLGSTYGIRGWLRIYSSTEYAESIFDYQPWFLKIKGQWQPTELESWRYHNNDLIVKLKHVDDRETAQTLANIEIGVDLAVFPELEEGDYYWHDLIGCNVVNLENYAMGTVTEMMETGSNDVLVVRAKSKDAFGKQERLIPFLYEQVVKRVDLNTKTIVVDWDAGF
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MIM1_ASHGO
Sequence: MAEEILGNIAEEAHAALLASAGDEATKKSGAIRLPIEDSLDGDFGSRGTAYTDLSTTTSAGTSGQLVERTGGISFGRLLSVAGSCSINLLLPFLNGLMLGFGELLAHELSWKFSWFDKERNRGYRIYPEVRKAAELQERERQRALSRAAGPDGFL
What is the function of this protein?
Required for the assembly of the TOM (translocase of outer membrane) receptor complex, which is responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins.
What are the official names of this protein?
Mitochondrial import protein 1.
What is the protein family that this protein belongs to?
Belongs to the MIM1 family.
What are the subcellular locations of this protein?
Mitochondrion outer membrane.
Protein: RL21_PROMM
Sequence: MAEKPTAKPKAAEAKDQSDSYAIVEASGQQFLLQPNRYYDLDRLQAAVDDTVTLEKVLLIKDGKNDATVGQPYVKGASVELKVMDHRRGPKIIVYKMRPKKKTRRKNGHRQELTRVMVQSISIDGKALS
What is the function of this protein?
This protein binds to 23S rRNA in the presence of protein L20.
What are the official names of this protein?
50S ribosomal protein L21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL21 family.
Protein: ECOT_PSEF5
Sequence: MRLLPLASVTLLSVLCAQAFAAKLEDTAPYPKAEDGFTRQVIHLPKQQHEDRYKVEILAGKTLTVDCNLQRLGGKLLEKNLEGWGYPYYRLDQVSGPISTRMACPDGKTREDFVPVTGDGFVLRYNSKLPIVIYAPKDVEVRYRLWSAADKTENARQE
What is the function of this protein?
General inhibitor of family S1 serine proteases.
What are the official names of this protein?
Ecotin.
What is the protein family that this protein belongs to?
Belongs to the protease inhibitor I11 (ecotin) family.
What are the subcellular locations of this protein?
Periplasm.
Protein: NCSEA_DICDI
Sequence: MKRSIVFIYSLVILLLSVGFIDAFKISIENHIKLSDDSSYQIGTGIYDITGPGAETNMMGYAMPGQITGGIHFRQRARAFVFIDSEGNRAVYVSTDSCMIFQEVKIQVIQDLQEIFGPTLYTHDNVLLSGTHTHSGPAGFSEYALYGITALGFYKKNFDTICDGIVQAIVKAHKSVQPARMLTQQGELWNSNINRSPYAYDNNPEEEKAMYDANVDKNMTVIRIEDMSGNPFAAISFFGVHCTSMNNTNHLISGDNKGYASYLWEKHANGQSSLPGTGPFIAAFGQSNEGDVSPNTRGPTCRDGKPCDYKTSTCNGKVEECWALGPGTDGDMFESTQIIGGNQFNKALELFNNATIQVSGKIQYRHTWKPFTNVSVEAPYNSGVEGATTCRGAMGYSFAGGTTDGPGAFNFIQGDNSTTNPFWNFIGGIIAKPTPQQTACQAPKPILIDVGMVEPIPWVPDVMPLQIITLGQIVLVAVPGEFTTMSGRRLRNTVREIIGQSIENPIVLIAGLANTYSGYIATFEEFQVQRYEGASTVFGPHTLGAYQQEFANLAQSIVDGSQADPGTFPRNMSGHTPFFLPPVIVDVAPKFDDFGDIYTDVSTTTPYSINQTVTVIFYGANLRNNFMTESSFLTVDQLQSNGQWTTILNDGDWDTKLYWKMHDLGFSLITVDWTISPITQPGTYRITHSGYAKKNPFSDNLTFYQGISSNFNVQ
What is the function of this protein?
Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid at an optimal pH of 3. 0.  Has no activity toward glycosphingolipids, such as GalCer and Galbeta1-3GalNAcbeta1-4(NeuAcalpha2-3)Galbeta1-4Glcbeta1-1'Cer or sphingomyelin.
What are the official names of this protein?
Neutral ceramidase A, N-CDase A, NCDase A, Acylsphingosine deacylase 2A, N-acylsphingosine amidohydrolase 2A.
What is the protein family that this protein belongs to?
Belongs to the neutral ceramidase family.
What are the subcellular locations of this protein?
Secreted.
Protein: MSCL_BACMK
Sequence: MWNEFKKFAFKGNVIDLAVGVVIGAAFGKIVSSLVKDIITPLLGMVLGGVNFTDLKLTFGKSSIMYGNFIQTIFDFLIIAAAIFMFVKVFNKLTSKREEEEKKEELPEPTKEEEILGEIRDLLKQQNSSKDRA
What is the function of this protein?
Channel that opens in response to stretch forces in the membrane lipid bilayer.  May participate in the regulation of osmotic pressure changes within the cell.
What are the official names of this protein?
Large-conductance mechanosensitive channel.
What is the protein family that this protein belongs to?
Belongs to the MscL family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: IF3C_CYACA
Sequence: MLGGELLKYKSSKESHILINENINFPCVRVVDVTGKQLGILDTRQAVEYAKNQGVDLVLVNEISDPPVCKLIDYGKHKFIVEKRVKEGRKKQSGALVKEVKMTYKINEHDYETRLNQAFKFLKSGNKVKVTLTFKGREIQHLSLGTMLLNRLMTDLQQIAEVKRSPYQDGKTMILILTPKIVDPQ
What is the function of this protein?
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
What are the official names of this protein?
Translation initiation factor IF-3, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the IF-3 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: TRPD_CHLAD
Sequence: MNIREAIAAVVARRDLTQAEAASVMEEIMNGTATPAQIAAFLTALHIKGETDAEIAGMAAVMREKATHVYFDGPVIDTCGTGGDGAHTFNISTTAAFVAAGAGLTVAKHGNRAMSSVCGSADVLEGLGVQIELDAEGVARCLRDAGIGFMFAPKFHPAMRFAGPVRREIGIRTVFNILGPLTNPARARYQVLGVASAALAEKLANALSRLDTVHALVVHGDGGVDELTLSGPNLIFEVRAGHALRQMIVAPEDVGLERAPREALRGGDVAYNVALVRAILSGEDRGPRRDVVLLNAAAALVAGDVAPDLATGVKMARASIDSGRALERLHRMIAVSRGEA
What is the function of this protein?
Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
What are the official names of this protein?
Anthranilate phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the anthranilate phosphoribosyltransferase family.
Protein: METN2_BACLD
Sequence: MINLQNVSKIYRSKHGDVNAVQDVTLTIKKGEIFGIIGYSGAGKSSLIRLLNGLEQPTSGTVEVAGRKISEIKGKKLRKARQEISMIFQHFNLLWSRTVRDNIAFPLEIAGVSKAKRLERVAELIKLVGLEGKENAYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPQTTDSILGLLSDINERLGLTIVLITHEMHVIRKICHRVAVMENGKVVEEGDVLNVFIKPKEEMTKRFVQQVTEPVETKETLKHFLEETTSGRTIKLTFVGEAAESPLITQIIRKFDVEVNILQGKISQTQDGAYGSLFIHVDGRENEVNDVVDFIKSRQVEAEVITNV
What is the function of this protein?
Part of the ABC transporter complex MetNIQ involved in methionine import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Methionine import ATP-binding protein MetN 2.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: MOAC_SHEWM
Sequence: MSNEFTHINADGNAHMVDVTEKAVTEREARAEAFIEMAPATLEMIMSGSHHKGDVFATARIAGIQAAKKTSDLIPLCHPLMLTKVEVELEAQPEHSRVRITSLCKLSGKTGVEMEALTAASVAALTIYDMCKAVQKDMVISQTRLLEKRGGKSGHFKV
What is the function of this protein?
Catalyzes the conversion of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP).
What are the official names of this protein?
Cyclic pyranopterin monophosphate synthase, Molybdenum cofactor biosynthesis protein C.
What is the protein family that this protein belongs to?
Belongs to the MoaC family.
Protein: RS11_SHIF8
Sequence: MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
What is the function of this protein?
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA.  Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
What are the official names of this protein?
30S ribosomal protein S11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS11 family.
Protein: HIS2_THIDA
Sequence: MSDILDRLAEILEARKQASPDASYVARLYAKGTDAILKKIGEEATETVMAAKDDQAEKIIYEVADLWFHTLVLLAHKGLKPADVLEELARREGLSGLTEKANRQGGST
What are the official names of this protein?
Phosphoribosyl-ATP pyrophosphatase, PRA-PH.
What is the protein family that this protein belongs to?
Belongs to the PRA-PH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UBIC_PHOPR
Sequence: MSKFKQLYKPLLDNAQWETPLSLAIEGTAFGHWLLEPNSLSRRLQRHCDEFTVSLIEQKKIDSTMLSADERELIGDVDCLLRKVVLMGDGQPWVFARTLIPLSTLTGQESDLEQLGEMPLGFRVFTDRSARRDALEVANTGTQAQPLWARRSRLWINNKPLLVAELFLAQAPVYSKEKQC
What is the function of this protein?
Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway.
What are the official names of this protein?
Probable chorismate pyruvate-lyase, CL, CPL.
What is the protein family that this protein belongs to?
Belongs to the UbiC family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HFQ_CHESB
Sequence: MAERSQNLQDLFLNTVRKSKNPLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAISTIMPSQPVQLFEAEEGSREG
What is the function of this protein?
RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations.  Also binds with high specificity to tRNAs.
What are the official names of this protein?
RNA-binding protein Hfq.
What is the protein family that this protein belongs to?
Belongs to the Hfq family.
Protein: GUAC_KLEP7
Sequence: MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELEREFTFKHSGLTWSGVPIIAANMDTVGTFSMAKALATFGILTAVHKHYTAEEWLAFTQGASADVLKHVMVSTGTSDADFEKTQQILSQNPQLNFVCIDVANGYSEHFVQFVAKAREAWPQKTIIAGNVVTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIISDGGCTMPGDVAKAFGGGADFVMLGGMLAGHEESGGTIVEENGEKFMLFYGMSSESAMTRHVGGVAKYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRVFNSL
What is the function of this protein?
Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP.  It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
What are the official names of this protein?
GMP reductase, Guanosine 5'-monophosphate oxidoreductase, Guanosine monophosphate reductase.
What is the protein family that this protein belongs to?
Belongs to the IMPDH/GMPR family. GuaC type 1 subfamily.
Protein: SUCC_CAMHC
Sequence: MNIHEYQAKELCREFGINVSNGALALSADEAVEVAKKLGGNVWAVKAQIHAGGRGLGGGVKIAKNLDEVKKYANQILGMTLVTKQTGPKGKLVRKIYIEQGCNIKKEFYVSLTFNRAKEQIGLIASASGGMGIEEVDKNLIKTLNIDPQIGLKAFHAYEVGDFLGFDKDLNNKFYKFLNGLYKLYIATDANLVEINPMVLTAEDEFFALDAKMGFDDAALFRHENIAAMRDLDEEESSEVEAKQYGLSYVKLDGDIGCMVNGAGLAMGTMDTITYCGGKSANFLDVGGGASAETVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIAKGILEATKLTKVEIPVVVRLDGTNAKEAIELLKEANIENIYSAHDLEEGAKLAVKLVNGEK
What is the function of this protein?
Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA.  The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
What are the official names of this protein?
Succinate--CoA ligase [ADP-forming] subunit beta, Succinyl-CoA synthetase subunit beta, SCS-beta.
What is the protein family that this protein belongs to?
Belongs to the succinate/malate CoA ligase beta subunit family.
Protein: RPOB_BRASB
Sequence: MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPTGGRPDEGLQAVFRSVFPISDFSGTSMLEFVRYEFEPPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKSVKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMFALGLDGEQILSTFYKKLIYKRIKEGWRVPFDANRFRGYSTVNDLIDADTGKVVLEAGKKLTVRTARQLQEKGLKALRMSDEELLGNYIAEDLVNPKTGEIYAEAGEEITDKLFKVLNEQGYKDLPLLDIDHVNVGPYIRNTLSADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLELDAPDTQRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPYRKVRDGRVTDEVVYLSAMEEGRYRVAQANVPLDAKGRFTEDLVVCRHAGEVVPMTPDKVDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSGAAIAARRSGVVDQIDATRVVIRATEDLDPTKSGVDIYRLMKFQRSNQSTCINQRPLVKVGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREEIERLAKDRDDEQAILDRNVYSRLADMLDGRQGISGPKGFKKDTKITRAVLDEYPKSQWWLFASANDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACAGLGKRIAQTVDAYLSKQDVKPLKETLKRIYGEDETIKSLNDNELLELGHNLSRGVPIATPVFDGAKEADIEEMLKLAGMDASGQSTVYDGRTGDPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKLGPAPTSEAAE
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta, RNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta chain family.
Protein: SBT54_ARATH
Sequence: MSMTRRYSSTQYSNKMSLQSLSSLLLLVTLFFSPAFALKKSYIVYLGSHAHLPQISSAHLDGVAHSHRTFLASFVGSHENAKEAIFYSYKRHINGFAAILDENEAAEIAKHPDVVSVFPNKGRKLHTTHSWNFMLLAKNGVVHKSSLWNKAGYGEDTIIANLDTGVWPESKSFSDEGYGAVPARWKGRCHKDVPCNRKLIGARYFNKGYLAYTGLPSNASYETCRDHDGHGSHTLSTAAGNFVPGANVFGIGNGTASGGSPKARVAAYKVCWPPVDGAECFDADILAAIEAAIEDGVDVLSASVGGDAGDYMSDGIAIGSFHAVKNGVTVVCSAGNSGPKSGTVSNVAPWVITVGASSMDREFQAFVELKNGQSFKGTSLSKPLPEEKMYSLISAADANVANGNVTDALLCKKGSLDPKKVKGKILVCLRGDNARVDKGMQAAAAGAAGMVLCNDKASGNEIISDAHVLPASQIDYKDGETLFSYLSSTKDPKGYIKAPTATLNTKPAPFMASFSSRGPNTITPGILKPDITAPGVNIIAAFTEATGPTDLDSDNRRTPFNTESGTSMSCPHISGVVGLLKTLHPHWSPAAIRSAIMTTSRTRNNRRKPMVDESFKKANPFSYGSGHVQPNKAAHPGLVYDLTTGDYLDFLCAVGYNNTVVQLFAEDPQYTCRQGANLLDFNYPSITVPNLTGSITVTRKLKNVGPPATYNARFREPLGVRVSVEPKQLTFNKTGEVKIFQMTLRPLPVTPSGYVFGELTWTDSHHYVRSPIVVQLSS
What is the function of this protein?
Serine protease.  Has a substrate preference for the hydrophobic residues Phe and Ala and the basic residue Asp in the P1 position, and for Asp, Leu or Ala in the P1' position (By similarity).  Interferes with CLAVATA 3 (CLV3) signaling, but does not cleave CLV3.
What are the official names of this protein?
Subtilisin-like protease SBT5.4, Subtilase subfamily 5 member 4, AtSBT5.4.
What is the protein family that this protein belongs to?
Belongs to the peptidase S8 family.
What are the subcellular locations of this protein?
Endoplasmic reticulum. Cell membrane.
Protein: RL17_STAAB
Sequence: MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIELV
What are the official names of this protein?
50S ribosomal protein L17.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL17 family.
Protein: ARGC_STRGC
Sequence: MRISIVGITGYSGMELLRILLQHPQVEVVSLHASQDREAPVSELYPHLKGICDLKIEAFDSQEIMRRADLVFFATSSGVAKDLSKDFVEVGFPVIDLSGDHRLPGNIYKKWYQKEPAEDHVQKKFIYGLSEFADVRGERFIANPGCYATATELALIPLLQAQAIELDSIIVDAKSGLTGAGKNPAASSHFVHVHDNYVTYKLNQHQHIPEIVQQLQRFDESLQQIQFSTSLIPLNRGIVATVYSKLKEPLTQEELTAIYQECYQEKPFVRIQATLPSLHQVVGTNYTDIGFDYNHVTNILTVVAVLDNLIKGAAGQAVQNMNLMLGFPETDGLLSQPSYV
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
What are the official names of this protein?
N-acetyl-gamma-glutamyl-phosphate reductase, AGPR, N-acetyl-glutamate semialdehyde dehydrogenase, NAGSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: IF1_STAAR
Sequence: MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLTRGRITYRYK
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds.  Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).  Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
What are the official names of this protein?
Translation initiation factor IF-1.
What is the protein family that this protein belongs to?
Belongs to the IF-1 family.
What are the subcellular locations of this protein?
Cytoplasm.