PharMolix/UniProtQA huggingface dataset:
Protein: GBDR_PSEAB
Sequence: MTTYAPGVPPQNRNPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLSLDGRQVWASDGLQITPDAGTDNAPAVDCVIVCGGVGIQRSVTREHVTFLQAQARQGRRLGAVCTGSWALARAGLLDGYDCSVHWECLAAMQEAFPRVAMSTRLFSIDRNRFTSSGGTAPMDMMLHLIGREHGRELSAAISEMFIYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVNVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTSMSIIEVASVCGFVSTPHFSKCYREYFGIPPRDERQGQPLGQPVVLMPIPQDLALMPNSSALSALSQAQGESTFASVRI
What is the function of this protein?
Specific regulator of choline metabolism, which activates transcription of at least 25 genes from 11 promoters in response to choline metabolites (PubMed:24097953).  Required for the induction of plcH, encoding the phospholipase C, and pchP, encoding the phosphorylcholine phosphatase, in response to glycine betaine (GB) and dimethylglycine (DMG) (PubMed:19103776).  Also controls the expression of gbcAB and dgcAB, which are required for GB and DMG degradation, respectively, in response to both GB and DMG (PubMed:17951379).  The GbdR regulon also includes genes encoding sarcosine, glycine and serine catabolic enzymes, the BetX and CbcXWV quaternary amine transport proteins and the acetylcholine esterase gene, choE (PubMed:24097953).  Acts by binding directly to the promoter region of the genes (PubMed:24097953).  May play an important role during P. aeruginosa interactions with eukaryotes (PubMed:17951379).
What are the official names of this protein?
HTH-type transcriptional regulator GbdR, Glycine betaine/dimethylglycine responsive regulator.
Protein: AROE_OCEIH
Sequence: MTLSLKLIGYPIEHSMSPWIHNEFLKRSNLEGTYELFEISPEESFEDNVTTLKKSVLTGFNVTVPYKQKIMQFLDEVDDTANLMGAVNTVSIRDGKWIGYNTDGIGYLRSLYAAYPFLKGVTNKRVLILGAGGAARGIFHALVNEGYNNIKIANRTLSRAESIIGTNKQALAISLEEAAEELHQFDLVIQTSAVGMNEPRSIIILDRINEDTVVSDIVYQPLETHFLQLAKQRTPYIHHGHTMLLYQAQAAFEIWTGTNVNVSGMDMQIEQILKGR
What is the function of this protein?
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids.  Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
What are the official names of this protein?
Shikimate dehydrogenase (NADP(+)), SDH.
What is the protein family that this protein belongs to?
Belongs to the shikimate dehydrogenase family.
Protein: RBFA_SYNR3
Sequence: MAHGRRVERVASMIRREMSELLVNGVRDERVNQGMVSITNVVVAGDLQHCKVSVSIFGSESEQDQAMAGLRSAAPYLRGELSRRLNMRRTPELVFHHDKGLAQGVEVLGLLSKLEEERQERGPVPDGSEEM
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes).  Required for efficient processing of 16S rRNA.  May interact with the 5'-terminal helix region of 16S rRNA.
What are the official names of this protein?
Ribosome-binding factor A.
What is the protein family that this protein belongs to?
Belongs to the RbfA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ACSA1_ARATH
Sequence: MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDKDNWSD
What is the function of this protein?
Involved in UV-B tolerance and genome integrity.  In association with DDB2, is necessary for repair of UV-B-induced DNA lesions.
What are the official names of this protein?
WD repeat-containing protein ATCSA-1, Cockayne syndrome WD repeat protein CSA homolog.
What are the subcellular locations of this protein?
Nucleus. Note=Localizes in a speckled pattern.
Protein: HLDE_ALISL
Sequence: MKPTLPNYDQSGVLIVGDVMLDRYWVGPTSRISPEAPVPVVKVENNEERPGGAANVAMNVAALGGQAHLVGLVGEDEPAQALTTTLESLKVHCDFVALPNFPTITKLRVMSRGQQLIRLDFEESFHDIPAEPIISRMQATLPKVKAVVLSDYAKGALEHVQLMIQEARKAGVPVFIDPKGADFERYRGATLLTPNMLEFETVVGKVKDEEDLVVKGQQIIEEFDFEALLVTRSEHGMTLLRSDMAPLHLPTQAREVFDVTGAGDTVISVLAASVSTGKPLDEACALANAAAGVVVGKLGTSTLSTIELAEAIHGSQDSGFGIINEELLISAVKQARERGEKVVMTNGCFDILHAGHVYYLNHAAELGDRLIVAVNTNESVQRLKGPGRPINPTDRRMAVLAGLGAVDWVVPFSEDTPQRLISEVLPTLLVKGGDYEIKDIAGGAEVIAAGGEVKVLNFEDGCSTTGIIEAIKGGRG
What is the function of this protein?
Catalyzes the ADP transfer from ATP to D-glycero-beta-D-manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
What are the official names of this protein?
Bifunctional protein HldE.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the cytidylyltransferase family.
Protein: YGIB_SALNS
Sequence: MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGLAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDAAGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTSTRSMGG
What are the official names of this protein?
UPF0441 protein YgiB.
What is the protein family that this protein belongs to?
Belongs to the UPF0441 family.
Protein: SYP_ERWT9
Sequence: MRTTQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEISMPVVQPADLWQESGRWEQYGPELLRLVDRSDRPFVLGPTHEEVITDLIRNELSSYKQLPLNLFQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTSQGSLQETYDAMYRAYSQSFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDIVFSTGSDYAANIEMAEALPPAGGRADATQERVQFATPEAKTIADLVEQFTLPIEKTVKTLMVKATKESGHTLVALLVRGDHELNEIKAEKIDIVAAPLTFATEEEIRALVNAGPGSLGPVGLNMPIVADRTVAAMSDFSAGANIDGQHFSGINWQRDLPLPRIADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKASVQGEDGRNQTLTMGCYGIGITRIVAAAIEQNHDERGIIWSPALAPFQVAILPMNMQKSFRVKELAEALYQQLRAKGIDVILDDRKERPGVMFADMELIGVPHTIVIGERNLDNDEIEYKARRGGEKRLIKTDEIVDFLMAELAQ
What is the function of this protein?
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).  As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine.  One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP.  The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro).  The misacylated Cys-tRNA(Pro) is not edited by ProRS.
What are the official names of this protein?
Proline--tRNA ligase, Prolyl-tRNA synthetase, ProRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: IF2B3_MOUSE
Sequence: MNKLYIGNLSDHAGPADLESVFKDAKIPVAGPFLVKTGYAFVDCPDEGWALKAIEALSGKMELHGKPMEVEHSVPKRQRIRKLQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNTDSETAVVNVTYSSKDQARQALDKLNGFQLENFTLKVAYIPDETAAQQNPSPQLRGRRGPGQRGSSRQASPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQSGPPQSRRK
What is the function of this protein?
RNA-binding factor that may recruit target transcripts to cytoplasmic protein-RNA complexes (mRNPs).  This transcript 'caging' into mRNPs allows mRNA transport and transient storage.  It also modulates the rate and location at which target transcripts encounter the translational apparatus and shields them from endonuclease attacks or microRNA-mediated degradation.  Preferentially binds to N6-methyladenosine (m6A)-containing mRNAs and increases their stability (By similarity).  Binds to the 3'-UTR of CD44 mRNA and stabilizes it, hence promotes cell adhesion and invadopodia formation (By similarity).  Binds to beta-actin/ACTB and MYC transcripts (By similarity).  Increases MYC mRNA stability by binding to the coding region instability determinant (CRD) and binding is enhanced by m6A-modification of the CRD (By similarity).  Binds to the 5'-UTR of the insulin-like growth factor 2 (IGF2) mRNAs.
What are the official names of this protein?
Insulin-like growth factor 2 mRNA-binding protein 3, IGF2 mRNA-binding protein 3, IMP-3, mIMP-3, IGF-II mRNA-binding protein 3, VICKZ family member 3.
What is the protein family that this protein belongs to?
Belongs to the RRM IMP/VICKZ family.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm. Cytoplasm, P- body. Cytoplasm, Stress granule. Note=Found in lamellipodia of the leading edge, in the perinuclear region, and beneath the plasma membrane. The subcytoplasmic localization is cell specific and regulated by cell contact and growth. Localized at the connecting piece and the tail of the spermatozoa. In response to cellular stress, such as oxidative stress, recruited to stress granules.
Protein: RPO10_PYRAB
Sequence: MIVPVRCFTCGKVIGDKYYEFKRRVEAGEDPEKVLDDLGLERYCCRRMLLSHVELIDDIMHYRVY
What is the function of this protein?
DNA-dependent RNA polymerase (RNAP) catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit Rpo10, DNA-directed RNA polymerase subunit N.
What is the protein family that this protein belongs to?
Belongs to the archaeal Rpo10/eukaryotic RPB10 RNA polymerase subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CISY2_ARATH
Sequence: MEISQRVKARLAVLTAHLAVSDTVGLEQVLPAIAPWCTSAHITAAPHGSLKGNLTIVDERTGKKYQVPVSEHGTVKAVDLKKITTGKDDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSTFIEVAYLLMYGNLPSQSQLADWEFTVSQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALSGQDIYKSKQVRDKQIVRILGKAPTIAAAAYLRTAGRPPVLPSANLSYSENFLYMLDSMGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTACAGAVGALYGPLHGGANEAVLKMLAEIGTAENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLADEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRAMGFPPEFFTVLFAVPRMAGYLSHWRESLDDPDTRIMRPQQAYTGVWMRHYEPVRERTLSSDSDKDKFGQVSISNASRRRLAGSSAL
What is the function of this protein?
Peroxisomal citrate synthase required for the fatty acid respiration in seedlings, citrate being exported from peroxisomes into mitochondria during respiration of triacylglycerol (TAG).  Indeed, complete respiration requires the transfer of carbon in the form of citrate from the peroxisome to the mitochondria.
What are the official names of this protein?
Citrate synthase 2, peroxisomal.
What is the protein family that this protein belongs to?
Belongs to the citrate synthase family.
What are the subcellular locations of this protein?
Peroxisome.
Protein: UFL1_DROYA
Sequence: MGSGDWDEIKRLAADFQKAQLTSTLQKLSERNCVEIVTLLLEKQMLEVVFTNDGKEYITPDHLEREIQDELYVNGGRANLVEVSKTLNVDLSRIEVLAERIAAENPSVHLVLGQLIDEDYISHIAQEINEKLVLRGEISISELASQFDLPSDFLQHDVVEKHLGKIIKGRQDASNPRVFFTQAYIQRCKAKIRGALAAITRPINVAVILQQIGVQEKIFHSLLDEIAPAGQVTSKLANSQYVPLIYAKTQADWVNSFYKQNSFLEYDAIQKLGISDAKSYIRKQFPNEEFLFLKRVALGARLVELTVVTALNECSATKQYLDLTTILPSNLSEEDIEEVFSTIMGQKHSNPNNFVYLDSIVFSQPYLAQLVQPCQALAESQAKAAVDGGVYQQYIVEKTLAQKGSVSTQELEDDGKVDKRDERRKKASSGKAGGGAQGRETKTKSTKKHQRGKAAAHNDSDDEDDVQQSSRGGGAGNKKAMKPLELVKTADIVKLITASLEEEGLEHLAKPISALYTNQFNQTALARAQELFEATPQTNRRQTHAAIQDRINTFLIDIRLYEKGLKLFPLETQTQLVKYLLKSLGNDICNELSLYVAGECNLTVKNTNLNVDQRIKLAQECEVQYRASLLEQNKALNKTIDEFELATETVLKACSMIIKKVDKKKDRLLIADHKKKLQNQLLECQEPALLLHLAVLILFTTITGSILHASGKFVSAILQHIRGSLNDEQNALLLRYHDLVLQVLQATPDSSESKVANEHLQAMQVQVVELAQNFSRASVFKADC
What is the function of this protein?
E3 UFM1-protein ligase that mediates ufmylation of target proteins.
What are the official names of this protein?
E3 UFM1-protein ligase 1 homolog, E3 UFM1-protein transferase 1 homolog.
What is the protein family that this protein belongs to?
Belongs to the UFL1 family.
Protein: WRKY1_DICDI
Sequence: MGAQYSTELNKYNNNNNNNNNNNNNNNNNNNNHTISGNENLNNNNNNNNNNNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNGNSNSNSNNNNNNNGINKYSNYFESLINNTNKDTNIPNNSNSNNNNSDRDFIQNMIKSANQIKPGEKELVLFHKLHQSLKENQSFSIEELRNSSILSISPDKSFLTNINEINVNNNNNNNNNNNENNKVGVNGSSTTTTTTTTTTTNNNSNNNNNNNNNNNNNNNNNNNNNEDDEDDYGDDDTIENNEPTFVDKPNKSAKLQKPKLKSNLNDTNGGNSPQQNGKISKYMAKKLLALQQKQLEQEQEQKQQQKQQQQQQQQQQQQQQQQQQQQQKDAIENINNNNNNKLQPIVKNSVNKTTKQKKNKTTTHNVKQQITFLTKSDNEDEYDASDEYIDDDDDDDEKYDDDDDEYFEGNNNNNYKKNNISNKSKNKNNNDESDSFSESEIFKQKKLNHDKNQSNPKQQLTSHSEFDNSLLNKNQSRTNSKIQKLQIKEENYHQIQQEHGEKQQQQQQQQQQPQQQQQQQQQQQQQQQQEMQVDKEQTEKIINTNKKEEQKPNDYFPPIPTNPFKRDNETAFGKNNENNNNNNNNNNNNNNNNNNNNNNNNNNYRNNKPNGEGFLSNLKIIPPMISSSPYYSKKSSNVVPTSPKSNLSDQQPPFSPVQISPQKQSPATTTTTTTTTTPTPLKKQKKNKTNNNINNNNINNNNNNNNNNNNNNNNNNNNNNNNNNYSINNINNEEDEENNSTQNNNNNNNNNNNSPQNSNTNSNNSNNSNNSNNISNIVSDGYQWRKYGQKNVKGSLHPRHYYKCTFQGCNVRKQVERIGDTNQNSTVYKGEHCHGFPQTTRVVSDQQAFRNSVMFEGLDGNNNNNNNNNNNNNNYSSNSNSNGNGNGNGNGNGNGNGNGNGNSNGNQDQNGNSFNDQNGDSPTQHGQISPMNSPKNTIPTTTTTTTSISTYVNTNSTNKKNNSKQEKKISVKNETTDDDEFQEDIDQLSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDNNNNNNNNNNNNNNNRFNGTSESKGSKKLVIETGSSIDHLDDGFFWRKYGQKSVKGSPFPKSYFKCAELTCPVKKQVIQQDSKYINTYRGKHNHDPPESEAIEKRKKHFNGLYNNNNNNNNNNNNNNNNNNNNNNINNINNNNINNLNSLNNINNINNNNNSNQINNFSGSIQNNLKNILKEQLKEAGKLHNEIENNLIDD
What is the function of this protein?
Probable transcription factor.  Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
What are the official names of this protein?
Probable WRKY transcription factor protein 1, WRKY domain-containing protein 1.
What is the protein family that this protein belongs to?
Belongs to the WRKY group I family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PCOC_ECOLX
Sequence: MSILNKAILTGGLVMGVAFSAMAHPELKSSVPQADSAVAAPEKIQLNFSENLTVKFSGAKLTMTGMKGMSSHSPMPVAAKVAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
What is the function of this protein?
Required for the copper-inducible expression of copper resistance.
What are the official names of this protein?
Copper resistance protein C.
What is the protein family that this protein belongs to?
Belongs to the CopC family.
What are the subcellular locations of this protein?
Periplasm.
Protein: RL20_ALCBS
Sequence: MARVKRGVQARRRHKKILKQAKGYYGARSRVFRVAVQAVTKAGQYAYRDRKVRKRQFRRLWIVRINAAARLNGLSYSRLINGLKKASIDIDRKVLADIAVRDQATFSALAEKAKASLTA
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
Protein: SYH_PYRAB
Sequence: MIERVKGTRDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEEVVKQLYAFKDKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELIGSDKIEADAEVIALFVDSYLSTGLKDFTVNIGDRVLLDEFAKMLGVKDDIGLMRIIDKKDKLSQEEFLKALGEFGLDENGIEKVLNLIEIKGKPDDVLPLAEELFTSERAKEEISRLYNLVDILSWYEVDEWIQIDLGIARGFDYYTSIVFEAIVPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILEWKGLLPELKAGPDVFVIPVGDSRDVATAIVTRLRKAGIRSDIELSGRKLRKALDYANRIGVRLSIIVGKRDLERGVVTIRDLESGNQVEVPVDNVVTKVRELLNQ
What are the official names of this protein?
Histidine--tRNA ligase, Histidyl-tRNA synthetase, HisRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ARI1L_DANRE
Sequence: MDSDEGYNYEFDDEEEEEEEEEECSVDSGEEEAVDDSLELGEVELLDPAVAGGEPDDCADTGGGGPGPGQEDEDYRFEVLTTEQILQHMVECIRDVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLDKLFSECHVINPSKKPKTRPMSTRSSSQDLPCQICYLNYPNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
What is the function of this protein?
E3 ubiquitin-protein ligase, which catalyzes polyubiquitination of target proteins together with ubiquitin-conjugating enzyme E2 ube2l3.
What are the official names of this protein?
E3 ubiquitin-protein ligase arih1l, RING-type E3 ubiquitin transferase arih1l.
What is the protein family that this protein belongs to?
Belongs to the RBR family. Ariadne subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL9_CORGB
Sequence: MKLILTAAVENLGVAGDIVEVKNGYGRNLLLPRGLAIVATPGAEKQIEGIKRAQEAREIRDLDHAREVKAALEALEGVTIAVRTSESGKLFGSVKTDDIVDAVKAAGGPNLDKRAIVLPKNLVKTTGKYQVEAKLTDGIVSRVKFEVVAA
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: RS21_STAAT
Sequence: MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
What are the official names of this protein?
30S ribosomal protein S21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS21 family.
Protein: RNT_VIBC1
Sequence: MTIENEALTLKKRFRGYFPVVVDVETAGFNAQTDALLEICAVTLSMDENGDLHPASTIHFHIEPFEGANLEKEALEFNGIRDPFSPLRGAVSEQEALKEIYKLIRKEQKAADCSRAIMVAHNAAFDLSFVNAANERCKLKRVPFHPFATFDTATLSGLAYGQTVLAKACKAAGMEFDNREAHSALYDTQQTAELFCGIVNKWKALGGWPLVDEE
What is the function of this protein?
Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang.  Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A).  Also appears to be involved in tRNA biosynthesis.
What are the official names of this protein?
Ribonuclease T, Exoribonuclease T, RNase T.
What is the protein family that this protein belongs to?
Belongs to the RNase T family.
Protein: FUS_NDVH3
Sequence: MGSRSSTRIPVPPMLIIRIVLTLSCIRLTSSLDGRPLAAAGIVVTGDKAVNIYTSSQTGSIIVKLLPNMPKDKEACAKAPLEAYNRTLTTLLTPLGDSIRRKQESVTTSGGRRQRRFIGAIIGSVALGVATAAQITAASALIQANQNAANILRLKESIAATNEAVHEVTDGLSQIAVAVGKMQQFVNDQFNNTAQELDCIKITQQVGVELNLYLTELTTVFGPQITSPALTQLTIQALYNLAGGNMDYLLTKLGVGNNQLSSLIGSGLITGNPILYDSQTQILGIQVTLPSVGNLNNMRATYLETLSVSTTKGFASALVPKVVTQVGSVIEELDTSYCIGTDLDLYCTRIVTFPMSPGIYSCLSGNTSACMYSKTEGALTTPYMALKGSVIANCKMTTCRCADPPGIISQNYGEAVSLIDRHSCNVLSLDGITLRLSGEFDATYQKNISILDSQVIVTGNLDISTELGNVNNSISNALNKLEESNSKLDKVNVRLTSTSALITYIVLTVISLVFGVLSLVLACYLMYKQKAQQKTLLWLGNNTLDQMRATTKI
What is the function of this protein?
Class I viral fusion protein.  Under the current model, the protein has at least 3 conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state.  During viral and plasma cell membrane fusion, the heptad repeat (HR) regions assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain.  The formation of this structure appears to drive apposition and subsequent fusion of viral and plasma cell membranes.  Directs fusion of viral and cellular membranes leading to delivery of the nucleocapsid into the cytoplasm.  This fusion is pH independent and occurs directly at the outer cell membrane.  The trimer of F1-F2 (F protein) probably interacts with HN at the virion surface.  Upon HN binding to its cellular receptor, the hydrophobic fusion peptide is unmasked and interacts with the cellular membrane, inducing the fusion between cell and virion membranes.  Later in infection, F proteins expressed at the plasma membrane of infected cells could mediate fusion with adjacent cells to form syncytia, a cytopathic effect that could lead to tissue necrosis (By similarity).
What are the official names of this protein?
Fusion glycoprotein F0.
What is the protein family that this protein belongs to?
Belongs to the paramyxoviruses fusion glycoprotein family.
What are the subcellular locations of this protein?
Virion membrane; Single-pass type I membrane protein. Host cell membrane; Single-pass membrane protein.
Protein: HSL28_DICDI
Sequence: MTILSAITSITRPNKISKSVVSSNGGASLSLSSNSVACATACGGSSYSYSSSYSSSGLGYSYNSSYSSSVGYSSSVGVVIGSCGHCS
What are the official names of this protein?
HssA/B-like protein 28.
What is the protein family that this protein belongs to?
Belongs to the hssA/B family.
Protein: BIOA_HELPY
Sequence: MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDDLEHVLLASFSHKPIITLSQRLCQLTHMDKCFYADNGSSCVEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGDVKLYKDTYTPLLLKNLTTPVPKNDHEIENSLNALKRLLDKHSEEICAFIAEPLLQCAGNMHIYSARYLKQAVLLCKQKNIHIIFDEIATGFGRTGSMFAYEQCEIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSGFIFNTLQNALKPLMEQQVVSDLRHLGMVFAFEVFIQTKERLSLAVFKKTLKKGLLLRPLNNTIYLMPPYIITHEEVKKAVAGLVEILDELRKG
What is the function of this protein?
Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA).  It is the only aminotransferase known to utilize SAM as an amino donor.
What are the official names of this protein?
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, 7,8-diamino-pelargonic acid aminotransferase, DAPA AT, DAPA aminotransferase, 7,8-diaminononanoate synthase, DANS, Diaminopelargonic acid synthase.
What is the protein family that this protein belongs to?
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: BRK3_PELNI
Sequence: RPPGFSPFRVAPAS
What is the function of this protein?
Induces smooth muscle contraction.  May target bradykinin receptors (BDKRB).
What are the official names of this protein?
Bradykinin-like peptide 3.
What is the protein family that this protein belongs to?
Belongs to the bradykinin-related peptide family.
What are the subcellular locations of this protein?
Secreted.
Protein: FBK85_ARATH
Sequence: MKRQAKPPEKKTKRTTNASSPTPSSSSPSLSSLPDEIVENCLARISRSYYPTLSIVSKSFRSIISSTELYVARSHLRNTEECVYVCLSDKSFEFPKWFTLWVNPNQANSMVEKKRKKKKTIGKLLVPIPSSNLSPVSKSAIAVGSEIYVIGGKVDGALSSAVRILDCRSNTWRDAPSMTVARKRPFICLYDGKIYVIGGYNKLSESEPWAEVFDIKTQTWECLSDPGTEIRNCTIYRIAEIEGKIHFGYTQKTYAYDPKQGEWECCEGEVAFPRSQCVMESVLYTFANNYTWEDDYGCKWWSTDGYGEKVKGLESLLEIHKRNGGSSDNTTKLVACGGKLLLLWEGYMKHNPNNRKKIWCAVIALEKRDGGKVWGIVEWVDVVHIVPTSCKLLHCLVVSV
What are the official names of this protein?
F-box/kelch-repeat protein At4g19870.
Protein: PCKA_RHILO
Sequence: MSEVGKRNPACPIDRIGLKTTGMVRYNFGAAALYEEAIRRGEARLTAHGALVAETGQHTGRSPKDKFVVRDAATEPEVWWDNNKAISPAQFETLFADFLAHAANKDLYVQDLVGGADAELKLPTRVITEFAWHSLFIRNLLIRPDKAELGQFVPEMTIIDLPSFRADPARHGSRTETVIAVDLTRQIVLIGGTSYAGEMKKSVFTMLNYILPQKGVMPMHCSANEGPAGDAAVFFGLSGTGKTTLSADPSRTLIGDDEHGWGPHGIFNFEGGCYAKTIKLSAEAEPEIFATTQRFGTVLENVVLDADGVPDFNDGRLTENTRCAYPLDFIPNASKTGRASHPKNIIMLTADAFGVMPPIARLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRELIASHGADCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLKTGEFRTDANFGFEVPVAVPGVDSAILDPRSTWADKPAYDRQAARLVGMFAVNFEKFEPHVDATVMGAAPRMQEAAE
What is the function of this protein?
Involved in the gluconeogenesis.  Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
What are the official names of this protein?
Phosphoenolpyruvate carboxykinase (ATP), PCK, PEP carboxykinase, PEPCK.
What is the protein family that this protein belongs to?
Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
What are the subcellular locations of this protein?
Cytoplasm.