PharMolix/UniProtQA huggingface dataset:
Protein: RECA_PSEAE
Sequence: MDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVSPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQGKANAAKYLEDNPEIGSVLEKTIRDQLLAKSGPVKADAEEVADAEAD
What is the function of this protein?
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.  It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
What are the official names of this protein?
Protein RecA, Recombinase A.
What is the protein family that this protein belongs to?
Belongs to the RecA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: USB1_XENLA
Sequence: MALVSYSSSEEDEGETSEPPGRRLPPLPPPTTVLRMFQDMEGDEDLDENTKHEGRIRSFKHERGNWATYVYIPFQPQEEFLDLLDELVSVAAENGVLLTKMSEFHISQSQTVVLRHHWINPFVESLKDKLHCMYRFLCIAERIKVYTNQEKTRTFLGLEVSVGMEHLLEVVSEVDRSLQEFNLQTFYQEPSFHVSLAWCVGDKYEKLKGSCLLELQKVIDRFEDSDTLTRFNAEEIRCKAGNKTFCIPLL
What is the function of this protein?
3'-5' RNA exonuclease that trims the 3' end of oligo(U) and oligo(A) tracts of the pre-U6 small nuclear RNA (snRNA) molecule, leading to the formation of a mature U6 snRNA 3' end-terminated with a 2',3'-cyclic phosphate.  Participates in the U6 snRNA 3' end processing that prevents U6 snRNA degradation.  In addition also removes uridines from the 3' end of U6atac snRNA and possibly the vault RNA VTRNA1-1.
What are the official names of this protein?
U6 snRNA phosphodiesterase 1, 3'-5' RNA exonuclease USB1.
What is the protein family that this protein belongs to?
Belongs to the 2H phosphoesterase superfamily. USB1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RS17_BURM9
Sequence: MNDSVKTSLKRTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEANTYNEGDLVEIQETRPVSKTKAWAVSRLVEAARVI
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: H2_VARV
Sequence: MDKTTLSVNACNLEYVREKAIVGVQAAKTSTLIFFVIILAISALLLWFQTSDNPVFNELTRYMRIKNTVNDWKSLTDSKTKLESDRGRLLAAGKDDIFEFKCVDFGAYFIAMRLDKKTYLPQAIRRGTGDAWMVKKAAKVDPSAQQFCQYLIKHKSNNVITCGNEMLNELGYSGYFMSPHWCSDLSNME
What is the function of this protein?
Envelope protein part of the entry-fusion complex responsible for the virus membrane fusion with host cell membrane during virus entry.  Also plays a role in cell-cell fusion (syncytium formation) (By similarity).
What are the official names of this protein?
Late protein H2.
What is the protein family that this protein belongs to?
Belongs to the poxviridae H2 family.
What are the subcellular locations of this protein?
Virion membrane; Single-pass type III membrane protein. Note=Component of the mature virion (MV) membrane. The mature virion is located in the cytoplasm of infected cells and is probably released by cell lysis.
Protein: LYSC2_HORSE
Sequence: KVFERXELARTLKRLGLDGFRGVSLPNXVXLAR
What is the function of this protein?
Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.
What are the official names of this protein?
Lysozyme C, spleen isozyme, 1,4-beta-N-acetylmuramidase C.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 22 family.
Protein: Y621_HALH5
Sequence: MVSFFMEHALTMILIILIINVVYVTLFTVRMIFTLKNQRYLAATVSMIEIIVYVLGLSLVLDNLDRIENLIAYAVGYGIGVITGMKVEEKLALGYITVNVITKEYEPDIPNTLRDKGYGVTNWVAYGREGERLMMEILTSRKSEADLYATIKKLDPKAFIISHEPKTFFGGFWVKGIRR
What are the official names of this protein?
UPF0316 protein BH0621.
What is the protein family that this protein belongs to?
Belongs to the UPF0316 family.
Protein: NADM_SACS2
Sequence: MSRGLYPGRFQPFHLGHLNVIKWSLERVDELIILVGSSQESHTVTNPFTAGERVEMIRNSLKDVGMDLSRIYIIPMPDILMNNIWAHYVSTYTPKFEVVFARNPLVVRIFKEAGYKVEIPPAFNREKYNSTYIRRLIILNDNWSELVPKPVYKYILEIKGDQRLREIVGTDK
What are the official names of this protein?
Nicotinamide-nucleotide adenylyltransferase, NAD(+) diphosphorylase, NAD(+) pyrophosphorylase, NMN adenylyltransferase.
What is the protein family that this protein belongs to?
Belongs to the archaeal NMN adenylyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LYSZ_METS5
Sequence: MIVVKIGGRVVKNALQNVIESVLRYPGKLILVHGGGDIVSEYTKRMGMEPTFVTSPEGIRSRYTSKEELDIYVMTMGLINKNIVTQLISKGKTAIGITGVDGGSVIGTRKKRIMILDERGKKRIIDGGYTGKIVSVNSQLISSLTSLVDVIVISPIALDTEESTPLNVDGDQMAFNVARAVKAEALLLLSDVDGVLLNNAVVKKLSKEEAKELATKIGPGMNRKVLMAAESVESGVSKVIIGSGLVPDAINSALAGRGTEIS
What is the function of this protein?
Involved in both the arginine and lysine biosynthetic pathways.  Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis).
What are the official names of this protein?
[LysW]-aminoadipate/[LysW]-glutamate kinase.
What is the protein family that this protein belongs to?
Belongs to the acetylglutamate kinase family. LysZ subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UF03_MOUSE
Sequence: HEEAELD
What are the official names of this protein?
Unknown protein from 2D-PAGE of fibroblasts, P36.
Protein: S61G2_DROME
Sequence: MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFCIMGFIGFFVKLIHIPINNIIVGS
What is the function of this protein?
Necessary for protein translocation in the endoplasmic reticulum.
What are the official names of this protein?
Protein transport protein Sec61 gamma-2 subunit.
What is the protein family that this protein belongs to?
Belongs to the SecE/SEC61-gamma family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Single-pass membrane protein.
Protein: CLPP_YERPS
Sequence: MSYSGERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD
What is the function of this protein?
Cleaves peptides in various proteins in a process that requires ATP hydrolysis.  Has a chymotrypsin-like activity.  Plays a major role in the degradation of misfolded proteins.
What are the official names of this protein?
ATP-dependent Clp protease proteolytic subunit, Endopeptidase Clp.
What is the protein family that this protein belongs to?
Belongs to the peptidase S14 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RRG8_YEAST
Sequence: MGLPKSAYKKLLIDCPTRVINKNCAQRVKDVSPLITNFEKWSDKRKKLYFKDEEEMVGQFHLENFNLKNNLYGRLLASPMRAEKISKLKSCRELLIPLKVVPSTGKDQHADKDKLKLVPTLDYSKSYKSSYVLNSASIVQDNLAAATSWFPISVLQTSTPKSLEVDSSTFITEYNANLHAFIKARLSVIPNVGPSSINRVLLICDKRKTPPIEIQVVSHGKGLPITQSVFNLGYLHEPTLEAIVSKDAVTNGIYLDADNDKDLIKHLYSTLLFHSVN
What is the function of this protein?
Required for respiratory activity and maintenance and expression of the mitochondrial genome.
What are the official names of this protein?
Required for respiratory growth protein 8, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the RRG8 family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: EX7S_LEGPA
Sequence: MSKGIHFEQSITELEEIVRQLEKGELTLEESLKQFEKGISLARRCQNALNQAEQKIETLTGTDSNIELDSDEQTSD
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TNAA_CALS4
Sequence: MYDDLTRMAEPYKIKMVEPLKITTREERIRLIKEAGYNLFLLKSDDVYIDLLTDSGTAAMSDYQWAGMMLGDESYAGSRNYQHLCEVVQDIFGYKYVVPTHQGRGAEKVLFPLLIKKGQYVLGNMHFDTTKAHIELAGGIGIDMVIKEAEDTENYHPFKGNFDVEALENFIKEKGAENIAFILATVTCNSAGGQPVSMENIKEVRRIADKYGIRLFFDAARFAENAYFIKQREKGYENKSIKEIVREMFSYGDGFTMSAKKDALVNIGGLIAIKEDEELFTRVKTMLIPMEGFVTYGGLAGRDMEAMARGLEEVLDENYLAWRINQVKYLGDKLREAGIPIQYPTGGHAVFIDGKKFLPHVPQEQFPSHAICVELYIEAGIRAVEVGALLAGRDPETGQNRLPKLDFVRLTIPRRVYTNSHMDVVAEAVKRVYARRDQIKGYRFVYEPPILRHFTARLEPVE
What are the official names of this protein?
Tryptophanase, L-tryptophan indole-lyase, TNase.
What is the protein family that this protein belongs to?
Belongs to the beta-eliminating lyase family.
Protein: NCAP_RABVP
Sequence: MDADKIVFKVNNQVVSLKPEIIVDQYEYKYPAIKDLKKPCITLGKAPDLNKAYKSVLSCMSAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIVIARKGDKITPGSLVEIKRTDVEGNWALTGGMELTRDPTVPEHASLVGLLLSLYRLSKISGQSTGNYKTNIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYSAIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGETRSPEAVYTRIIMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSSDS
What is the function of this protein?
Encapsidates the genome in a ratio of one protein N per nine ribonucleotides, protecting it from nucleases.  If expressed without protein P it binds non-specifically RNA and therefore can bind it's own mRNA.  Interaction with protein P abolishes any non-specific RNA binding, and prevents phosphorylation.  The soluble N-P complex encapsidates specifically the genomic RNA, with protein N protecting the genome like a pearl necklace.  The encapsidated genomic RNA is termed the nucleocapsid (NC) and serves as template for viral transcription and replication.  Protein N binds protein P in the NC through a different interaction, and can be phosphorylated.  Subsequent viral replication is dependent on intracellular concentration of newly synthesized protein N.  During replication, encapsidation by protein N is coupled to RNA synthesis and all replicative products are resistant to nucleases (By similarity).
What are the official names of this protein?
Nucleoprotein, NP, Nucleocapsid protein, Protein N.
What is the protein family that this protein belongs to?
Belongs to the lyssavirus nucleocapsid protein family.
What are the subcellular locations of this protein?
Virion. Host cytoplasm.
Protein: FPG_STRPQ
Sequence: MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQIIQSVGRRGKYLLIDLGQLVLVSHLRMEGKYLLFPDEVPDNKHFHVFFELKNGSTLVYQDVRKFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAALLSSQKPIKPHLLDQTLVAGLGNIYVDEVLWAAKVHPETASSRLNKAEIKRLHDETIRILALGIEKGGSTVRTYRNALGADGTMQDYLQVYGQTGKSCPRCGQAIVKLKVGGRGTHICPKCQKKRP
What is the function of this protein?
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents.  Acts as DNA glycosylase that recognizes and removes damaged bases.  Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG).  Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand.  Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
What are the official names of this protein?
Formamidopyrimidine-DNA glycosylase, Fapy-DNA glycosylase, DNA-(apurinic or apyrimidinic site) lyase mutM, AP lyase mutM.
What is the protein family that this protein belongs to?
Belongs to the FPG family.
Protein: CAPSD_DHBV1
Sequence: MDINASRALANVYDLPDDFFPKIDDLVRDAKDALEPYWKSDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTTPVPPGYLIQHEEAEEIPLGDLFKHQEERIVSFQPDYPITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEAQVTNYISRLRTWLSTPEKYRGRDAPTIEAITRPIQVAQGGRKTTTGTRKPRGLEPRRRKVKTTVVYGRRRSKSRERRAPTPQRAGSPLPRSSSSHHRSPSPRK
What is the function of this protein?
Self assembles to form an icosahedral capsid.  Most capsid appear to be large particles with an icosahedral symmetry of T=4 and consist of 240 copies of capsid protein, though a fraction forms smaller T=3 particles consisting of 180 capsid proteins.  Entering capsid are transported along microtubules to the nucleus.  Phosphorylation of the capsid is thought to induce exposure of nuclear localization signal in the C-terminal portion of the capsid protein that allows binding to the nuclear pore complex via the importin (karyopherin-) alpha and beta.  Capsids are imported in intact form through the nuclear pore into the nuclear basket, where it probably binds NUP153.  Only capsids that contain the mature viral genome can release the viral DNA and capsid protein into the nucleoplasm.  Immature capsids get stucked in the basket.  Capsids encapsulate the pre-genomic RNA and the P protein.  Pre-genomic RNA is reverse transcribed into DNA while the capsid is still in the cytoplasm.  The capsid can then either be directed to the nucleus, providing more genome for transcription, or bud through the endoplasmic reticulum to provide new virions (By similarity).
What are the official names of this protein?
Capsid protein, Core antigen, Core protein, HBcAg.
What is the protein family that this protein belongs to?
Belongs to the avihepadnavirus core antigen family.
What are the subcellular locations of this protein?
[Capsid protein]: Virion. Host cytoplasm.
Protein: SYDND_CHESB
Sequence: MHRYRSHTCEELRPSDVGGTVRLSGWVHRVRDHGGLLFIDLRDHYGITQIVADPDSPSFSTAEKLRSEWVIRVDGEVKARTPETVNPNLATGGVEVFAREIEVLSQAKELPLPVFGEPDYPEDIRLKYRFLDLRRETLHRNILARTKIIAEMRKRMAESGFTEFSTPILTASSPEGARDFLVPSRLHQGKFYALPQAPQIYKQLIMVSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQEDVFSTMEPVMRGIFEAFAEGKPVTQKLPRIPYDEAMRKYGSDKPDLRNPIVMEEVSEHFRGSGFKVFANILANDPKAEVWAIPAKTGGSRAFCDRMNSWAQGEGQPGLGYIFWRKEGDTLEGAGPIAKNIGPERTDAIRTQLGLGDGDACFFVAGDPKKFVAFAGAARTRAGEELNLVDRDRFELAWIVDFPFYEWNEDEKRIEFGHNPFSMPQGGMEALENQEPLSIKAFQYDLVCNGFEIASGGIRNHMPELMVKAFEVAGFDRQMVEERFGGLYRAFQYGAPPHGGMAAGIDRIVMLLRGAKNLREITMFPMNQQAMDLLMGAPSEATPQQLRELHIRLAPKQD
What is the function of this protein?
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn).  Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
What are the official names of this protein?
Aspartate--tRNA(Asp/Asn) ligase, Aspartyl-tRNA synthetase, AspRS, Non-discriminating aspartyl-tRNA synthetase, ND-AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EURM3_EURMA
Sequence: MVICNAIIVLLLAFNTLANPILPSSPNATIVGGQKAKAGECPYQISLQSSSHFCGGTILDEYWILTAAHCVNGQTASKLSIRYNSLKHASGGEKLSVAQIYQHEKYDSWTIDNDIALIKLQSPMTLDQKNAKSVQLPSQGSDVKVGDKVRVSGWGYLKEGSYSLPSDMYRVDIDIVAREQCNKLYEEAGATITDNMICGGNVADGGVDSCQGDSGGPVVDVASNQIVGIVSWGYGCARKGYPGVYTRVGSFIDWIDSKRSQ
What are the official names of this protein?
Mite allergen Eur m 3.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1 family.
What are the subcellular locations of this protein?
Secreted.
Protein: CX5B2_ONCMY
Sequence: AVGGIPTDEEQATGLEEIVMVAAQXGADXYDVM
What is the function of this protein?
Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water.  Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)).  The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
What are the official names of this protein?
Cytochrome c oxidase subunit 5B liver, mitochondrial, Cytochrome c oxidase polypeptide Vb liver.
What is the protein family that this protein belongs to?
Belongs to the cytochrome c oxidase subunit 5B family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: MHPB1_DECAR
Sequence: MTIQLKCLSHTPLRGINDPGAATVAEVDAVLAKAKAEVEAFDPELIVVFAPDHYNGLFYDLMPPFVIATAADSVGDYQTMTGPLSVDKDLALEMAKFILDSDIDIAISHRLQVDHGCTQTLEEMTGSLTRYPVIPIIINSVAPPFGPYRRVRKLGEAVGKFIAKLNKRVLILGTGGLSHEPPVPLLSGANEDIANFLIAGRNPTPEFRAARQARTLATGMIFGKPECELTPLNPEWDQNFMDLLIRGQLDKVDAFDIEEISKAAGRSTHEVRTWVAAFAAMAASGPYNAHQDYYRPINEWIAGYGVVSASQK
What is the function of this protein?
Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6-ketononatrienedioate, respectively.
What are the official names of this protein?
2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase 1, 3-carboxyethylcatechol 2,3-dioxygenase 1.
What is the protein family that this protein belongs to?
Belongs to the LigB/MhpB extradiol dioxygenase family.
Protein: CVC2_PSHV1
Sequence: MFGRGLPPLKFGQIGGDGWSTVLADPGNRLIVANAHRSEPRLRVETLIREELLTSRARIEDLERRNRAAHAALDRLAGKAVAIPLRAAAELKNVERPLEAAVELLEDMAERAHHEHEPAVVEDERCRKLSAGDQSGQDAGDDDDAGVIRILKNGSVIPLWKPRTGAKDFHVNFVTMAFAASGDGRVGFGSWYRALQSQLLDSSRGMERILGVSQDGRVSSRLVRAVIRVLRSAAEIYVGHRNYSAFEAAVMCLFQYDAAKRELADAKDGRGSSSGNEPRPASTFEEAIKLVPHYLRALQEDVRREWGAVSYAFDRTKLPQKFFSPVDAKKYSNGALSPHIVYRLFKARGVFAATGREVTKEEIATVDPDFSRFDDPIANLSLAFFPARRSPLSLHEDEPLMRAAIDAVALMMLLQRLMYNSDVYANSMANRFQAAAFFEGRVTGPVAPASGDVYGDRLSGDGDPIRAPGSRPPAAAEATLSGDGSRDVVSLDNNLVFLFDKYLCPMYRYDNRTEMTGFFPGLAAVCLVGKVRGVPSPSSAGDCCSSLINLVDLDLRKTENTGAGAAVVLTVHDAITYDMETGLSRLLSVFDVKKHMKPVLRAMNVETDSDLIYFLCLGCLPHHVTIA
What is the function of this protein?
Capsid vertex-specific component that plays a role during viral DNA encapsidation, assuring correct genome cleavage and presumably stabilizing capsids that contain full-length viral genomes.  Participates in the interaction between the capsid and the tegument through interaction with the large tegument protein/LTP.
What are the official names of this protein?
Capsid vertex component 2.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae CVC2 protein family.
What are the subcellular locations of this protein?
Virion. Host nucleus.
Protein: DCUP_PHOLL
Sequence: MNALKNDRYLRALLRQSVDVTPVWMMRQAGRYLPEYQATRAKAGDFIALCKNTELACEVTLQPLQRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKSPVFSRADVEKLPVPDPEMELSYVTDAVRAIRKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPTVMHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLIRENEGRRVPVTLFAKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYASPERIEQEVSTILQGFGTGSGHVFNLGHGIHQDILPEHAGVFVEAVHKLSAKYHQ
What is the function of this protein?
Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
What are the official names of this protein?
Uroporphyrinogen decarboxylase, UPD, URO-D.
What is the protein family that this protein belongs to?
Belongs to the uroporphyrinogen decarboxylase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ZER1_PONAB
Sequence: MASDTPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNAACNFEPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKSLQTLRSFSHTLVSLSLFGCTNIFYEEENPGGCEDEYLVNPTCQVLVKDFTFEGFSRLRFLNLGRMIDWVPVESLLRPLNSLAALDLSGIQTSDAAFLTQWKDSLVSLVLYNMDLSDDHIRVIVQLHKLRHLDISRDRLSSYYKFKLTREVLSLFVQKLGNLMSLDISGHMILENCSISKMEEEAGQTSIEPSKSSIIPFRALKRPLQFLGLFENSLCRLTHIPAYKVSGDKNEEQVLNAIEAYTEHRPEITSRAINLLFDIARIERCNQLLRALKLVITALKCHKYDRNIQVTGSAALFYLTNSEYRSEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFGIPEELEFQYRRVNELLLSILNPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKICDQVMEFSWSALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAEVKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGVCEPQREEVEERMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPLLIKEGGMPLLRDIIKMATARQETKEMARKVIEHCSNFKEENMDTSR
What is the function of this protein?
Serves as substrate adapter subunit in the E3 ubiquitin ligase complex ZYG11B-CUL2-Elongin BC.  Acts redudantly with ZYG11B to target substrates bearing N-terminal glycine degrons for proteasomal degradation.  Involved in the clearance of proteolytic fragments generated by caspase cleavage during apoptosis since N-terminal glycine degrons are strongly enriched at caspase cleavage sites.  Also important in the quality control of protein N-myristoylation in which N-terminal glycine degrons are conditionally exposed after a failure of N-myristoylation.
What are the official names of this protein?
Protein zer-1 homolog, Zyg-11 homolog B-like protein.
What is the protein family that this protein belongs to?
Belongs to the zyg-11 family.
Protein: DSBD_VIBVY
Sequence: MRALLTFFVAGLLVLSSPAMALFGNNQNSSFASGSNDFVPVDQAFPFNYFQQDHRITLDWQVKEGYYLYQQRLSFSAENVVLGDIQMENGQPYRDEFFGDVNIYTNPLFVNIPMQDWQPGAKLIVQYQGCAKAGFCYPPETRVIDIASFTNGDMAPATMPTQTASPLDTSTANTSTPQPLTQQDQLASGLADNWWTPLLFLALGVGLAFTPCVLPMYPILTSIVLGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVASAGLQFQAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGGSSTGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGVALYALAMGMGIPLILVAVFGNKLLPKAGGWMDHVKTLFGFVLLAAPIFLLERILPEMWSTALWSALGIAAFGWLYHVKNSLEFGGWKQSAVGIIAVLGLFASAQPALNYWFADSSQQAQTSEVSFIKIRNVEELQQQLALAKQAKKPVMLDFYADWCVACKEFEKYTFHDPAVAAQLKQFVLLQADVTRNQAQDIELLQAQQVLGLPTIDFWDAQGNPVSNARLTGFMQAAPFLEHIQRISN
What is the function of this protein?
Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes.  Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm.  This transfer involves a cascade of disulfide bond formation and reduction steps.
What are the official names of this protein?
Thiol:disulfide interchange protein DsbD, Protein-disulfide reductase, Disulfide reductase.
What is the protein family that this protein belongs to?
Belongs to the thioredoxin family. DsbD subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: SYV_YERPE
Sequence: MENTPSHINKTEPSLDKTYSPQEIEQPLYEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWEWKGESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPLADGAKTAEGKDYLVVATTRPETVLGDTGVAVNPEDPRYKDLIGKEVILPLVGRRIPILGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRSEAEVFDTHGEATDAFSNAIPAQFQGLERFAARKAVVAEFEKLGLLEEVKPHDLTVPYGDRGGVVIEPMLTDQWYVHTAPLAKVAIEAVENGEIQFVPKQYENMYYSWMRDIQDWCISRQLWWGHRIPAWYDEQGNVYVGRDEAEVRRDNNLGAEVALRQDEDVLDTWFSSGLWTFSTLGWPEQTDALKTFHPTSVVVSGFDIIFFWIARMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGQNGGEMVLSLADRWILAEFNQTIKAYREAMDTYRFDLAAGILYEFTWNQFCDWYLELTKPVMNSGSEAELRGTRHTLIQVLEALLRLAHPIIPYITETIWQRVKNLKGITADTIMLQPFPEYDASQVDEQALSDLEWIKQTIIAVRNIRAEMNIAPGKPLEVMLRGANAQAQRRVLENQSFIQSLARLSSLTLLAEGDKGPVSVTKLVEGAEVLIPMAGLIDKATELDRLAKEVAKLDAEIERIEGKLGNEGFVARAPEAVVAKERERLAACAEAKQKLIEQQATIAAL
What is the function of this protein?
Catalyzes the attachment of valine to tRNA(Val).  As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.
What are the official names of this protein?
Valine--tRNA ligase, Valyl-tRNA synthetase, ValRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.