PharMolix/UniProtQA huggingface dataset:
Protein: EFG_DESVH
Sequence: MARVVPIDMQRNIGIMAHIDAGKTTTTERILFYTGVSHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWREHRVNIIDTPGHVDFTIEVERSLRVLDGAVCVFDAVAGVEPQSETVWRQADRYGVPRICFVNKMDRIGASFERCVGMIRDRLRAKPIPVQLPIGAEDRFEGVIDLITGKAVTFDKASKGQTFNVGDVPAEYRDQYDAMRFEMIEAVAEEDEALMEKYLGGEELTVEEIISCVRKATIARNIVPVLCGSAFRNMGVQPLLDAVVDFLPSPVDIEQMKGVNPDKEEETIVCPCDDKEPLAALVFKLFSDPYIGHLSFCRIYSGFIESGMTVLNANTGKRERVGRLLKMHANKREEIKWAGAGDIVALVGLKLASTGDTICDEKRPVVLESLDIPEPVIEVAIEPKTKADRDALSAALAKLAKEDPSFRVKGDDETNQTLIAGMGELHLEIIVDRLTREFSVNANVGKPQVAYRETITKPGKADTKHVKQSGGRGQYGHAVIEIEPNPGKGYEFVNSITGGVIPKEYIAPIDKGIQDALKSGILSGFPTVDIKVNLVFGSYHDVDSSEQAFYVTGSMAIKEAIAKSGPVLLEPIMDVEVVTPDEYLGDVMGDLNGRRGKVQSMEARVGAQSIRAQVPLSEMFGYATDLRSKTQGRATFSMQFHHYERVPAALAEELVKKKG
What is the function of this protein?
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation.  During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively.  Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
What are the official names of this protein?
Elongation factor G, EF-G.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y272_METM6
Sequence: MKFRKGRPKIPRLISEEPQFKLFKPAGTPGIELESEVLTFEELESLRLVDYLNQPHEEAADAMGISRRVFWNILKSARKKVADALINGKMIDIGGGYYKIRECNYEDECQRGRNCRYGVSNCLTLKKDSE
What are the official names of this protein?
UPF0251 protein MmarC6_0272.
What is the protein family that this protein belongs to?
Belongs to the UPF0251 family.
Protein: SYY_METBU
Sequence: MENMDLIKRNVQEIVTEEELTKLLETKKHPSAYTGYEPSGKIHMGHVLTVNKLLDLQKAGFEITVLLADVHAYLNQKGTMDEVRKTADYNKKCFLALGLDPEMTNFVYGSDFQLSPEYMLNVLKLTQATSLNRAKRSMDEVGRKMEDPKVSQMVYPIMQAVDIALLGVDVAVGGIDQRKIHMLAREGLPGLGFKAPLCIHTPILLGLDGTKMSSSNENYISVDDDEAALKKKFKKAFCPAEDIENNPVLELFKYHITPRYDEMVFERPEKFGGDLVCKSYAELEKVFADGSLHPMDLKNGAAKYLNEILEPVRSVLE
What is the function of this protein?
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).
What are the official names of this protein?
Tyrosine--tRNA ligase, Tyrosyl-tRNA synthetase, TyrRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RLMD_PSEAE
Sequence: MARNKGGLRFQPSGGARGPAIPVGKKQRLTIERLAHDGRGIAHEAGMTWFVSGGLPGEELEARVLGARSKVVDARSERLFSSSDLRRREPCTVAGRCGGCTLQHLEHGEQLALKQRTLQEQLQRFAGIEPEEWAAPLVGPEFGYRRRARIAVRWDARARRLDVGFRASASQEIVAFDECLVLVPPLQTIARALPALLQDFRKPESIGHVELFHGTASALLLRHTTALVDEDRQRLAAFCSAHQAQLWLQGAEQPLPVEPAAELGYSLGDWQLTLAYRPGDFVQVNAPVNESMIRQALDWLAPTADERVLDLFCGLGNFSLPLARRVARVVGVEGVAAMVERAGANALANGLGNAHFFQADLSKALAEAPWAEQGFTAVLLDPPRDGAFEAVREMSSLGARRVVYVSCNPATLARDAGEMARQGYRLKRAGILDMFPQTAHVEAMALFEAG
What is the function of this protein?
Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA.
What are the official names of this protein?
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, 23S rRNA(m5U1939)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
Protein: VATD_STRP4
Sequence: MVRLNVKPTRMELNNLKERLTTAERGHKLLKDKRDELMRRFISLIRENNQLRKEVESYLIDNLKSFAVAKSLKNSQMVEELFSIPSKEIELFVEKENIMSVTVPRMHMNITSQNENSEYSYLSSNSEMDDVFATMNSLIYKLLRLAEVEKTCQLMADEIEKTRRRVNGLEYSIIPNLSETIHYIELKLEEAERANLVRIMKVK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
V-type ATP synthase subunit D, V-ATPase subunit D.
What is the protein family that this protein belongs to?
Belongs to the V-ATPase D subunit family.
Protein: LDH1_STAAC
Sequence: MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEIPLNDEEQSKFAHSAKTLKDIMAEAEELK
What is the function of this protein?
Catalyzes the conversion of lactate to pyruvate (Potential).  Appears to be the primary factor that allows S. aureus growth during nitrosative stress in both aerobically and anaerobically cultured cells (PubMed:18356528).
What are the official names of this protein?
L-lactate dehydrogenase 1, L-LDH 1.
What is the protein family that this protein belongs to?
Belongs to the LDH/MDH superfamily. LDH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TRPC_STRZP
Sequence: MSQEFLARILEQKAREVEQMKLEQIQPLRQTYRLAEFLKNHQDRLQVIAEVKKASPSLGDINLDVDIVQQAQTYEENGAVMISVLTDEVFFKGHLDYLREISSQVEIPTLNKDFIIDEKQIIRARNAGATVILLIVAALSEERLKELYDYATELGLEVLVETHNLAELEVAHRLGAEIIGVNNRNLTTFEVDLQTSVDLAPYFEEGRYYISESAIFTGQDAERLAPYFNGILVGTALMQAENVAQRIKELQIDKG
What are the official names of this protein?
Indole-3-glycerol phosphate synthase, IGPS.
What is the protein family that this protein belongs to?
Belongs to the TrpC family.
Protein: RL7_LACE2
Sequence: MTTQEIIEVIKGLSVLELNDLVKACEEEFGVSAAAGVVVAAAGAGAAAAEEKTEFDVELTEAGDQKVKVIKVVREITGLGLKEAKDVVDGAPKVVKEQASKEEAEEIKKKLEEVGAKVTLK
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.  Is thus essential for accurate translation.
What are the official names of this protein?
50S ribosomal protein L7/L12.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL12 family.
Protein: RNH2_GRABC
Sequence: MQGAERGRMQMPDDRLEREAGGLVAGVDEVGRGPLAGPVVAAAVLLPASGFPAHLAGLIDDSKKLDAAARDRAFAALLAEPGITIGIGAASVTEIGRLNILHASMLAMRRAVERLPTIPDLALVDGNRAPALPCAARCVVGGDAKCLSIAAASIIAKVVRDRAMARLARRYPVYGWERNAGYPTPAHRAGLTEFGPTPHHRTAFGLVRQLLAMRMEAVV
What is the function of this protein?
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
What are the official names of this protein?
Ribonuclease HII, RNase HII.
What is the protein family that this protein belongs to?
Belongs to the RNase HII family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GP40_BPSP1
Sequence: MHIYTYWGLKYVPSNSTMVAKEGDLILLGNEVHKVVKVLHRFRNITDLQITNWKGTETRYNLHVTEYKVLVPYDTHKEENEAMSDSLITHNGKDYVLCKIPARVGDLIRTEDKRVWEVLQKSKDGLVLYNEEKGEQRSAVYSEIGPYHVLVPRDTDTHTPTREELAAVIMNKAFTRTETQDSQEDTGTHKGLGLTGTDLYHSLRDLDAKVQSGYYTATENEEDVKSEIEATKKHMKAVKESGKTVNDYRKEENTKRCKLKALTNKFNRLFLKSVIDTDSLQVGKAYLIGGRDMKNVHGLYTGTTFDQQHANFLIVETDRMHRTLTVSAEQLFAEERHIVDIEKRVEQTED
What are the official names of this protein?
Gene 40 protein.
Protein: FABA_MARMS
Sequence: MTTASSFEKDELLKCGHGEMFGAGNAQLPVGNMLMMDRITHISTEGGVYGKGEIIAELDINPDLWFFECHFPGDPVMPGCLGLDAMWQLVGFFLGWKGNKGRGRALGSGEVKFTGQILPTAKKVTFHINLKRVIERKLVMGIADGSVKVDGREIYTAKDLRVGLFTSTDNF
What is the function of this protein?
Necessary for the introduction of cis unsaturation into fatty acids.  Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP.  Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
What are the official names of this protein?
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA, Beta-hydroxydecanoyl thioester dehydrase, Trans-2-decenoyl-[acyl-carrier-protein] isomerase.
What is the protein family that this protein belongs to?
Belongs to the thioester dehydratase family. FabA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DXS_SULDN
Sequence: MNIKASRIKELETLCKNIREEILRVVSKNGGHLSSTLGATEIIVAMHEVFDSKKDPFIFDVSHQSYAHKLLTGRWDKFDTLREFNGLCGYTKPSESEHDYFVAGHSSTSISLGVGAAKAIALKGEQNSRIPVIMIGDGSMTAGMVYEALNELGERKYPMVIILNDNEMSISKPIGAISRILSSAMASPFYQNFKKHTENFVDNFGDGARYIAKRMEESLKLITPGIMFEEMGIDYIGPVDGHNIASLIEILQKAKELKKPVIVHAQTLKGKGYEIAEGKDEKWHGVGPFDLDSGAASKKSSAKSATQIYAEALLHLAKNNDKIVGATAAMPSGTGLSELIELYPNRFWDVAIAEQHAVTSMAALAKEGFKPFCTIYSTFLQRGYDQVIHDTCLMNLPVVFALDRAGIVGEDGETHQGVFDVSFLRAIPNMTLFAPRDEKSFHQAMAFAAQYQFPCSLRYPRGSFTQTSLPESSPFELAKSQLLQSNKGDVLFIGYGNGVGRAYETSKLLEEKISILDLRFIKPLDKEMLRDMATKHNKWFIFSDSAKMGGVGSAILEFFADEKILHVELESFEYEDSFITHGKTKDVEESLGLLPAQLAQKVKALI
What is the function of this protein?
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).
What are the official names of this protein?
1-deoxy-D-xylulose-5-phosphate synthase, 1-deoxyxylulose-5-phosphate synthase, DXP synthase, DXPS.
What is the protein family that this protein belongs to?
Belongs to the transketolase family. DXPS subfamily.
Protein: PTQB_ECOLI
Sequence: MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN
What is the function of this protein?
The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane.  The enzyme II ChbABC PTS system is involved in the transport of the chitin disaccharide N,N'-diacetylchitobiose (GlcNAc2) (PubMed:10913117).  Also able to use N,N',N''-triacetyl chitotriose (GlcNAc3) (PubMed:10913117, PubMed:10913119).
What are the official names of this protein?
PTS system N,N'-diacetylchitobiose-specific EIIB component, EIIB-Chb, IVcel, N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RNB_PHOLL
Sequence: MFQNNPLLAQLKQQLHSQTLRVEGLVKGTEKGFGFLEVDGQKSYFIPPPHMKKVMHGDRVTAAIHTDKEREIAEPETLIEPFLNRFVGRIQKKENDNRLWITPDHPLLKDAIPCRPTNQVTHPFQHGDWAVAEMRHHPLKGSRGFHAEITGYITESDNHYAPWWVTLTRHNLERDAPAMTADCQMNDGDLERIDLTSLDFVTIDSATTEDMDDALHIAKQDDGSLKLSIAIADPTAYIAAGSELDQIAHQRAFTNYLPGFNIPMLPRDLSENLCSLRPNARRPALVCQVSILEDGQLGDDIAFFSTWVESKAKLVYDEVSDWLEKTGTWEPASEAIKTQITLLKEMSDRRNQWRHQNALIFKDRPDYRFILDENGYVLDIVVEQRRTANRIVEEAMITSNLCAAKILRDKLGFGIYNVHMGFEPLQIEQVVELLQENDIDAKTEELLTLDGFCKLRRELDKKPTQFLDSRIRRFQTFAEIKPEPGPHFGLGFDAYATWTSPIRKYSDMINHRLLKAIIQKTDVEQPSEETCLQLAERRRLNRMAERDVGDWLYARFLQPHAGTEQRFTAEIIDITRGGLRVRLADNGAVAFIPAPFLHAVRDELQCSQETGTVIIKGEVAYQLNDIIDVRIDEVRMETRNIVARPTA
What is the function of this protein?
Involved in mRNA degradation.  Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.
What are the official names of this protein?
Exoribonuclease 2, Exoribonuclease II, RNase II, Ribonuclease II.
What is the protein family that this protein belongs to?
Belongs to the RNR ribonuclease family. RNase II subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYQ_ECOLU
Sequence: MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE
What are the official names of this protein?
Glutamine--tRNA ligase, Glutaminyl-tRNA synthetase, GlnRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SCAM1_PIG
Sequence: MSDFDSNPFADPDLNNPFKDPSVTQVTRNVPPGLDEYNPFSDSRTPPPGNVKMPNVPSTQPAIMKPTEEHPAYTQIAKEHALAQAELLKRQEELERKAAELDRREREMQNLSQHGRKNNWPPLPGNFPVGPCFYQDFSVDIPVEFQKTVKIMYYLWMFHAVTLFLNIFGCLAWFCVDPSRGVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHVLQAAGFHNWGNCGWISSLTGLNQSIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTGASFEKAQQEFATGVMSNKTVQTAAANAASTAATSAAQNAFKGNQI
What is the function of this protein?
Functions in post-Golgi recycling pathways.  Acts as a recycling carrier to the cell surface.
What are the official names of this protein?
Secretory carrier-associated membrane protein 1, Secretory carrier membrane protein 1.
What is the protein family that this protein belongs to?
Belongs to the SCAMP family.
What are the subcellular locations of this protein?
Golgi apparatus, trans-Golgi network membrane; Multi-pass membrane protein. Recycling endosome membrane; Multi-pass membrane protein.
Protein: MATK_EQUAR
Sequence: MKITDKKLLLFENISKKVTYQQRFLYPLLFHKEFYVVTSDSFIDKSNMNLSKEFVLNDRYSFLVIRRLINRIRNLNNSKKFIQTSLSDKSICSKLDFYLLKALNMVLETFLLIQSEQTKKRVNWKSYKSIFSTCSFVEEKFIFSNQILDLKIPHFIHPESFIRILRQQIKDASFLHLTRFFVHEYKERSKNEKLIYSFNKRNKFVTFSWNFFYIFELEFFLTSLLTRFINNLVLSNLFDQINLLEKINNNNKSQFFLSEKRIYNQNSCIHYVRYQNHCIMASEGFYFHDTNWIYYILNIWQFFMHLWIQPFRFSTKHFQKQSFFFLGYQFGRESKLLKVRSISLDKSPTIYSRLKKNLLKTQIVYPIDFLAKEGFCDISGYPISRSTWTTSTDEEILLNFNKIWKSFYFYYGGLIKKDILYRIKYILRFSCAKTLARKHKSTTRVVWKKIVSDLSLSSSLRRKKNFHFVFFQGSHG
What is the function of this protein?
Usually encoded in the trnK tRNA gene intron.  Probably assists in splicing its own and other chloroplast group II introns.
What are the official names of this protein?
Maturase K, Intron maturase.
What is the protein family that this protein belongs to?
Belongs to the intron maturase 2 family. MatK subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: UVRB_CYAP4
Sequence: MTGFQIKAPFEPTGDQPRAIAQLTASLQAEHRFQTLLGATGTGKTHTIARVIEKIGKPTLVLAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYIPVTDTYIEKTAAINEEIDMLRHSATRSLFERKDVIVVASISCIYGLGIPSEYLNASVPLQVGIEVDQRQLLRDLTTIQYSRNDLDLGRGRFRVKGDVLEIGPAYEDRIVRVEFFGDEIDAIRYVDPVTGTTLQSLDNLRIYPARHFVTPQERLEIACADIAAELKDRLTELEAQNKLLEAQRLDQRTRYDLEMLREVGYCNGVENYSRHLAGRSPGEPPETLIDYFPKDWLLVVDESHVTVPQIRGMYNGDQSRKRVLIDHGFRLPSAADNRPLKSEEFWQKVTQCIFVSATPGDWELDISEDRIIEQIIRPTGVVDPEIFVRPTTGQVDDLLGEVRDRIERRERVLITTLTKRMAEDLTEYFQDRGVRVRYLHSEIGAIERIEILEDLRKGTFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYADNLTDSMAKAISETERRRAIQTAYNQKHGITPQPIVKKASNAILAFLEVSRRLNAQELDTAYEQADELPLEDIPELITQLEAQMKEAAKKLEFEEAAKYRDRIKQLRDKLLGR
What is the function of this protein?
The UvrABC repair system catalyzes the recognition and processing of DNA lesions.  A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities.  Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer.  DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands.  Then UvrB probes one DNA strand for the presence of a lesion.  If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed.  This complex is subsequently bound by UvrC and the second UvrB is released.  If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.
What are the official names of this protein?
UvrABC system protein B, Protein UvrB, Excinuclease ABC subunit B.
What is the protein family that this protein belongs to?
Belongs to the UvrB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ARNC_ECOBW
Sequence: MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE
What is the function of this protein?
Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate.  The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
What are the official names of this protein?
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, Undecaprenyl-phosphate Ara4FN transferase, Ara4FN transferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 2 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: THIQ_BRUAB
Sequence: MTASADIRLSDVRFSYGETAMHFDVTITGGEIAAIVGPSGSGKSTFLNLIAGFETPQSGIISINGVDVTHLPLADRPVSMVFQENNLFAHLTVEQNVDLGRSPNLRLNEEDRKAVASALARVGLQGKEKRKPEALSGGERQRVAIARVLVRERPVLLLDEAFASLGPALRHQMLDLVNKLRRETGMTVLMVTHTPEDALHLDALLIFLDNGKIAAQGPATEMLSRAGPEALRHYIGEMRSF
What is the function of this protein?
Part of the ABC transporter complex ThiBPQ involved in thiamine import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Thiamine import ATP-binding protein ThiQ.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RBFA_SHEFN
Sequence: MAKEFSRTRRIAQQLQQELAMVLQRDMKDPRIGFVTVNDVDVSRDLSYAKVYVTFFEEDTELVQQKIDALTVAAPYVRTLVAGRMKLRVMPELRFIYDSSLVEGMRMSNLVTQVINKDKAKQQQFTPDTPDNSESVDGEKEQD
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes).  Required for efficient processing of 16S rRNA.  May interact with the 5'-terminal helix region of 16S rRNA.
What are the official names of this protein?
Ribosome-binding factor A.
What is the protein family that this protein belongs to?
Belongs to the RbfA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ULAF_SHISS
Sequence: MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDMSGKVVEGEYRPSSDTATYLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK
What is the function of this protein?
Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate.  Is involved in the anaerobic L-ascorbate utilization.
What are the official names of this protein?
L-ribulose-5-phosphate 4-epimerase UlaF, L-ascorbate utilization protein F, Phosphoribulose isomerase.
What is the protein family that this protein belongs to?
Belongs to the aldolase class II family. AraD/FucA subfamily.
Protein: Y3581_VIBC1
Sequence: MSEAVWHDGEDVVLRLYIQPKASRDKIVGLHGEELKIAITAPPVDGKANAHLTKFLAKQFKVAKGLVHIEKGELGRHKQIRIESPVQIPTEIKAII
What are the official names of this protein?
UPF0235 protein VIBHAR_03581.
What is the protein family that this protein belongs to?
Belongs to the UPF0235 family.
Protein: YIDD_SHEAM
Sequence: MAQTQSPFQWLATKLIRGYQIFISPILGPKCRFQPTCSHYAIEAIQLHGVIKGSWFAAKRILKCHPLHPGGNDPVPPKKDRCNK
What is the function of this protein?
Could be involved in insertion of integral membrane proteins into the membrane.
What are the official names of this protein?
Putative membrane protein insertion efficiency factor.
What is the protein family that this protein belongs to?
Belongs to the UPF0161 family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: RR4_ALOVE
Sequence: RFKKIRRLGALPGLTSKRPRSGIDLKNQLRSGKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITTKDKERSKVLIQNYIASSPHAELPNHLIIDPLQYKGLVNQIIDSKWIGLKIN
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S4, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: Y491_BUCBP
Sequence: MIINFKNHFLIAMPGLKDPLFKNSVIYMCKHDNNGAMGIIINKKIKNLTIQKILHQLKINIKSSNTLDFKNPVIIGGPILEDRGFILHTFKKKFTTSTHISNDLSITTSRDILEYIANLNNPKNILMALGHCIWKQHQLEQEIAKNIWLTTPADIDIIFNTPISEKWKKSMYSIGIMNILQLTSEIGHA
What are the official names of this protein?
UPF0301 protein bbp_491.
What is the protein family that this protein belongs to?
Belongs to the UPF0301 (AlgH) family.
Protein: RS6_CHLP8
Sequence: MNKLKQYECTVIIDGGLQDDAIAAAMELVKKTITDQGSVINNVLEVGRRKMAYLIGKSSVGYYAHIEFDAAPSAIAEIERVFRYEENILRFLIIQLSSPLLEMRKRVEKYSVMLGSPEDQAEPESESTAKS
What is the function of this protein?
Binds together with S18 to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S6.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS6 family.
Protein: FCUA_YEREN
Sequence: MNQTISSRAPQKRLAPRLLCVMIGAALGTLSASSWAAAATDSTAENAKKTSATAATAKAEDSKTNDTITVVGAQETFRAGGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNVIGYTSKMIEDQQANSIADVVKNDASVQNVRGYGNPSQNYRIRGYNLDGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTVDYGSASQVGGALDVGRRYGDDDQFGVRVNVLHREGESAIHDQKERTTAVSTGLDYRGDRARTSLDVGYQKQTIHHMRTDVAIGGATVIPEPPSSTLNYGQSWVYTDMETTFGMLRSEYDVSQNWTVYGSVGASRNEETGQYGAPMLTNNNGDATISRLYVPYVADSVAGLGGIRGHFDTGPITHKVNLGYAANYRTTKSAWNMSGQEDTNIYNPGVIGFPQTVMGSDSQDPQLTSQVRASGLSLSDTLSMMDDKVSLMLGVRRQEVTIRNFDSGVPNSAGSLDAMKVTPIYGIMVKPWEKVSLYANHIEALGPGKSAPYQYNGKPVVNAGQIPGIIHSKQNEIGVKFDNQRYGGTLALFEITRPTGMVDPATNVYGFYGEQRNRGIELNVFGEPVFGTRLLASATWLDPKLTKAADSANNGNDAVGVANYQLVFGGEYDIPVVEGLTATGTVVRSGSQYANEANTLKLKPWTRLDLGVRYTMPMKDTSLTWRANIENVTNERYWESVEDSGTYIYQGDPRALKLSVSMDF
What is the function of this protein?
Receptor for the hydroxamate siderophore, ferrichrome.  Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate.
What are the official names of this protein?
Ferrichrome receptor FcuA.
What is the protein family that this protein belongs to?
Belongs to the TonB-dependent receptor family.
What are the subcellular locations of this protein?
Cell outer membrane.
Protein: RIPK_TRIKI
Sequence: DVSFSLSGGGTASYEK
What are the official names of this protein?
Ribosome-inactivating protein trichokirin, rRNA N-glycosidase.
What is the protein family that this protein belongs to?
Belongs to the ribosome-inactivating protein family. Type 1 RIP subfamily.
Protein: Y1928_PASMU
Sequence: MPQAKLKDLLEFPCAFTFKVVGANRADLIDDVVVVVQKYAKGDYNPRQQLSSKGTYNSVSIDIIAEHIEQVEVLYVELAKIDGVRMVL
What are the official names of this protein?
UPF0250 protein PM1928.
What is the protein family that this protein belongs to?
Belongs to the UPF0250 family.
Protein: CSM3_KLULA
Sequence: MSIDDDMNDLSAFQGNATEDGNMRLDFELDPTVNGLDPSMTSTTDGQDPTLISTNTRKPRVKLTAEKLLSTKGLPYVMEHAPKSCRISKHKTAYDNLTNFLQFYQLWAHNLYPKAKFKDFTSLCESLGKTDKELREYRMNLVRKDMGILLGDDIPNVPDMQMHDTGVLPAHQGRNSLFVTDESTSATDRGNAQYGYEATKIISLDKDKNQNNDGNYDDDDDDDDDDDVLYSSHHQRHTNEMLSTTDTNIRQHTQNGYALPNAEELDELSKITTVASTTNNGNDIASDEEMAMMRDMDTF
What is the function of this protein?
Forms a fork protection complex (FPC) with TOF1 and which is required for chromosome segregation during meiosis and DNA damage repair.  FPC coordinates leading and lagging strand synthesis and moves with the replication fork.  FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity).
What are the official names of this protein?
Chromosome segregation in meiosis protein 3.
What is the protein family that this protein belongs to?
Belongs to the CSM3 family.
What are the subcellular locations of this protein?
Nucleus.