PharMolix/UniProtQA huggingface dataset:
Protein: DABA_HALWD
Sequence: MTTESTSESKTKTETETETETEQRNDLSNSSNSSEDASCPGSSPVSTESDPDNDDTSVSANTIVRQYIESAAESVGALWPIHSFVTANPLSGFEDQPFHKAVAAGATRFGGDGYPDSDVFEHAWKTGQINQEILKKTLDEYETDHTPASAIAAIDSGTQATSGRDTGVRMGTGVDDEINNWDEIDKRVIKWLSAFLDAGSAEWEMPNRGSGFYTAFQSVATYDTMIPDTDLIEDPPADPIDAVSTVLASYPRSQWSEIIEAQITALPGWTGLICYRTENETAWQTAYPITLVGYLAARMMLADALSIPLDSISRPAHSVTSTEESTADIETYPLQEIILIAWERTYREELIEQIADTADNHKHEHDHDHDADKTIGDDVEPQADSRSSSVRPDAQLVFCIDTRSEIIRRHIESTGQYETYGYAGFFGIPMRYRGYDDAVSIDACPPIVDAQHRISESAKHADENKTPNGQYNSRYERIRDIYDAGIDIVDSLASNVTTAFNFVETTGSGYGVGLALRTLFPQRVYDILTRIENRLPRIDVISQPQLNTATGEVNQYSHNETDGSHSEDVLPYGLTHQERVEYAASAFELMGLKTFGRVVGFIGHASQTANNPFGSSLDCGACAGNAGGPSARVLAQICNDDAVKTSLRDRGIDIPVDTVFIAGEHTTTTDKITLYTEAIPDSHQDDIRSLQADLSIAQEDAAAERLESLSGDTTVDAIQDIERRAADWAETRPEWGLAGNAGFVIGPRRLTDDVDLEGRVFLHSYDWQQDETGSALESILTGPLIVTQWINAQYYFATVDTAVYGSGSKVTQNPVGNVGIYQGNGGDLMRGLPVQSVRKSTDNLYHQPIRLSTVVHAPVSKVTHALADLESVTELLDNNWISLTVIDPTRENDAFHYVKGLKWLPHGEGYKHDATECISPQINQTVSSSSD
What is the function of this protein?
Part of an energy-coupled inorganic carbon pump.
What are the official names of this protein?
Probable inorganic carbon transporter subunit DabA.
What is the protein family that this protein belongs to?
Belongs to the inorganic carbon transporter (TC 9.A.2) DabA family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: LGT_RICCK
Sequence: MIFPNINPVIFSIGPFAISWYSLSYVIGILLGWFYANKIIEKFKPQITKKNLEDFITYAVIGIIVGGRLGFVLLYNPSRYFSNPIDILKTYQGGMSFHGGALGVIIAAYLFCRKYKVNFLSLTDIIATVVPIGLFLGRIANFINGELYGRITNSSFGIIFPNSDLSPRHPSQLYEAFFEGLVLFCILAYATFKHKTLEKRALNLGLFLTFYALFRITIEIFREPDMQIGFILDSLTMGQILSIPMLILGSSLICQSTLK
What is the function of this protein?
Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
What are the official names of this protein?
Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase.
What is the protein family that this protein belongs to?
Belongs to the Lgt family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: MURG_CLOBJ
Sequence: MKKIIMTGGGTAGHVTPNLALVPELKKLGYEIKYIGSIEGIERKIIEKEGIEYFPISSGKLRRYFDLKNFSDPFKVLKGVFQAKKIIKREKPDIVFSKGGFVTVPVVIAAHLNKIPVIAHESDITPGLANKLATPYCTRVCVTFPESVKHIKGDKAVLTGTPIRRELLEGNKLEGIKLCGFKDNKPILLIIGGSLGSKIINEIVRKNLDNILSKFNIIHICGKSNLDENLENRKGYAQFEYVNEELPDLMKASDLVISRAGANVIYELLALKKPNLLIPLSKKSSRGDQILNAASFEKSGYSLVLKEEELEDKNLMKKLNYLYENRNVYINNMSKSKMDNGVKNITELIKKYTK
What is the function of this protein?
Cell wall formation.  Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).
What are the official names of this protein?
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 28 family. MurG subfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: OHRL_STAA3
Sequence: MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDSDSESPKLSVSIDATIKNVISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD
What are the official names of this protein?
Organic hydroperoxide resistance protein-like.
What is the protein family that this protein belongs to?
Belongs to the OsmC/Ohr family.
Protein: FB147_ARATH
Sequence: MAISDLPRDLVEEVLSRVPVTSLRTVRSTCKKWNIISKDESFTKKHVGQANAAARESEFQVVIMTEYKVYLMSVNLHGIQNNVDPSIEFKCKLISLDDSDRIVDFHPVYETEIYNFHSDSWKNIVDSTPEGDMQYFKQGVSLKGNTYWFARKYVIYEGGQEAWVSFLICFDFTTERFGPRLTLPFDYSTKESVSLLSAREEQLVLLYHPWFTMMMEIWVSNKIELNAVSWIKFLEVNMITFPHYRFSFHHVSFFIDKKNKVVVVLDKDKETRSRNLGYFIGDDGYFKEVELGGSRDRNGYPFVFSYVPSSVQF
What are the official names of this protein?
Putative F-box protein At3g16820.
Protein: RBL_PERSE
Sequence: TKASVGFKAGVKEYKLTYYTPDYEPHDHDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYNIEPVAGEENQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQSETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFVEKDRSRGIYFTQPWVSLPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAAANRVALEACVQARNEGRDLAREGNEIIRKASKWSPELAAACEVWKEIKFEFQAMDTL
What is the function of this protein?
RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process.  Both reactions occur simultaneously and in competition at the same active site.
What are the official names of this protein?
Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit.
What is the protein family that this protein belongs to?
Belongs to the RuBisCO large chain family. Type I subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RL29_STRPM
Sequence: MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARVKTVQSEMK
What are the official names of this protein?
50S ribosomal protein L29.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL29 family.
Protein: BDTIR_BRADI
Sequence: MASSGLSSRRSIMASRLTASAEAVNEPRRGAVVSRRVEYDEESLAGAGGESRYEVFINHRGVDTKRTVARLLYDRLAQAGLRGFLDNMSMRPGDRLEERIGSAIRECTVAVAIFSPSYCDSEYCLRELAMLVESRKAIIPIFYDIKPSDLLLPQAVADSEVYLPRDLERFKFALREAKHTVGITYDSATGDMAELVSAAADAVMYNMEKMETVQRRETMILSRL
What is the function of this protein?
An NAD(+) hydrolase (NADase).  Upon activation catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR) and nicotinamide; NAD(+) cleavage triggers a defense system that promotes cell death (PubMed:31439793).  In addition to ADPR, also generates a cyclization variant of cyclic ADPR termed v-cADPR (2'cADPR) (PubMed:31439793).  Also hydrolyzes NADP(+), but not other NAD(+)-related molecules (PubMed:31439793).  v-cADPR activates ThsA, an NAD(+) hydrolase in B. cereus (AC J8G6Z1) (PubMed:34853457).  Probably makes 2'cADPR; the cADPR made by this protein is bound by cmTad1 (AC P0DW61) and activates ThsA from B. cereus (PubMed:36174646).  Boiling cmTad1 bound to the cyclic nucleotide releases 2'cADPR, strongly suggesting it is the product of this protein (PubMed:36174646) (Probable).
What are the official names of this protein?
Probable 2' cyclic ADP-D-ribose synthase BdTIR, Probable 2'cADPR synthase AbTIR, NAD(+) hydrolase TIR, NADP(+) hydrolase TIR, TIR-only protein, BdTIR.
Protein: MCP_CEV01
Sequence: MGGGLMQLVAYGAQDVYLTGNPQITFWKVTYRRYTNFAMESIEQTFNGQADFGRRVTCTISRNGDLAYRTYLQVTLPEINQQMLPAGVGQNLASNVLGSTTPGANNKGLEYGVFARWLDFPGEQMISMVEVEIGGQRIDRQYGDWMHIWNQLTLTAEQQRGYYKMVGNTTQLTFITDPSFAAVDGPCATTAPTQVCAPRNALPETTLYVPFQFWYCRNPGLALPLIALQYHEIKINLDLRPIDECLWAVSSLHNVCDSAATPTKVATAYQQSLVAASLYVDYVFLDTDERRRMAQNPHEYLIEQLQFTGDESVGSSSNKIKLNFNHPCKELIWVVQPDQNVDYCASLICGTTLFQVLGAQPFNYTDAIDVLPNGVHAFRWTRICXKDLMHSSPQLVFLIRLAQLMQSLSLVGEYDEPNFEHVSLGSASAGGGFFPPASAASSRANGGAVDFQSAVSDAGTFVLTETSLDMHCWGENPVVTAKLQLNGQDRFSEREGTYFDLVQPYQHHTRSPDTGINLYSFALRPEEHQPSGTCNFSRIDNATLQLVLSNATVGGTNTAKVRVYATNYNVLRIMSGMGGLAYSN
What is the function of this protein?
Major protein of the capsid.
What are the official names of this protein?
Major capsid protein, MCP.
What is the protein family that this protein belongs to?
Belongs to the NCLDV major capsid protein family.
What are the subcellular locations of this protein?
Virion.
Protein: RIMO_ECOLI
Sequence: MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV
What is the function of this protein?
Catalyzes the methylthiolation of the residue Asp-89 of ribosomal protein S12.
What are the official names of this protein?
Ribosomal protein S12 methylthiotransferase RimO, S12 MTTase, S12 methylthiotransferase, Ribosomal protein S12 (aspartate(89)-C(3))-methylthiotransferase, Ribosome maturation factor RimO.
What is the protein family that this protein belongs to?
Belongs to the methylthiotransferase family. RimO subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CID3_ARATH
Sequence: MKPVLHSGSSSNGFSHRRFEKEAWMNNAQPSVDNTENGWDAESVDTPSQKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEKDFGIILKMACLIRDSRGTKSRTVSKPSSKLLKIPADELVQVIAKDLPLSSDSVSDSVQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDPWKRGWNQFEVNKTLFGVTSTFDEELYTTKLERGPGTRELEEQALRIAREIVGENTRDIHVAEERGLQLSGKFDIDEETKYSSVCATNRFDDTCYEDDEEEEEDILLDCCNNLTFGDSSASDGKEPASTGKFYEDSWGDSLHLRSNKMVDQSWSNSNKHTRQLMSELPSKDFPVAGNNIRNESQLGEQRKSKFLGASLFKKPSEESVSGFEDAPPPVKPSFIDGRLGLLSDRAKSENSSGWPGSSISRNSENSAASSASNLPILSPSSSGSLSSEKSTLNPNAKEFKLNPNAKSFKPSPSATRPQSPQSPVFDGSFYYPPVPPMPGLHIRYGTGAAFPGQQHPMMYNNTTQLSPNQTYYSPNSPQYPQPMMVTQQRPILFMPPTPYQPEMPYKGRDSY
What are the official names of this protein?
Polyadenylate-binding protein-interacting protein 3, PABP-interacting protein 3, Poly(A)-binding protein-interacting protein 3, PAM2-containing protein CID3, Protein CTC-INTERACTING DOMAIN 3.
Protein: RFFL_HUMAN
Sequence: MWATCCNWFCLDGQPEEVPPPQGARMQAYSNPGYSSFPSPTGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMCREKEELVLLVLGQQPVISQEDRTRASTLSPDFPEQQAFLTQPHSSMVPPTSPNLPSSSAQATSVPPAQVQENQQANGHVSQDQEEPVYLESVARVPAEDETQSIDSEDSFVPGRRASLSDLTDLEDIEGLTVRQLKEILARNFVNYKGCCEKWELMERVTRLYKDQKGLQHLVSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFRS
What is the function of this protein?
E3 ubiquitin-protein ligase that regulates several biological processes through the ubiquitin-mediated proteasomal degradation of various target proteins.  Mediates 'Lys-48'-linked polyubiquitination of PRR5L and its subsequent proteasomal degradation thereby indirectly regulating cell migration through the mTORC2 complex.  Ubiquitinates the caspases CASP8 and CASP10, promoting their proteasomal degradation, to negatively regulate cell death downstream of death domain receptors in the extrinsic pathway of apoptosis.  Negatively regulates the tumor necrosis factor-mediated signaling pathway through targeting of RIPK1 to ubiquitin-mediated proteasomal degradation.  Negatively regulates p53/TP53 through its direct ubiquitination and targeting to proteasomal degradation.  Indirectly, may also negatively regulate p53/TP53 through ubiquitination and degradation of SFN.  May also play a role in endocytic recycling.
What are the official names of this protein?
E3 ubiquitin-protein ligase rififylin, Caspase regulator CARP2, Caspases-8 and -10-associated RING finger protein 2, CARP-2, FYVE-RING finger protein Sakura, Fring, RING finger and FYVE-like domain-containing protein 1, RING finger protein 189, RING finger protein 34-like, RING-type E3 ubiquitin transferase rififylin.
Protein: AGOG_PYRHO
Sequence: MIAELIREIGIEGARFIEENIDEQFKALSYLSEGMDRVNFVRLVIANALVSYQLTGKGEMWWWEFAKYFKGKEVKTIYSAYKEFLPNSKFNRRLIQQKLLRIKKIEPFLSTLTEESIERYYEDMTLLWKAIAKVLKVDRESKTVVFSVKMFGYAARIVLSKFNPYPMEIPIPEDVRIIKLTRKLTNERPRDFWMKIAKESNVPPLHIDSILWPLLGGARVEEAPPELKEKLEKLIRVIR
What is the function of this protein?
DNA repair enzyme that is part of the base excision repair (BER) pathway; protects from oxidative damage by removing the major product of DNA oxidation, 8-oxoguanine (GO), from single- and double-stranded DNA substrates.
What are the official names of this protein?
N-glycosylase/DNA lyase, 8-oxoguanine DNA glycosylase, AGOG, DNA-(apurinic or apyrimidinic site) lyase, AP lyase.
What is the protein family that this protein belongs to?
Belongs to the archaeal N-glycosylase/DNA lyase (AGOG) family.
Protein: PGK_NITEU
Sequence: MSVIKLVDLDLKNKRVFIRADLNVPVKDGKVTSDARITASMATINHCLKQGAKVMVTSHLGRPEEGVWTEENSLQPVADDIARRLGKPVRLIKDWVEGGFEVASGELVVLENCRINKGEKKNLEETAKKYASLCDVFVMDAFGTAHRAEASTHGIAKYAPIACAGILLTEELDALTKALHQPAHPLVAIVGGSKVSTKLTVLESLAEKVDQLVVGGGIANTFLKAAGNNIGKSLCEDELVPVAKSLMDKMNKRNATIPIAVDVVVGKKFAEDEAAVLKAANAVSDDDMIFDIGPESAQELVDIIMKAGTVVWNGPVGVFEFDQFGEGTRAIAKAIAETDAFTLAGGGDTIAAIQKYDIYDKVSYISTAGGAFLEFLEGKKLPAVEILELRAK
What are the official names of this protein?
Phosphoglycerate kinase.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS9_STAA2
Sequence: MAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKAARRSPQFSKR
What are the official names of this protein?
30S ribosomal protein S9.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS9 family.
Protein: CYSC_ECO45
Sequence: MALHDENVVWHSHPVTPQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
What is the function of this protein?
Catalyzes the synthesis of activated sulfate.
What are the official names of this protein?
Adenylyl-sulfate kinase, APS kinase, ATP adenosine-5'-phosphosulfate 3'-phosphotransferase, Adenosine-5'-phosphosulfate kinase.
What is the protein family that this protein belongs to?
Belongs to the APS kinase family.
Protein: CYB_OTOGA
Sequence: MTNIRKHHPLAKMINHSFIDLPAPSNISSWWNFGSLLGLCLVIQITTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYLHANGASMFFICLFMHIGRGLYYGSFTFLETWNIGITLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYMGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHESGSNNPSGIPSDSDKIPFHPYYTIKDLLGAILLLLTLFSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILALIPFLHSAKQRSMMFRPLSQCLYWVLVADLLTLTWIGGQPVENPFITIGQVASVIYFSTILILMPLTNLLENKLLKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: LECM_TROCA
Sequence: MGRFLLVTLSLLVGAFSLNEANSCCCPQDWLPKNGFCYKVFNDHKNWNDAEMFCRKFKPGCHLASIHSNADSADLAEYASDYLKSDGNVWIGLNDPRKQRTWVWSDRSSTNYLAWNQGEPNNSKNIEYCVHLWALTGYLKWNDTPCKALYSFICQCRF
What is the function of this protein?
Mannose-binding lectin that binds to and agglutinates erythrocytes in a calcium-dependent manner.
What are the official names of this protein?
C-type lectin mannose-binding isoform, CTL, Venom C-type lectin mannose binding isoform 1.
What is the protein family that this protein belongs to?
Belongs to the true venom lectin family.
What are the subcellular locations of this protein?
Secreted.
Protein: RL27_FRASN
Sequence: MAHKKGASSSRNGRDSNAQRLGVKRFGGQLVKAGEIIVRQRGTHFHPGDLVGRGKDDTLFALAPGHVEFGRKRGRRVVNIVSADTERAEKAAVPA
What are the official names of this protein?
50S ribosomal protein L27.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL27 family.
Protein: SSRP_STRP8
Sequence: MAKGEGHILAQNKKARLDYHIVETVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNADPERTRKLLLKKREITHLANELKGTGMTLVPLKVYLKDGFAKVLIGLAKGKHDYDKRETIKRRDQERDIKKQMKHYNAR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: NAC37_ARATH
Sequence: MEPMESCSVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGKKSDWIMHEYRLESDENAPPQEEGWVVCRAFKKRATGQAKNTETWSSSYFYDEVAPNGVNSVMDPIDYISKQQHNIFGKGLMCKQELEGMVDGINYIQSNQFIQLPQLQSPSLPLMKRPSSSMSITSMDNNYNYKLPLADEESFESFIRGEDRRKKKKQVMMTGNWRELDKFVASQLMSQEDNGTSSFAGHHIVNEDKNNNDVEMDSSMFLSEREEENRFVSEFLSTNSDYDIGICVFDN
What is the function of this protein?
Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity).  Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE).  Triggers thickening of secondary walls (PubMed:25148240).
What are the official names of this protein?
NAC domain-containing protein 37, ANAC037, Protein VASCULAR RELATED NAC-DOMAIN 1.
What is the protein family that this protein belongs to?
Belongs to the plant vascular related NAC-domain protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RNH_HAEDU
Sequence: MKSVNIFTDGSCLGNPGPGGIGVVLRYNQHQKKVSQGYFQTTNNRMELRAVIEGLSMLKEACNVTLYSDSQYMKNGITKWIFKWKKSNWKTANGKAVKNKDLWLLLDEKIQIHYIEWKWVKGHSGHYENEICDELAKLGANNPTLEDVGYQPA
What is the function of this protein?
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
What are the official names of this protein?
Ribonuclease HI, RNase HI.
What is the protein family that this protein belongs to?
Belongs to the RNase H family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL35A_AERPE
Sequence: MARARGVVLGYRRGTNTQYPQHALVKLLLDDPRKAGLYVSGIAFYRDRYGNVYKGRVLRLHGRRGGVVVVKFNPPLPGQATGGVVEVVKAGGDG
What are the official names of this protein?
50S ribosomal protein L35Ae.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL33 family.
Protein: LEPA_NEIG2
Sequence: MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSMDIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQCSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIKLKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTLVANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQALGFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPDIGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEVVMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHKGRELASKMRELIPRQMFDIAVQAAIGSRIIARENVKALRKNVLAKCYGGDITRKKKLLEKQKAGKRRMKQVGNVEIPQSAFLAILQVSDK
What is the function of this protein?
Required for accurate and efficient protein synthesis under certain stress conditions.  May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.  Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly.  Binds to ribosomes in a GTP-dependent manner.
What are the official names of this protein?
Elongation factor 4, EF-4, Ribosomal back-translocase LepA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: KHSE_ECO81
Sequence: MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETFSLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACSVVAALMAMNEHCGKLLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDIISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTAQRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
What are the official names of this protein?
Homoserine kinase, HK, HSK.
What is the protein family that this protein belongs to?
Belongs to the GHMP kinase family. Homoserine kinase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GPMA_HAMD5
Sequence: MTIKKLILVRHGESEWNKENRFTGWADVDLSEKGRVEAQQAGNLLKKKGFSFDFAYTSVLRRATNTLSLILDVLQQQNLPIEKSWRLNERHYGALQGLNKSETAAKFGSEQVKQWRRGFSTLPPALNLNDPRAPANDSLYATLNKNDLPLTESLATTVDRVVPYWDEVVKPRIIDGKRVIIVAHGNSIRALVKYVDHLSEEEIMEINIPTAVPLVYEFNSSLQPINHYYLGNAEEITQKVAAVAAQGKA
What is the function of this protein?
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
What are the official names of this protein?
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, BPG-dependent PGAM, PGAM, Phosphoglyceromutase, dPGM.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.
Protein: AROD_SALSV
Sequence: MKTVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIALNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTILHQA
What is the function of this protein?
Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids.  Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.
What are the official names of this protein?
3-dehydroquinate dehydratase, 3-dehydroquinase, Type I DHQase, Type I dehydroquinase, DHQ1.
What is the protein family that this protein belongs to?
Belongs to the type-I 3-dehydroquinase family.
Protein: CG121_COCIM
Sequence: MSLIETHHLSYLPESHPVHVALYRDLQNASFLREQLLAGNTEFEYAFIDASMIFSRNHIFAAIFRAVRDYINNRLKSKNVHSEIVFSLGGSNNIADAFRRFGISESTRDLLVVKVSTAPEITHESVSKHLEHNIKALPCPFTEESLASMTDRARLRKVYKFGSVGADTFKRLDEVEQGKNGSETTKEAARKHIDMLLMGAIAIRGAT
What is the function of this protein?
Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.  The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37.  CGI121 acts as an allosteric effector that regulates the t(6)A activity of the complex.  The EKC/KEOPS complex also promotes both telomere uncapping and telomere elongation.  The complex is required for efficient recruitment of transcriptional coactivators.  CGI121 is not required for tRNA modification (By similarity).
What are the official names of this protein?
EKC/KEOPS complex subunit CGI121.
What is the protein family that this protein belongs to?
Belongs to the CGI121/TPRKB family.
What are the subcellular locations of this protein?
Nucleus. Chromosome, telomere.