PharMolix/UniProtQA huggingface dataset:
Protein: RPOZ_SALCH
Sequence: MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: PSBA_BIGNA
Sequence: MTAIIERRENSSLWARFCEWITSTENRLYIGWFGVLMVPTLLTATTVFIIGFIAAPPVDIDGIREPVSGSLLYGNNIISGAIVPTSNAIGLHFYPIWEAASVDEWLYNGGPYQMIVCHFFIGVCSYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRQTTENESTNNGYVFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTAMGISTMAFNLNGFNFNQSIIDSQGRVINSWADIINRANLGMEVMHERNAHNFPLDLA
What is the function of this protein?
Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
What are the official names of this protein?
Photosystem II protein D1, PSII D1 protein, Photosystem II Q(B) protein.
What is the protein family that this protein belongs to?
Belongs to the reaction center PufL/M/PsbA/D family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: NDUS6_ARATH
Sequence: MASNLLKALIRSQILPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISEVPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH
What is the function of this protein?
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.  Complex I functions in the transfer of electrons from NADH to the respiratory chain.  The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
What are the official names of this protein?
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the complex I NDUFS6 subunit family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: BETA_RHIE6
Sequence: MQADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNGSKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVGMVYGLARKIVIEDGRATGVEIERGGKVEVVKATREVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAEPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYRGPEIQPGEGVQSDEQIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKQPLARSNQEPWINPRAAVSDR
What is the function of this protein?
Involved in the biosynthesis of the osmoprotectant glycine betaine.  Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
What are the official names of this protein?
Oxygen-dependent choline dehydrogenase, CDH, CHD, Betaine aldehyde dehydrogenase, BADH.
What is the protein family that this protein belongs to?
Belongs to the GMC oxidoreductase family.
Protein: RSSA_LACBS
Sequence: MASKLPSVLAATEEEIQLLLAAQCHIGTKNCDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARVIAAVENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRVDHQAIREASYVNIPVIALCDTDAPLKFVDVAIPTNNKTRHSIGLIWWLLAREVLRLRGTIPRTSDGWNVMVDMFFYRDPEEVEKQQQEEAAAKLAAQQGVETEAPAGLSEWDVSSALDWAADPAPGTTTDWSAEPAAAAGGGWGADTGTAGWD
What is the function of this protein?
Required for the assembly and/or stability of the 40S ribosomal subunit.  Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
What are the official names of this protein?
40S ribosomal protein S0.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS2 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATPE_BACMK
Sequence: MKTFPVSIVTPDGPVYEKEVEMVSVKAESGEMGILPGHIPTVAPLKISAVRLKNGGHTDYVAVSGGFIEVRPDKVTVLSSSAEEANHIDIHRANESKRRAEQRMQDKQAHVDFRRAEMALQRAVNRLNVSDMK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
ATP synthase epsilon chain, ATP synthase F1 sector epsilon subunit, F-ATPase epsilon subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase epsilon chain family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: RL10_SULIL
Sequence: MKRLALALKQKKVASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKIAAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLNLEGYRSNIAEAYRNAFTLAVEIAYPVPDVLKFTINKIFKNAITLASEIGYLTPESAQAVISKAVAKAYALATAISGKVDLGVKLPSAQQTQTQQSTAEEKKEEKKEEEKKGPSEEEIGSGLASLFG
What is the function of this protein?
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L10, Acidic ribosomal protein P0 homolog.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL10 family.
Protein: EMBR_MYCTU
Sequence: MAGSATVEKRLDFGLLGPLQMTIDGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGGAGIDPRVVLAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQPLDAKKSAKTTAAGTVTVLDQRTMASGQQAVAYLHDIASGRGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRSAVTLNDGDHIRICDHEFTFQISAGTHGGT
What is the function of this protein?
Positively regulates the transcription of the embCAB operon.  Exhibits ATPase and GTPase activities.
What are the official names of this protein?
Transcriptional regulatory protein EmbR.
What is the protein family that this protein belongs to?
Belongs to the AfsR/DnrI/RedD regulatory family.
Protein: GLPK_ECOL5
Sequence: MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE
What is the function of this protein?
Key enzyme in the regulation of glycerol uptake and metabolism.  Catalyzes the phosphorylation of glycerol to yield sn-glycerol 3-phosphate.
What are the official names of this protein?
Glycerol kinase, ATP:glycerol 3-phosphotransferase, Glycerokinase, GK.
What is the protein family that this protein belongs to?
Belongs to the FGGY kinase family.
Protein: LUXS_VIBVU
Sequence: MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRKHLNGASVEIIDISPMGCRTGFYMSLIGAPSEQDVASAWTASMEDVLKVESQNKIPELNEYQCGTAAMHSLDEAKQIAQNILAAGISVNKNDELALPEAMLKELKVD
What is the function of this protein?
Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment.  The regulation of gene expression in response to changes in cell density is called quorum sensing.  Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).
What are the official names of this protein?
S-ribosylhomocysteine lyase, AI-2 synthesis protein, Autoinducer-2 production protein LuxS.
What is the protein family that this protein belongs to?
Belongs to the LuxS family.
Protein: ARGC_SHESM
Sequence: MKNIAIIGASGYTGAQLTALVHAESELSIQGLYVSENSLDKGRALADLYPVYSHIDLALSPLTEEAKAKIVAEADAVVLATEHSVSLHLAAWFYNQGLAVFDLSGAYRFSDVAQYPKWYGFEHEYPEVLAKAVYGLAEWNAKEVAATKMIAVPGCYPTASLTALKPLKNLLTSAYPVINAVSGVTGAGRKAQLHTSFCEVSLTPYGVLGHRHQPEIATQLGQEVIFTPHLGNFKRGILATITVQLKPGTTTADVAAAYSVYDQAPLVTVKQNQFPKVDDVVLTPNCHLGWKFDENSGYLVVASAIDNLMKGAASQALQCIKIHFNL
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
What are the official names of this protein?
N-acetyl-gamma-glutamyl-phosphate reductase, AGPR, N-acetyl-glutamate semialdehyde dehydrogenase, NAGSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TERM_ADE40
Sequence: MALSVQDCARLTGQSVPAMERFSPLRNIWNRVREYARAATTAAGITWLSRYVYHYHRLMLEDLAPGTPATLRWPLYREPPPHFLVGYQYLVRTCNDYVFESRAYSRLRYTEITQPGMQVVNWSVMANCTYTINTGSYHRFVDLDDFQNTLTQIQQAVLAERVVADLALLQPLRGFGSTRMADRGELEIPVESLMQDYYKDLRRCQNEAWGMADRLRIQQAGPKDVTLLATIRRLKTAYFNFLISSITSSAASLRIPHATVLSLPCDCDWLEAFLEKFSDPVQLDSLNEAWQSLPMQQMIRCTVSALSLPQGPHLLPPLSGSGMQGGVFELRPRENGRAVTETMRRRRGEMIQRFIDRLPVRRRRRRQPVPAPVSPEGPAVEEEEFMEIEETPAAFEQEVRETVAEAIRLLQEELTFAARNSQFFNFAVDFYEAMDRLEALGDINEMTLRRWVMYFFVCEHIATTLNYLFQRLRNYAVFARHVELNIAQVVMRARNTVGDVVYSRVWNENGLNAFSQLMRRISNDLAATVERAGHGELQDEEIDQFMSEIAYQDNSGDVQEILRQAAVNDADIDSVELSFRFRVRGPVVFSQRRHIQDLNRRVVAYASQLRAQHQPLPELHADVPLPPLQANPHPPLPPDARPQRTM
What is the function of this protein?
Protein covalently bound to the viral DNA that acts as a primer for viral genomic replication by DNA strand displacement.  Assembles on the viral origin of replication in an initiation complex with viral polymerase, DBP, host NFIA and host POU2F1/OCT1.  During initiation, the polymerase covalently couples the first dCTP with Ser-580 of pTP.  The terminal protein stimulates the template activity over 20 fold compared to protein-free templates.  Neo-synthesized viral genomes are linked to two preterminal proteins, one for each 5' end.  These new genomes are encapsidated in the nucleus, and during capsid maturation by viral protease, preterminal protein is first cleaved into intermediary (iTP), then into mature TP.  May play a role in host nuclear matrix localization of genomic DNA.
What are the official names of this protein?
Preterminal protein, pTP, Bellett protein, Precursor terminal protein.
What is the protein family that this protein belongs to?
Belongs to the adenoviridae terminal protein family.
What are the subcellular locations of this protein?
Host nucleus matrix.
Protein: ARP4_YARLI
Sequence: MTTTAPAPQVYGGDEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLARLNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTPRFEIKNKKAVEMGEPPVFTKRELPNVTHSFTDLQVSRILSEFKDSMCQVNDVPLTPEISGEAADRVFEFPTGYSTTFGADRLSTSESLFKPSEYPFDGETVPDTARGLSEMVVDTINASNVDVRAHLANNIVITGGGSLVQGLSDRVSKDVTQALSGLKVRVAAASNQEERRHGAWIGGSVLGSLGSFHQLWVSKQEWQEKGGDYLVEKKRFK
What is the function of this protein?
Chromatin interaction component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A.  The NuA4 complex is also involved in DNA repair.  Is required for NuA4 complex integrity.  Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling.  Component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair (By similarity).
What are the official names of this protein?
Actin-related protein 4, Actin-like protein ARP4, Actin-like protein 4.
What is the protein family that this protein belongs to?
Belongs to the actin family. ARP4 subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: SYH_BDEBA
Sequence: MSNKIQRVRGTRDLLPEDSILFRFVEESAYEKALLYGYGEIETPIFEFSDVFHRTLGETSDVVNKETYDFTDRGGESLTLRPEGTAGVARAFISEGMMQNLPLKFYYSGPMFRYERPQKGRYRQFYQLGAECLGYESPLADVETISLAWDLLKKIGISDDCTLEINTLGDAESRAAYRDTLVNYFTAHKDQLSEDSKMRLEKNPLRILDSKDEGDKKLNANAPKLEQSLNQTSQDFFKKVIAGIEKLGIPYKINDHLVRGLDYYCHTVFEFTTTKLGAQGTVLAGGRYDGLIETMGGPKTPGVGWAAGIDRLADLTPKELATKKEVIIAVVGADEQGEDESVKVAHEMRVRGFKTENFLSGKMGKKMQKANKLGAHYALILGGNEVTNKTVTVKNFTTGEQKEITRAELQTYPFSI
What are the official names of this protein?
Histidine--tRNA ligase, Histidyl-tRNA synthetase, HisRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLL3_CHICK
Sequence: MRIVYLLIPFFLLFLQGAAGTATQCRIRGGFCRVGSCRFPHIAIGKCATFISCCGRAYEVDALNSVRTSPWLLAPGNNPH
What is the function of this protein?
Has bactericidal activity.
What are the official names of this protein?
Gallinacin-3, Gal-3, Beta-defensin 3.
What is the protein family that this protein belongs to?
Belongs to the beta-defensin family.
What are the subcellular locations of this protein?
Secreted. Cytoplasmic granule.
Protein: PEPT_FUSNN
Sequence: MDSKKYSTLKERFLRYVKFNTRSDDASETIPSTPSQMEFAKMLKKELEELGLSNIFINKACFVNATLPSNIDKKVATVGFIAHMDTADFNAEGISPQIVENYDGKDIVLNKEQNIVLKVEEFPNLKNYISKTLITTDGTTLLGADDKSGIVEIIEAVKYLKEHPEIKHGDIKIAFGPDEEIGRGADYFDVKEFAADYAYTMDGGPIGELEYESFNAAQAKFKIKGVSVHPGTAKGKMINASLIASEIIEMFPKDEVPEKTEGYEGFYFLDEMKSNCEEGEVVYIIRDHDKAKFLAKKEFVKELVEKVNKKYGREVVKLELKDEYYNMGEIIKDHMYVVDIAKQAMENLGIKPLIKAIRGGTDGSKISFMGLPTPNIFAGGENFHGKYEFVALESMEKATDVIVEIVKLNAER
What is the function of this protein?
Cleaves the N-terminal amino acid of tripeptides.
What are the official names of this protein?
Peptidase T, Aminotripeptidase, Tripeptidase, Tripeptide aminopeptidase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M20B family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ACEA_SALTY
Sequence: MKTRTQQIEELQKEWTQPRWEGITRPYSAEEVVKLRGSVNPECTLAQLGAAKMWRLLHGEAKKGYINSLGALTGGQALQQAKAGIEAIYLSGWQVAADANLASSMYPDQSLYPANSVPAVVDRINNTFRRADQIQWASGIEPNDPRYVDYFLPIVADAEAGFGGVLNAFELMKSMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVMGVPTLVIARTDADAADLITSDCDPYDSGFITGERTSEGFYRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFADAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKYQFITLAGIHSMWFNMFDLAHAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGASSVTALTGSTEEAQF
What is the function of this protein?
Involved in the metabolic adaptation in response to environmental changes.  Catalyzes the reversible formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle during growth on fatty acid substrates.
What are the official names of this protein?
Isocitrate lyase, ICL, Isocitrase, Isocitratase.
What is the protein family that this protein belongs to?
Belongs to the isocitrate lyase/PEP mutase superfamily. Isocitrate lyase family.
Protein: FER_PEPAS
Sequence: AYVINDSCIACGACKPECPVNIQQGSIYAIDADSCIDCGSCASVCPVGAPNPED
What is the function of this protein?
Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
What are the official names of this protein?
Ferredoxin.
Protein: RL19E_KORCO
Sequence: MDLEYQKKLAAKVAGVGLDRVRINPEKIDLVSEAVTRADIRRLIRSGAIEILQKRGISGARKKPRRKGPGSRKGGKYSKLPRKRRWIRKIRALRRELRRMKEQGLIDSKEYRELYAKLSSFNSVSQLRAHVGR
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L19e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL19 family.
Protein: RL13_ECO5E
Sequence: MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
What is the function of this protein?
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself.  It is important during the early stages of 50S assembly.
What are the official names of this protein?
50S ribosomal protein L13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL13 family.
Protein: DNAA_MYCPN
Sequence: MEQFSAFKLLLKKQYETTLGFYDKYIKNLKRFALKNNVLFVIVDNEFARETLNSNPDIVGLASKLYDDIRAVRFVNEQDFFINLAKLEEDNRETLYQSSGLSKNFTFKNFVVGDGNRRVYEAGVRISETQDADFSPLFIYGETGLGKTHLLQAIGNDKFFHFPNAKVKYVVSSDFAQEVVNAFYQKEKDQGIEKLKAAYESLDLLLIDDTQIFGKKEKTLEILFSIFNNLVSKGKQIVFVSDKTPDELANIDPRMVSRFKSGLLLKIEKHNLSSLCEILAVKLKEKDPNIQITNEAREKAAQISGNDVRSLNGIATKLLFYVKTTKQNLINNDNLKEILFEEFEKFHKKSFDPYLLIENVCRRFNVPVDSVLSENRKAELVRVRDVCNYILREKYKMQFQQIGKIFKRNHSTVVAAVKRVAKMIEKDDSLQDIITSLVI
What is the function of this protein?
Plays an important role in the initiation and regulation of chromosomal replication.  Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'.  DnaA binds to ATP and to acidic phospholipids (By similarity).
What are the official names of this protein?
Chromosomal replication initiator protein DnaA.
What is the protein family that this protein belongs to?
Belongs to the DnaA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: US31_HCMVM
Sequence: MSLLEREESWRRVVDYSHNLWCTCGNWQSHVEIQDEEPNCEQPEPAHWLEYVAVQWQARVRDSHDRWCLCNAWRDHALRGRWGTAYSSGSSASSSGFVAESKFTWWKRLRHSTRRWLFRRRRARYTPSNCGESSTSSGQSSGDESNCSLRTHGVYTRGEQH
What are the official names of this protein?
Uncharacterized protein US31.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae US1 family.
Protein: RET4_BOVIN
Sequence: ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSCRLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYCDGKSERNIL
What is the function of this protein?
Retinol-binding protein that mediates retinol transport in blood plasma.  Delivers retinol from the liver stores to the peripheral tissues.  Transfers the bound all-trans retinol to STRA6, that then facilitates retinol transport across the cell membrane.
What are the official names of this protein?
Retinol-binding protein 4, Plasma retinol-binding protein, PRBP, RBP.
What is the protein family that this protein belongs to?
Belongs to the calycin superfamily. Lipocalin family.
What are the subcellular locations of this protein?
Secreted.
Protein: ZN205_BOVIN
Sequence: MSADDGGIRAAQDKERARETPGHGHSCQEMLSESEGTVPLGEAWESPHIKMEPEEPHPEGVSQETRAEGARGWVPLSQGTKEKVCFLPGGALPAPQTPVLSREGRTRDRQMAAALLTAWSQMPVTFEDMALYLSREEWGRLDHTQQSFYREVLQKRSGLSLGFPFSRPFWASQVQGKGEAPGSSRQLGHEEEEKRGVVEVDKEELAASLGALGDAKSFKSRMGRAQGEAPRCGQRAASGQNSGPAKDDVQPCPVKEAQLESAPPDTDLPKTQEGHFPEQPREGGTAAPESSEEGLALDSEAGKKTYKCEQCGKAFSWHSHLVTHRRTHTGEKPYACTDCGKRFGRSSHLIQHQIIHTGEKPYTCPSCWKSFSHHSTLIQHQRIHTGEKPYVCDRCAKRFTRRSDLVTHQGTHTGAKPHKCPICGKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAHNRTHTGEKPYHCLDCGKSFSHSSHLTAHQRTHRGVRPYSCPLCGKSFSRRSNLHRHEKIHTAGPKALAMLMLGAAGTLAAPPPAPT
What is the function of this protein?
May be involved in transcriptional regulation.
What are the official names of this protein?
Zinc finger protein 205.
What is the protein family that this protein belongs to?
Belongs to the krueppel C2H2-type zinc-finger protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: ARGB_BIFLS
Sequence: MHTDLRADQKAEVLIEALPWLEEFAGQRIVVKYGGNAMVDDHLKQCFAEDMVFLRQVGLHPIVVHGGGPQISHMLKALGIKSEFKGGLRVTTPEAMDVVRMVLTGKVSRELVGLINAHGPLAVGLSGEDGGLFSAMQRRPIIDGKPTDIGLVGDVVSVDASAVEDLVAAGRIPVVSSVAPNEEDATEVLNVNADSAAAALAAAVGARKLVILTDVDGLYADWPDKNSLIGRIGVENLRDMLPDLESGMRPKMEACVRAIDGGVPQAHIIDGRKPHSILNEIFTSAGIGTMVMPDEGLEMRSSYGY
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.
What are the official names of this protein?
Acetylglutamate kinase, N-acetyl-L-glutamate 5-phosphotransferase, NAG kinase, NAGK.
What is the protein family that this protein belongs to?
Belongs to the acetylglutamate kinase family. ArgB subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KDSB_XANC5
Sequence: MTPTTPADFVVAIPARYASTRLPGKPLQRIGDRPMIQHVTERALLAGAREVWVATDDARIAAAIEHLPGVHVAMTGAAHLSGTDRLAECARIAGWDDQTCVVNLQGDEPFAPAAGIRAVADLLQHSGAQMATLAAPVDNAHDLFDPNVVKLVRTAGGDALYFSRAPIPWHRDSFASQRDSVPAEGQWLRHIGIYAYRAGFLQRFAAMPPGMLERIESLEQLRVMEAGYRIAVAVTPEPFPPGIDTPDDLVRAQVRVASP
What is the function of this protein?
Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
What are the official names of this protein?
3-deoxy-manno-octulosonate cytidylyltransferase, CMP-2-keto-3-deoxyoctulosonic acid synthase, CKS, CMP-KDO synthase.
What is the protein family that this protein belongs to?
Belongs to the KdsB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DNAK_XYLF2
Sequence: MGKIIGIDLGTTNSCLAIIEGGKGRVIENSEGDRTTPSIVAYTKDGEVLVGAAAKRQAVTNPKNTFYAVKRLIGRKFGDAEVQKDLDLVPYKITQHDNGDAWVATADGKKLAPQEISAKVLEKMKKTAEDFLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKGGDRKIAVYDLGGGTFDVSIIEIAEVDGEKQFEVLATNGDTFLGGEDFDKRVIDYLVDEFNKDQGIDLRKDPLALQRLKDAAERAKIELSSSQQTEVNLPYITADASGPKHLNIKLTRAKLEALVDDLVRKSIEPCRIALNDAGLRTSDVQEVILVGGQTRMPKVQQAVADFFGKEPRKDVNPDEAVALGAAIQGGVLAGDVKDVLLLDVTPLSLGIETMGGVFTKIIEKNTTIPTKASQVFSTAEDGQSAVTVHVLQGEREQARFNKSLAKFDLAGIEPAPRGQPQIEVSFDIDANGILHVSAKDKKTNKEQKVEVKAGSGLSDSEIQQMVADAEAHREEDKKFQELVQARNHADGLIHSTRSAIKEHGSKVGGELIGRVEASLAELEAAVKGDDKNQIEAKSKTLEEVAQSLHMAATAEQQSGSTGAGAGASAKVDDVVDAEFTEVKADKK
What is the function of this protein?
Acts as a chaperone.
What are the official names of this protein?
Chaperone protein DnaK, HSP70, Heat shock 70 kDa protein, Heat shock protein 70.
What is the protein family that this protein belongs to?
Belongs to the heat shock protein 70 family.
Protein: LIVJ_ECOL6
Sequence: MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK
What is the function of this protein?
This protein is a component of the leucine, isoleucine, valine, (threonine) transport system, which is one of the two periplasmic binding protein-dependent transport systems of the high-affinity transport of the branched-chain amino acids.
What are the official names of this protein?
Leu/Ile/Val-binding protein, LIV-BP.
What is the protein family that this protein belongs to?
Belongs to the leucine-binding protein family.
What are the subcellular locations of this protein?
Periplasm.
Protein: ISPF_CALBD
Sequence: MFKVGIGYDVHRFVEGRKLILGGVEIPFEKGLLGHSDADVLVHAIIDAILGAMGENDIGRLFPDSSPNYKDISSLVLLKEVAKLLEEKNMKIVNIDSTVVSQRPKISPYTNEMKNKIADCLKIESTQVNIKGKTTEGLGFEGREEGISAYAVVLICE
What is the function of this protein?
Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds.  Catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
What are the official names of this protein?
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, MECDP-synthase, MECPP-synthase, MECPS.
What is the protein family that this protein belongs to?
Belongs to the IspF family.