PharMolix/UniProtQA huggingface dataset:
Protein: SRSF3_MOUSE
Sequence: MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRSNERK
What is the function of this protein?
Splicing factor that specifically promotes exon-inclusion during alternative splicing.  Interaction with YTHDC1, a RNA-binding protein that recognizes and binds N6-methyladenosine (m6A)-containing RNAs, promotes recruitment of SRSF3 to its mRNA-binding elements adjacent to m6A sites, leading to exon-inclusion during alternative splicing.  Also functions as export adapter involved in mRNA nuclear export.  Binds mRNA which is thought to be transferred to the NXF1-NXT1 heterodimer for export (TAP/NXF1 pathway); enhances NXF1-NXT1 RNA-binding activity.  Involved in nuclear export of m6A-containing mRNAs via interaction with YTHDC1: interaction with YTHDC1 facilitates m6A-containing mRNA-binding to both SRSF3 and NXF1, promoting mRNA nuclear export.  RNA-binding is semi-sequence specific.
What are the official names of this protein?
Serine/arginine-rich splicing factor 3, Pre-mRNA-splicing factor SRP20, Protein X16, Splicing factor, arginine/serine-rich 3.
What is the protein family that this protein belongs to?
Belongs to the splicing factor SR family.
What are the subcellular locations of this protein?
Nucleus. Nucleus speckle. Cytoplasm. Note=Recruited to nuclear speckles following interaction with YTHDC1.
Protein: ARNC_SHESH
Sequence: MKHNQNIDFVSIVIPVYNEEASLPELLSRTLAAADSMGKHYELVLIDDGSRDNSANIIEAAAAEPDSHVVGIILNRNYGQHNAIMAGFEHVRGDLIITLDADLQNPPEEIPNLVAKAEEGYDSVGTVRRHRQDSALRRYPSKLINKLVKRSTGVEMNDYGCMLRAYRRHVVKAMLECHERSTFIPILANGFARHTAEIDVHHSERSQGESKYGFMNLINLMFDLLTSMTTAPLRMLSIVGGGIASFGILFGLFLILLRLIYGAEWGVDGVFPLFSILFIFIGAQFVGLGLLGEYIGRIYSDVRARPRYYVQDILVGEATKGARISDENKNN
What is the function of this protein?
Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate.  The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
What are the official names of this protein?
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, Undecaprenyl-phosphate Ara4FN transferase, Ara4FN transferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 2 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: NFUA_AERHH
Sequence: MISISDTAQAHFRKLLEKQPDGTNIRVFVVNPGTQNAECGVSYCPPDAVDPEDQHLPFSGFDCLVDPLSAPFLVDATIDFVTDQMGSQLTLKAPNAKMRKVADDAPLIDRIEYVLMSEVNPMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLKEGIEKQLLEKFPGELNGVKDATEHQRGDHSYY
What is the function of this protein?
Involved in iron-sulfur cluster biogenesis.  Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins.  Could also act as a scaffold/chaperone for damaged Fe/S proteins.
What are the official names of this protein?
Fe/S biogenesis protein NfuA.
What is the protein family that this protein belongs to?
Belongs to the NfuA family.
Protein: SET9_NEUCR
Sequence: MTKPQGTGGKKKNQLTLAQLAAYDDILTDALVDHAYYWTTIPKNRTSYHPSRGIKEEEITKIIQNHLIVDPDIATAEEKLLATDGLKRFCNTLKTPREQNDFKAHLRRYMSIYLPDCPFEVNATNRYTIVTYEASITARRFIQRNETIKYLAGIQVVITPEEELEMSLRKKDFSLIVSSRSKSTSLFMGPARFANHDCNANARLITRGQAGIEIIACRNIEVGEEITVTYSESYFGENNCDCLCATCESNLRNGWRPVDGEAAVQKSIEDEQPTESSTPYSFRRKRRYGSTALQASRTPSVTPDMRPRVLRKSQSQMMLGERTSTTDSAAQGAGADGQSRKRALEMGTPPFTPTKKQKTTQYPVVPIALSTAPSRGSSDNETSKSPLSFSTTNDNVTDATSQGSESPGPIILSPEPTPIKQAIGLLKQEEGVNEVAVQQVPEAFTPPPSQPTEEEPPMVRPAFERLAARDRMSIANLISGPSSPAPPVVFSVAEVTTHRPKPQTLQLQKTDQTATISTLQTVTAAVQKEAPVVKTESPIKPTVGQVEKITQVQTTTKSCTPSKPKAQAAALPQHHMPVSTAPRGRVPHDYTLTPLLLSEPETAWIMCTHCASAFVQKNAYLTKSTCPRCERHSKLYGYMWPKTEKYGPNDKEERILDHRMINRFLTAEEEARARGRVYWRERMGSKGKQGSSAPSTKGTPAGEKNEQSAKQEQSQGQYVQERFAVRKKVKVQVRSTVPTPVIMTKKDEVAEAAALGLRRSGRARRVSAKLADCELDF
What is the function of this protein?
Histone methyltransferase that trimethylates 'Lys-20' of histone H4 to form H4K20me3.
What are the official names of this protein?
Histone-lysine N-methyltransferase set9, Histone-lysine methyltransferase 1, SET domain protein 9.
What is the protein family that this protein belongs to?
Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar4-20 subfamily.
What are the subcellular locations of this protein?
Nucleus. Chromosome.
Protein: AGP30_ARATH
Sequence: MGIIGKSVSLTLFALLCFTSSVFTLGVNQPGSSDPFHSLPQHLPLPPIKLPTLPPAKAPIKLPAYPPAKAPIKLPTLPPAKAPIKLPTLPPIKPPVLPPVYPPKYNKTLVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETKTDKNGYFMLLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGPFAFEPTCPK
What is the function of this protein?
Proteoglycan required for the timing of seed germination.  May function in the abscisic acid (ABA) response.
What are the official names of this protein?
Non-classical arabinogalactan protein 30, AtAGP30.
What is the protein family that this protein belongs to?
Belongs to the non-classical AGP family.
What are the subcellular locations of this protein?
Secreted, cell wall.
Protein: GC_HHV2H
Sequence: MALGRVGLAVGLWGLLWVGVVVVLANASPGRTITVGPRGNASNAAPSASPRNASAPRTTPTPPQPRKATKSKASTAKPAPPPKTGPPKTSSEPVRCNRHDPLARYGSRVQIRCRFPNSTRTEFRLQIWRYATATDAEIGTAPSLEEVMVNVSAPPGGQLVYDSAPNRTDPHVIWAEGAGPGASPRLYSVVGPLGRQRLIIEELTLETQGMYYWVWGRTDRPSAYGTWVRVRVFRPPSLTIHPHAVLEGQPFKATCTAATYYPGNRAEFVWFEDGRRVFDPAQIHTQTQENPDGFSTVSTVTSAAVGGQGPPRTFTCQLTWHRDSVSFSRRNASGTASVLPRPTITMEFTGDHAVCTAGCVPEGVTFAWFLGDDSSPAEKVAVASQTSCGRPGTATIRSTLPVSYEQTEYICRLAGYPDGIPVLEHHGSHQPPPRDPTERQVIRAVEGAGIGVAVLVAVVLAGTAVVYLTHASSVRYRRLR
What is the function of this protein?
Major attachment protein that mediates binding of the virus to cell surface heparan sulfate or chondroitin sulfate (By similarity).  Also plays a role in host immune evasion by inhibiting the host complement cascade activation.
What are the official names of this protein?
Envelope glycoprotein C.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae glycoprotein C family.
What are the subcellular locations of this protein?
Virion membrane; Single-pass membrane protein.
Protein: MGSA_BURVG
Sequence: MSKPRIALIAHDAKKDEIVALAGQYRNTLAQCRLVATGTTGGRIAAAHGLEVERKLSGPLGGDLQIGAELADGRVDVVVFLRDPMTAQPHDPDITALVRACDVHDVPVATNVATARMLLDDLARNMQDVC
What is the function of this protein?
Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
What are the official names of this protein?
Methylglyoxal synthase, MGS.
What is the protein family that this protein belongs to?
Belongs to the methylglyoxal synthase family.
Protein: MTNA_XANC8
Sequence: MNDSAHIDYARYDHIRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLAAREIAADSGSEALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLAREAQAIADEDLAANRHMGALGAGLIAPGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQGARLTVWELQQDGIDATLIADSAASHLMKSGLVQWVIVGADRICANGDTANKIGSYQLAIAARHHGVKFMVVAPSSTVDMATADGDQIEIEQRDPGELFGVGGVRTVADGIHAWNPVFDVTPGHLIDAIVTERGVIAQPDLARMQAAFGN
What is the function of this protein?
Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
What are the official names of this protein?
Methylthioribose-1-phosphate isomerase, M1Pi, MTR-1-P isomerase, S-methyl-5-thioribose-1-phosphate isomerase.
What is the protein family that this protein belongs to?
Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
Protein: RIMM_VIBVU
Sequence: MSMKGKETMSDERIVVGKFGSTYGIRGWLKVFSYTDNAESLFDYSPWYVNQKGEWVEFKVESWKRHNKGMVAKLEGLDVREDAHLLTNLEIAIDPAVLPELSEDEFYWRELFGMQVVTTNGYDLGVVTDMLETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIIKVDREAQRIEVDWDPGF
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YEJL_SALAR
Sequence: MPQLSRYSDEHVEQLLSDLLSVLEKHKAPTDLSLMVLGNMVTNLINTSVAPAQRQAIANSFTRALQSSISEDKAH
What are the official names of this protein?
UPF0352 protein YejL.
What is the protein family that this protein belongs to?
Belongs to the UPF0352 family.
Protein: MRAY_SHIFL
Sequence: MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR
What is the function of this protein?
Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
What are the official names of this protein?
Phospho-N-acetylmuramoyl-pentapeptide-transferase, UDP-MurNAc-pentapeptide phosphotransferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 4 family. MraY subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: IF1_LEIXX
Sequence: MAKKDGVIEIEGSVIEALPNAMFRVELTNGHKVLAHISGKMRQHYIRILPEDRVIVELSPYDLTRGRIVYRYK
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds.  Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).  Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
What are the official names of this protein?
Translation initiation factor IF-1.
What is the protein family that this protein belongs to?
Belongs to the IF-1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GUAA_BURVG
Sequence: MHDKILILDFGSQVTQLIARRVREAHVYCEIHPNDVSDAFVREFAPKAVILSGSHASTYEDHQLRAPQAVWDLGVPVLGICYGMQTMAVQLGGKVEWSDHREFGYAEMRAHGHTRLLDGIDDFKTAEGHGMLKVWMSHGDKVAELPPGFTLMASTPSCPIAGMADEARGYYAVQFHPEVTHTVKGRQIIERFVLQIAGAKPDWIMKNHIEEAVAKIREQVGDEEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVLDMFEGRLHAKVVHVDASEQFLGHLAGVTDPEQKRKIIGREFVEVFQAEAQKLSKAKWLAQGTIYPDVVESGGTKTKKATTIKSHHNVGGLPETLGLKLLEPLRDLFKDEVRELGVALGLPPEMVYRHPFPGPGLGVRILGEVKREYAELLRRADAIFIEELRGTTATAQDAAAGLCGEADVGKSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVTSLRAVQTTDFMTAHWAHLPYALLGRASNRIINEVRGINRVVYDISGKPPATIEWE
What is the function of this protein?
Catalyzes the synthesis of GMP from XMP.
What are the official names of this protein?
GMP synthase [glutamine-hydrolyzing], GMP synthetase, Glutamine amidotransferase.
Protein: CREM_BOVIN
Sequence: MSKCGRKKYMKTNLRQMTMETIDSQQDGSLPDSVAESESAHMQTQTGQNSIPTLAQVSVAGSSTGRGSPAVTLVQLPSGQTVHVQGVIQTPQPSVIQSPQIQTVQVATIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEEKSEEEGTPPNIAAMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQDEETELAPSHMAAATGDMPTYQIRAPTTALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD
What is the function of this protein?
Transcriptional regulator that binds the cAMP response element (CRE), a sequence present in many viral and cellular promoters.  Isoforms are either transcriptional activators or repressors.  Isoform 1 and isoform 2 are transcriptional activators.  Plays a role in spermatogenesis and is involved in spermatid maturation (By similarity).
What are the official names of this protein?
cAMP-responsive element modulator.
What is the protein family that this protein belongs to?
Belongs to the bZIP family.
What are the subcellular locations of this protein?
Nucleus.
Protein: YFGI_ECOLI
Sequence: MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQHDEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYEDELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWFN
What are the official names of this protein?
Uncharacterized protein YfgI.
Protein: PMIS2_HUMAN
Sequence: MALKPPSATQPAPNAPATPDAPPTTGDPGASAAPGSPTTTGGPGAPAEVPQEPQEPTQTPEELAFYAPNYLCLTIFAILLFPPFGLAALYFSYEGSWTQKPTSMLPPLQTMKANQNSEWEEAYINSGRTGWFGAFVVMIGLGIIYGLVLY
What is the function of this protein?
May play a role in spermatozoa mobility.
What are the official names of this protein?
Transmembrane protein PMIS2.
What is the protein family that this protein belongs to?
Belongs to the CD225/Dispanin family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: TYPH_BRADU
Sequence: MHPDLPHSQLKIRRVRLDTGRENVVVISRQSKALRAEIFRGFSRVELRLNGKVLLATLLITDDDTLAAQDEIGLSEPAFRRFAEPVGTLVAVTPATPPESLEAVRAKIRGRTLSQAEIGAIINDLAHYRYSDMEIAAFLIGSASFITSDELLALTGAMAQAGTQLVWPDPVVVDKHCIGGIPGNRTSMVVVPIVAAHGLPIPKTSSRAITSPAGTADTMEVLARVNVGVEEMKAIVSSCNGCLIWGGHVNLSPADDVLISVERPLSLDTREQMVASIMSKKIAAGSTHLLIDIPVGPTAKVTGAVEAMRLRKLFEFVGDRFGRTVEVITTDGRQPIGNGIGPVLEANDVMAVLGNDKDAPRDLREKSLRLAAHLLEYDPKLRGGAGYARARELLDSGAALKQMQKIIDAQGPSTCSTELGSLSFDIKAAHDGTVSAIDCLRLNRLARTAGAPLDKGAGIRLFKKIGDHVEQGEPLYRVYAFDQPEHDLAASAAAAGNGYAVDGHDALPSKTAS
What are the official names of this protein?
Putative thymidine phosphorylase, TdRPase.
What is the protein family that this protein belongs to?
Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
Protein: PQQB_PSEU2
Sequence: MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINWVLCNASPDIRAQLQGFAPMQPGRALRDTGISAIVLMDSQIDHTTGLLSLREGCPHQVWCTDMVHEDLSTGFPLFEMLKHWNGGLSWNRIELQGSFVIPACPNLRFTPFPLRSAAPPYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDDDEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEPRKVLIHINNTNPILDEDSPERAELARRNVEVAFDGMSIEL
What is the function of this protein?
May be involved in the transport of PQQ or its precursor to the periplasm.
What are the official names of this protein?
Coenzyme PQQ synthesis protein B, Pyrroloquinoline quinone biosynthesis protein B.
What is the protein family that this protein belongs to?
Belongs to the PqqB family.
Protein: SYT_PSYIN
Sequence: MPIITLPDGNQRQFDNTTSIMEIAADIGPGLAKACIAGRVDGQLVDACDPIEKDANIAIITAKDDQGLEILRHSCAHLLGHAIKQLYPNAKMAIGPTIENGFYYDIDLDVTINDDELAKIAKRMNELVKTNYTVVKEKVSVEEAKALFKERGESYKLEILEGIHPDDRPGLYHHEEYIDMCRGPHVPVMKFCQYFKLMKVSGAYWRGNSDNKMLQRIYGTAWADKKQLNAYLKRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHSNGWTIYRELEKYVREQTEAYDYQEVKAPQILDRALWEKSGHWGKYKDNMFCTSSENRDYAIKPMNCPGHLQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRAFTQDDAHIFCTEEQILDEVSACIQMVFECYKTFGFDDIAVKLSTRPDQRVGDDATWDKAEAALANALTTNNINYGVLPGEGAFYGPKIEFTLYDCLGRGWQCGTIQLDFSMPGRLDASFVGEDNERHTPVMIHRAILGSLERFIGILTEEYAGVYPTWLSPKQVVVMNITDKQSAFVDEVVNKLKKSGIRAISDLRNEKIGFKIREHTLKRVPYLLVIGDQEVEAGEVAVRTRKGDDLGKFKVDDFAAYIKEEIITRR
What is the function of this protein?
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).  Also edits incorrectly charged L-seryl-tRNA(Thr).
What are the official names of this protein?
Threonine--tRNA ligase, Threonyl-tRNA synthetase, ThrRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RR4_JAMAU
Sequence: MSRYRGPRVKIIRRLGALPGLTNKTFKSKSSFIDRSTSNKKVSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRFDMAPTIPGARQLVNHRHISVNNGIVDIPSYNCEPGDTITIRNKQKSQSIITKNTNLFQKIKIPSHLTFDSTQLRGFVNQTVNREWVNLKINELLVVEYYSRQV
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S4, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: CNN3_BOVIN
Sequence: MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGANFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDYPRDYQYGDQGIDY
What is the function of this protein?
Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction.  It is capable of binding to actin, calmodulin and tropomyosin.  The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity (By similarity).
What are the official names of this protein?
Calponin-3, Calponin, acidic isoform.
What is the protein family that this protein belongs to?
Belongs to the calponin family.
Protein: RPOC_VIBPA
Sequence: MKDLLNFLKAQHKTEEFDAIKIGLSSPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSLPSRIGLLMDIPLRDIERVLYFEMYVVTEPGMTDLEKGQMLTEEEYLDRLEEWGDEFTAKMGAEAIKDLLGSMDMHAEAEQMREELETTNSETKRKKVTKRLKLVEAFIASGNNPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYSKLETRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTREKINVKGEGMYLSGPAEAEKAYRTKQAELHARVKVRITETVVDEDGNSTTETKMVDTTVGRAMLWQIVPAGLPYSIVNQKLGKKQISNLLNEAYRKLGLKDTVIFADQIMYTGFAYAALSGVSVGIDDMVVPPAKYTEIAEAEEEVREIQEQYQSGLVTAGERYNKVIDIWASTNDRVAKAMMENLSSETVVNREGEEEQQESFNSIYMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFKEGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDVVVTEHDCGTHEGVDMMPHIEGGDVKVALSELALGRVVAEDVLKPGTEDVLIPRNTLIDEKWCQIMEENSVDSMKVRSVVTCDSDFGCCAQCYGRDLARGHLVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAAENSIQAKNNGSVKLHNAKFVTNKDGKLVITSRASELTIIDEFGRTKEKHKLPYGSLLSKGDNDAVEAGETVANWEAHTLPIITEVAGRIQFVDMIDGVTVSRQTDDLTGLSSSEVTDAAARPAAGKDMRPAIKLVDEQGNDVMIPGTEMPAHYFLPGKAIVNIEDGAEVGVGDTLARIPQKSGGNKDITGGLPRVADLFEARKPKEPAILAEHTGTVSFGKETKGKRRLVITRDSGEVYEEMIPKHRQLNVFEGERVERGDVIADGPESPHDILRLRGVHAVTQYIANEVQEVYRLQGVKINDKHIETIVRQMLRKCTITHAGDSEFLPGEQVEYSQVKIANRNLEAEGKEPARFERELLGITKASLATESFISAASFQETTRVLTEAAVSGKRDDLRGLKENVIVGRLIPAGTGFAYHQERQAKRAEAQEGPSAEQATDNLAALLNAGFSSDE
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta', RNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family.
Protein: EIF3L_EMENI
Sequence: MSYDERANAHPNLNDESDVEEEALVNDYREQVNFDDGMSELDRTTSLGAASQTQDLQAQLAAAATPLEYQATLETKFASYDNYCSLFHYILNSDGPVELEVPSYYWAWDVIDEFIYQFESFCRYRNRVARSGSNEEEAQLLRENPNTWGCYSVLNVLYSLIQKSQINEQLAAMKRGEDPAAFAGEYGSRPLYKMLGYFSIIGLLRVHCLLGDFTLALKTLDDIEMNKKAMFARVMAAHFTTYYYVGFSYMMTRRYGDAIRMFSHILVYVSRTKNFQKGGNSYDAIAKKNDQMYALIAICVALHPTRLDDTIHSALREKYGEQLHRLQQGGPEALPLFEELFRSACPKFISPTPPDFDNPALNVDPVDHHTAIFMDEVKNTLYNPTIRSYLKLYTTMDLQKLAGFLDVEPEKLRSWLLVNKQRSRQVRWVEGGLLEGETVSANDLDYALEKDLIHVSETKAGRRLVDWYLRNLARVY
What is the function of this protein?
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.  The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
What are the official names of this protein?
Eukaryotic translation initiation factor 3 subunit L, eIF3l.
What is the protein family that this protein belongs to?
Belongs to the eIF-3 subunit L family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NHAA_AERHH
Sequence: MSDVIKKFLKLEAASGIILIMAAMLAMILANSGLAGSYQAFLDTQVQVRIAALDINKPLLLWINDGFMAVFFLLVGLEVKREMLEGALSSRVQATFPAIAAVGGMLAPALIYAFFNYSDEVARAGWAIPAATDIAFALGVMALLGKRVPVSLKVFLLALAIMDDLGVIIIIALFYTQQLSLTALAIGILATLTLLWMNRRGEDRISLYMLVGLVLWVAVLKSGVHATLAGVIVGFMIPLSGKRYASPLKQLEHALHPWSAYLILPLFAFANAGVSLEGIGLSALLSPVPLGIMLGLFIGKPLGVFTISWLAVKLGIAQLPNGVNFKQIFAVSILCGIGFTMSMFIASLAFEHGGLDYGSYSRLGILVGSTLAAIVGYLALRIALPNREADQSTEGL
What is the function of this protein?
Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.
What are the official names of this protein?
Na(+)/H(+) antiporter NhaA, Sodium/proton antiporter NhaA.
What is the protein family that this protein belongs to?
Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: MDH_VOGIN
Sequence: AKPAKRVAVTGAAGQIAYSLL
What is the function of this protein?
Catalyzes the reversible oxidation of malate to oxaloacetate.
What are the official names of this protein?
Malate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the LDH/MDH superfamily. MDH type 2 family.
Protein: EFTU_PEA
Sequence: MALSSTAATTSSKLKLSNPPSLSHTFTASASASVSNSTSFRPKLTLTRLSSSFLNPSTILHLTPSQRTNRPSSSPFTVRAARGKFERKKPHLNIGTIGHVDHGKTTLTAALTMALACLGNSAPKKYDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPSVVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDDIPIVSGSALLALEALMANPTLKRGNNQWVDKIYQLMDEVDKYIPIPQRQTELPFLLAIEDVFSITXRGTVATGRIERGLVKVGDVVDLVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHSKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE
What is the function of this protein?
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
What are the official names of this protein?
Elongation factor Tu, chloroplastic, EF-Tu.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RL14_HELPS
Sequence: MIQSFTRLNVADNSGAKEIMCIKVLGGSHKRYASVGSVIVASVKKAIPNGKVKRGQVVKAVVVRTKKEIQRKNGSLVRFDDNAAVILDAKKDPVGTRIFGPVSREVRYANFMKIISLAPEVV
What is the function of this protein?
Binds to 23S rRNA.  Forms part of two intersubunit bridges in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL14 family.
Protein: GREA_MARMM
Sequence: MNKIPMTVAGQIALDEELKRLKTIERPAVIAAISEAREHGDLSENAEYHAAKERQGWIEGRVQELEDKLARAQVIDITKMSGDTVKFGATVTVLDEDTEQESTYQIVGEDESDVKSGKISISSPIARSMINKEVGDVAEVNAPGGLKSYEIMSVSWG
What is the function of this protein?
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites.  The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes.  Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus.  GreA releases sequences of 2 to 3 nucleotides.
What are the official names of this protein?
Transcription elongation factor GreA, Transcript cleavage factor GreA.
What is the protein family that this protein belongs to?
Belongs to the GreA/GreB family.
Protein: CYAY_ALIF1
Sequence: MNNTEFHELVDEKLQLIEDMIDDSGADIEPVITGNVLTLEFENRSQIVINKQEPMHEIWLASKSGGFHFSYVDEKWTCSKTGMEFIEMVKEECQKHADEEIEWA
What is the function of this protein?
Involved in iron-sulfur (Fe-S) cluster assembly.  May act as a regulator of Fe-S biogenesis.
What are the official names of this protein?
Iron-sulfur cluster assembly protein CyaY.
What is the protein family that this protein belongs to?
Belongs to the frataxin family.