PharMolix/UniProtQA huggingface dataset:
Protein: KPRS1_ENTFA
Sequence: MTENYQDDTLRIFSLNANRPLAEKIAASVGTELGKSTVRQFSDGEIQINIEESIRGDHVYIIQATNAPVNDHLMELLILIDALKRASAKTVNVILPYYGYARQDRTAKPREPITAKLVANMLVEAGATRLLTLDLHTVQVQGFFDIPVDNLFTMPLFAHYYRQQALVGEEIVIVSPKNSGVQRARSLSEYLDATLAIVDHEEIDGVRQEGYVIGNVAGKKCILVDDILNTGQTLATAAEVLMKNGAQEVYACASHGLLSEGAKATLENAPIKEISITDSVYTTADRQPATLNIISCAELMGEALLRIHENKPMSPLFRLEPKGE
What is the function of this protein?
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).
What are the official names of this protein?
Putative ribose-phosphate pyrophosphokinase 1, RPPK 1, 5-phospho-D-ribosyl alpha-1-diphosphate synthase 1, Phosphoribosyl diphosphate synthase 1, Phosphoribosyl pyrophosphate synthase 1, P-Rib-PP synthase 1, PRPP synthase 1, PRPPase 1.
What is the protein family that this protein belongs to?
Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PETD_PROM4
Sequence: MSTLKKPDLSDPKLRSKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACVVGLAVLDPAMLGDKANPFATPLEILPEWYLYPVFQILRVVPNKLLGIALQTLIPLGLILIPFIENVNKFANPFRRPVAMGFFLFGTLLTIYLGIGACFPIDKSLTLGLF
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
What are the official names of this protein?
Cytochrome b6-f complex subunit 4, 17 kDa polypeptide.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family. PetD subfamily.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Multi-pass membrane protein.
Protein: FABA_ECO5E
Sequence: MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQDTSAF
What is the function of this protein?
Necessary for the introduction of cis unsaturation into fatty acids.  Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP.  Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
What are the official names of this protein?
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA, Beta-hydroxydecanoyl thioester dehydrase, Trans-2-decenoyl-[acyl-carrier-protein] isomerase.
What is the protein family that this protein belongs to?
Belongs to the thioester dehydratase family. FabA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1729_PSYWF
Sequence: MNIQALMQQAQAMQKQVEANVEKAKKELADKEVQAEAGNGLVKVTMTGRHVVKRLSIDPSLLEDEPDLIEDLIAAAINAAVTKADELSETTLAKATSGMGLPPGMQGLFG
What is the function of this protein?
Binds to DNA and alters its conformation.  May be involved in regulation of gene expression, nucleoid organization and DNA protection.
What are the official names of this protein?
Nucleoid-associated protein PsycPRwf_1729.
What is the protein family that this protein belongs to?
Belongs to the YbaB/EbfC family.
What are the subcellular locations of this protein?
Cytoplasm, nucleoid.
Protein: FOLD_SHEB2
Sequence: MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTLVGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD
What is the function of this protein?
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
What are the official names of this protein?
Bifunctional protein FolD.
What is the protein family that this protein belongs to?
Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
Protein: U71K3_FRAAN
Sequence: MKKAELVFIPAPGAGHLVSALQFGKRLLQRDDRISITVLAIKSAAPSSLGSYTEALVASESRLQLIDVPQAELPPLEFAKSPAKFFILNIENHVPNVREALTNYVSSKQDSVSIVGVVLDFFCVSMIHVVNEFNLPSYLFMTSNAGYLSFEFHFPAQDSRTGRPPKDSDPDWLVPGIVPPVPTKVLPVSLTDGSYYNYLGVASRFREAKGIIANTCVELETHAFNSFAEDQTTPPVYPVGPVLDLNDGQARSNLNQAQRDKIISWLDDQPEESVVFLCFGSMGSFTEAQVKEIALGLEQSGQRFLWSLRLTPPKGSKSLTPVDCSNLEEVLPDGFLERTREKGLICGWAPQVDVLSHKATGGFVSHCGWNSILESLWHGVPIVTWPMYAEQQLNAFRLVKEMGLGLEMRLDYKRGGDEVVKADEIGKAVASVMENSEVRKKVKEIGVVCRKAVEDGGSSSVSLGRFIEDVLRNHFGSE
What is the function of this protein?
Glycosyltransferase that catalyzes the glucosylation of diverse hydroxycoumarins, naphthols, flavonoids, acylphloroglucinols, and pelargonidin (PubMed:26859691).  Involved in fruit ripening by synthesizing acylphloroglucinol glucosides and anthocyanin (PubMed:26859691).
What are the official names of this protein?
UDP-glycosyltransferase 71K3, Acylphloroglucinol glucosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the UDP-glycosyltransferase family.
Protein: APOA5_MIRAN
Sequence: MVAVLTWALALLSAFATVQTQKGFWDYFSQSSGDKSKVARVQQQKLIWEPTSLKDSLEQDLSNMDKFLEKLGPLSGQGREPPGLPHDPEGMRQQLQEELAEVRARLEPYMAEAHQQVGWNLEGLRRQLKPYTVELMEQVARRVQELQEQLRVVGEGTKAQLLGGVDEARGLLQELQTRVVQHTGRVGELFHPYAQRLVTGIGRHVQELHRSVAPHAAASSARLSRCVQTLSRKLTLKAEALHARIQQNLDRLREELSAFARAGAGGAEEGANPDPQMLPQEVRQRLQAFRHDTFLQIADFTRAIDQETEEVQLQLAPPPPGHSAFAPELLQADSSEARSKLQARLEDLWEDINDSLHDRGLSHLEEP
What is the function of this protein?
Minor apolipoprotein mainly associated with HDL and to a lesser extent with VLDL.  May also be associated with chylomicrons (By similarity).  Important determinant of plasma triglyceride (TG) levels by both being a potent stimulator of apo-CII lipoprotein lipase (LPL) TG hydrolysis and an inhibitor of the hepatic VLDL-TG production rate (without affecting the VLDL-apoB production rate) (By similarity).  Activates poorly lecithin:cholesterol acyltransferase (LCAT) and does not enhance efflux of cholesterol from macrophages (By similarity).  Binds heparin (By similarity).
What are the official names of this protein?
Apolipoprotein A-V, Apo-AV, ApoA-V, Apolipoprotein A5.
What is the protein family that this protein belongs to?
Belongs to the apolipoprotein A1/A4/E family.
What are the subcellular locations of this protein?
Secreted. Early endosome. Late endosome. Golgi apparatus, trans-Golgi network. Note=In the presence of SORL1, internalized to early endosomes, sorted in a retrograde fashion to late endosomes, from which a portion is sent to lysosomes and degradation, another portion is sorted to the trans-Golgi network.
Protein: BGAL_CLOC7
Sequence: MRIGVDYYPEHWDRQLWEKDAQLMKEIGVKVVRLAEFAWCKLEPIEGQYDFKWLDDVIEIFSVRNIEIVLGTPTNTPPLWLYEKYPDAIQVNESGERQFIGIRGHRCYNSSSMRKYTKAIVEAMTERYANNKAVIGWQIDNELDATHCCCDNCTEKFRGWLKNKYSTLENINKEYGNVVWSGEYSAWSQVTAPLGGSPFLNPSYLLDYNRFASDSMVEYIDFQREIIRKNCPSQFITTNTWFTGNLPNFYDAFENLDFVSYDNYPTTNEITDEEELHSHAFHCDLMRGIKKKNFWIMEQLSGTPGCWMPMQRTPKPGMIKGYSFQAIGRGAETVVHFRWRNAIIGAEMFWHGILDHSNVKGRRFYEFAELCREVNKINEEIPDYKINNEVAILYSSDQDFAFKIQPQVEGLYYLQQLKAFHNALIRLGVGTDIINWSESLNKYKVVIAPTLYLTDDNVTTELYRFVEAGGTLILTNRTGVKNMNNVCLMEQMPSNLKECAGVVVKEYDPIGHSIHTIKDEAGKVYQCKQWCDILEPTTAKVIATYNDDFYIDEAAVTVNKYKKGNVYYLGTVFNSDYYIELLSKILDEKELPYYKKLPYGLELSVLENENGKYLMVFNNSNEIKCFEGKHEGKSIIRNELDGKSFTLEPYGIEVLQLVE
What is the function of this protein?
Involved in plant cell wall degradation in cooperation with cellulosome.  Hydrolyzes both p-nitrophenyl-alpha-L-arabinopyranoside (pNPAp) and p-nitrophenyl-beta-D-galactopyranoside (pNPGp), with higher activity for pNPAp.  Shows hydrolysis activity against p-nitrophenyl-beta-D-fucopyranoside (pNPFp), but not against p-nitrophenyl-alpha-L-arabinofuranoside (pNPAf), o-nitrophenyl-beta-D-galactopyranoside (oNPGp), p-nitrophenyl-beta-D-xylopyranoside (pNPXp), p-nitrophenyl-beta-D-glucopyranoside (pNPGLp), p-nitrophenyl-beta-D-cellobiopyranoside (pNPCp), p-nitrophenyl-beta-lactopyranoside (pNPLp) or p-nitrophenyl-alpha-galactopyranoside (pNPalphaGp).  No detectable activity against arabinan or arabinoxylan, but activity against arabinogalactan can be detected.  Increases degradation activity of alpha-L-arabinofuranosidase (ArfA) and endo-1,4-beta-xylanase (XynA) when corn fiber gum and corn stem powder are used as substrates.
What are the official names of this protein?
Beta-galactosidase BgaA, Beta-gal, Alpha-L-arabinopyranosidase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 42 family.
Protein: RLME_EHRRG
Sequence: MQKMSSIPNVIFILCDIANNIELLNSTFDKKKFDVVLSDMAPKACGNKQVDHANIINLCEMSLEIAVKFIKPNGIFITKILQGEYEKEFYQSVKYHFNSVKYFKPKASRKDSSEMYLVSLGFKENLEYI
What is the function of this protein?
Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase E, 23S rRNA Um2552 methyltransferase, rRNA (uridine-2'-O-)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL33_AERHH
Sequence: MAKGIREKIRLNSSAGTGHFYTTTKNKRTMPEKMEIKKFDPVVRQHVIYKEGKIK
What are the official names of this protein?
50S ribosomal protein L33.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
Protein: UBIG_SALNS
Sequence: MNTEKPSVAHNVDHNEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYITERSGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIEVEYVQETVEEHAAKHAQQYDVVTCMEMLEHVPDPQSVVHACAQLVKPGGEVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLSWVDETVLKEQHITGLHYNPITNTFKLGPGVDVNYMLHTRAKKA
What is the function of this protein?
O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.
What are the official names of this protein?
Ubiquinone biosynthesis O-methyltransferase, 2-polyprenyl-6-hydroxyphenol methylase, 3-demethylubiquinone 3-O-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
Protein: ISPG_BACC1
Sequence: MTHRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIKKQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRRHKVEAVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYEKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTLQVPIKVAVLGCAVNGPGEAREADIGIAGARGEGLLFRKGQVVRKVPEEIMVEELKKEIDVIAAEMAAEREKEKETQEQ
What is the function of this protein?
Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.
What are the official names of this protein?
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase.
What is the protein family that this protein belongs to?
Belongs to the IspG family.
Protein: TYPH_MOUSE
Sequence: MAAPGTPPPSASGGGGGEPRQLPELIRLKRDGGHLREADIRNFVHAVIDGRAQDTQIGAMLMAIRLQGMNLEETSVLTRALAESGQQLEWPKAWHQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRSLGHTGGTLDKLESIPGFGVTQSPEQMLHILEEVGCCIVGQSAKLVPADGILYAARDVTATVDSVPLITASILSKKAVEGLSTLVVDVKFGGAAVFPDQEKARELAKMLVRVGVSLGLKVAAALTAMDNPLGRSVGHTLEVEEALLCLDGAGPPDLRDLVIRLGGAILWISGQAETQDQGAARVAAALDDGSARRRFQLMLSAQGVDPGLAKALCSGSPTQRRQLLPHAREQEELLAPADGIVECVRALPLARVLHDLGAGRSRAGQPIRPGVGAEVLVDVGQCLSRGTPWLRVHLDGPALSSQQRRTLQGALVLSDRAPFKVPSPFAELVLPPTIAQP
What is the function of this protein?
Catalyzes the reversible phosphorolysis of thymidine.  The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (By similarity).
What are the official names of this protein?
Thymidine phosphorylase, TP, TdRPase.
What is the protein family that this protein belongs to?
Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
Protein: HS235_ARATH
Sequence: MASSSALALRRLLSSSTVAVPRALRAVRPVAASSRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD
What are the official names of this protein?
23.5 kDa heat shock protein, mitochondrial, AtHsp23.5.
What is the protein family that this protein belongs to?
Belongs to the small heat shock protein (HSP20) family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: TOTA2_DROSI
Sequence: MNSSTSLMCFALLLISPLCMGYSDEDREADSRRIAEIIQNAQDDDAKINSTQELLDIYRRLYPSLSLEDRENIDKFVNEHTDAIVIDGVPIQGGRKAKIIGKIVSPAAKGLAVGFFEELGSKIAQLFTG
What is the function of this protein?
A humoral factor that plays a role in stress tolerance; gives increased resistance to the lethal effects of bacterial challenge and stress.  Regulated by the JAK/STAT pathway and NF-KB-like Relish pathway in the fat body, upd3 in the hemocytes and Mekk1 in response to septic injury and consequent immune response (By similarity).
What are the official names of this protein?
Protein Turandot A2.
What is the protein family that this protein belongs to?
Belongs to the Turandot family.
What are the subcellular locations of this protein?
Secreted. Note=Secreted from the fat body into the hemolymph.
Protein: QOX3_STAAM
Sequence: MSHDTNTIDSRTHEGELNKLGFWIFITAEFALFGTLFATLLTLQHGGDYAGKMTTELFELPLVLIMTFALLFSSYTCGIAIYYMRQEKQKLMMFWMIITLLLGLVFVGFEIYEFAHYASEGVNPTIGSYWSSFFILLGTHGCHVSLGIVWAICLLIQIQRRGLDKYNAPKLFIVSLYWHFLDVVWVFIFTAVYMIGMVYSG
What is the function of this protein?
Catalyzes quinol oxidation with the concomitant reduction of oxygen to water.
What are the official names of this protein?
Probable quinol oxidase subunit 3, Quinol oxidase polypeptide III.
What is the protein family that this protein belongs to?
Belongs to the cytochrome c oxidase subunit 3 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: YCIC_ECOK1
Sequence: MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAVLLIYLFRLYMLIRQ
What are the official names of this protein?
UPF0259 membrane protein YciC.
What is the protein family that this protein belongs to?
Belongs to the UPF0259 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RAE1A_MOUSE
Sequence: MAKAAVTKRHHFMIQKLLILLSYGYTNGLDDAHSLRCNLTIKDPTPADPLWYEAKCLVDEILILHLSNINKTMTSGDPGETANATEVGECLTQPLKDLCQKLRNKVSNTKVDTHKTNGYPHLQVTMIYLQSQGQIPSATWEFNISDSYFFTFYTENMSWRSANDESGVIMNKWKDDGEFVKRLKFLIPECRQEVDEFLKQPKEKPRSTSRSPSITQLTSTSPLPPPSHSTSKKGFISVGLIFISLLFAFAFAM
What is the function of this protein?
Acts as a ligand for KLRK1.
What are the official names of this protein?
Retinoic acid early-inducible protein 1-alpha, RAE-1-alpha.
What is the protein family that this protein belongs to?
Belongs to the NKG2D ligand family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor, GPI-anchor.
Protein: SHUT_VZVD
Sequence: MGLFGLTRFIHEHKLVKPSIISTPPGVLTPVAVDVWNVMYTLLERLYPVGKRENLHGPSVTIHCLGVLLRLLTQRSYYPIFVLERCTDGPLSRGAKAIMSRAMNHDERGTSDLTRVLLSSNTSCSIKYNKTSETYDSVFRNSSTSCIPSEENKSQDMFLDGCPRQTDKTICLRDQNVCSLTSTMPSRGHPNHRLYHKLCASLIRWMGYAYVEAVDIEADEACANLFHTRTVALVYTTDTDLLFMGCDILLDAIPMFAPVVRCRDLLQYLGITYPEFLVAFVRCQTDLHTSDNLKSVQQVIQDTGLKVPHQMDTSTRSPTYDSWRHGEVFKSLTVATSGKTENGVSVSKYASNRSEVTVDASWALNLLPPSSSPLDNLERAFVEHIIAVVTPLTRGRLKLMKRVNIMQNTADPYMVINTLYHNLKGEKMARQYARIFKQFIPTPLPLNTVLTKYWN
What is the function of this protein?
Minor structural protein that acts as an endoribonuclease during lytic infection.  Degrades host mRNAs in the cytoplasm by cutting them at preferred sites, including some in regions of translation initiation (By similarity).
What are the official names of this protein?
Virion host shutoff protein, Vhs.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae VHS protein family.
What are the subcellular locations of this protein?
Virion.
Protein: SYFB_CHLL3
Sequence: MKISVNWLKDFLPSFSPDITSLVEKLTFLGLEVEDVESTPLPDLRVVVGRVQSVALHPDADRLRICMVDTGLEEPLQIVCGAPNVAEGMLVPVATEGSRLTMQDGTSFVIKPSKIRGQRSFGMICAADELGLSADHSGVMELDSSYAVGEPFARYLDSDTVLDIAVTPNRPDVLSHLGIARELGSAPDAILFPEEAPLEFSADSPLVQVMDSGACPLYVGVIIRGVTVGPSPRWLSARLESIGLRPKNNIVDITNFILHALGQPLHAFDLQKLKGGRVIVRSDFSGSFTTLGAEQCTVEPGMPVICDTQMPVALAGVMGGLDSAVGEGTVDILLEAACFAPSAVRRSARKAGISSDSSYRFERGIDIRNVLPAARAAVALILETAGGTVGEATLQGDPSPALLVLPFRPRRANELLGTAIETDAMQAMLARIGFRTLALDEGVMQVEVPSCRIDVLQEIDLIEEVARLHGYDNIEASGRLAATYPASRTRPGYFPDFLRGVAVGLDFREVLTNPLIRREEAAPFGDGLVSVLNPISEGLEVLRPGLVPGMLKVIAHNIRHGNRDMRLFEVAHGFSVADPSGAAEQGPLGAYCEKEWLVLALTGNRYPRSWNQPPDRVDFYDAVGAAEMLLGKLNLLDKSAVNIYNENTVSIDLELTEGKKKRSQRAGRAMRLDSALLSQFGIEQDVFTVELDVSVLEMLYSPDVVYDPPSKFPAVQRDLSFILPGTVPVQSLVGLVRSSDPLIRDVSVFDVFERGSGGGGERSVGLSISIADHSGTLQEGRISEILRTVGVNAESKLGAVIRQV
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RNC_ECOL6
Sequence: MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
What is the function of this protein?
Digests double-stranded RNA.  Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S).  Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon.  Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
What are the official names of this protein?
Ribonuclease 3, Ribonuclease III, RNase III.
What is the protein family that this protein belongs to?
Belongs to the ribonuclease III family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GRCA_VIBVY
Sequence: MIQGIQITKAANDDLLNSIWLLDSEKNEARCVAAVSGYEADQIVAINELGEFESREVAIEAAPRIEGGQHLNVNVLKRETLEDAVAHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL
What is the function of this protein?
Acts as a radical domain for damaged PFL and possibly other radical proteins.
What are the official names of this protein?
Autonomous glycyl radical cofactor.
Protein: RNPH_RHOBA
Sequence: MNSATDSARPHDQIRPVEIECGYLESNPASVLYKSGKTIVLCTASVETNVPPWMEGRGKGWVTAEYNMLPGSTSPRKRRDRSGKVDGRTTEIQRLIGRSLRAIVDLHALGERSITVDCDVLQADGGTRTASITGGYIALSLAVSQLAAIPELDPPVDPTAVLRDSVAAISVGVIGEDVVLDLDYRLDSAADVDMNVIMTGSGRFIELQGTGEEATFDDVQLAELLRLGKIGIAELTKLQKAQLVTV
What is the function of this protein?
Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation.  Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important.  Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
What are the official names of this protein?
Ribonuclease PH, RNase PH, tRNA nucleotidyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNase PH family.
Protein: RL16_STAEQ
Sequence: MLLPKRVKYRRQHRPKTTGRSKGGNYVTFGEYGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRILFEVAGVPEEVAREALRLASHKLPVKSKFVKREELGGETNES
What is the function of this protein?
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
What are the official names of this protein?
50S ribosomal protein L16.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL16 family.
Protein: TX149_LYCSI
Sequence: MKFVLLFGVLLVTLFSYSSAEMLDDFDQADEDELLSLIEKEEARKDRIPKHHECTSNKHGCCRGHLFKYKCQCTTVVTQSGEETERCFCGTPPHHKAAELVVGFGKKIFG
What are the official names of this protein?
U1-lycotoxin-Ls1gg, Toxin-like structure LSTX-A49.
What is the protein family that this protein belongs to?
Belongs to the neurotoxin 19 (CSTX) family. 03 subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: RPO1C_ARCFU
Sequence: MSKVDYDSILKDFPFPPAVKEEIKAELEKHGLKKTEAKKVVEKCFQAYLANLMEPGEAAGIVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEILDVRKNPSTPMMTIRLLPEYAKDREKAREVANRIEATYVKDVADIEVDIRRFTIIVKPDEKALERKGLTVEDLKSKIGKALKTEVEETEQGLAVQITEPSYKALMAAFDKLKDTVIMGLKEIKRVIIRKEEDEYVLYTEGSNLKKIMKVKGVDFTRTTTNNIYEIYEVLGIEAARNAIIREALDTLEEQGLEVDVRHIMLVADVMTADGELRQIGRHGVAGEKQSILARAAFEMTVNNLLDAAVRGEEDHLRGITENIIVGQPIKLGTGDVELVLKMGGKK
What is the function of this protein?
DNA-dependent RNA polymerase (RNAP) catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.  Forms part of the jaw domain.
What are the official names of this protein?
DNA-directed RNA polymerase subunit Rpo1C, DNA-directed RNA polymerase subunit A''.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HIS2_STRTD
Sequence: MLETLYKEALDRKNNPKEGSYTNYLFDKGLDKILKKVGEEATEVVIGAKNADKTEIANETADVLYHLAVMLVETGVSPEDVEAVLRARQGKQSNVHDRKEVTDY
What are the official names of this protein?
Phosphoribosyl-ATP pyrophosphatase, PRA-PH.
What is the protein family that this protein belongs to?
Belongs to the PRA-PH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL16_RUEST
Sequence: MLQPKRTKFRKMHKGRIKGLAKGGSDLNFGTYGLKAVTPERVTARQIEAARRAMTRHMKRQGRVWIRIFPDTPVTSKPVEVRMGKGKGSVDFWACKVKPGRVMFEIDGVNEDIAREALRLAAMKLPVQTRIVVREDW
What is the function of this protein?
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
What are the official names of this protein?
50S ribosomal protein L16.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL16 family.
Protein: HEM3_PROMS
Sequence: MTNFKLKIASRRSKLAMVQTLWVKDQLEKNIPNLEVSIEAMATQGDKILDVALAKIGDKGLFTKELEAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLENLPEGSIVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFESRIHQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFLRELEGGCQVPIGVNSKIQNEQLCLTGMVASLDGERLIKDQYIGDINDPEEVGKELAKKLKQQGAEEILSEIFKKFREK
What is the function of this protein?
Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
What are the official names of this protein?
Porphobilinogen deaminase, PBG, Hydroxymethylbilane synthase, HMBS, Pre-uroporphyrinogen synthase.
What is the protein family that this protein belongs to?
Belongs to the HMBS family.
Protein: RS13_LACCB
Sequence: MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKNAGVPENVRQDDLTPEQEDKIRAALDSVKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKASMAGKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: YIBQ_ECOLI
Sequence: MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
What are the official names of this protein?
Uncharacterized protein YibQ.
What is the protein family that this protein belongs to?
To H.influenzae HI_0755.