PharMolix/UniProtQA huggingface dataset:
Protein: CADH2_DANRE
Sequence: MYPSGGVMLGLLAALQVAVQGTGAMPCQPGFTENEYNVMTADVITEGQVLLKVDFVDCGRGSGLRFESGDPADFRIDADGTVMAARTLQLTDRKGQSLEIKAKDENSQEQWMVHINFTQPKQVPVILFPRHSVLVKGDDSVNRVKRDWVIPPVNVLENSRKQFPEELVKIQSDKDKSNTLRYSVTGPGADQNPTGLFIIDPISGLLSVTKPLDREHIPNFHLRAHAVDINGNQMENPIDIIINVIDMNDNRPEFTHQIWNGTVDEGAKPGTFVMTVTSQDKDDPNTANGMLRYKILSQTPESPSSNMFTINNKTGKIITVAAGLDREKVPQYTLIIQATDMEGNPTYGLSNTATAVIRLLDVNDNAPEFTRETFHGEVPENRVNVIVTNLTVTDKDEPGTPAWNAVYRIISGDPTGRFSIPTDPVTNEGLVTVVKPVDFEMNRSFMLTVVADNEVPLASGIHRTRQSTATVSIRVIDVNESPNFDPNPKQIKLEEGLPQWSMLTTFTAHDPDRYMQQTISYSKLYDPANWLEIDPNNGRISTIAVLDRESPYVKNNLYNATFMASDNGVPRASGTGTLQIYLLDINDNAPRVFPQEAEVCERPEPNAINITAVDGDLNPNAGPYAFELPNRPSDIRRNWTLTRISGDHAQLSLKISYLESGIYELPISITDSGNLPMSNTTYLRIKVCQCDHHGDCVDMERIMAAGLGTGAIIAILICIIILLVLVLMFVMWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTLEPDMIKPVGIRRLDERPMHSEPNYPIRSAAPHPGDIGEFIHEGLKAADTDPTAPPYDSLLVFDYEGSGSTAGSLSSLHSSSSGGDQDYDYLNDWGPRFRKLADMYGGNDD
What is the function of this protein?
Calcium-dependent cell adhesion protein; preferentially mediates homotypic cell-cell adhesion (By similarity).  Cadherins contribute to the sorting of heterogeneous cell types, and thereby play an important role during embryonic development (PubMed:12091300).  Required for normal neural tube morphogenesis.  Required to allow mid- and hindbrain neurons to reach and maintain their appropriate positions within the neural tube by restricting neuronal motility within the embryonic mid- and hindbrain (PubMed:12091300).  Required for proper neurite branching.  Required for pre- and postsynaptic organization (By similarity).
What are the official names of this protein?
Cadherin-2, Neural cadherin, N-cadherin, Parachute, ZNCAD.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type I membrane protein.
Protein: RECA_XANCI
Sequence: MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIAECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNSQVATRLEAELREKFQPAEAPREAGDDEDKE
What is the function of this protein?
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.  It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
What are the official names of this protein?
Protein RecA, Recombinase A.
What is the protein family that this protein belongs to?
Belongs to the RecA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ENDA_METMA
Sequence: MNLLKTQLKGDRVLAGKEAVAELYKTGYFGRPKDDGLELSLVEAAYLQSRGKLDIELEGKLLGFRAFFEQASLRQQNFELKYIVYKDLKERGYYVQPSAADFRVYPRGSHPGKSAAKIFVHVLSERQPLSVKLLQESVASAENVHKQFILAVVDEESDLTFYEIKSASPKGEMPEPFPAVKADATFLEDRVIAWDAEASGALYSRGFYGKMLDPERLQLSLVESLYLFSRGVIVVRDRKGKIFSFDEFVEKASEIEGSFLRKYSAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPHSEYLVNVIPEDYEFRLPVMSGAVRLANSVRKRMLFAVEKGEEVEYLDIGRVKM
What is the function of this protein?
Endonuclease that removes tRNA introns.  Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron.  The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini.  Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (By similarity).
What are the official names of this protein?
tRNA-splicing endonuclease, tRNA-intron endonuclease.
What is the protein family that this protein belongs to?
Belongs to the tRNA-intron endonuclease family. Archaeal long subfamily.
Protein: DAPE_ECOL5
Sequence: MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFINELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKEQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA
What is the function of this protein?
Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.
What are the official names of this protein?
Succinyl-diaminopimelate desuccinylase, SDAP desuccinylase, N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M20A family. DapE subfamily.
Protein: CUP4_CAEBR
Sequence: MRLLLIFTVIFVFYLAILKRDVNAQQQGIDSEEGDAETFFNRTYSAHQSDLEKRIFRGYDIKKRPVKNASVPTVVDVHWHVIHVSINQKEQTMTLHGHIYMRWYDEYLVWDPKDFAGIHYARVKKWQVWQPKIRVSNSASGLASAFDFSTSAHVIIQMVEKDRAKVEMYPTFSIKVGCMFDFGDFPYDQNKCSVNLFATDTMAEVQLQNLYNIPPTLSFGWEEQKMKRIISDFKILNVSASQFYYGSGNVSKTAPVTGFELGNTWSMLAVNVDFVRHSPYFWSTIVAPTLVCTMFIQVSFFAPTVSLAFVINLMAIYLEFMFLQDITIKIPLYLSKRPSSITLFHILLISNIVSAVFHGVLCALCSTKVPVPLPIRKIYAVKDYVPASWKEEGMVVDYACDTNWTEWTRTARPLAGLAMFVYFVIMFILYLVVRI
What is the function of this protein?
Thought to regulate endocytosis in coelomocytes through modulation of phospholipase C activity.  Possible acetylcholine receptor (By similarity).
What are the official names of this protein?
Acetylcholine receptor-like protein cup-4, Coelomocyte uptake defective protein 4.
What is the protein family that this protein belongs to?
Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily.
What are the subcellular locations of this protein?
Cytoplasmic vesicle membrane; Multi-pass membrane protein.
Protein: DXR_RHIL3
Sequence: MMTGKSAPRRLSIFGSTGSIGQNTLNVVDHLGGRENFEISVLTGSGNVELLARQAKSSGARLAVTANDRHYESLKSELSGTGIAVASGKSGLMEAADRDVDWVMAAIVGTAGLAPTLAAARRGADIALANKECLVSAGDLFIAAIREGGGRLLPVDSEHNAIFQVLEENQRHAVERVILTASGGPFRTASLRDMADVTVETARAHPNWSMGLKISIDSASMFNKALEMIEALHLFSLRPEQIEVIFHPQSIIHSMVGYTDGSVLAQLGAPDMRTAIGYALSFPRRPNLPVERLDFAKLARLDFEAPDEVRFPALRLARLAMTRGGVQGAVLNGAKEVALEAFIEGRLSFLAMAEVTERVMDDLAGLPQAAGMDDVFAADREARQRAAELMTLAIAE
What is the function of this protein?
Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
What are the official names of this protein?
1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXP reductoisomerase, 1-deoxyxylulose-5-phosphate reductoisomerase, 2-C-methyl-D-erythritol 4-phosphate synthase.
What is the protein family that this protein belongs to?
Belongs to the DXR family.
Protein: FITM2_XENTR
Sequence: MERLENCAQMFQRRFLNESFRRHCPVLLACIVLGGSLLKELCPLPDSYWNNKRNVLNVYFVKFSWGWTLWLLLPFIALTNYKLTRSTTKVLRRLSSLLVSTLIWYLCTNLFLYIENITGSCYESEAMSDPKEHQDRRECRLHSGYWHGFDISGHCFLLSYCILLILEETSIISNIRFERHWHRMAINAQFAALSILVIIWVWMFLCTAVYFHNIFQKVIGTAFGILAWYITYRWWYLQPISPGLPPASASRSGKEPIYRN
What is the function of this protein?
Fatty acyl-coenzyme A (CoA) diphosphatase that hydrolyzes fatty acyl-CoA to yield acyl-4'-phosphopantetheine and adenosine 3',5'-bisphosphate (By similarity).  Preferentially hydrolyzes unsaturated long-chain acyl-CoA substrates in the endoplasmic reticulum (ER) lumen (By similarity).  This catalytic activity is required for maintaining ER structure and for lipid droplets (LDs) biogenesis, which are lipid storage organelles involved in maintaining lipid and energy homeostasis (By similarity).  May directly bind to diacylglycerol (DAGs) and triacylglycerol, which is also important for LD biogenesis (By similarity).  May support directional budding of nacent LDs from the ER into the cytosol by reducing DAG levels at sites of LD formation (By similarity).  May play a role in the regulation of cell morphology, ER morphology and cytoskeletal organization (By similarity).
What are the official names of this protein?
Acyl-coenzyme A diphosphatase FITM2, Fat storage-inducing transmembrane protein 2, Fat-inducing protein 2.
What is the protein family that this protein belongs to?
Belongs to the FIT family. FIT2 subfamily.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein.
Protein: TOP1_AERPE
Sequence: MVAEKPKAAAKIAYALSDGRGVLRCSEYGVPYWIVRRDGAAIVVAPSAGHLFGPHTDSRGFPVFDFEWRPIFEFDRGAGYLSKFYRMLSRILPGASLYVNACDYDIEGSVIGFKIIEAFGDVNRARRMKFSTLAPQDIRRAYARMERLDVEMIEAGMARSEMDWLWGINVSRALMEAARRAAGRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEKGGGVFDARPHGWKPQSLETARSIKSELRKNPWLAVEEVRSERSILRPPPAFNLGDLQKEANRILGLPPLRTQSIAEELYLEALISYPRTNSQKLPPSINYRAILDKLAHGPLGREARELLKETGGVLRPVQGSKDDPAHPAIHPTGEKPSQRLSKEHMAVYELIVRRFLAAFSREAIVSKSSVLLRDFQGRVWRAEGLRVEDLGWLKYYHYSTPGEKPMPPLDRGDKARVVRVDVRVEWSQTPVRLDKASLLRWMESVNIGTEGTRARIIETLYKRGYLEGSRKSEVTPLGEAVAVIIQTLFPELSKPDLTRRFESMIEDIRSGRRTRQEVIDMSKKTISKLLESFLDRLDTAVREIGVSLGSVEVEAACHLCGRKAVSAVSGYRLCSHHMEAFDRLRKALPNLASTISSTPREALEAIARGRSRAGAWVRDVAALALRDDGLYKALL
What is the function of this protein?
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex.  Introduces a single-strand break via transesterification at a target site in duplex DNA.  The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand.  The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils.  Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.
What are the official names of this protein?
DNA topoisomerase 1, DNA topoisomerase I, Omega-protein, Relaxing enzyme, Swivelase, Untwisting enzyme.
What is the protein family that this protein belongs to?
Belongs to the type IA topoisomerase family.
Protein: PHYA1_TOBAC
Sequence: MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSSC
What is the function of this protein?
Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.  Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses.  Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductase, rRNA, etc.  It also controls the expression of its own gene(s) in a negative feedback fashion.
What are the official names of this protein?
Phytochrome A1.
What is the protein family that this protein belongs to?
Belongs to the phytochrome family.
Protein: RL14_CAMJ8
Sequence: MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGREVRYGGFMKIVSLAPEVL
What is the function of this protein?
Binds to 23S rRNA.  Forms part of two intersubunit bridges in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL14 family.
Protein: GPX2_YEAST
Sequence: MTTSFYDLECKDKKGESFKFDQLKGKVVLIVNVASKCGFTPQYKELEELYKKYQDKGFVILGFPCNQFGKQEPGSDEQITEFCQLNYGVTFPIMKKIDVNGSNADSVYNYLKSQKAGLLGFKGIKWNFEKFLVDSNGKVVQRFSSLTKPSSLDQEIQSLLSK
What is the function of this protein?
Glutathione peroxidase-like protein that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress (PubMed:10480913, PubMed:11445588).  Plays an important role in the oxidative stress-induced response in the presence of Ca(2+).  Has peroxidase activity using preferentially thioredoxin as a reducing power.  The redox state of the mitochondrial GPX2 is regulated by TRX1 and TRX2 (cytoplasmic thioredoxin), and by TRX3 (mitochondrial matrix thioredoxin) (PubMed:16251189).  Involved in sporulation (PubMed:21763276).
What are the official names of this protein?
Glutathione peroxidase-like peroxiredoxin 2, Glutathione peroxidase homolog 2, GPx 2.
What is the protein family that this protein belongs to?
Belongs to the glutathione peroxidase family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Mitochondrion outer membrane; Peripheral membrane protein; Cytoplasmic side. Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: MNME_CAMJR
Sequence: MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRHATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQIHGGFSVSEVLLEELVSLGARLALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTDLVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAIFRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS20_FRAP2
Sequence: MANSKQAKKRIIQAERNRQHNVARRSMMRTFLKKAAYAIEKGDVEAAKENFAKVVPILDKYASKGLIHKNKAARHKSRLSAKIKALSTAA
What is the function of this protein?
Binds directly to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS20 family.
Protein: RHAB_ECO8A
Sequence: MTFRNCVAVDLGASSGRVMLARYQRECRSLTLREIHRFKNGLHSQNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPEAMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA
What is the function of this protein?
Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose).  Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate.
What are the official names of this protein?
Rhamnulokinase, RhaB, ATP:L-rhamnulose phosphotransferase, L-rhamnulose 1-kinase, Rhamnulose kinase.
What is the protein family that this protein belongs to?
Belongs to the rhamnulokinase family.
Protein: RS19_SINMW
Sequence: MARSVWKGPFVDGYLLKKAEKVREGGRNEVIKMWSRRSTILPQFVGLTFGVYNGNKHVPVSVSEEMVGHKFGEFAPTRTYYGHGADKKAKRK
What is the function of this protein?
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S19.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
Protein: TRUA_BURO1
Sequence: MRIALGIQYDGAAFCGWQAQPHGKTVQDRLEHALAEFARVPLHTTVAGRTDTGVHGLGQVVHFDTDLEREVFSWVRGTNAFLPSTVSVQWAKPMPDTFHARFSAFERTYYYALYVHPVRSPMLAGRAGWIHTPLDDDAMRAAAAHLIGEHDFSSFRSSECQSKTPVKHLYQIDVRRAGHFIHFRFRANAFLHHMVRNLMGCLVAVGRGRYPADWLADVLAGRDRNLAAPTFMADGLYLAHVGYPAEFAVPPAQLGSVPWSSVWADLDPQT
What is the function of this protein?
Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase A, tRNA pseudouridine(38-40) synthase, tRNA pseudouridylate synthase I, tRNA-uridine isomerase I.
What is the protein family that this protein belongs to?
Belongs to the tRNA pseudouridine synthase TruA family.
Protein: APT_FRAAA
Sequence: MTSIDEAAPGRSAASDAAADVLRGHIRDIQDWPQPGVVFKDITPLLSTPAAFGVVVGALVDVARERGATTIAGIEARGFLLAAPVADRLGAALVPIRKQGKLPGPTRSATYDLEYGTATIEIHADAVRPDERVLLVDDVLATGGTAAAAHGLLAGVGAEVVGLAVLMELSFLPGRERVAPLDVVPLLTI
What is the function of this protein?
Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
What are the official names of this protein?
Adenine phosphoribosyltransferase, APRT.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UREF_PAEAT
Sequence: MSATYQLALQQLTDSALPTGAFAHSLGFESYIHRGLVRDESTFSTWLQAFVSQQLSYSDGLALRFLFEGVDVGLLDGVLSAQLLAREVREASLKMGGRLLEIGGEVFPSAELEAYRGLVRAGSASGHQPLAFGVIARSLGVPLEEALSAYLFATVTSLTQNAVRAIPLGQNAGQRVLRQAHDAVAAAIHVVAQLCWDDFGAVSPGLEISQMRHERQRARMFMS
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreF.
What is the protein family that this protein belongs to?
Belongs to the UreF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y178_METBF
Sequence: MSWIEPEVTKKPRRPMFLCVLSNTKTAHIPKLSAAGKTAELTDYTPAGDAELMDTGNIISVPVLPMTPPYDTPTPAIMTRSALKLTDAPYNFINSGLIVTPEVPCIDLKAKPGEDIRKPVAVYDVQGVYERAKFLGKRLRNQVDHVVIGESIPGGTTTAMGVLMALGYNGNVSSSADENPLKLKKQVIEEGLKASGLTFGCLKDDPMKAIACMGDPMMPAVIGLVAGFQSTDVSIVLAGGTQMAAVYALIKHLGFNTEKLAIATTRYVVEDKSANFIELTRILGVPAVYVADPGFGKSELKGLHRYETGTIKEGAGAGGAMYLAGLYGISQDEFRSEVENVCKLLKAGH
What are the official names of this protein?
UPF0284 protein Mbar_A0178.
What is the protein family that this protein belongs to?
Belongs to the UPF0284 family.
Protein: TGT3A_ARATH
Sequence: MDRRNPFQHHHHHHQLHHHLIQQQQLPPPPLSTTATMDPGGGGGGGERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREEERRLREEARAQKRDSLIDALLNRLNRDHNDDHHNQGF
What is the function of this protein?
Probable transcription factor that binds specifically to the core DNA sequence 5'-GTTAC-3'.
What are the official names of this protein?
Trihelix transcription factor GT-3a, Trihelix DNA-binding protein GT-3a.
Protein: SRRT_DROGR
Sequence: MAESDDEYDRKRRDKFRGERDSYRPERRDDRRPMGGGAGNARDEWAERNPFRGSAAAGGGGGGGGVGGGGGARHRPDYSDYRGSGPRPRYGSPGREMPPAKRMRPDWGDGEMRANPRFGYDPYLVQAWNDHYQSLHSAYSHSGHAPSAREPPPSGISNSDTQTQPAMLTLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRRSDEQRGFLKRRTDVFLELLNNGTISNVKVDSSQADALVRVLDTCVIKLEGGTDEDLKILDEKPKDPAPVYERRSERSERSEATESVVVTKREPESPKHQTKSEKDDDDLPEVESPQRKNVRPVNSDDEDWDDDEEMPAAKSEQQSELAAEKPAKQLNDEESMQANIDKNQKKSKKRKRTSSDDESSSSSSSESDSDSDDEKLIEKYDVEEGLRADQKAEAEKDKEEEEERAATAAAKAKQLPPDSPTPDEDVDAAAVEEQKNEVVAIKTEVNDEESQKTEQPAAEEEKSEQPKDDPEASSKNGEENEEEKAEKSEADTATTKAAAAAADDDAMTETIDVDKLKDSLKPRALHRTSSIFLRNLAPSITKAEIETICTRFSGYLRVAIADPLVERRWYRRGWITFTRDVNIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQIVRSDIKLCAKIAMNLDERFKLWSEVDNADNAELNPEELKEATNGSGSYGFNSKNPVLQNITDYLIEEASAEEEELLGLAGDSKDGEGEPIERDEPLIQVLDRLVLYLRVVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKSYEGKLQQFLAKTVQLSDENIKELGAKNPEKEVEKFVQANTQELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKEVQYFNNYLRDPKRPQLPEHPGSSKRTESESGRGSGGYRPPMYPPFSAMPYGFAPPMMGGGGRGGRNFPQARREMPVEHQRRLIGYHDLDAPVNSDMFD
What is the function of this protein?
Acts as a mediator between the cap-binding complex (CBC) and RNA-mediated gene silencing (RNAi).  Involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production.  Also involved microRNA (miRNA)-mediated silencing by contributing to the stability and delivery of primary miRNA transcripts to the primary miRNA processing complex containing drosha and pasha (By similarity).
What are the official names of this protein?
Serrate RNA effector molecule homolog, Arsenite-resistance protein 2 homolog.
What is the protein family that this protein belongs to?
Belongs to the ARS2 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RECR_CLOAB
Sequence: MEFYPVAIEKLIEEFAKLPGVGYKTAQRLTMHVLNLPKEEVEGFADALKKARGTIKYCSVCGNYTDTDPCAICSNPNRDKSLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRELVSRMNGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGIPVGGDLEYADEVTLAKALEGRREI
What is the function of this protein?
May play a role in DNA repair.  It seems to be involved in an RecBC-independent recombinational process of DNA repair.  It may act with RecF and RecO.
What are the official names of this protein?
Recombination protein RecR.
What is the protein family that this protein belongs to?
Belongs to the RecR family.
Protein: ALGF_PSEFL
Sequence: MTFTTTPRRLAKTLALAAGMSVVSLSAFAGDAALYGPVAPKGSSFVRVYNASNQEVSATVGSTNLSEVAPLASSDFSFMPGGDYSAKIGSQTVPVKLAADHYYTLVNNSSGQPQLIEEPPFKNKQKSLVRVQNLSDKALTLKTADGKTDVVKSVAAKGRGEREINPVKVSLALYDGDKKVGDVKPVALERGEAAVLYVTGSGSSISPVWVKRPVSTR
What is the function of this protein?
Together with AlgI and AlgJ, forms an inner membrane complex which probably interacts with the alginate polymerization-transport complex and adds acetyl groups at the O-2 and O-3 positions of mannuronate residues.  Acetylation of alginate is important for the architecture of biofilms and increases the ability of alginate to act as a defense barrier (By similarity).
What are the official names of this protein?
Alginate biosynthesis protein AlgF.
What is the protein family that this protein belongs to?
Belongs to the AlgF family.
What are the subcellular locations of this protein?
Periplasm.
Protein: UREE_YERPP
Sequence: MILIEHILGNVKKDPVWREKLKDATFDLLILDQREAQKSRCRKSSTQGLDLGISLDRNVVLADGDVLAWDEETNVAVVVQINLRDVMVIDLSELKSRSPDELIKTCFELGHALGNQHWKAVTKHNEVYVPLTVATTMMDSVMRTHGFQHLPFRFVKGAEILPLLTNSEARLLFGGAEDTDTHVHVASPLDEPHGSGLHIHGIHSHEEGHSHGDHDHDHSHSHGDHDHDHKH
What is the function of this protein?
Involved in urease metallocenter assembly.  Binds nickel.  Probably functions as a nickel donor during metallocenter assembly.
What are the official names of this protein?
Urease accessory protein UreE.
What is the protein family that this protein belongs to?
Belongs to the UreE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y3708_BACCQ
Sequence: MGFPKVERLLINYKTLDEFKKFKGCGAQELSMLEELQANIIENNSESPFYGIYYGGSLIARMSLYMKRNGGEPFEITGTYLELYKLEVLPTFQKQGFGEMLVNYAKGLQFPIKTIARIHSAGFWDKLNFQPVSVPDGDFYVWHPETNLNAVTNEESA
What are the official names of this protein?
Uncharacterized N-acetyltransferase BCQ_3708.