PharMolix/UniProtQA huggingface dataset:
Protein: TRMD_LEUMM
Sequence: MRIDVLSLFPDMFAPMRQSIIGKAIDKGALDFQVTDFRDFTENKHNNVDDYPFGGGAGMLLTPQPIFDAMASVEKQAGGKGRVILLDPAGRQFNHEVAQELATYDHLTFVAGHYEGYDERIRELVDDEISLGDYVLTGGELGAMVIIDATVRFLPEILGNAASAEGDSFEDGLLEFPQYTRPADFRGRMVPEVLTSGNHAKIAEWRLKESLRRTYLRRPDLLEKRQLTQQERDLLDNIKSEEQ
What is the function of this protein?
Specifically methylates guanosine-37 in various tRNAs.
What are the official names of this protein?
tRNA (guanine-N(1)-)-methyltransferase, M1G-methyltransferase, tRNA [GM37] methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase TrmD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: THTR1_MYCBO
Sequence: MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS
What is the function of this protein?
May be a sulfotransferase involved in the formation of thiosulfate.
What are the official names of this protein?
Putative thiosulfate sulfurtransferase 1, Rhodanese-like protein 1.
Protein: MNMC_VIBC3
Sequence: MFIMSSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFAQKLHKHYPLAIPECQRIVLDDGLITLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSKNPEMWNQGLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGSLSEKVPYTNIAPEFRFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCADEKPAQGASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQLMWDEKATDKLKSMLEGDFPTQLVRGLSAEQTNQQVGVPVDKASVHYPLGGWLCPAELTQGLIHLLAQQGKLTAHYQTPIDELTWQPETQLWQLRSGDTLMSHQCVVIASGHQFDSLSQTAELPLGKVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATFDPQAQRENAQKLIHCLPEQTWPLEVDVGGNQSRQGVRCVSRDHLPFVGNVGEFSKITEQYRDLAQQQEAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPLGVDLLEQLHPSRMWVRKLRKGKALTQKV
What is the function of this protein?
Catalyzes the last two steps in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA.  Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34.
What are the official names of this protein?
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, tRNA mnm(5)s(2)U biosynthesis bifunctional protein.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the DAO family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PBX1_XENLA
Sequence: MDDQPRLMHSHPGVGMAGHPSLSQHMQDGTGANEGDVGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPSDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGAGADNSTEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCAITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVNATNVSVHGSQANSPSTPSSAGGYPSPCYQSDRRIQ
What is the function of this protein?
Acts as a transcriptional activator in complex with isoform 2 of meis1, to induce posterior neural and neural crest gene expression, and thereby specify hindbrain and neural crest cell fate.  Binds to a highly conserved region in the promoter of the neural crest gene zic3.  Required for the nuclear transport or retention of isoform 2 of meis1.
What are the official names of this protein?
Pre-B-cell leukemia transcription factor 1, Xpbx1, Homeobox protein pbx1, Pre-B-cell leukemia transcription factor 1b, Xpbx1b.
What is the protein family that this protein belongs to?
Belongs to the TALE/PBX homeobox family.
What are the subcellular locations of this protein?
Nucleus.
Protein: SECBL_MYCS2
Sequence: MIERDGAPTFEDVQELLNRSELTDVALYEHAGRRVDDAVDDEFSLQVLTRVGDTEFEIRCKVTAAGHGGQYLADAGAVFTLQSAAKIEEGTAREFAEKVGVMAVYPYLRAAVSQSAASLGLDRPILPLLRAGGVKLTESMDSAEDA
What is the function of this protein?
Chaperone component of an orphan antitoxin chaperone (AC) system; there is no toxin gene in close genomic proximity.  When expressed in E. coli complements the cold-sensitive phenotype of a secB deletion, suggesting it may have a generic chaperone function.  Does not however complement the toxin-neutralizing effect of its M. tuberculosis paralog Rv1957 (AC P95257) in E. coli, probably because the antitoxin genes are not from the same family.
What are the official names of this protein?
SecB-like chaperone SmegB.
What is the protein family that this protein belongs to?
Belongs to the SecB-like family.
Protein: Y2441_SHEPA
Sequence: MAFWDEKTLAQMNTEEWESLCDGCGKCCLNKLIDDETEELYYTNAACQLLDNKAGHCKSYEQRFNFVPSCTKVTVDNLESLTWLPDSCAYRRLLQGRELPSWHPLRTGSKEAMILAGMSVAGKVTCETKIRDIEDHIVLWPMKDVE
What are the official names of this protein?
UPF0260 protein Spea_2441.
What is the protein family that this protein belongs to?
Belongs to the UPF0260 family.
Protein: RF3_NITEC
Sequence: MTIDHEVKRRRTFAIISHPDAGKTTLTEKLLLFAGAIHIAGSVKARKASRHATSDWMEIEKQRGISVASSVMQMEYRGCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAANGVESQTLRLLQVCRARNTPIITFVNKLDREVREPLDLIDEIERTLGMDVVPFTWPVGSGKRFHGVYDLRHELMRVFRPGMDHAEQKDTTIITDLGDPAVTKRFGANLEQARQEIDLIKGAAPEFDQAAFLAGQQTPVFFGSAINNFGVQEVLDTLVDLAPPPGTRKAIQREILPTENKFSGVVFKIQANMNPAHRDRIAFVRICSGEFRRGMSLKVVRSGKDVRTSTVVSFLSQRRELLETAYAGDIIGIPNHGTLQLADTLTEGDNLQFTGLPFFAPEIFQTVEIADPLRSKQLKLGLTQLGEEGAIQVFRPHLGSILLLGAVGQLQFEVVTHRLKHEYGVEARVAPAKYQLARWVTAEMPRELQRFIDANTHRIAYDAVDAPTFLASFSAEISVAEENWPGIRFHKMREHAGLLFQTAS
What is the function of this protein?
Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2.  It binds guanine nucleotides and has strong preference for UGA stop codons.  It may interact directly with the ribosome.  The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.
What are the official names of this protein?
Peptide chain release factor 3, RF-3.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ARGC_AZOPC
Sequence: MVKVGIIGGGGYTAGELIRLLINHPNVNIIFVHSYSNARNKIIDIHTGLIGEMDLIFSDSYDLNEIDVLFLCSAHGDSKKFIETHTIHTELKIIDLSIDFRHKENAGGFVYGLPELNKEIIRKAQYIANPGCFATAVQLALLPLAKKNLLRSEIHINAITGSTGAGVRPTASSHFSWRNNNISVYKAFTHQHLKEITESLNYEPSRFNFIPVRGNFSRGIFATVYTESNLDIKDAVQIYSNYYEDSAFTFISDKNPDLKQVINTNKCILHLEKHGNKLFIISIIDNLLKGASGQAVQNFNLICGLNEKTGLFLKANAF
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
What are the official names of this protein?
N-acetyl-gamma-glutamyl-phosphate reductase, AGPR, N-acetyl-glutamate semialdehyde dehydrogenase, NAGSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATG7_PICST
Sequence: MSDSDKTAARVAPKYVPISSFVESSFFTKLSELKLNEFKLDSSKRDIHGFITSPRRLNKFNDQPTLNLDLQSFDIAEKEANNLHISGELYNVNTIEEFKNINKSDLLNDWGKEVYTRLIQTESLDYKAFNWFFILTFSDLKKYKFYYWVAFPTLNAPWFVTSTRDDSLVEKHTKNITRLLENDGDSENLAFSQLYQVVGESYLDLNSIRSSRNGVFVFLDGCLNKETKPSVQLKNYLYFLAYKGFEDVDVIVYRNDGSSFQVHYELDTDSFNKNVQPKITGWERTSQGKLGPKLADLGSLINPHQLADQAVDLNLKLMKWRIAPELNLDIVKEQRVLLLGAGTLGSYVARALMGWGVRKITFVDNGRISYSNPVRQPLFSFKDCFSDNGQGEMKAARAAEALKEIFPGVSSEGISLEVPMIGHPVSDEAKSKSNFGTLSQLFDDHDIIYLLMDSRESRWLPTVLGYAKNKIVINAALGFDSYLVMRHGNLSQPEESRLGCYYCNDVVAPNDSLTDRTLDQMCTVTRPGVALMASALAVELLVSILQHPDGSKAAQDESTKFGGVPHQIRGFLHNFQQTKLYAPNYKHCSACSHTVISKFEEEGWEFVKKCLNDSGYLEEICGLKQVQEEAEKATEDLMKDMDLDDEDSEWLD
What is the function of this protein?
E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy.  Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine.  Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes.  Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation.  Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirements and preventing excess ROS production.  Plays a role in the regulation of filamentous growth and chronological longevity (By similarity).
What are the official names of this protein?
Ubiquitin-like modifier-activating enzyme ATG7, ATG12-activating enzyme E1 ATG7, Autophagy-related protein 7.
What is the protein family that this protein belongs to?
Belongs to the ATG7 family.
What are the subcellular locations of this protein?
Cytoplasm. Preautophagosomal structure.
Protein: RNPH_BURTA
Sequence: MTNSSPRPSGRRADQLRDVRITRHYTKHAEGSVLVEFGETKVICTASVVERVPEFLRERGQGWLTAEYGMLPRATHTRSDREAARGKQTGRTQEIQRLIGRALRAVFDLNALGPRTLHLDCDVIQADGGTRTASITGAFVAAHDAVTKLVAAGKIARSPITDYVAAISVGVFGGAPVLDLDYDEDSACDTDMNVVMTGAGGFVEVQGTAEGVPFSRAEMNALLDLAQAGIGELVRLQRAALEA
What is the function of this protein?
Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation.  Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important.  Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
What are the official names of this protein?
Ribonuclease PH, RNase PH, tRNA nucleotidyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNase PH family.
Protein: GRPE_CHLPB
Sequence: MTKKTSHHKAEQKEKRAGEESGRESEVLDHKIEELENELIGAREQADKLREELLRKAAEFENFRRQKEREALMAGSRTLETVIRELLPFVDDVVRIVEHAPELLEKTEDARPYVDGAELLKKNLVRWLEDKGVTRIDALGKKMDVNLHEAITQVEYPDVEPETVVEVFQDGYVLGDRVLRHTKVVVAK
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE.  It is the nucleotide exchange factor for DnaK and may function as a thermosensor.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.
What are the official names of this protein?
Protein GrpE, HSP-70 cofactor.
What is the protein family that this protein belongs to?
Belongs to the GrpE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VATE_METAR
Sequence: MGLDKVVKDIMDKAEADSRDITAKAAAEAAEIKKSAEAEAKQIIAAENARAEQAISKMRQRELSSAKLDVKKAKLNSEKDVLAETHEAFVRQLSTLPREKKADLLQKLVKLAKKDIPQGKIFTNAADADLVKDSGYEYGGNVKCIGGIVVTSVDGSVNLDYTFDSILEDVWTSSMKPVSDILFGSR
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
V-type ATP synthase subunit E, V-ATPase subunit E.
What is the protein family that this protein belongs to?
Belongs to the V-ATPase E subunit family.
Protein: NDUB2_ARATH
Sequence: MGGGGHGGGITYKGVTVHTPKTWHTVTGKGLCAVMWFWILYRAKQDGPVVMGWRHPWDGHGDHGHGDHH
What is the function of this protein?
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.  Complex I functions in the transfer of electrons from NADH to the respiratory chain.  The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
What are the official names of this protein?
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2.
What is the protein family that this protein belongs to?
Belongs to the complex I NDUFB2 subunit family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: MNME_MARMS
Sequence: MTDFQYATDQDTIAAQATAPGRGGVGIIRLSGPKSLAIAKQIIGFEPKPRYAHYVPFKTTGQEQLDEGIALYFPGPNSFTGEDVFELQGHGGPVIMDMLLSHCVALGARLARPGEFSERAFMNDKMDLTQAEAIADLIDSTSEQAAKCALRSLQGAFSKRVDELVEALIHLRIYVEAAIDFPEEEIDFIGDGKVAAELAGIQAKLAEVLKEANQGALIREGMNVVIAGRPNAGKSSLLNALSGKESAIVTNIEGTTRDVLREHIHLDGMPLHIIDTAGLRDSPDEVERIGIQRAWDEISKADRILMMVDSQSIDSKDPNEIWPEFMEKLGDTKHLTLVRNKVDLTKEGTGIETVSGVPVVSLSAKTGEGVTDLTEHLKAVMGFDSTTEGGFIARRRHIEALNKANRFLDAGNEQLHGYGAGELLAEDLKEAQQALSEITGAFTSDDLLGRIFGSFCIGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y685_PYRNV
Sequence: MKVEAVVEVRYTEDKAKVLKALENVFTPKRVEERESDSGMLLVASCEGAGCLEKLRSAIWRQGIQDAARSVLSKGVVGEDTVVFSVNKQAAYVGVVSFVTEPGESPLGPITFTVKTNNVRQFLDWLAPRTYRGRVYYEAPPPD
What are the official names of this protein?
UPF0201 protein Tneu_0685.
What is the protein family that this protein belongs to?
Belongs to the UPF0201 family.
Protein: IDI2_BACSU
Sequence: MTRAERKRQHINHALSIGQKRETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKAPLVIKGETHHWLTERGVNTSSYSVR
What is the function of this protein?
Involved in the biosynthesis of isoprenoids.  Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
What are the official names of this protein?
Isopentenyl-diphosphate delta-isomerase, IPP isomerase, Isopentenyl diphosphate:dimethylallyl diphosphate isomerase, Isopentenyl pyrophosphate isomerase, Type 2 isopentenyl diphosphate isomerase, IDI-2.
What is the protein family that this protein belongs to?
Belongs to the IPP isomerase type 2 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YH034_YEAST
Sequence: MWVRSNYSCFSSEPVSCSISSSSFSGLITATSTVNSLSPKTLPLNSSALASISTFSPLKVTNAIPLLAESDVKILPVCWSLIFLIGKEMESASVPKNSATSSLVALNGTLLIYKVSFDLSIWSNGIFSLFCPLKPPLAPPLPLKFPLPLKPPL
What are the official names of this protein?
Putative uncharacterized protein YHL034W-A.
Protein: CLD11_HUMAN
Sequence: MVATCLQVVGFVTSFVGWIGVIVTTSTNDWVVTCGYTIPTCRKLDELGSKGLWADCVMATGLYHCKPLVDILILPGYVQACRALMIAASVLGLPAILLLLTVLPCIRMGQEPGVAKYRRAQLAGVLLILLALCALVATIWFPVCAHRETTIVSFGYSLYAGWIGAVLCLVGGCVILCCAGDAQAFGENRFYYTAGSSSPTHAKSAHV
What is the function of this protein?
Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity.
What are the official names of this protein?
Claudin-11, Oligodendrocyte-specific protein.
What is the protein family that this protein belongs to?
Belongs to the claudin family.
What are the subcellular locations of this protein?
Cell junction, tight junction. Cell membrane; Multi-pass membrane protein.
Protein: ERA_CLOB8
Sequence: MFKSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGIHKPKHKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDKKCPVFLVLNKVDESTQDRVAKSLEMYSKEFKFAEIVPISAIKGKNVDVLVELMKKAMPEGPKYYPDDMITDVQEKFVVSEIIREKALRTLRDEVPHGIAVDIIQMKQNEIGTYHIEVDLICEKDSHKGIIIGKNGQTLKRIGENSRYELERFLRSKVNLKIWVKVRKEWRDNQLLLKELGYKANSKK
What is the function of this protein?
An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange.  Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
What are the official names of this protein?
GTPase Era.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
What are the subcellular locations of this protein?
Cytoplasm. Cell membrane; Peripheral membrane protein.
Protein: FABPL_RAT
Sequence: MNFSGKYQVQSQENFEPFMKAMGLPEDLIQKGKDIKGVSEIVHEGKKVKLTITYGSKVIHNEFTLGEECELETMTGEKVKAVVKMEGDNKMVTTFKGIKSVTEFNGDTITNTMTLGDIVYKRVSKRI
What is the function of this protein?
Plays a role in lipoprotein-mediated cholesterol uptake in hepatocytes (By similarity).  Binds cholesterol (PubMed:25732850).  Binds free fatty acids and their coenzyme A derivatives, bilirubin, and some other small molecules in the cytoplasm.  May be involved in intracellular lipid transport (By similarity).
What are the official names of this protein?
Fatty acid-binding protein, liver, Fatty acid-binding protein 1, Liver-type fatty acid-binding protein, L-FABP, Squalene- and sterol-carrier protein, SCP, Z-protein, p14.
What is the protein family that this protein belongs to?
Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PSAD_SYNEL
Sequence: MTTLTGQPPLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYDP
What is the function of this protein?
PsaD can form complexes with ferredoxin and ferredoxin-oxidoreductase in photosystem I (PS I) reaction center.
What are the official names of this protein?
Photosystem I reaction center subunit II, Photosystem I 16 kDa polypeptide, PSI-D.
What is the protein family that this protein belongs to?
Belongs to the PsaD family.
Protein: MDM12_CHAGB
Sequence: MSIDLNWETVTGGPDGQELADQIRDFIHTKFQSVPLPRFIKSVTVHDFQFGVIPPELELKDITDPLPDFYEDHVDSDVASDDSEGEEDAVDNNLAPPSQGERHQRTDDSEALGGDVRNLGHLPPHLMFGSPGGPGGPGMGSLRNGDMGSPFMRVSTPGIPGGTSNLHYFHSHLGGGLSGTQTPLAAVAGAQHLSTANWLEGHGHSSSVPNLTHFGNPGGAGTSPRRQPERNHSRNPSQGSISVADLNPNSLAPPSSSTLGVPSLKEKHSTTPAPGSATALSGSNEQQQQQQPQDNDDGHPRWREQRIDDMQAVFRIRYAGDVKLLLTADILLDYPMPSFVGIPVRLSITGLTFDGVGVLAKIRKRVHFCFLSPEDAAAAVGGDGEEGLSSPGEGPSQAQGQGQGQGQGQGQGQTPGAGQQKQQKKQAGWVGSGNTKLGGLLQEIRVESEIGQRESGRQSLKNVGKVERFVLEQVRRIFEEEFVYPSFWTFLV
What is the function of this protein?
Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria.  Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria.  MDM12 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.  The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all mitochondrial outer membrane beta-barrel proteins, and acts in a late step after the SAM complex.  The MDM10-MDM12-MMM1 subcomplex further acts in the TOM40-specific pathway after the action of the MDM12-MMM1 complex.  Essential for establishing and maintaining the structure of mitochondria and maintenance of mtDNA nucleoids.
What are the official names of this protein?
Mitochondrial distribution and morphology protein 12, Mitochondrial inheritance component MDM12.
What is the protein family that this protein belongs to?
Belongs to the MDM12 family.
What are the subcellular locations of this protein?
Mitochondrion outer membrane; Peripheral membrane protein; Cytoplasmic side. Endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side. Note=The ERMES/MDM complex localizes to a few discrete foci (around 10 per single cell), that represent mitochondria-endoplasmic reticulum junctions. These foci are often found next to mtDNA nucleoids.
Protein: MLH1_ARATH
Sequence: MIDDSSLTAEMEEEESPATTIVPREPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIHYNNVSFSCRKHGAVKADVHSVVSPSRLDSIRSVYGVSVAKNLMKVEVSSCDSSGCTFDMEGFISNSNYVAKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQEQKVEYIQSTLTSQKSDSPVSQKPSGQKTQKVPVNKMVRTDSSDPAGRLHAFLQPKPQSLPDKVSSLSVVRSSVRQRRNPKETADLSSVQELIAGVDSCCHPGMLETVRNCTYVGMADDVFALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILLALKEEDLDPGNDTKDDLKERIAEMNTELLKEKAEMLEEYFSVHIDSSANLSRLPVILDQYTPDMDRVPEFLLCLGNDVEWEDEKSCFQGVSAAIGNFYAMHPPLLPNPSGDGIQFYSKRGESSQEKSDLEGNVDMEDNLDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPASMASNGTFVKVASLEKLYKIFERC
What is the function of this protein?
Involved in DNA mismatch repair (MMR), correcting insertion-deletion loops (IDLs) resulting from DNA replication, DNA damage or from recombination events between non-identical sequences during meiosis.  Component of the MutLbeta heterodimer, which probably forms a ternary complex with the MutSbeta heterodimer that initially recognizes the DNA mismatches.  This complex is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis.  Plays a major role in promoting meiotic crossing-over and is involved in maintaining the genetic stability of simple sequence repeats by correction of frameshift intermediates.
What are the official names of this protein?
DNA mismatch repair protein MLH1, MutL protein homolog 1, Protein MUTL-HOMOLOGUE 1, AtMLH1.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutL/HexB family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RK16_PIPCE
Sequence: MLSPKRTRFRKQHRGRMKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMARYARRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVSVVKPGRILYEIGGISETVARAAISIAASKMPIRTQFVIAG
What are the official names of this protein?
50S ribosomal protein L16, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL16 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: NIFS_RHOCA
Sequence: MTQPAIYLDNNATTRVFPEVVAAMLPYFTEHFGNASSGHGFGAQAGLGLRKARLAVAALIGAASEQEILFTSGGTEANTTAIRSALAVQDGRREIIISAVEHPAILMLAADLEKTEGVRVHRIPVDHLGRLDLAAYRAALSDRVAVASIMWANNRYDLPVPQLAAEAHAAGALFHTDAVQAVGKLPMSLADTEIDMLSLSGHKFHGPKGVGALYLRKGVAFRPLLRGGKQERGRRAGTENVPALVGMGLAAEIVAARMAADLSRIATLRDWLESGILALGGCQRLGDPANRLANTCTLAFDRIDSEAVLTKLARAGIAISTGSACASGAMEPSHVTRAMAVPFTAAHGVVRFSLSADTTAAELSRVLAILPEILAELRPVPVTA
What is the function of this protein?
Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.  Seems to participate in the biosynthesis of the nitrogenase metalloclusters by providing the inorganic sulfur required for the Fe-S core formation.
What are the official names of this protein?
Cysteine desulfurase, Nitrogenase metalloclusters biosynthesis protein NifS.
What is the protein family that this protein belongs to?
Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
Protein: FLGG_SALTY
Sequence: MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL
What are the official names of this protein?
Flagellar basal-body rod protein FlgG, Distal rod protein.
What is the protein family that this protein belongs to?
Belongs to the flagella basal body rod proteins family.
What are the subcellular locations of this protein?
Bacterial flagellum basal body.