PharMolix/UniProtQA huggingface dataset:
Protein: OAF_XENLA
Sequence: MFPLDNSRRFLWLLVLLFGCFLPCLADLKVLVRLEDGQLTEENLQADSDKDFITLEFRKTDGTFVTYLADFKQDVKIFHVLILGELERGQSQFQALCFVTRLQSNEIIPSESMAKLRQKNPHAVRQAEEMRGTDTLQMDVAINFTKGVQLTPHIHNICAEAKEAIYTRQEDVRLWLERGIDGSMFEVLPQPSSIPSLHPCKLCPQDWKPCICSYHLSLEWIPCSLKYCKNRDSSVKTTSYRCGIRSCQKAFTFHFYVAQKQLCLWDEET
What are the official names of this protein?
Out at first protein homolog.
What is the protein family that this protein belongs to?
Belongs to the OAF family.
Protein: RS18_ECOL5
Sequence: MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ
What is the function of this protein?
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S18.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS18 family.
Protein: AKA10_HUMAN
Sequence: MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNHALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKSSLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQSSLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVNTFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFLRSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLAAKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPLRQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGSSDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRESEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKSTKL
What is the function of this protein?
Differentially targeted protein that binds to type I and II regulatory subunits of protein kinase A and anchors them to the mitochondria or the plasma membrane.  Although the physiological relevance between PKA and AKAPS with mitochondria is not fully understood, one idea is that BAD, a proapoptotic member, is phosphorylated and inactivated by mitochondria-anchored PKA.  It cannot be excluded too that it may facilitate PKA as well as G protein signal transduction, by acting as an adapter for assembling multiprotein complexes.  With its RGS domain, it could lead to the interaction to G-alpha proteins, providing a link between the signaling machinery and the downstream kinase (By similarity).
What are the official names of this protein?
A-kinase anchor protein 10, mitochondrial, AKAP-10, Dual specificity A kinase-anchoring protein 2, D-AKAP-2, Protein kinase A-anchoring protein 10, PRKA10.
What are the subcellular locations of this protein?
Mitochondrion. Membrane. Cytoplasm. Note=Predominantly mitochondrial but also membrane associated and cytoplasmic.
Protein: YIDC_BURM9
Sequence: MDIKRTVLWVIFFMSAVMLFDNWQRSHGRPSMFFPNVTQTNTASNATNGNGASGASAAAAANALPAAATGAAPATTAPAAQAQLVRFSTDVYNGEIDTRGGTLAKLTLTKAGDGKQPDLSVTLFDHTANHTYLARTGLLGGDFPNHNDVYAQVAGPTSLAADQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIENVGAAPVTPSVYMELVRDNSSVETPMFSHTFLGPAVYTDQKHFQKITFGDIDKNKADYVTSADNGWIAMVQHYFASAWIPQSGAKRDIYVEKIDPTLYRVGVKQPVEAIAPGQSADVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGFVGNWGWAIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPYFILPVLMAVSMFVQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRTLGGAAAKKKAS
What is the function of this protein?
Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane.  Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins.  Aids folding of multispanning membrane proteins.
What are the official names of this protein?
Membrane protein insertase YidC, Foldase YidC, Membrane integrase YidC, Membrane protein YidC.
What is the protein family that this protein belongs to?
Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: PGSA_YERPN
Sequence: MQLNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRFGAFLDPVADKVMVAVALVLVAEHYHSWWITLPAATMIAREIIISSLREWMAEIGKRSSVAVSWVGKVKTMAQMGSLVGLLWRPDHNVELASFVLLYIAAVLTFWSMFQYLNAAWSDLLEP
What is the function of this protein?
This protein catalyzes the committed step to the synthesis of the acidic phospholipids.
What are the official names of this protein?
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, Phosphatidylglycerophosphate synthase, PGP synthase.
What is the protein family that this protein belongs to?
Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: MUTS_SALSV
Sequence: MNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNLSERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
What is the function of this protein?
This protein is involved in the repair of mismatches in DNA.  It is possible that it carries out the mismatch recognition step.  This protein has a weak ATPase activity.
What are the official names of this protein?
DNA mismatch repair protein MutS.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutS family.
Protein: PR3B1_RAT
Sequence: MQLSLTQPCFSGTLLMLAVSTLLLWEQVTSAPNYRMSTGSLYQRVVELSHYTHDLASKVFIEFDMKFGRTVWTHNLMLSPCHTAAIPTPENSEQVHQAKSEDLLKVSITILQAWQEPLKHIVAAVATLPDGSDTLLSRTKELEERIQGLLEGLETILSRVQPGAVGSDYTFWSEWSDLQSSDKSTKNGVLSVLYRCMRRDTHKVDNFLKVLKCRDIYNNNC
What are the official names of this protein?
Prolactin-3B1, Chorionic somatomammotropin hormone 2, Placental lactogen II, PL-II, RPLII.
What is the protein family that this protein belongs to?
Belongs to the somatotropin/prolactin family.
What are the subcellular locations of this protein?
Secreted.
Protein: 2ABD_DANRE
Sequence: MAGVGGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGELLATGDKGGRVVIFQREQESKNRPLSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHINSISVNSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCNVFVYSSSKGTIRLCDMRAAALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTGSYNNFFRMFDRNTRRDITLEASRESSKPRAMLKPRKVCTGGKRKKDEISVDSLDFNKKILHTAWHPKENVIAVAATNNLYIFQDKMN
What is the function of this protein?
B regulatory subunit of protein phosphatase 2A (PP2A) that plays a key role in cell cycle by controlling mitosis entry and exit.  The activity of PP2A complexes containing PPP2R2D (PR55-delta) fluctuate during the cell cycle: the activity is high in interphase and low in mitosis.  During mitosis, activity of PP2A is inhibited via interaction with phosphorylated ENSA and ARPP19 inhibitors.  Within the PP2A complexes, the B regulatory subunits modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity).
What are the official names of this protein?
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform, PP2A subunit B isoform B55-delta, PP2A subunit B isoform PR55-delta, PP2A subunit B isoform R2-delta, PP2A subunit B isoform delta.
What is the protein family that this protein belongs to?
Belongs to the phosphatase 2A regulatory subunit B family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PSBN_ARAHI
Sequence: METATLVAIFISGLLVSFTGYALYTAFGQPSQQLRDPFEEHGD
What is the function of this protein?
May play a role in photosystem I and II biogenesis.
What are the official names of this protein?
Protein PsbN.
What is the protein family that this protein belongs to?
Belongs to the PsbN family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: RS10_PHYAS
Sequence: MKNKEREIIKIILRAYDHHLIDQAAKKIIDIVTKTGAQIEGPIPLPTKKEVFTVLRSPFVNKDSREQFERRTHKRLIQIVNPNNKTIESLMHINLPSAIDILLKK
What is the function of this protein?
Involved in the binding of tRNA to the ribosomes.
What are the official names of this protein?
30S ribosomal protein S10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS10 family.
Protein: RPOB_STRMK
Sequence: MEDLMTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENVDPAKRTDHGLHAALKSVFPIASYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDRESSTKAIKYVKEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYSNEEMLAEFFEINTFHINPDEGVQLELVPERLRGETLGFDLADGDKVIVEAGKRITARHIKQLEASGIAALAVPDDYIVGRILSHDVVDASTGELLAQANDEITDEQLQAFRKAGVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSAVGRMKFNRRVGRKETTGEAVLYDSKYFGERNDEESKRLVAAHGDSSDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNQYGFLETPYRKVVDGKVYDEVEFLSAIEENEYVIAQANALTDAKGTLTEQFVPCRFQGESLLKPPAEVHFMDVSPMQTVSIAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERAVARDSGVTVNARRGGEIVQIDAARIVVKVNEEEIVGATDAGVDIYNLVKYTRSNQNTCINQRPLVQVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVVYIGAEVRAGDIMVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDKRARQIEESEIKRVKKDFDDQFRILEAAIYMRLRSQIVGKVVNGGAGLKKGDVITDAFLDGLKKADWFALRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITAGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMASGETVDIVLNPLGVPSRMNIGQILEVHLGWAAKGLGRKIQAMMEAQAAVADLRKFLDDIYNHDDTNVANRVDLSQFSDEELLRLARNLTDGVPMATPVFDGATEAEIKRMLELADLPSSGQTQLYDGRTGEAFDRHTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINMELEDN
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta, RNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta chain family.
Protein: RS19_THEON
Sequence: MARKKEFRYRGYTFEELLNMSLEDFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKKGKYNKPIRTHSRDMVILPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFALTRKIVQHGSPGVGATRSSMFVAIK
What is the function of this protein?
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S19.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
Protein: RPOE_LISW6
Sequence: MDLKNLTQEERSELSLIDVAHFILEQRKETILFPELVKEIQAFLGLKDAEIRERLVQFYTDMNIDGNFISLGNNMWGLRAWYPMDAIDEEVQTQTTPKKKRKSDDDDDEEILDDDVDYDDEEIVEELGEEEITLADVLLDEDEDEDDHLPDGIEGDLATVEDDYTDGDYTEDPEDK
What is the function of this protein?
Participates in both the initiation and recycling phases of transcription.  In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling.
What are the official names of this protein?
Probable DNA-directed RNA polymerase subunit delta, RNAP delta factor.
What is the protein family that this protein belongs to?
Belongs to the RpoE family.
Protein: U21_HHV6U
Sequence: MMICLVFLCVLTLARGEIYPPICPAPGVGNDEAVRAGELLLEISAYRNQRSGRVELWGSAAVNNQVFYGGMENSQIDYDFGKFLVFRCFQVFNNVHKLLFNTVSSATMHLARKRVQKCGHGKMTFISIQVQCSVNKKSIRLSRMSEASLKKQVLRVAFFLDRNNNSWIADKNFQGEDRTMLRLWNELSTYQQYLISSCNNDVKILSELYGEFRQIALPYDEKLNLNFMPVIRSSSERLFRADDLKCSFSRWLGAEGEFAVCEYSGWGVSRLGKIEIFAEKPLTFDMAWKTVKMRSSGAYTSLFRDDVTWGLIPLDKWVGDKYFCMCTNKESGDNVIVTLPEKNVEKSIQIYDEGSAMLSFAEMTSIILNLMFMGAVAVSVGILGISCFVGLKEIIYFIFVSVDYMWPFCDTLLTTAVNCFFKGRTFLRRELKI
What is the function of this protein?
Binds to MHC class I molecules in the endoplasmic reticulum and targets them from the Golgi directly to the lysosomes.  Once in the lysosomes both proteins are degraded.  In consequence, surface class I molecules are down-regulated and infected cells are masked for immune recognition by cytotoxic T lymphocytes (By similarity).
What are the official names of this protein?
Glycoprotein U21.
What is the protein family that this protein belongs to?
Belongs to the herpesviruses U21 family.
What are the subcellular locations of this protein?
Host endoplasmic reticulum membrane; Single-pass type I membrane protein.
Protein: ATG2_EMENI
Sequence: MTYFLPSFFQKRLLKYALSRLEFIDTEALDPDSLGIRWGQRSTVELRDIGLRLEKLATLLHLPASSKLLAARIRLLRLTVPADIYSSGIICEASGIDVHLHFPSEKEASAARTSLFESHEFGHESIIPNPADLAESFLQAEPKEEKEELQAALSSRSEILHRTSSSISDDEEELGLGDETVSLPSFVAAFLKGVADRLQVHVDEVSIRLDVEMKQDGPSKRQPEEKPDLISGLLIIRQISVGAVVTASSSDELHPGKRPISLSAIELALVSEPIVFSNYSQFTAPTSPSSPLRSKSSQSSSPASSVPPAPSSASSSTHAMMASTIFEPSQPTVDIPEDEHGVAKLEGSIYTYDGRFSDADTDENRSHGYLEESQDLSEKLLDDPAYLDSVIDSHLQDDDSEGLGDIQPGDIKPGDSNQSYTDRSTPSQPSLGFQAPALVDPHSRSGDHSVAVASMPNIRNIERPLDQYGPQSSMPVLSRPLTQDITGNNSQESQPAPPSPSETSSSGSVSAYFNNDLSESRLFSPEEAQSMYMSAMSHRSDSRSFIPDIPGAWDSPEATLRREAIQHHGSLGHTDETTEALEDQDRTPVSTPKPTDRETKYHSGHTLGQQQESYSESTDKHSIQPSPDVNETTKVSKSFLHIDKVTIWIPSTKPTKDHQDISEPLDARSAGGSFKDSTTHLEASQVRERSVSFSKPPSSLRTRRDSTELALAGTDTKSYTKYGLGSLNSTNISVEISCIEVQFDISIGWLMIKIGQRVLQGFGDIGQPKTSKKSTERDVQSPQDIDFTLGTLCIKFVELVPGKSFPLEEQQDPSTTFFDLLHDSVLLQSTVSGVQAHYSNANNVTDFSAAVSKFTIKFATEDLISFSEDMKMRESTKDGLLPTGNDIVLSLSKSQDSATFKTDTLPLCVSLNIQRLEDLLGRFGGLSTIMELGSSISSMSGSKGPKNDVPRRTRGVRFAGSPQSPVRSPTPSVPWKVNARIGGIVLDVSGENHYLTLRTTAAKIISRYEMMAVQIDKAKLSGPLSIHSGKDAPAKVSLNNIRVEFLYTPKEPDLDRLLSLITPSKDKYDDDDDIMIDTLFRQRKQGSVLRVTVSGAKVVVSRPELGPLQQLGEELGRLSSVAKYLPEDDRPGILTLVLIRDVEARVHIGGQIGTIAANLENAEAAHISIPSLVAGQLGSIRVTRNGDEELIGEALPPKPGFAPLPVLMVRFIADEMEPTIRVKLHNLRVEYTVSAAMAFLGVSDEMTPGDVAANMASSLANIAELHPPLQDLEEGSTTPVKPMKLKVSMRDCVLGLNPRGTAAKGLIVLANSTFNGAIHDISSSEIALDLRKAFVMIIDDVRNTDARGNLPRRRAASPQSDQIQAFTDMGYVSVSSISSATAVVRIMRLTENGAKSLDVEVRDDLLILETCADSTQTLISILSGLQPPSPPSQLKKYRTEVVPIRDMLDSLSGDAFAADNLPIGAADQAEIQDHIPERDIDYVTDFHSMTASEEELASGPSSQVRDSFHSQCHVSSSMSELDFREDHFMQQSSVGGTAHRWDSTHNTYDLSDDSKLQNSPLRVRVRDAHVIWNLFDGYDWQRTRDTISKAVKDVEKKATDRRTSGRATAAFEDDEEAIIGDCLFNSVYIGIPANRDPAELRNDINRNIDDLISETGSYATTSTVTTARRNMSPGFRGKKLRLSRSKDHKMTFELKGICADLVVFPPGSQETMSSLDVRVKELEIFDHIPTSTWRKFATYMNEAGEKELGTSMVHLEILTVRPVSYLAASELILKATVLPLRLHVDQDALDFMSRFFEFRDDSTAPSGPSQEPPYLQRSEINAIPVKLDFKPKRVDYAGLRSGRTTEFMNFFILDEADMVLKHVIVYGAKGFDKLGQALNDVWMPDIKNNQLPGVLAGLAPIRSLVNVGSGVKDLVAVPVREYRKDGRIVRSIQKGAFAFAKTTSNELVKLGAKLAIGTQTVLQGAEELLSPPTGQATTGEEDEIDEDEAPKKISLYADQPVGVVQGLRGGFRGLERDLLLTRDAIIAVPGEVQESGSAKAAAKAVLKRAPTVILRPAIGVSKAVGQTLLGAGNSMDPSNRRKIEDKYKRH
What is the function of this protein?
Lipid transfer protein required for autophagosome completion and peroxisome degradation.  Tethers the edge of the isolation membrane (IM) to the endoplasmic reticulum (ER) and mediates direct lipid transfer from ER to IM for IM expansion.  Atg2 binds to the ER exit site (ERES), which is the membrane source for autophagosome formation, using basic residues in its N-terminal region (NR) and to the expanding edge of the IM through its C-terminal region.  The latter binding is assisted by an atg18-PtdIns3P interaction.  Atg2 then extracts phospholipids from the membrane source using its NR and transfers them to atg9 to the IM through its predicted beta-sheet-rich structure for membrane expansion.
What are the official names of this protein?
Autophagy-related protein 2.
What is the protein family that this protein belongs to?
Belongs to the ATG2 family.
What are the subcellular locations of this protein?
Preautophagosomal structure membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheral membrane protein.
Protein: Y2294_BURCH
Sequence: MAGHSKWANIKHKKAAADAKRGKIWTRLIKEIQVAARLGGGDVNSNPRLRLAVDKAADANMPKDNVKRAIDRGVGGADGANYEEIRYEGYGISGAAIIVDTLTDNRTRTVAEVRHAFSKFGGNMGTDGSVAFMFDHVGQFLFAPGTSEDALMEAALEAGANDVNTNDDGSIEVLCDWQAFSAVKDALEAAGFKAELAEVTMKPQNEVEFTGDDAAKMQKLLDALENLDDVQDVYTNAVIVEE
What are the official names of this protein?
Probable transcriptional regulatory protein Bcen2424_2294.
What is the protein family that this protein belongs to?
Belongs to the TACO1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YITL_BACSU
Sequence: MLTKSAENKRNRKDDSMRPGQQLTLSIDHQTDFGYFLTDGEDTILLHNSEMTEDIEDRDEVEVFIYVDQQERLAATMKIPIISADEYGWVEVVDKVEDMGVFVDVGLSKDALVATEHLPPYEDVWPQKGDKLYCMLKVTNRGRMFAKPAPEDIISELFTDASEDLMNKELTGTVYRLIASGSFVITDDGIRCFIHPSERKEEPRLGSRVTGRVIQVKEDGSVNLSLLPRKQDAMSVDAECILTYMRMRNGAMPYSDKSQPDDIRERFNMSKAAFKRALGHLMKNGKVYQENGWTYEKK
What are the official names of this protein?
Uncharacterized protein YitL.
Protein: UVRC_DESHY
Sequence: MHYRPSPTRIIPRCSNMEILREKLSLLPDKPGVYLMKDASGQIIYVGKAKVLKNRVRSYFTGSHNGKTQLMISLIADFETIITDSEVEALLLECNLIKKHNPKYNILLRDDKTYPFITITDEAHPRILVTRQVKKGAGKYYGPYPNATAAKEAARLLNRLFPFRKCRQIPNKPCLYYHLGQCLGPCQVDVPKEAYDKIRKEAAAFLKGDQGAILKALEKKMKEASENLEFERAKEYRDLMEDLKKVGEKQNITLNDFVDRDVVGYAYTQDQLCIQIFYLRQGKLLSRDNFIFPYYEEPEEAFVSFLAQFYTESSALPQEILLPPLDISVLTKLFPMVVPQKGQKRDLVQMAMENAQTTLHEQISIEIRNLTECTQALAEIGNALGIPSLRTIESFDISNIAGTHSVAGMIQFLDGKPNRSQYRKFKIQPMPNMDDTASMHQVIERRYARLQQENLPLPDLILVDGGKGQIHAALAALHSLNAAIPVAGMVKNDKHQTSALIDAMDRIHSLDRRSAGFRLLERIQNEVHRFAITFHRQQRAKSMTLSELDGIAGVGPKRRQQLLKFFKSIDSIRQATLEELQQSGLPAPAAAAVYQHFNSHKEENHDS
What is the function of this protein?
The UvrABC repair system catalyzes the recognition and processing of DNA lesions.  UvrC both incises the 5' and 3' sides of the lesion.  The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
What are the official names of this protein?
UvrABC system protein C, Protein UvrC, Excinuclease ABC subunit C.
What is the protein family that this protein belongs to?
Belongs to the UvrC family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RBP_BPLP2
Sequence: MTIKNFTFFSPNSTEFPVGSNNDGKLYMMLTGMDYRTIRRKDWSSPLNTALNVQYTNTSIIAGGRYFELLNETVALKGDSVNYIHANIDLTQTANPVSLSAETANNSNGVDINNGSGVLKVCFDIVTTSGTGVTSTKPIVQTSTLDSISVNDMTVSGSIDVPVQTLTVEAGNGLQLQLTKKNNDLVIVRFFGSVSNIQKGWNMSGTWVDRPFRPAAVQSLVGHFAGRDTSFHIDINPNGSITWWGANIDKTPIATRGNGSYFIK
What is the function of this protein?
Binds to the host phosphopolysaccharides at the onset of infection.  Upon activation by calcium, the receptor binding proteins change their conformation, presenting their binding sites to the host, and a channel opens at the bottom of the baseplate for DNA ejection.
What are the official names of this protein?
Receptor binding protein, RBP, Gene product 18, Gp18.
What is the protein family that this protein belongs to?
Belongs to the skunalikevirus receptor binding protein family.
What are the subcellular locations of this protein?
Virion. Note=Part of the baseplate.
Protein: YP14B_YEAST
Sequence: MESQQLSNYSPISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLGQELTESTVNHTNHSDDELPGHLLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVQYGDFYWVSKRYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSASQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKPISEINLRAPREVDPNISESNILPSKKRSSTPQISNIESTGSGGMHKLNVPLLAPMSQSNTHESSHASKSKDFRHSDSYSNNETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIVPIKTPTTVSEQNTEESIIADLPLPDPPPEPPTELSDSFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSHYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWIH
What is the function of this protein?
Integrase (IN) targets the VLP to the nucleus, where a subparticle preintegration complex (PIC) containing at least integrase and the newly synthesized dsDNA copy of the retrotransposon must transit the nuclear membrane.  Once in the nucleus, integrase performs the integration of the dsDNA into the host genome (By similarity).
What are the official names of this protein?
Transposon Ty1-PR3 Gag-Pol polyprotein, Gag-Pol-p199, TY1A-TY1B, Transposon Ty1 TYA-TYB polyprotein, p190.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: RS7_LISMH
Sequence: MPRKGPVAKRDVLPDPIYNSKLVTRLINKMMVDGKRGKSQAILYSAFDIIAQETGKDPMEVFEQAMKNIMPLLEVKARRVGGANYQVPIEVRADRRSTLGLRWLVNYARLRGEKTMEVRVAREIMDAANNTGASVKKREDTHKMADANRAFAHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: RSMJ_ALIFM
Sequence: MQIALLSEDPNRQSELEAIAARWGLKHDEDNVFALVLTEQQLELRKRDEPKLGAIFVDLVSGAVAHRRKFGGGKGQSIAKAVGLNKGATPIVLDGTAGLGRDAFVLASLGCKVQMVERHPVVAALLDDGLARAKQDAEIGVWVAERMSLLHASSHDALEQLMAQDDFVQPDVVYLDPMYPHPVNKKKSALVKKEMRVFQSLVGADNDADALLAPALLMATKRVVVKRPDYAEWLDNQKPSMAIETKKNRFDVYVNAAMA
What is the function of this protein?
Specifically methylates the guanosine in position 1516 of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase J, 16S rRNA m2G1516 methyltransferase, rRNA (guanine-N(2)-)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmJ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CYF_LOTJA
Sequence: MQTRNAFSYIKEEITRSISVLLVIYIIIRAPISNAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQTVLPDTVFEAVVRIPYDMQVKQVLANGKRGALNVGAVLILPEGFELAPTDRISPEIKEKMGNLSFQSYRPTKKNILVVGPVPGQKYSEITFPILSPDPATNRDVNFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATTSGIINKIIRKDKGGYEITIVDASDGREVIDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLASIIFAQIFLVLKKKQFEKVQLSEMNF
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
What are the official names of this protein?
Cytochrome f.
What is the protein family that this protein belongs to?
Belongs to the cytochrome f family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.