PharMolix/UniProtQA huggingface dataset:
Protein: ACSA_STRAW
Sequence: MSNESLANLLKEERRFAPPADLAANANVTAEAYEQAKADRLGFWAEQARRLTWATEPTETLDWSNPPFAKWFKDGKLNVAYNCVDRHVEAGHGDRVAIHFEGEPGDSRAITYAELKDEVSKAANALTELGVQKGDRVAVYLPMIPEAVVAMLACARIGAAHSVVFGGFSADAIAARIKDADAKLVITADGGYRRGKPSALKPAVDDAVSRGDGVEKVLVVRRTGQEVAWTEGRDVWWHEITAKQSAEHTPEAFDAEHPLFILYTSGTTGKPKGILHTSGGYLTQTSYTHHAVFDLKPETDVYWCTADIGWVTGHSYITYGPLSNGATQVMYEGTPDTPHQGRFWEIVQKYGVTILYTAPTAIRTFMKWGDDIPAKFDLSSLRVLGSVGEPINPEAWIWYRKHIGGDRTPIVDTWWQTETGAMMISPLPGVTETKPGSAQRPLPGISATVVDDEAREVPNGGGGYLVLTEPWPSMLRTIWGDDQRFLDTYWSRFEGKYFAGDGAKKDEDGDIWLLGRVDDVMLVSGHNISTTEVESALVSHPSVAEAAVVGAADETTGQAIVAFVILRGTANAEDDNLVADLRNHVGTTLGPIAKPKRILPVAELPKTRSGKIMRRLLRDVAENRALGDVTTLTDSSVMDLIQSKLPAAPSED
What is the function of this protein?
Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways.  AcsA undergoes a two-step reaction.  In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate.  In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
What are the official names of this protein?
Acetyl-coenzyme A synthetase, AcCoA synthetase, Acs, Acetate--CoA ligase, Acyl-activating enzyme.
What is the protein family that this protein belongs to?
Belongs to the ATP-dependent AMP-binding enzyme family.
Protein: NUOK1_SOLUE
Sequence: MMNAVPISWFLTLSAILFALGVAGFLFRRNIITVFMSIELMLNAVNLSFVTFSYQHKEVAGHLFTFFVMVVAAAEAAVGLAIILTVFKNRSTLNIDDVNSMKN
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit K 1, NADH dehydrogenase I subunit K 1, NDH-1 subunit K 1.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 4L family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: DHAS_STRMU
Sequence: MGYTVAIVGATGAVGTRMIQQLEQSTLPVDKVRLLSSSRSAGKVLQYKDQDVTVELTTKDSFEGVDIALFSAGGSVSAKFAPYAVKAGAVVVDNTSHFRQNPDVPLVVPEVNAYAMDAHNGIIACPNCSTIQMMVALEPIRQKWGLSRVIVSTYQAVSGAGQSAINETVREIKEVVNDGVDPKAVHADILPSGGDKKHYPIAFNALAQIDVFTDNDYTYEEMKMTNETKKIMEEPELPVSATCVRVPILFSHSEAVYIETKDVAPIEEVKAAIAAFPGAVLEDDIKHQIYPQAANAVGSRETFVGRIRKDLDIENGIHMWVVSDNLLKGAAWNSVQIAESLHERGLVRSTSELKFELK
What is the function of this protein?
Catalyzes the NADPH-dependent formation of L-aspartate-semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl-4-phosphate.
What are the official names of this protein?
Aspartate-semialdehyde dehydrogenase, ASA dehydrogenase, ASADH, Aspartate-beta-semialdehyde dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the aspartate-semialdehyde dehydrogenase family.
Protein: TRHO_SACD2
Sequence: MPQIVIAALYKFVSLPDFEALREPLQAFCIENEIKGTLLLAQEGINGTVAGRREAIDALLAYFGKDARLADIDHKESYEEEQPFYRMKVKLKKEIVTMGVEGIDPNNIVGTYVEPKDWNSLIDDPEVIVVDTRNNYEYDIGTFEGALNPNTESFRELPEYVAKNLDPAKHKKVAMFCTGGIRCEKSTAFMKQRGFEEVYHLKGGILKYLEEVPEEQTRWKGECFVFDNRVAVNHALEKGTYDLCHGCRYPITEEDKKSEKYIEGVACPHCHDTQTPDQRARFMERQKQVQLAKARKQAHIGAPAPSRQK
What is the function of this protein?
Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.
What are the official names of this protein?
tRNA uridine(34) hydroxylase, tRNA hydroxylation protein O.
What is the protein family that this protein belongs to?
Belongs to the TrhO family.
Protein: MURG_BACP2
Sequence: MRIVISGGGTGGHIYPALAFIKEVKRLHPDVEFLYIGTENGLEKKIVERENIPFKAIEISGFKRKLSFDNVKTVMRFLKGVQKSKSYLKEFKPDAVIGTGGYVCGPVVYAASKLKIPTIIHEQNSLPGITNKFLARYVNKVAICFDEAKAHFPSEKVVFTGNPRASEVVSIKEGKSLKEFGLDENKKTVLIFGGSRGAAPINRAVIEMQEGLKAKNYQLLYITGEVHYEKVLNELKEKGLASNMITKPFLHQMPEYLKSIDVIVARAGATTIAEVTALGIPTIFIPSPYVTANHQEINARSLEKHDAAIVLRESELTGDRLLHAIDEIAGNEEKLNQMSRLTKELGVPDAATRLYNVLKEITTT
What is the function of this protein?
Cell wall formation.  Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).
What are the official names of this protein?
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 28 family. MurG subfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: Y4977_DELAS
Sequence: MTHWTHPTEFRQEVRAGRFRGQTAGQCPGYTQGNLAILPRECSEEFLRFARLNPKSCPLIGVTEPGSSRVPELGDIDLKTDLPSYWVFRDGHRAEQVNDLTDLWRDDLVGFVIGCSYSFEDALRDAGVPVRHIDEGRGAPMFITDIANGQAGRFGGRMVVSMRPMTAAQAIRAIQVTSRFPSVHGAPVHLGDPAQIGIADIERPDFGEPMALKPGEIPVFWACGVTPQQAIRSAALPFAITHEPGHMLVTELRNSHLAAF
What are the official names of this protein?
Putative hydro-lyase Daci_4977.
What is the protein family that this protein belongs to?
Belongs to the D-glutamate cyclase family.
Protein: ITPK2_SOYBN
Sequence: MSESEVAGQRYRVGYALQGKKVESFIQPSLLDHAKQHSIDLVQIDPTAPLQQQGPFHCIIHKLHTQHWKNLLQQFSSKHPNTVIIDPPELVDRLHNRVSMLDAVTHLQFSLENATIGVPKQVVVNEPKSFDLHKFEEEQGLRFPVIAKPLAADGGAGSHELCLVFDEEGLHALSVPMVLQEFVNHGGVVFKIYVAGQRVNCVKRKSLGDITEEKLKVLRGSLPFSRVSSLGVEDEGGGAVEDAEMPPQSLVGELARGLREALGLNLFNVDVIRDGKEPTRYLVIDINYFPGYAKLPSYEPFITDFLLDIVRSKTA
What is the function of this protein?
Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4, Ins(3,4,6)P3 and Ins(1,3,4)P3 (PubMed:18474240).  May participate in an inositol lipid-independent pathway of InsP6 synthesis (PubMed:18474240).  Barely able to add a beta-phosphate to InsP6 to yield 5-InsP7, thus exhibiting negligible InsP6 kinase activity (PubMed:35635723).  Has also Ins(1,3,4,5,6)P5 phosphatase activity (PubMed:35635723).  Probably involved in the regulation of drought and salinity tolerance by diverting the flux of inositol phosphate pool towards phytate biosynthesis (PubMed:29289899).
What are the official names of this protein?
Inositol-tetrakisphosphate 1-kinase 2, GmItpk2, Inositol 1,3,4-trisphosphate 5/6-kinase 2, Inositol-triphosphate 5/6-kinase 2, Ins(1,3,4)P(3) 5/6-kinase 2, Inositol-hexakisphosphate 5-kinase.
What is the protein family that this protein belongs to?
Belongs to the ITPK1 family.
Protein: GRPE_ALKOO
Sequence: MKETKQEEMEVREDCESVDSNLEATVEEMESTKGTSEDLEQKLAEKTAQYEDIFSQFQRLQADFTNYKKRVEKEKGDIYLYANEKIALDLLNIIDNFERAIQSTEKTEENDSLLQGISLVYKQLLDTLTKHGVEEIEAMEKPFDMNLHYAVMQEESEGASNYVIDVLQKGYKIKDRILRPAMVKVSK
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE.  It is the nucleotide exchange factor for DnaK and may function as a thermosensor.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.
What are the official names of this protein?
Protein GrpE, HSP-70 cofactor.
What is the protein family that this protein belongs to?
Belongs to the GrpE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL5_BORBZ
Sequence: MNYVPELKKYYKDSVIKELVKEFEYKSIMQVPKLEKIVISVGVGEAVRNKKLLDSAVLELAQITGQKAVKTKAKKAIAGFKIRQGQEIGAKVTLRGNAMYEFLYKLIHLALPRVKDFRGINGDAFDGNGNYSFGITEQIIFSEIDYDKIERISGLNITIVTTASNDKESKALLLKFGMPFSN
What is the function of this protein?
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.  In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement.  Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
What are the official names of this protein?
50S ribosomal protein L5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
Protein: TRMHL_STAS1
Sequence: MEEIVIVGRHAVKEAIVSGHTINKILIQDTIKKGQINEILKLANSNKIIVQSVPKSKIDGLSDSPHQGVAAYIAPYEYADFDAFVAQQKAQDKLSTVLILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHIPVMRVTNLANTIETLKDNGYWIVGTEAENSTDYREMDAGMPLGIVIGSEGQGMSRLVKEKCDFYINIPMVGHVNSLNASVAASLMMYEVFRKRNYIGDKA
What are the official names of this protein?
Putative TrmH family tRNA/rRNA methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
Protein: DCDA_CORGL
Sequence: MATVENFNELPAHVWPRNAVRQEDGVVTVAGVPLPDLAEEYGTPLFVVDEDDFRSRCRDMATAFGGPGNVHYASKAFLTKTIARWVDEEGLALDIASINELGIALAAGFPASRITAHGNNKGVEFLRALVQNGVGHVVLDSAQELELLDYVAAGEGKIQDVLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKAANNAENLNLVGLHCHVGSQVFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAYTAAEEPLNVAEVASDLLTAVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDVHVDDDKTRRYIAVDGGMSDNIRPALYGSEYDARVVSRFAEGDPVSTRIVGSHCESGDILINDEIYPSDITSGDFLALAATGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDILSLEA
What is the function of this protein?
Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.
What are the official names of this protein?
Diaminopimelate decarboxylase, DAP decarboxylase, DAPDC.
What is the protein family that this protein belongs to?
Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
Protein: SUMO1_HUMAN
Sequence: MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV
What is the function of this protein?
Ubiquitin-like protein that can be covalently attached to proteins as a monomer or a lysine-linked polymer.  Covalent attachment via an isopeptide bond to its substrates requires prior activation by the E1 complex SAE1-SAE2 and linkage to the E2 enzyme UBE2I, and can be promoted by E3 ligases such as PIAS1-4, RANBP2 or CBX4.  This post-translational modification on lysine residues of proteins plays a crucial role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction.  Involved for instance in targeting RANGAP1 to the nuclear pore complex protein RANBP2.  Covalently attached to the voltage-gated potassium channel KCNB1; this modulates the gating characteristics of KCNB1 (PubMed:19223394).  Polymeric SUMO1 chains are also susceptible to polyubiquitination which functions as a signal for proteasomal degradation of modified proteins.  May also regulate a network of genes involved in palate development.  Covalently attached to ZFHX3 (PubMed:24651376).
What are the official names of this protein?
Small ubiquitin-related modifier 1, SUMO-1, GAP-modifying protein 1, GMP1, SMT3 homolog 3, Sentrin, Ubiquitin-homology domain protein PIC1, Ubiquitin-like protein SMT3C, Smt3C, Ubiquitin-like protein UBL1.
What is the protein family that this protein belongs to?
Belongs to the ubiquitin family. SUMO subfamily.
What are the subcellular locations of this protein?
Nucleus membrane. Nucleus speckle. Cytoplasm. Nucleus, PML body. Cell membrane. Nucleus. Note=Recruited by BCL11A into the nuclear body (By similarity). In the presence of ZFHX3, sequesterd to nuclear body (NB)-like dots in the nucleus some of which overlap or closely associate with PML body (PubMed:24651376).
Protein: GLNK_ECO57
Sequence: MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
What is the function of this protein?
Involved in the regulation of nitrogen metabolism.  Regulates the activity of its targets by protein-protein interaction in response to the nitrogen status of the cell.  Involved in the regulation of the ammonium transporter AmtB so as to optimize ammonium uptake under all growth conditions.  In nitrogen-limited conditions, GlnK does not interact with AmtB, which remains active and imports ammonium.  When extracellular ammonium increases, GlnK associates tightly with AmtB in the inner membrane, thereby inhibiting the transporter activity.
What are the official names of this protein?
Nitrogen regulatory protein GlnK, Nitrogen regulatory protein P-II 2.
What is the protein family that this protein belongs to?
Belongs to the P(II) protein family.
What are the subcellular locations of this protein?
Cytoplasm. Cell inner membrane. Note=During nitrogen limitation, GlnK is predominantly in its fully uridylylated state in the cytoplasmic fraction. In response to nitrogen shock, GlnK is deuridylylated rapidly and associates tightly with AmtB in the inner membrane.
Protein: Y4503_PSEPW
Sequence: MERILENAMYASRWLLAPIYFGLSLGLLALALKFFQEVIHVLPNVFALSEADLILVILSLIDMSLVGGLLVMVMISGYENFVSQLDIDDSKEKLNWLGKMDSSSLKMKVAASIVAISSIHLLRVFMDAQNISTDYLMWYVIIHMTFVVSAFCMGYLDKVTKH
What are the official names of this protein?
UPF0114 protein PputW619_4503.
What is the protein family that this protein belongs to?
Belongs to the UPF0114 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RUVB_BACC4
Sequence: MDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYGPPGLGKTTLANIIANEMGVNVRTTSGPAIERPGDLAAVLTALQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLSRLEYYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGNGTVTMEITQMALELLQVDKLGLDHIDHKLLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYEPYLLQIGFLQRTPRGRIVTPLAYEHFGMEIPKV
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time.  Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange.  Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration.  The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration.  Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvB.
What is the protein family that this protein belongs to?
Belongs to the RuvB family.
Protein: MAX_DANRE
Sequence: MSDNDDIEVDSDADSPRFHGVADKRAHHNALERKRRDHIKDSFHSLRDSVPALQGEKQSIKQASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALEKVKGTTQLQANYSSSDSSLYTNPKGQAVSAFDGGSDSSSGSEPEEQRTRKKHRPEDS
What is the function of this protein?
Transcription regulator.  Forms a sequence-specific DNA-binding protein complex with MYC or MAD which recognizes the core sequence 5'-CAC[GA]TG-3'.  The MYC-MAX complex is a transcriptional activator, whereas the MAD-MAX complex is a repressor (By similarity).
What are the official names of this protein?
Protein max, Myc-associated factor X.
What is the protein family that this protein belongs to?
Belongs to the MAX family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PGK_STRPN
Sequence: MAKLTVKDVDLKGKKVLVRVDFNVPLKDGVITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKAGKSLAPVAADLAAKLGQDVVFPGVTRGAELEAAINALEDGQVLLVENTRYEDVDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLEKADNVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGKLILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTEK
What are the official names of this protein?
Phosphoglycerate kinase.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CATB_EMENI
Sequence: MRALGLVGLVGVANAVCPYMTGELGRRDTNPDATEATEEFLSEYYLDDTDSYLTTDVGGPIEDQQSLKAGARGSTLLEDFIFRQKIQRFDHERVPERAVHARGAGAHGVFTSYGDFSNITAASFLSAEGKETPVFVRFSTVAGSRGSSDLARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIQFPDLIHAVKPKGDREIPQAATAHDAAWDFFSQQPSTLHTLLWAMAGHGIPRSFRHVDGFGVHTFRLVTEDGSTKLVKFHWKTLQGLASMVWEEAQQISGKNPDYMRQDLFESIEAGRYPEWELNVQIMDEEDQLRFGFDLFDPTKIVPEEYVPLTPLGKMTLNRNPRNYFAETEQVMFQPGHVVRGVDFTEDPLLQQGRLFSYLDTQLNRNGGPNFEQLPINQPRVAIHNNNRDGAGQMFIPLNPDAYSPNTLKGSTLKQANQTAGRGFFTAPDRTANGNLVRAKSSTFDDAWSQPRLFWNSLLPAEKQFVVNAIRFENANVKSDVVKNNVIVQLNRISNDLATRVAKAIGVDAPEPDNTYYHDNTTSNIGAFGHRLQSLAGLKIAVLASVDAEESFSAATALKAELSNDNLDVIVVAERFSNGVNQTYSASDAIQFDAVVVAPGAEKLFGAKSAANSSSTLYPAGRPLEILVDAFRFGKPVAALGSGSTAFDNAGINTAVEGVYVADAVDESFANNLEEGLTVFKFLDRFALDSDE
What is the function of this protein?
Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
What are the official names of this protein?
Catalase B.
What is the protein family that this protein belongs to?
Belongs to the catalase family.
What are the subcellular locations of this protein?
Secreted.
Protein: RHO_THEMA
Sequence: MSEEQKTISISELESMNIKQLYEIAKSLGIPRYTSMRKRDLIFAILKAQTESTGYFFGEGVLEIHPEGFGFLRRIEDNLLPSNDDIYISPSQIRKFNLNTGDIISGVIRKPKEGEKYFAMIKIEAINYRPVEAVNDRVNFDNLTPDYPRERFILETDPKIYSTRLIDLFAPIGKGQRGMIVAPPKAGKTTILKEIANGIAENHPDTIRIILLIDERPEEVTDIRESTNAIVIAAPFDMPPDKQVKVAELTLEMAKRLVEFNYDVVILLDSLTRLARVYNIVVPPSGKLLTGGVDPAALYKPKRFFGAARNTREGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELVLSRQLANKRIFPAINLLLSGTRREELLLDEETLKKVWLLRRMLSAMTEEEGLTLILNKLSETSSNEEFLKLIDKEKARY
What is the function of this protein?
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.
What are the official names of this protein?
Transcription termination factor Rho, ATP-dependent helicase Rho.
What is the protein family that this protein belongs to?
Belongs to the Rho family.
Protein: Y183_METJA
Sequence: MLSPDMPLKNLDEYDRLGIKKKADAIARFIENRWDYLQKNNMIALYGN
What are the official names of this protein?
Uncharacterized protein MJ0183.
Protein: RS3_GLUDA
Sequence: MGHKVNPIGLRLGINRTWDSRWYAGADYSRLLHDDLKLRAHLRRKLSGAGVSRVVIERPAKKPRVTIYAARPGVVIGKKGQDIDVLRKDLTRMAKTDVALNIVEIRKPEIDATLVAENIAQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRADIDYGVATAKTTYGTCGVKVWIFKGEILAHDPLAQDRRAAEQAPQR
What is the function of this protein?
Binds the lower part of the 30S subunit head.  Binds mRNA in the 70S ribosome, positioning it for translation.
What are the official names of this protein?
30S ribosomal protein S3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS3 family.
Protein: URED_RHOPB
Sequence: MTPLDTSAAAIFAANRAQGAVKFDVRLQDGMTRRGRVQESGSLRVRFPSPEAEGLSAVFINTAGGIAGGDRFDTDIAAGEGTRLTLTTAAAEKLYRAAGAPAQIRIALAAAANAHLAWLPQETILFDQARVARSIDIDLAETASLLLCEIVVFGRAAMGERMLSGEFVDRWRLRRGGRLVFAETVRLDGDIGATLAHRAVANGAAAIGTALIVPGDEALVQRIRDSAPSFSGEVGISAWNGFAMARFCAQDAARLRTDMMAVLGCASGTALPRLWLS
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreD.
What is the protein family that this protein belongs to?
Belongs to the UreD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMA_COXBR
Sequence: MKKMPMRKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLRVVGNLPYNISTPLLFHLFSQIHCIEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAKYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWPLLEINPQLRPQELTVEDFVKISNILN
What is the function of this protein?
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle.  May play a critical role in biogenesis of 30S subunits.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase A, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase, 16S rRNA dimethyladenosine transferase, 16S rRNA dimethylase, S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CALD_BRAOB
Sequence: MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELWERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKVCK
What is the function of this protein?
Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1, FRUITFULL and LEAFY.  Is required subsequently for the transition of an inflorescence meristem into a floral meristem.  Seems to be partially redundant to the function of APETALA1 (By similarity).
What are the official names of this protein?
Truncated transcription factor CAULIFLOWER D, BobCAL-d, Agamous-like MADS-box protein CAL-D.
What are the subcellular locations of this protein?
Nucleus.
Protein: PAP1_VACCC
Sequence: MNRNPDQNTFPNITLKIIETYLGRVPSVNEYHMLKLQARNIQKITVFNKDIFVSLVKKNKKRFFSDVDTSASEIKDRILSYFSKQTQTYNIGKLFTIIELQSVLVTTYTDILGVLTIKAPNVISSKISYNVTSMEELARDMLNSMNVAIIDKAKVMGRHNVSSLVKNVNKLMEEYLRRHNKSCICYGSYSLYLINPNIRYGDIDILQTNSRTFLIDLAFLIKFITGNNIILSKIPYLRNYMVIKDENDNHIIDSFNIRQDTMNVVPKIFIDNIYIVDPTFQLLNMIKMFSQIDRLEDLSKDPEKFNARMATMLEYVRYTHGIVFDGKRNNMPMKCIIDENNRIVTVTTKDYFSFKKCLVYLDENVLSSDILDLNADTSCDFESVTNSVYLIHDNIMYTYFSNTILLSDKGKVHEISARGLCAHILLYQMLTSGEYKQCLSDLLNSMMNRDKIPIYSHTERDKKPGRHGFINIEKDIIVF
What is the function of this protein?
Polymerase that creates the 3'-poly(A) tail of mRNA's.
What are the official names of this protein?
Poly(A) polymerase catalytic subunit, Poly(A) polymerase large subunit, PAP-L, VP55.
What is the protein family that this protein belongs to?
Belongs to the poxviridae poly(A) polymerase catalytic subunit family.
Protein: DPRP_MYCTU
Sequence: MAERAPRGEVAVMVAVQSALVDRPGMLATARGLSHFGEHCIGWLILALLGAIALPRRRREWLVAGAGAFVAHAIAVLIKRLVRRQRPDHPAIAVNVDTPSQLSFPSAHATSTTAAALLMGRATGLPLPVVLVPPMALSRILLGVHYPSDVAVGVALGATVGAIVDSVGGGRQRARKR
What is the function of this protein?
Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis.  Could be involved in the dephosphorylation of decaprenylphosphoryl-5-phosphoribose (DPPR) to decaprenyl-phospho-ribose (DPR) (By similarity).
What are the official names of this protein?
Putative decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c, DPPR phosphatase, Phospholipid phosphatase.
What is the protein family that this protein belongs to?
Belongs to the PA-phosphatase related phosphoesterase family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.