PharMolix/UniProtQA huggingface dataset:
Protein: DNLJ_AGRVS
Sequence: MADALIPVEDLSEEQAGQELIRLAAAIAHHDALYHGKDQPEISDADYDALKRRNDAIEARFPTLVRSDSPSQRVGAAPAGIFSQITHARPMLSLDNTFSDEDVADFVASVYRFLGVMPDNSIAFTAEPKIDGLSMSIRYEHRKLKTAATRGDGTTGENVTANILTIKEIPTELPADAPDVVEVRGEVYMAKSDFLALNAQMEAEGRQTYVNPRNTAAGSLRQLDAKVTASRKLKFFAYAWGEMSTMPAETQSGMVEAFKRWGFPVNPLTRRLTSVEEIIAHYREIGLQRADLDYDIDGVVYKVDRLDLQARLGFRSRSPRWATAHKFPAEQAFTTVEAIDIQVGRTGALTPVARLEPITVGGVVVTNATLHNADYIEGIGNGGERIRPEGHDIRIGDTVIVQRAGDVIPQVLDVVLEKRPETSVKYEFPKTCPVCGSHAVREKNEKTGKLDSVTRCTGGFVCSAQAKEHIKHFVSRNAFDIEGLGTKQVDFFFESEDPALMIRTAPDIFTLKQRQEASSLTRLENIDGFGRVSVRKLFDAIDARREIALNRFIFALGIRHVGETTAKLLARSYGSYAAFADAMQEAAPKFGEAWNELNSIDGIGEVVAASMVEFFKEPRNLEVVSRLLKEVTPLDAEAVTASDSPVAGKTVVFTGSLERFTRDEAKARAESLGAKVAGSVSKKTDYLVAGPGAGSKLDKAREVGVTVMTEDEWLALIGW
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
Protein: PDIA3_BOVIN
Sequence: MRLRRLALFPGLALLLAAARLAAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRTADGIVSHLKKQAGPASVPLKSEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNYRFAHTNVESLVNKYDDDGEGITLFRPSHLTNKFEDKTVAYTEQKMTSGKIKRFIQENIFGICPHMTEDNKDLLQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGQKLHFAVASRKTFSHELSDFGLESTTGEIPVVAVRTAKGEKFVMQEEFSRDGKALERFLEDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKQNPKKYEGGRELSDFISYLKREATNPPVIQEEKPKKKKKAQEDL
What is the function of this protein?
Disulfide isomerase which catalyzes the formation, isomerization, and reduction or oxidation of disulfide bonds (By similarity).  Associates with calcitriol, the active form of vitamin D3 which mediates the action of this vitamin on cells (By similarity).  Association with calcitriol does not affect its enzymatic activity (By similarity).
What are the official names of this protein?
Protein disulfide-isomerase A3, 58 kDa glucose-regulated protein, 58 kDa microsomal protein, p58, Disulfide isomerase ER-60, Endoplasmic reticulum resident protein 57, ER protein 57, ERp57, Endoplasmic reticulum resident protein 60, ER protein 60, ERp60.
What is the protein family that this protein belongs to?
Belongs to the protein disulfide isomerase family.
What are the subcellular locations of this protein?
Endoplasmic reticulum. Endoplasmic reticulum lumen. Melanosome.
Protein: MDTI_YERPE
Sequence: MQQLEFYPIAFLILAVMLEIVANILLKMSDGFRRKWLGILSLLSVLGAFSALAQAVKGIELSVAYALWGGFGIAATVAAGWILFNQRLNYKGWIGLILLLAGMVMIKLS
What is the function of this protein?
Catalyzes the excretion of spermidine.
What are the official names of this protein?
Spermidine export protein MdtI.
What is the protein family that this protein belongs to?
Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family. MdtI subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: CYB_TEROR
Sequence: MSTNLRKTHPLAKIINNSFIDLPSPSNISAWWNFGSLLGTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGNTLVQWIWGGFSVDNATLTRFFTFHFLLPFTIMGLSMMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLTLFSPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLLVLTWIGGQPVENPFIIIGQMASILYFSILLILMPIAGVIENKMLS
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: CSPLD_SORBI
Sequence: MAEEVWKALSLLFRIAALGLSLAAAIVMATASQLVIGGGGGHESSSYSVSFGQYNALRYFVAAGAISAVCSAAALYLFAVRADFTVVVVSLPLVPVLDAAAQGFLFSAAGAAFATRDVVGGGTSAGRGSSVCDAAGAFCGRVTVAAAVCAFAAVSVATAALASRDAGGGSSEGRRFEW
What are the official names of this protein?
CASP-like protein 1U1, SbCASPL1U1.
What is the protein family that this protein belongs to?
Belongs to the Casparian strip membrane proteins (CASP) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: WHS11_CANAW
Sequence: MSDLGRKDIGDKIESKLTPDSQKSTPEQFKDKVTDSLDSAAGKATSENDKSFVQKASDAIFGDSK
What are the official names of this protein?
White colony protein WHS11.
What is the protein family that this protein belongs to?
To yeast HSP12/GLP1 and S.pombe hsp9.
Protein: KTAP2_AEDAE
Sequence: MAVPTSVSLVLASVTAVLIFSAMQMYKPLIASSQMATVFGGFLGSWLFILSLTAVSNLEAVVLGKGFQAKLFPEVAFCLIGSLFACGMVHRVCATTCILFSVAALYYINRISQKVHNAPVPVDTYAGKKKKK
What is the function of this protein?
Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation.  N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER).  All subunits are required for a maximal enzyme activity.
What are the official names of this protein?
Protein KRTCAP2 homolog, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2, Oligosaccharyl transferase subunit KCP2.
What is the protein family that this protein belongs to?
Belongs to the KRTCAP2 family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: CCMA_SHIFL
Sequence: MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQTLLWIGHQPGIKTRLTALENLHFYHRDGDAAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA
What is the function of this protein?
Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein A.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RL31B_BURM1
Sequence: MKPGIHPDYREVVFQDMSNGFKFITRSTIQTRETIELEGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGSRASGKVAK
What are the official names of this protein?
50S ribosomal protein L31 type B.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL31 family. Type B subfamily.
Protein: VATD_STRGC
Sequence: MTRLNVKPTRMELNNLKARLKTAVRGHKLLKDKRDELMRRFIESVRENNQLRQKVESALVGHLQDFVMAKALESDLMVEEIFAVPMREVNLHVETENIMSVRVPKMHAHIDNPYGDDEGDVVYSYVASNSQMDETIESMSDLLPDLLRLAEIEKSCQLMADEIEKTRRRVNGLEYATIPDLKETIYYIEMKLEEAERASLVRMMKVK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
V-type ATP synthase subunit D, V-ATPase subunit D.
What is the protein family that this protein belongs to?
Belongs to the V-ATPase D subunit family.
Protein: RS27A_CHICK
Sequence: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
What is the function of this protein?
Component of the 40S subunit of the ribosome.  Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit.  During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome.
What are the official names of this protein?
Ubiquitin-40S ribosomal protein S27a, Ubiquitin carboxyl extension protein 80.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the eukaryotic ribosomal protein eS31 family.
What are the subcellular locations of this protein?
[Ubiquitin]: Cytoplasm. Nucleus.
Protein: SYDP_SHEPA
Sequence: MSSLPALDLFLSKYQQAYVDQLGEQPRYYAQEQESDCVVGEMDSDGAVFWQGVVRDNPGQFENVESALELTLCPEINTFYGRHFSAPLFFDSKWGSGELIQVWNQTDFEYLQQNIIGHLMMKKKLKQEPTWFIGVLDDEDKMLTVNNADGSVWVEIPGELQSTKLAESLDEFISLLTPRVMPPVKPIEESMPELDHPGIWQRMKLMWNNLRGK
What is the function of this protein?
Interacts with the SecY protein in vivo.  May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function.
What are the official names of this protein?
Protein Syd.
What is the protein family that this protein belongs to?
Belongs to the Syd family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Note=Loosely associated with the cytoplasmic side of the inner membrane, probably via SecY.
Protein: CA1C_CONAN
Sequence: GGCCSHPACFASNPDYC
What is the function of this protein?
Alpha-conotoxins act on postsynaptic membranes, they bind to the nicotinic acetylcholine receptors (nAChR) and thus inhibit them.
What are the official names of this protein?
Alpha-conotoxin-like AnIC.
What is the protein family that this protein belongs to?
Belongs to the conotoxin A superfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: MURE_VIBVY
Sequence: MRNTMNLTNLLAPWLDCPELADITVQSLELDSRQVKQGDTFVAIVGHVVDGRQYIEKAIEQGANAVIAQSCQQYPPGLVRYQQNVVIVYLEKLDEKLSQLAGRLYQHPEMSLIGVTGTNGKTTITQLIAQWLELAGQKAAVMGTTGNGFLNALQPAANTTGNAVEIQKTLADLQQQGAKATALEVSSHGLVQGRVKALQFAAGVFTNLSRDHLDYHGTMEAYAKAKMTLFTEHQCQHAIINLDDEVGAQWFQELQQGVGVSLFPQDASVKALWASSVAYAESGITIEFDGCFGQGRLHAPLIGEFNATNLLLALATLLALGVDKQALLDSAASLRPVLGRMELFQVNSKAKVVVDYAHTPDALEKALQALRVHCTGHLWAIFGCGGDRDKGKRPMMAEIAERLADHVVLTDDNPRSEDPAMIVQDMLAGLTRGDSAVVEHDRFSALQYALDNAQADDIILLAGKGHEDYQVLKHQTVHYSDRESAQQLLGISS
What is the function of this protein?
Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
What are the official names of this protein?
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase, Meso-A2pm-adding enzyme, Meso-diaminopimelate-adding enzyme, UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase, UDP-MurNAc-tripeptide synthetase, UDP-N-acetylmuramyl-tripeptide synthetase.
What is the protein family that this protein belongs to?
Belongs to the MurCDEF family. MurE subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYL_LISMC
Sequence: MTFNHKKMEPKWQQYWSEHNTFKTTEDKNKDNFYALDMFPYPSGAGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQYAIDTGNDPEEFTALNIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGLAYEAEIAVNWCPALGTVLANEEVIDGKSERGGFPVFRKPMRQWMLKITAYADRLLDDLDLVDWPENIKDMQRNWIGRSEGAEVTFKIKDSDETFNVFTTRPDTLFGATYTVFAPEHELIEKITTPEQKEAVEAYKKQVELKSELERTDLAKDKTGVFTGAYAINPINGEEVPIWIADYVLIQYGTGAIMAVPAHDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAITAAIDWLEKEGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLPKATEIKPSGTGESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNSEAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIFINEAYKQDTIPKQYVEGFVQLLSPIAPHLAEELWEILGHTETISYVAWPTYDETKLVEDEVEIVLQVNGKVKSKITVAKSLEKEELEKIAQEDNKMKENLEGKTIRKVIVVPGKLVNIVAN
What are the official names of this protein?
Leucine--tRNA ligase, Leucyl-tRNA synthetase, LeuRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EIF3G_SCHPO
Sequence: MSSSKSLDWADDEDYGTGLPSIQTFDNPDGTKTMIEFRIDDNGKKVKVTRVIRKTVITERVQHAVAERKKWKKFGKEAGKNSGVDARTTSVGENVQLRLQLGWTTTKEEEQDEAALAAAKVKAKGSSVVRCRACKGNHFTAQCPYKSIIGPVDEPPLDASPVSSRASGALGEKGRYIAPHLRAGSGRESGDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILRCEFSKPRD
What is the function of this protein?
RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.  The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.  This subunit can bind 18S rRNA.
What are the official names of this protein?
Eukaryotic translation initiation factor 3 subunit G, eIF3g, Eukaryotic translation initiation factor 3 RNA-binding subunit, eIF-3 RNA-binding subunit, Translation initiation factor eIF3 p33 subunit homolog, eIF3 p33 homolog.
What is the protein family that this protein belongs to?
Belongs to the eIF-3 subunit G family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MMRN1_HUMAN
Sequence: MKGARLFVLLSSLWSGGIGLNNSKHSWTIPEDGNSQKTMPSASVPPNKIQSLQILPTTRVMSAEIATTPEARTSEDSLLKSTLPPSETSAPAEGVRNQTLTSTEKAEGVVKLQNLTLPTNASIKFNPGAESVVLSNSTLKFLQSFARKSNEQATSLNTVGGTGGIGGVGGTGGVGNRAPRETYLSRGDSSSSQRTDYQKSNFETTRGKNWCAYVHTRLSPTVILDNQVTYVPGGKGPCGWTGGSCPQRSQKISNPVYRMQHKIVTSLDWRCCPGYSGPKCQLRAQEQQSLIHTNQAESHTAVGRGVAEQQQQQGCGDPEVMQKMTDQVNYQAMKLTLLQKKIDNISLTVNDVRNTYSSLEGKVSEDKSREFQSLLKGLKSKSINVLIRDIVREQFKIFQNDMQETVAQLFKTVSSLSEDLESTRQIIQKVNESVVSIAAQQKFVLVQENRPTLTDIVELRNHIVNVRQEMTLTCEKPIKELEVKQTHLEGALEQEHSRSILYYESLNKTLSKLKEVHEQLLSTEQVSDQKNAPAAESVSNNVTEYMSTLHENIKKQSLMMLQMFEDLHIQESKINNLTVSLEMEKESLRGECEDMLSKCRNDFKFQLKDTEENLHVLNQTLAEVLFPMDNKMDKMSEQLNDLTYDMEILQPLLEQGASLRQTMTYEQPKEAIVIRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEYALEMEDGLNKTMTIINNAIDFIQDNYALKETLSTIKDNSEIHHKCTSDMETILTFIPQFHRLNDSIQTLVNDNQRYNFVLQVAKTLAGIPRDEKLNQSNFQKMYQMFNETTSQVRKYQQNMSHLEEKLLLTTKISKNFETRLQDIESKVTQTLIPYYISVKKGSVVTNERDQALQLQVLNSRFKALEAKSIHLSINFFSLNKTLHEVLTMCHNASTSVSELNATIPKWIKHSLPDIQLLQKGLTEFVEPIIQIKTQAALSNLTCCIDRSLPGSLANVVKSQKQVKSLPKKINALKKPTVNLTTVLIGRTQRNTDNIIYPEEYSSCSRHPCQNGGTCINGRTSFTCACRHPFTGDNCTIKLVEENALAPDFSKGSYRYAPMVAFFASHTYGMTIPGPILFNNLDVNYGASYTPRTGKFRIPYLGVYVFKYTIESFSAHISGFLVVDGIDKLAFESENINSEIHCDRVLTGDALLELNYGQEVWLRLAKGTIPAKFPPVTTFSGYLLYRT
What is the function of this protein?
Carrier protein for platelet (but not plasma) factor V/Va.  Plays a role in the storage and stabilization of factor V in platelets.  Upon release following platelet activation, may limit platelet and plasma factor Va-dependent thrombin generation.  Ligand for integrin alpha-IIb/beta-3 and integrin alpha-V/beta-3 on activated platelets, and may function as an extracellular matrix or adhesive protein.
What are the official names of this protein?
Multimerin-1, EMILIN-4, Elastin microfibril interface located protein 4, Elastin microfibril interfacer 4, Endothelial cell multimerin.
What are the subcellular locations of this protein?
Secreted.
Protein: RPOA_LISW6
Sequence: MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDGALHEFSVIEGVVEDVTTMILNIKKLALKIYSDEEKTLEIDMQGPGVVTAADINYDSDVEILNPDLHIATLSDNAKFHVRLNATRGRGYTPADQNKRENMPIGVLPVDSIFSPVIRVNYQVENTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILSEHLSIFVNLTDEAQKAEIMIEKEESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELADKSEDDMMKVRNLGRKSLEEVKVKLADLGLSLRNEN
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit alpha, RNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase alpha chain family.
Protein: Y2146_ARATH
Sequence: MSDSAEMQQPELLLKSMNKLNGYHPQLIIPKKTLFKCDLDDKQSRLQVSSMHMENSGFLTEDEKRTIEAQKMKKRRTAGLRVAFIDPESQQYVLELHKWTKSYAFVKGWNKVVDKNDKTFKVGDVFSLWVFRCGGVNPVHDGVNLSGGHADSVVDGLEQGSLCFVLVPAKVSVHDGNLPQDSGHDGHNDNLPQDSVEPSSFFDESYELNHLFFDQEDSQGYLPDEDEDFGFNDDGSIRDSGHYQ
What are the official names of this protein?
Putative B3 domain-containing protein At2g31460.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL16_ACAM1
Sequence: MLSPRKTKFRKQHRGRMRGKATRGNTLSFGDYGLQALEPSWITSRQIEAGRRAMTRYVRRGGKIWIRIFPDKPVTMRPAETRMGSGKGAPEYWVAVVKPGRIMYEMNGVPESTAREAMRLAAFKMPIKTKFVARPKEES
What is the function of this protein?
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
What are the official names of this protein?
50S ribosomal protein L16.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL16 family.
Protein: RS13_SYNP6
Sequence: MARIAGVDLPRDKRAEIGLTYIYGIGPTRAKEILAKTGVSPDTRIKDLNDSEVAALRQVVENDYQVEGDLRRLEAMSIKRLMDIGTVRGRRHRAGLPVRGQRTRTNARTRRGARKTVAGKKKATR
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: STMP9_ARATH
Sequence: MAMKNTSHVLLLSLLLCLMFVIGLVEASIPDDDMGPAIYTPPSGSCGAPISKYDFQVLAKRPPPCRRPRLENTEDVTHTTRP
What is the function of this protein?
Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (By similarity).  Inhibits the fungal growth of Alternaria brassicicola, Sclerotinia sclerotiorum, Fusarium graminearum, yeast (Saccharomyces) and Botrytis cinerea, thus being an antimicrobial peptide (AMP) (PubMed:25593351).  Prevents global growth and development (PubMed:25593351).
What are the official names of this protein?
Secreted transmembrane peptide 9, Peptide ARACIN 2, Phytocytokine ARACIN2, Mature form of ARACIN2, mARACIN2, Phytocytokine STMP3, Precursor of secreted transmembrane peptide 9.
What is the protein family that this protein belongs to?
Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
Protein: BPT_BURO0
Sequence: MTHPTELPLSPLSALQFYATAPYPCSYLDGRIARSQVATPSHLINSDIYTELVKAGFRRSGVFTYRPYCDGCRACVPVRVPVGEFAPTRTQRRMWKRHRALVATVSPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFRDLDAPGGEPGKLRMVSMIDILGDGLSSVYTFFEPDDRHTSYGTYNILWQIEQAKSLGLPYVYLGYWIRESPKMAYKANFHPLEGLIDGRWKTLDPERIDLPPVDAALARAPLPGGHSGSG
What is the function of this protein?
Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate.
What are the official names of this protein?
Aspartate/glutamate leucyltransferase.
What is the protein family that this protein belongs to?
Belongs to the R-transferase family. Bpt subfamily.
Protein: ISCR_SALPK
Sequence: MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRASGRAQDAIDVKLRA
What is the function of this protein?
Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.
What are the official names of this protein?
HTH-type transcriptional regulator IscR.
Protein: RLMG_SERP5
Sequence: MSQLDLGTQQLELERYPQQEESTQLQAWEAADEYLLQQLENVNIGDRPVLIFNDNFGTLACALHSHQPYSISDSYMSQLATRHNLKLNELDPQQVTLLDTLAELPASPAVVLIRIPKALALLEQQLRALRDVVAPDTVIIAGAKARDVHTSTMQLFEKVLGPTRTSLAWKKARLIHCEVADIVPPAAPVTTNWVLDGTDWVIHNHANVFSRSNLDIGARLFLDHLPHDIEGHIIDLGCGNGVIGMAALMQNPQAQVSFVDESYMAVASSELNVEHNLPQDMDRCQFEVNNSLAGIERESVQAVLCNPPFHQQHAITDHTAWQMFCDAKRCLQVGGELRIVGNRHLDYHQKLKRLFGNCTLIASNKKFVILKAVKSGARY
What is the function of this protein?
Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase G, 23S rRNA m2G1835 methyltransferase, rRNA (guanine-N(2)-)-methyltransferase RlmG.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RlmG family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PIF5_ARATH
Sequence: MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQTHKQETLRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEFSSHFFSSIDHLGGPEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHCGSNQSTNIHQATTLPVSMSDRSKNVEERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPVMNRSAPQNHPGLVCQNPVQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPADMLGFGSPAGPQSQLSAPATTDSLHMGKIG
What is the function of this protein?
Transcription factor acting negatively in the phytochrome B signaling pathway to promote the shade-avoidance response.  Regulates PHYB abundance at the post-transcriptional level, possibly via the ubiquitin-proteasome pathway.  Promotes ethylene activity in the dark.  May regulate the expression of a subset of genes by binding to the G-box motif.  Might be involved in the integration of light-signals to control both circadian and photomorphogenic processes.  Activated by CRY1 and CRY2 in response to low blue light (LBL) by direct binding at chromatin on E-box variant 5'-CA[CT]GTG-3' to stimulate specific gene expression to adapt global physiology (e. g.  hypocotyl elongation in low blue light) (PubMed:26724867).
What are the official names of this protein?
Transcription factor PIF5, Basic helix-loop-helix protein 65, AtbHLH65, bHLH 65, Phytochrome interacting factor-like 6, Phytochrome-interacting factor 5, Transcription factor EN 103, bHLH transcription factor bHLH065.
Protein: RIMM_STAES
Sequence: MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y344_METJA
Sequence: MAVLASSTEPEPTESLLQQTNELLIIGKGAIVYKEFTTGVDARIIDSQTIGIGIPFNYYPFMCMVLDDAGNGIPMQEFTSAPGSLTVKVAATLDSTKTYKIIAFLIGDSMKIITSIQSQSGTVTEIAPGFGIFKVIYNDTEGTDTLTINYDDGTSETITVDKSNLWTVLPMQLPDAERVA
What are the official names of this protein?
Uncharacterized protein MJ0344.