PharMolix/UniProtQA huggingface dataset:
Protein: TSAD_SYNFM
Sequence: MIILGVESSCDETAAAVVEDGSRVLSDVVASQAALHGPYGGVVPELASRKHVEAILPVLGEAMHEAGVTWGQVDAIAATQGPGLVGALLVGLSAAKALAYALKKPMVAVNHLEGHIQAAFLGREELTRPFVCLVVSGGHTALYRVDPDGTTSFLGSTRDDAAGEAFDKVAKLLALGYPGGVEIERLAAGGDPHAFNFPRAFIDGRSLEFSFSGLKTSVATFVRQHGPPSESGEQGAYRLADLLASFQEAVVEVLVNKTVRAAGMCSVGDIAVVGGVAANLRLRERFEEEAGMHRFELHLPARRYCTDNAVMIAAAAYRTWKRSGFCLDPVDLDARSRWF
What is the function of this protein?
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.  Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB.  TsaD likely plays a direct catalytic role in this reaction.
What are the official names of this protein?
tRNA N6-adenosine threonylcarbamoyltransferase, N6-L-threonylcarbamoyladenine synthase, t(6)A synthase, t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD, tRNA threonylcarbamoyladenosine biosynthesis protein TsaD.
What is the protein family that this protein belongs to?
Belongs to the KAE1 / TsaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: COTP_BACSU
Sequence: MDFEKIRKWLEITNEYKQSDFWTNVLKYKAPEHFFDSEASTFVYDFYQDEEYNFIIVEMPGVYEEELTIRLLSKTQLLIKGTITPVFPAEMEVLRERYYGEIERIIQLPEAAETHLLQIQLLNGLLHISYPRQVETVAFNKGL
What are the official names of this protein?
Spore coat protein P.
What is the protein family that this protein belongs to?
Belongs to the small heat shock protein (HSP20) family.
Protein: RPOZ_POLNA
Sequence: MARITVEDCLEKIPNRFQLVLAATYRARMLSQGHAARIESKNKPAVTALREIAAGKVGLEMLKKVPN
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: NUOK_BACCZ
Sequence: MSSVPASAYLTLAIILFCIGLFGALTKRNTVIVLVCIELMLNAANLNLVAFSKLGLFPNVTGQIFSLFTMAVAAAEAAVGLAILIALYRNRTTVHVDEMDTLKG
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit K, NADH dehydrogenase I subunit K, NDH-1 subunit K.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 4L family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: DAPD_COXBU
Sequence: MTDLKTIIEEAYQNKDNFTTDTVPKKIHQAIHQTIELLDNGELRIAEKQNGQWNTNEWAKMAILLYFKTEPLKTFDAGYTFFYDKIPLKYTNNTSQPQSGVRVVPHAIVRKGAYLAPNTVLMPSYINIGAYVDSGTLIDTWATVGSCAQIGKNVHLSGGAGIGGVLEPLQAHPTIIEDDCFIGARSEIVEGVMVEKGSVISMGVFVGQSTPIYNRQTQEITYGRIPAGSVVIPGSLPSKDGHYNRYSAIIVKQVDKKTRSKVSLNELLREG
What are the official names of this protein?
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, Tetrahydrodipicolinate N-succinyltransferase, THDP succinyltransferase, THP succinyltransferase, Tetrahydropicolinate succinylase.
What is the protein family that this protein belongs to?
Belongs to the transferase hexapeptide repeat family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AROC_STRA1
Sequence: MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIVVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: MURE_LISMF
Sequence: MKLNELMQAIPVFTGEASETIEISHIAQDSRKVKPGTLFICIDGELVDGHQFASRAVELGAVAIIAEKQLDVSIPVIYVRDSKRAMAMLADYFYGSPTQALKLVGITGTNGKTTVSHLVEQIVRENGEQTGLIGTMYRKIGDQILETKNTTPDSLTLQETFRDMLLSGVSTAVMEVSSHALVQGRVYGSDYDVAVFMNLSQDHLDYHHTMEEYANAKSLLFAQLGNSYHTSNPKIAVLNADDEESVRMQKATAAHVITFGIKQQADFKANNIRITSHGSTFDLRTPIGNFTLKIKMIGNFSVYNVLAAIATSFALHIPMEKAIKTVESIPGVKGRFELVHAGQEFPVIVDYAHTPDGLLNVLETIAEFAEKRVFVVVGCGGDRDKGKRPQMAKIAVDYATNPIFTSDNPRSENPRAIIEDMIQGVPYSDSYVVHENRRDAIRFAVNEAEAGDVILIAGKGHEDYQVIGDEVIDFDDRVEARIAIEKKLGLA
What is the function of this protein?
Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
What are the official names of this protein?
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase, Meso-A2pm-adding enzyme, Meso-diaminopimelate-adding enzyme, UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase, UDP-MurNAc-tripeptide synthetase, UDP-N-acetylmuramyl-tripeptide synthetase.
What is the protein family that this protein belongs to?
Belongs to the MurCDEF family. MurE subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL1_STRM5
Sequence: MAQTKREKAIKAAVVPGKAYAFEDAINILKTATKAKFVESIDVSVRLGVDAKKSDQQVRGSTVLPAGTGKSVRVAVFAPAGAKADEALAAGAEAVGMDDLAEKMQAGDLNYDVVIATPDAMRVVGKLGTVLGPRGLMPNPKVGTVSPNPGEAVKNAKSGQVRYRTDKAGIIHCTIGKADFAEDALKSNLTALLLDLIKAKPATSKGTYLQKVSVSSTMGPGVTVDQSSLTLK
What is the function of this protein?
Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.
What are the official names of this protein?
50S ribosomal protein L1.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL1 family.
Protein: SLYA_ECOSM
Sequence: MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLIKLIAKLEHNIIELQAKG
What is the function of this protein?
Transcription regulator that can specifically activate or repress expression of target genes.
What are the official names of this protein?
Transcriptional regulator SlyA.
What is the protein family that this protein belongs to?
Belongs to the SlyA family.
Protein: PKRI1_XENTR
Sequence: MAAETGTAKPARAKKEPQPLVIPKNATDEQRLRLERLMRNPDKLAAIPERPKEWSPRSAPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQEFLDRVSEKHNLDDDFQRKLMENKKLEEEKTAKRRLKRQKLKEKKKMAKMAKKEEKKEEIEKHVELDNSPESSDKSDLEDQ
What is the function of this protein?
Required for pre-mRNA splicing as component of the spliceosome (By similarity).  Binds double-stranded RNA (By similarity).
What are the official names of this protein?
PRKR-interacting protein 1 homolog.
What is the protein family that this protein belongs to?
Belongs to the PRKRIP1 family.
What are the subcellular locations of this protein?
Nucleus. Nucleus, nucleolus.
Protein: RS15_DICTD
Sequence: MALTKEEKRQIIEKFRLNENDSGSPEVQIALLTERIKKLTEHLKVHKKDYHSRVGLLKMIGRRRKLLKYLQEKDFERYKKLIQELGLRK
What is the function of this protein?
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
What are the official names of this protein?
30S ribosomal protein S15.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS15 family.
Protein: G1L6_ORYSJ
Sequence: MDRHHHHHHHHHHHMMSGGGQDPAAGDGGAGGATQDSFFLGPAAAAMFSGAGSSSSGAGTSAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGSPPPPGGSASGGGDTSASPQFIIP
What is the function of this protein?
Transcription factor required for lateral development of the lemma and palea (PubMed:22203474, Ref. 9, PubMed:23526395, PubMed:25224972, PubMed:26486996, PubMed:29057928, PubMed:30725309).  Involved in the regulation of grain hull development (PubMed:23526395).  Possesses transactivation activity in yeast, and may determine grain shape and size by modifying gene expression in the grain hull (PubMed:23526395).  Regulates the expression of cell proliferation and expansion related genes (PubMed:26486996).  Acts as transcriptional repressor and regulates cell expansion during the lateral development of spikelet (PubMed:29057928).  May act upstream of hormone-related genes and starch and sucrose metabolism-related genes, which may be responsible for lemma and palea development, and grain filling, respectively (PubMed:30725309).  Does not seem to function at stages of floral-organ initiation and patterning (Ref. 9).
What are the official names of this protein?
Protein G1-like6, OsG1L6, Protein ABNORMAL FLOWER AND DWARF 1, Protein BEAK LIKE SPIKELET 1, Protein BEAK-SHAPED GRAIN 1, Protein TRIANGULAR HULL 1.
What is the protein family that this protein belongs to?
Belongs to the plant homeotic and developmental regulators ALOG protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: TGB3_PVMR
Sequence: MIVYVLVGLSAFCIVLYLISQGQSDCVVLITGESVRVQGCRIDGEFGSVLSKLKPFGCGSFRS
What is the function of this protein?
Plays a role in viral cell-to-cell propagation, by facilitating genome transport to neighboring plant cells through plasmosdesmata.  May induce the formation of granular vesicles derived from the Endoplasmic reticulum, which align on actin filaments (By similarity).
What are the official names of this protein?
Movement protein TGBp3, 7 kDa protein, Triple gene block 3 protein, TGBp3.
What is the protein family that this protein belongs to?
Belongs to the Tymovirales TGBp3 protein family.
What are the subcellular locations of this protein?
Host endoplasmic reticulum membrane.
Protein: ISPD_PROM2
Sequence: MHFLIPAAGSGSRMKAGKNKLLIDLEGESLIYWTLKSVFSASSTNWVGIIGQPKDKNLLLNSAKDFAHKVHWINGGDTRQQSVFNGLKALPKDAEKVLIHDGARCLINPELIDLCAKQLDENEAVILATKVTDTIKIVDNEGFIKETPDRNHLWAAQTPQGFLVDRLIKAHKMAIDKNWTVTDDASLFEILNWKVKIVEGAYSNIKITSPIDLKIAKLFVKDP
What is the function of this protein?
Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
What are the official names of this protein?
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, MEP cytidylyltransferase, MCT.
What is the protein family that this protein belongs to?
Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
Protein: RPOZ_RHOPT
Sequence: MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSPLTIDRDNDKNPVVSLREIADQTISPEDLKEELVHSLQKFVEVDEPEPDTVPLIGSAGASVDADDTEVAMERMTEEELLKGLEGLAPPEEQPEEDE
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: RS18_SYNY3
Sequence: MNYYRKRLSPLPPNQPIDYKDTELLRKFITERGKILPRRITGLTAKQQRDLTTAVKRSRLVALLPFVNKEI
What is the function of this protein?
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S18.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS18 family.
Protein: PDIA1_RAT
Sequence: MLSRALLCLALAWAARVGADALEEEDNVLVLKKSNFAEALAAHNYLLVEFYAPWCGHCKALAPEYAKAAAKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLSDTAAAESLVDSSEVTVIGFFKDAGSDSAKQFLLAAEAVDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEITKEKLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKKAAEGFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITQFCHHFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGAGDNDDLDLEEALEPDMEEDDDQKAVKDEL
What is the function of this protein?
This multifunctional protein catalyzes the formation, breakage and rearrangement of disulfide bonds.  At the cell surface, seems to act as a reductase that cleaves disulfide bonds of proteins attached to the cell.  May therefore cause structural modifications of exofacial proteins.  Inside the cell, seems to form/rearrange disulfide bonds of nascent proteins.  At high concentrations and following phosphorylation by FAM20C, functions as a chaperone that inhibits aggregation of misfolded proteins.  At low concentrations, facilitates aggregation (anti-chaperone activity).  May be involved with other chaperones in the structural modification of the TG precursor in hormone biogenesis.  Also acts as a structural subunit of various enzymes such as prolyl 4-hydroxylase and microsomal triacylglycerol transfer protein MTTP.  Receptor for LGALS9; the interaction retains P4HB at the cell surface of Th2 T helper cells, increasing disulfide reductase activity at the plasma membrane, altering the plasma membrane redox state and enhancing cell migration.
What are the official names of this protein?
Protein disulfide-isomerase, PDI, Cellular thyroid hormone-binding protein, Prolyl 4-hydroxylase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the protein disulfide isomerase family.
What are the subcellular locations of this protein?
Endoplasmic reticulum. Endoplasmic reticulum lumen. Melanosome. Cell membrane; Peripheral membrane protein. Note=Highly abundant. In some cell types, seems to be also secreted or associated with the plasma membrane, where it undergoes constant shedding and replacement from intracellular sources. Localizes near CD4-enriched regions on lymphoid cell surfaces. Colocalizes with MTTP in the endoplasmic reticulum.
Protein: SSRP_IDILO
Sequence: MSKKKPQQSSNTIARNKKARHEYFLEDKFEAGVSLQGWEIKSIRAGKVNISDSYVIIKNGEAYLLGAEIQPLNQASSHVYCEPDRSRKLLLKRRELDKLIGASEREGYSIVATTIYWKGPWAKLEIFLAQGKKSHDKRDTIKERDWQRQKARIMKHSVR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: Y1128_MYCTU
Sequence: MCSTREEITEAFASLATALSRVLGLTFDALTTPERLALLEHCETARRQLPSVEHTLINQIGEQSTEEELGGKLGLTLADRLRITRSEAKRRVAEAADLGQRRALTGEPLPPLLTATAKAQRHGLIGDGHVEVIRAFVHRLPSWVDLKTLEKAERDLAKQATQYRPDQLAKLAARIMDCLNPDGDYTDEDRARRRGLTLGKQDVDGMSRLSGYVTPELRATIEAVWAKLAAPGMCNPEQKAPCVNGAPSKEQARRDTRSCPQRNHDALNAELRSLLTSGNLGQHNGLPASIIVTTTLKDLEAAAGAGLTGGGTILPISDVIRLARHANHYLAIFDRGKALALYHTKRLASPAQRIMLYAKDSGCSAPGCDVPGYYCEVHHVTPYAQCRNTDVNDLTLGCGGHHPLAERGWTTRKNAHGDTEWLPPPHLDHGQPRVNTFHHPEKLLADDEGDP
What are the official names of this protein?
Uncharacterized protein Rv1128c.
What is the protein family that this protein belongs to?
Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family.
Protein: HAK5_ORYSJ
Sequence: MTEPLHTSSNGGAERGPNAAFESEKTLQTTTRLQRFDSLHMEAGKIPGGQSHTAKVGWATTLHLAFQSIGVVYGDMGTSPLYVFSSTFTNGIKDTNDILGVMSLIIYTVVLLPLIKYCFIVLRANDNGDGGTFALYSLISRYARISLIPNQQAEDAMVSHYKLESPSNRVKRAHWIKEKMENSPNFKIILFLVTILATSMVIGDGVLTPCISVLSAVGGIKESAKSLTQGQIAGIAIAILIVLFLVQRFGTDKVGYSFGPIILTWFIFIAGTGVYNLFKHDTGVLKAFNPKYIVDYFERNGKQGWISLGGVILCITGTEAMFADLGHFNVRAIQIGFSVVLLPSVLLAYIGQAAYLRIYPEHVADTFYKSIPDPLYWPTFVVAVAAAIIASQAMISGAFAIIAQSQILGCFPRVRVIHTSTKFHGQVYIPEINYVLMVLCVAVTAIFQTTDKIGNAYGIAVVFVMFITTLLVTLVMVMIWKTSLLWIALFPVIFGGAELIYLSSAFYKFTQGGYLPLVFSAILMFIMATWHYVHVHRYKYELRNKVSNNYVAELAVKQNLARLPGIGFLYSELVQGIPPILPHLVEKVPSIHSVLVIISIKYLPISKIETKERFLFRYVEPKEYRVFRCVVRYGYNDKVEDPAEFESLVIENLKQFIHEESLYSQSSHSLEGESIKEIGGVTDPTSEVQDAMSSRNNSDQHTTEPRNGCMDEIQSIHKEMGNGVVHLLGETNVVAEPNADFLKKIIVDYVYNFIRKNFRQPEKITCVPHNRLLRVGMTYEI
What is the function of this protein?
High-affinity potassium transporter.
What are the official names of this protein?
Potassium transporter 5, OsHAK5.
What is the protein family that this protein belongs to?
Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: AROC_POLNA
Sequence: MSGNTFGNLFAVTNFGESHGPAIGCVIDGCPPGMALSEADIQGDLDRRRPGTSRHVTQRNEPDAVEILSGVYEGKTTGTPICLLIKNTDQRSKDYGNILDTFRPGHADYTYLHKYGLRDPRGGGRSSARLTAPMVAAGAVAKKWLFEKYGTTFRGCMAQIGEAMIPFESWEHVANNPFFAPVADVSNLENYMDALRKAGDSCGARIRVVASGVPVGLGEPLFDKLDADIAFAMMGINAVKGVEIGAGFASVTQRGTTHGDSLSPEGFMSNNAGGVLGGISTGQDLEVSIAIKPTSSIITPRQSIDTAGNPAEVVTKGRHDPCVGIRATPIAEAMLALVVMEHALRQRAQCGDVKVSTPDIMRSRG
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: URE2_RHIME
Sequence: MIPGEIIAAAGEIELNAGLETVSIEVANSGDRPVQVGSHYHFAETNPGLIFDRDAARGKRLDIPAGTAVRFEPGQTRQVTLIPLSGKREVFGFRQQVMGKL
What are the official names of this protein?
Urease subunit beta, Urea amidohydrolase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the urease beta subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYM_CHLCV
Sequence: MPSRVLITSALPYANGPLHFGHIAGAYLPADVYARFRRLLGDDVLYICGSDEYGIAITLNAERVGLGYQEYVSMYHKVHKDTFDKLGISLDFFSRTTNPFHKAIVEDFYLELKSKGLVENQISFQLYSEDEKRFLADRYVEGTCPKCGFDGARGDECQKCGADYEATDLINPRSKLSGSQLVLKETEHAYFHLERMVEPLLAFIEKAYLPEHIRKFVVDYIKNLRPRAITRDLSWGIPVPDFPNKVFYVWFDAPIGYISATMDWAASVNTPDLWKDFWLEESTEYVQFIGKDNIPFHAAIFPAMELGQSIPYKKMNALISSEFYLLEGAQFSKSEGNFVDMDAFLDTYSLDKLRYVLAATAPETSDSEFTFLDFKTRCNSELVGKFGNFINRVLAFAEKNGFRELTCPEALEDKDRQFLDDCQRIVQEAQAYYSKYSLRKACSAIMELAALGNVYFNDQAPWKLLKEGFAHRVEAILFCACYCQKLLALIAYPILPGTAWEIWNMLAPKSLDLENQDKDRVKNLWNTEFIDFSDEVFSLTTPQLLFTIVD
What is the function of this protein?
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
What are the official names of this protein?
Methionine--tRNA ligase, Methionyl-tRNA synthetase, MetRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AROC_GLAP5
Sequence: MAGNSIGQLFKVTTFGESHGIALGCIVDGVPPNMELSEADLQPDLDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGLIIKNGDQRSKDYGDIMDKFRPGHADYTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLKEQFGVEIRGYLSQIGSVKIDPQTVANIEQIDWQQVNSNPFFCPDPVAVEQFDELIRELKKEGNSIGAKLTVIAENVPVGLGEPVFDRLDADLAHALMSINAVKGVEIGDGFAAVEQKGSEHRDEMTPEGFCSNHSGGILGGISSGQPIIAHIALKPTSSITVPGKSVNVHNEPVEVVTKGRHDPCVGIRAVPIAEAMMAIVVLDHLLRFKAQCR
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: URE1_BRADU
Sequence: MMSVKIKRSVYADMFGPTTGDKVRLADTDLIIEVEKDFTVYGEEVKFGGGKVIRDGMGQSQVTNKQGAADTVITNALIVDHWGIVKADVAIKDGMISAIGKAGNPDIQPGVTIIIGPGTDVIAGEGKILTAGGFDSHIHFICPQQIEHALMSGVTSMLGGGTGPSHGTFATTCTPGPWHMGRMIQSFDAFPVNLGISGKGNASRPAPLVEMIKGGACALKLHEDWGTTPAAIDNCLSVADDYDIQVMIHTDTLNESGFVEDTIKAFKGRTIHAFHTEGAGGGHAPDIIKVAGLKNVLPSSTNPTRPFTRNTIDEHLDMLMVCHHLDPSIAEDLAFAESRIRKETIAAEDILHDLGALSMMSSDSQAMGRLGEVIIRTWQTADKMKKQRGSLPQDKGKDNDNFRVKRYIAKYTINPAIAHGVSKLIGSVEKGKLADLVLWSPAFFGVKPDCIVKGGTIVAAPMGDPNASIPTPQPVHYQPMFGAFGKARTASSVVFTSKAAITGGLARKLGIEKKLYAVQNTRGRISKKSMIHNDATPNIEVDPETYEVRADGELLTCAPAEVLPMAQRYFMY
What are the official names of this protein?
Urease subunit alpha, Urea amidohydrolase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RPIA_BACMK
Sequence: MMNLKQLAGEYAAGFVRDGMTIGLGTGSTVYWTIQKLGHRVQEGLSIQAVPTSKETEVLAKQLSIPLISLNEIDILDLTIDGADEINNDLQLIKGGGGALLREKIVATSSKELIIIADESKLVSHLGTFPLPIEIISFSWKQTEKRIQSLGCETHLRMKDSRPFITDNGNLIIDCIFPNKILNPNDTHTELKMITGVVETGLFINMKSKAIIGTKNGIKEY
What is the function of this protein?
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
What are the official names of this protein?
Ribose-5-phosphate isomerase A, Phosphoriboisomerase A, PRI.
What is the protein family that this protein belongs to?
Belongs to the ribose 5-phosphate isomerase family.
Protein: YOKJ_BACSU
Sequence: MSIDMLIKKIASTSDCRLFEADGLPVIDEKHQLPKDISEFYEQCGGAVLYENADYPIYIVRPAEFELANPIIVGELCEEDISSEWYIVCTDGKGEYLTIDLNDQRKGKCYDSFFDRHGIVGETQVIASSFTDLIQRLLENKGKHWYWLRDDYVSLGDAYDGIEIE
What is the function of this protein?
Immunity component of one of 6 LXG toxin-immunity modules in this strain.  They promote kin selection, mediate competition in biofilms, and drive spatial segregation of different strains, indicating that LXG toxins may help avoid warfare between strains in biofilms.  Mediates intercellular competition during biofilm formation; disruption of the operon disadvantages the bacteria, but overexpression of the cognate immunity protein restores growth in competition with wild-type.  In situ neutralizes the toxic effect of cognate toxin YokI (PubMed:34280190).  Neutralizes the ability to inhibit growth of cognate toxin YokI upon expression in E. coli.  Does not have immunity protein activity on other LXG toxins (PubMed:22200572).
What are the official names of this protein?
Immunity protein YokJ, SPbeta prophage-derived uncharacterized YokJ.
What are the subcellular locations of this protein?
Cytoplasm.