PharMolix/UniProtQA huggingface dataset:
Protein: IF3_LEGPA
Sequence: MSAPTKRENDRARINEQITVPEVRLIDVDGNQAGIVSTREALRAAEESGLDLVEISPTAKPPVCRIMDYGKFLFELSKKQAEARKKQKQIQVKELKFRPTTEDGDYQVKLRNLIRFLNHGDKVKITLRFRGREMAHQELGMKILERLQADTADVAVVEQHAKREGRQLLMVLSPKKTK
What is the function of this protein?
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
What are the official names of this protein?
Translation initiation factor IF-3.
What is the protein family that this protein belongs to?
Belongs to the IF-3 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS7_CHLCV
Sequence: MSRRHAAEKKVIPADPIYGSVTLERFINKVMMHGKKSIARKIVYSALERFSKKIGAENVLEAFKEALENAKPLLEVRSRRVGGATYQVPVEVAAGRRDCLAMKWIINNARNKPGKCMEVGLATELIDCFNKQGATIKKREDTHRMAEANKAFAHYKW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: DPOLA_HUMAN
Sequence: MAPVHGDDSLSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDFTGVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGKARNKDKRNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQITPPPVMILKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQVESTEEEQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTVSYLGSFLPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYNQPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVYEEFDEKIATKYKIMKFKSKPVEKNYAFEIPDVPEKSEYLEVKYSAEMPQLPQDLKGETFSHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQLLNQPVSWCKVEAMALKPDLVNVIKDVSPPPLVVMAFSMKTMQNAKNHQNEIIAMAALVHHSFALDKAAPKPPFQSHFCVVSKPKDCIFPYAFKEVIEKKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPHWSKIGRLKRSNMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTERVVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTNKYKKGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASEAQKVTEDGEQEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVHHYHKDEENDALLGGPAQLTDEEKYRDCERFKCPCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQLSNKLIMDIRRFIKKYYDGWLICEEPTCRNRTRHLPLQFSRTGPLCPACMKATLQPEYSDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLKNTAEQFLSRSGYSEVNLSKLFAGCAVKS
What is the function of this protein?
Catalytic subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.  During the S phase of the cell cycle, the DNA polymerase alpha complex (composed of a catalytic subunit POLA1, a regulatory subunit POLA2 and two primase subunits PRIM1 and PRIM2) is recruited to DNA at the replicative forks via direct interactions with MCM10 and WDHD1.  The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.  These primers are initially extended by the polymerase alpha catalytic subunit and subsequently transferred to polymerase delta and polymerase epsilon for processive synthesis on the lagging and leading strand, respectively.  The reason this transfer occurs is because the polymerase alpha has limited processivity and lacks intrinsic 3' exonuclease activity for proofreading error, and therefore is not well suited for replicating long complexes.  In the cytosol, responsible for a substantial proportion of the physiological concentration of cytosolic RNA:DNA hybrids, which are necessary to prevent spontaneous activation of type I interferon responses (PubMed:27019227).
What are the official names of this protein?
DNA polymerase alpha catalytic subunit, DNA polymerase alpha catalytic subunit p180.
What is the protein family that this protein belongs to?
Belongs to the DNA polymerase type-B family.
Protein: PNP_SYMTH
Sequence: MPPGAPDGPGHRRRTNVTASFSMELGGRTMTLETGRLAKQASGSVLVNYGDSVVLCTAVGSATPREGVDFFPLTVDYEERMYSVGRIPGNWFRREGRPTSKAILWARLTDRPIRPLFPEGFRNDVQVVCTVLSVDPDHPVEIMGMIGASAALTISDIPFEGPIGGVIVGLVDGQFVINPTAEQQERSEMHLVVAGTEHAVLMVEAGAKEVPEQTMLDAILFGHEVIKNTIIPTIKQMQAEVGKPKREVVLFNPPPELEQAVREAATVRLREAVRNPDKLAREEAVAAVGEAVQAELAEQFPESEKHIAYLLKKVLKEEVRRAIIEEGIRPDGRSLTEIRPIECAVDLLPRPHGSGLFQRGQTQVLSICTLGTLGDMQKLDDLTLEETKRFMHHYNFPPYSVGETRPLRGPGRREIGHGALAERALEPVIPPEEEFPYTIRVVSEVLESNGSSSMASVCGSTLALMAAGVPIKAPVAGVAMGLVEDPETGRYAVLTDIQGIEDALGDMDFKVAGTKKGVTALQMDMKISGTSREILEKALMQAREGRMFIMEKMLACISEPRKELSPWAPRIITMKISPEKIRDVIGKGGSTINKIIEETKVGHTKVEIDIQDDGTIYIAAVNLEAGERARQMIEALVKDPEPGMIYTGRVTRLMQFGAFVEILPGKEGLVHISELSDKRVARVEDVVNIGDEVTVKVTEIDRLGRINLSIKDAMPKQAASQPSGRPEARQPQPKPGQGKPGPAKAGAGRPGPGKPGPGRHGR
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATG37_GIBZE
Sequence: MADSVDRVFVHALNTVKKIPKTGASRPPPTDRLRLYGLYKQAMEGDVDGVMERPTAASGLASDELQREKDKWDAWNLQKGLSRTESKRRYIEALIDTMHRYATTPDAEELVSELEFVWNQIKDNSPSSSLSSPRPNQSTGAGAQQPQQEPEQASDGEGPLKELRPMSEYDEAELRSQRQVDLEDDEVDVPTSDRSSGRWQRKVERALTTMSAEVAALREQIMTGREWRTKKERSVPAWVKWFAWLLVKHIFADLVILSVVLLWLRKRKDQRLEDIVRAGVRLMREYVRNVLPSRG
What is the function of this protein?
Acyl-CoA binding protein which acts as the peroxisome receptor for pexophagy (By similarity).  Required for both micropexophagy and macropexophagy, but not for the cytoplasm to vacuole transport (Cvt) or autophagy pathways (By similarity).  Required for functional micropexophagic apparatus (MIPA) and relocation of ATG11 to the peroxisome-sequestering arms of the vacuole (By similarity).  Binds palmytoyl-CoA but not oleyl-CoA (By similarity).
What are the official names of this protein?
Autophagy-related protein 37.
What is the protein family that this protein belongs to?
Belongs to the ATG37 family.
What are the subcellular locations of this protein?
Peroxisome membrane; Single-pass membrane protein.
Protein: ATPE_CORA7
Sequence: MADITAELVSVERLLWTGKATMVTAETTEGEIGVLPGHEPMVGQLIDNGVVTIHPVDGERLVAAVQGGFLSVSENKITVLADWSIWASEVDEAQAQEDLKSERELTRSRGDAALRATRRLNS
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
ATP synthase epsilon chain, ATP synthase F1 sector epsilon subunit, F-ATPase epsilon subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase epsilon chain family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: GHRB_SALG2
Sequence: MKPSIILYKTLPDDLLHRLEAHFTVTQVPNLHPETVARHAQAFASAQGLLGASETVNRALLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVADTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQRAHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQFARMKSSAIFINAGRGPVADENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVVAVPHIGSATHETRYNMMACAVDNLIDALQGKIEKNCVNPQAAG
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively.
What are the official names of this protein?
Glyoxylate/hydroxypyruvate reductase B.
What is the protein family that this protein belongs to?
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DAPB_CLAMS
Sequence: MTTTVAVVGATGRMGQLISQIVEASDEFELVASLDSKGELSDMLGADIAVDVTLPAVSQGVVEYAVAHGMNVLVGTSGWTGERITELERRITGNLAVGVVIIPNFSVGSVLATSFAQMAARFYDSIEIVEAHGASKIDSPSGTAVRTAELMSQARGSRGPVQAPHTDQRARGQQVASIPVHSLRMQGVVAKQDVVFGGNGEVLTISHDTLAPSAYEAGILLALRATRTARGVVVGLDRLIDMDGSRERATQTAPTGAASGPVDDGGPSGQAATVTSA
What is the function of this protein?
Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
What are the official names of this protein?
4-hydroxy-tetrahydrodipicolinate reductase, HTPA reductase.
What is the protein family that this protein belongs to?
Belongs to the DapB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GRAE_GRASX
Sequence: FIGGIISFIKKLF
What is the function of this protein?
Has lytic and hemolytic activities.  Has antibacterial activity with a broad spectrum against various species of bacteria including both Gram-positive and Gram-negative groups.
What are the official names of this protein?
Grammistin Gs E.
What is the protein family that this protein belongs to?
Belongs to the grammistin family. Group 2 subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: COQ7_YEAST
Sequence: MLSRVSVFKPASRGFSVLSSLKITEHTSAKHTEKPEHAPKCQNLSDAQAAFLDRVIRVDQAGELGADYIYAGQYFVLAHRYPHLKPVLKHIWDQEIHHHNTFNNLQLKRRVRPSLLTPLWKAGAFAMGAGTALISPEAAMACTEAVETVIGGHYNGQLRNLANQFNLERTDGTKGPSEEIKSLTSTIQQFRDDELEHLDTAIKHDSYMAVPYTVITEGIKTICRVAIWSAERI
What is the function of this protein?
Catalyzes the hydroxylation of 2-hexaprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) during ubiquinone biosynthesis (PubMed:16624818, PubMed:8621692, PubMed:9452453, PubMed:23940037).  Has also a structural role in the COQ enzyme complex, stabilizing COQ3 and COQ4 polypeptides (PubMed:16624818).
What are the official names of this protein?
5-demethoxyubiquinone hydroxylase, mitochondrial, DMQ hydroxylase, Catabolite repression protein 5, Ubiquinone biosynthesis monooxygenase COQ7.
What is the protein family that this protein belongs to?
Belongs to the COQ7 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: RL5_CAMJ8
Sequence: MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELAKDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDKLISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTAQNDKQAQKLLELIGVPFTKGK
What is the function of this protein?
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.  In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement.  Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
What are the official names of this protein?
50S ribosomal protein L5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
Protein: RL51_ARATH
Sequence: MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDEE
What is the function of this protein?
Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.  The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules.  The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain.  The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel.  Seems involved in the regulation of cell proliferation (PubMed:19392710).  Essential in leaf polarity establishment, probably having a role for translation in leaf dorsoventral patterning to specify leaf adaxial identity (PubMed:18305008, PubMed:18305007).
What are the official names of this protein?
60S ribosomal protein L5-1, Ribosomal protein L5 A, Protein ASYMMETRIC LEAVES1/2 ENHANCER 6, Protein OLIGOCELLULA 5, Protein PIGGYBACK 3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Nucleus, nucleolus. Nucleus, nucleoplasm.
Protein: YKZ5_YEAST
Sequence: MFLDYSGYEALTEINSSFGKYVLLLQQFEGCRSLKDRLQMLKDLGREFMIFENLNVEDFRESKNMIHRFYTMVISLRQIMEIGPLVRRSPAVLVVEFDCPVEDCLDELDPLHPLNRAFIFIHKQWTYYHQYYIVEKVKKVILDMAPVKEDDWSILHKVVYSEGFVERRYKKKKYLGDIYIPQPLMKSNKITTISNFSQLTKISNVRVYRFNATAACDPQNLNKKNLSIKELKDKDLPNLIWTLEPEKFYVDMRPYKEHEERKKRREEEAKVRMQGEEQENIMIERKKMDSIEVEASSGLKNIIKTPLANRVVNTFNNCAAVVIGYVTEVDKVKDDNEEKNNDRPKIANDGIAQKSRSESEDNAGTPMENAYFQPEPQDNDQNNISWNTTMKDIDPIYMSERCARVWRKEQQMLGLEKAQTFEKKYCKDQMVMDENQVEEPGKHSERHTKNQVVRPRTKIASSASKNDNSNNKNSKSCKNCHKEEAHGLVREYLKIKLNISPHGERNQRTKDKRKCIMKYNASSNNINKMPGESEVLGSTILTDIHFKDVVTVKFRDFKAKFRKVKINA
What are the official names of this protein?
Uncharacterized protein YKR015C.
What is the protein family that this protein belongs to?
To yeast YJL043w.
Protein: BUR1_YEAST
Sequence: MSDNGSPAVLPKTEFNKYKIGKVKSTPAIQRDAKTNLTYIKLRKRSSEKVYGCTVFQNHYREDEKLGQGTFGEVYKGIHLETQRQVAMKKIIVSVEKDLFPITAQREITILKRLNHKNIIKLIEMVYDHSPDITNAASSNLHKSFYMILPYMVADLSGVLHNPRINLEMCDIKNMMLQILEGLNYIHCAKFMHRDIKTANILIDHNGVLKLADFGLARLYYGCPPNLKYPGGAGSGAKYTSVVVTRWYRAPELVLGDKQYTTAVDIWGVGCVFAEFFEKKPILQGKTDIDQGHVIFKLLGTPTEEDWAVARYLPGAELTTTNYKPTLRERFGKYLSETGLDFLGQLLALDPYKRLTAMSAKHHPWFKEDPLPSEKITLPTEESHEADIKRYKEEMHQSLSQRVPTAPRGHIVEKGESPVVKNLGAIPRGPKKDDASFLPPSKNVLAKPPPSKIRELHQNPRPYHVNSGYAKTAIPPPAAPAGVNRYGPNNSSRNNRFSGNSTAPNNSRNPVNRFHPETNVSSKYNKVPLPLGPQSRYQGNSNESRYKNSPNDSRYHNPRYVNKPETNFNRQPQKYSRQESNAPINKNYNPSNGSRNMAGDHHQGSRPSHPQFPISPSQGQHQLTSKPIEKKNGSFKDERAKPDESKEFQNSDIADLY
What is the function of this protein?
Serine/threonine-protein kinase component of the BUR kinase complex involved in transcription regulation.  This complex phosphorylates 'Ser-120' of the UBC2/RAD6 ubiquitin-conjugating enzyme (E2), leading to monoubiquitination of histone H2B, the localization of the PAF1 complex to the chromatin, and the silencing of telomeric-associated genes.  Also required for histone H3 'Lys-4' trimethylation.  May phosphorylate the 'Ser-5' of the RBP1 carboxy-terminal domain (CTD) repeats.  Necessary for the recovery from pheromone-induced growth arrest in the cell cycle G1 phase.  The kinase activity of the complex requires the presence of BUR2.
What are the official names of this protein?
Serine/threonine-protein kinase BUR1, Bypass UAS requirement protein 1, Suppressor of GPA1-Vall50 mutation protein 1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: TRUB_FRATH
Sequence: MKKNRLNLNGVVVINKAKDISSNKVLQQLKYLFNAQKAGHTGTLDPMATGVLPICFGRATKIAQYLLDADKEYIATIRLGIETDSGDAEGEIIAKSINIPELSAEYLEIVLAKFSGDVVQIPPMYSALKYNGQPLYKLAREGKTVEVKSRNIKIYELELLEFNIDSLKIRVKCSKGTYIRSLAIDIGKTLGCGGHLIALQRTQSGPFKLSEAFRLEQLKDLSFEQKIASITNIESVFIDKPIYSLLEEEKNDLYKRGLFADKPHLDGTVRIYDVEKFVAIAEFDKGKLINKKFFDQDILISE
What is the function of this protein?
Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase B, tRNA pseudouridine(55) synthase, Psi55 synthase, tRNA pseudouridylate synthase, tRNA-uridine isomerase.
What is the protein family that this protein belongs to?
Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
Protein: FAR3_LOBRE
Sequence: LPDSSFLRL
What is the function of this protein?
FMRFamides and FMRFamide-like peptides are neuropeptides.
What are the official names of this protein?
Extended FMRFamide-3, FMRFa-3.
What is the protein family that this protein belongs to?
Belongs to the FARP (FMRF amide related peptide) family.
What are the subcellular locations of this protein?
Secreted.
Protein: RBL_VIBAC
Sequence: MSPQTETKASAGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALXALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVRSGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEVIRXASKWSPELAAACEVWKEIKFEFEAMDTL
What is the function of this protein?
RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process.  Both reactions occur simultaneously and in competition at the same active site.
What are the official names of this protein?
Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit.
What is the protein family that this protein belongs to?
Belongs to the RuBisCO large chain family. Type I subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: DUT_IDILO
Sequence: MTQVEVKILDDRIGQSIPLPEYATQGSAGMDLRACLDQPLTIEPGQTQLIGTGIAMYIGDPNYAATILPRSGLGHKHGLVLGNLVGLIDSDYQGELKVSCWNRSNQAYTIEPGDRIAQLVILPVVQAQMSIVEEFHETDRGEGGFGHSGRS
What is the function of this protein?
This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
What are the official names of this protein?
Deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTPase, dUTP pyrophosphatase.
What is the protein family that this protein belongs to?
Belongs to the dUTPase family.
Protein: TSP2_HUMAN
Sequence: MVWRLVLLALWVWPSTQAGHQDKDTTFDLFSISNINRKTIGAKQFRGPDPGVPAYRFVRFDYIPPVNADDLSKITKIMRQKEGFFLTAQLKQDGKSRGTLLALEGPGLSQRQFEIVSNGPADTLDLTYWIDGTRHVVSLEDVGLADSQWKNVTVQVAGETYSLHVGCDLIDSFALDEPFYEHLQAEKSRMYVAKGSARESHFRGLLQNVHLVFENSVEDILSKKGCQQGQGAEINAISENTETLRLGPHVTTEYVGPSSERRPEVCERSCEELGNMVQELSGLHVLVNQLSENLKRVSNDNQFLWELIGGPPKTRNMSACWQDGRFFAENETWVVDSCTTCTCKKFKTICHQITCPPATCASPSFVEGECCPSCLHSVDGEEGWSPWAEWTQCSVTCGSGTQQRGRSCDVTSNTCLGPSIQTRACSLSKCDTRIRQDGGWSHWSPWSSCSVTCGVGNITRIRLCNSPVPQMGGKNCKGSGRETKACQGAPCPIDGRWSPWSPWSACTVTCAGGIRERTRVCNSPEPQYGGKACVGDVQERQMCNKRSCPVDGCLSNPCFPGAQCSSFPDGSWSCGSCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQDNCPYISNANQADHDRDGQGDACDPDDDNDGVPDDRDNCRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDDVCPENNAISETDFRNFQMVPLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRDDDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNALWHTGNTPGQVRTLWHDPRNIGWKDYTAYRWHLTHRPKTGYIRVLVHEGKQVMADSGPIYDQTYAGGRLGLFVFSQEMVYFSDLKYECRDI
What is the function of this protein?
Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions.  Ligand for CD36 mediating antiangiogenic properties.
What are the official names of this protein?
Thrombospondin-2.
What is the protein family that this protein belongs to?
Belongs to the thrombospondin family.
Protein: ESSD_STAA3
Sequence: MTKDIEYLTADYDNEKSSIQSVIDAIEGQDFLDVDTTMDDAVSDVSSLDEDGAISLTSSVVGPQGSKLMGYYQNELYDYASQLDSKMKEIIDTPFIEDIDKAFKGITNVKLENILIKNGGGHGRDTYGASGKIAKGDAKKSDSDVYSIDEILKSDQEFVKVIDQHYKEMKKEDKKLSKSDFEKMMTQGASCDYMTVAEAEELEEQKKKEEAIEIAALAGMVVLSCINPVAGAVAIGAYSAYSAANAATGKNIVTGRKLSKEERIMEGLSLIPLPGMGFLKGAGKSLMKLGFKGGEKFAVKTGLQKTMQQAVSRISPKMGMMKNSVLNQSRNFAQNTHVGQMLSNMRGQATHTVQQSRNWIGQQAQNVKRIVNNGLDKEIAHPFKQQLAPAGMGGIKFAETTTLRNMGQNIKRAVTPQNHVTHGPKDSMVRSEGKHSISSHEMNSSKYVESPNYTKVEFGEHYARLRPKKLKANIEYTTPTGHIYRTDHKGRIKEVYVDNLSLKDGDRNSHAQRTVGGEDRLPDDDGGHLIARMFGGSKDIDNLVAQSKFINRPFKEKGHWYNLEKEWQEFLNSGKEVKNIKMEVKYSGNSQRPTIFKVEYEINGERNIRRILNK
What is the function of this protein?
Component of the type VII secretion system (Ess) (Probable).  Plays a role in Ess secretion during infection.  Required for the efficient secretion of EsxA.  Required for abscess formation and staphylococcal persistence in host tissues (PubMed:21278286, PubMed:24033479, PubMed:27795322).  Possesses a toxic DNase activity that is modulated by EsaG by forming a nuclease toxin-antitoxin pair.  This nuclease toxin targets competitor bacteria (By similarity).
What are the official names of this protein?
Type VII secretion system protein EssD, Ess-associated gene D, Nuclease toxin EssD.
What is the protein family that this protein belongs to?
Belongs to the EssD family.
What are the subcellular locations of this protein?
Secreted. Cell membrane. Note=Released from the cell in a form that is immediately active while EssG partner protein remains in the producing cell where it may potentially serve further protective functions.
Protein: CRR28_ARATH
Sequence: MFSTFGSVPILTVVAIQLFLIRNVLSLNLTNAYLHHKCNNTQGIYKRGSAFEKNLNIALRTVIFNGDFRTGFRYGDVGEDPNTVFVMYQCRGDSYWSNCRTCVTTALSGLRKRCPGNKGAIIWYDQCLFEISTVDSYHKIDYENDFYLSNPKNVSNRELFNRETSALLEKLTTKATDKKNIDGANQLVLYAAGEKRIGTKKVYAMVQCTKDLVFTTCSSCLEWIFRMYSDCCDGKQGGRVLGTSCNFRYELYPFLRN
What are the official names of this protein?
Putative cysteine-rich repeat secretory protein 28.
What is the protein family that this protein belongs to?
Belongs to the cysteine-rich repeat secretory protein family.
What are the subcellular locations of this protein?
Secreted.
Protein: VEAC_BPP22
Sequence: MSGQSKYYDYYMVEGEDVKELIQSYDTINDQRNSILTTAAEKVGAIAWTTARSWGGEGGLLQSFVWEKGYEFPCQITIKREDFLDGKRVVIARGKGNTKEGRAYNKELDAIMHNANAKLKSLPEWNYYITNHYGIMRTGIGGQSGRGFGFVMLSTYGGKHPQRDDCLIFAIPNNKEERHGVVVIPDAFKKITYGQFYDIANAKEDEEETAE
What are the official names of this protein?
Eac protein.
Protein: RS24_SULIM
Sequence: MESQAKVKISDKAEGIIERDVQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQENLVVVRKISTSYGAGISNVKLHIYKSREILEKIEPKYLLDRDAGTKQKKGGSKGGQGAKG
What are the official names of this protein?
30S ribosomal protein S24e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eS24 family.
Protein: PROB_RHOP5
Sequence: MSLPELKNFRRIVVKVGSSLLIDSAAGEVRATWLAALAADIAALHRDGRDVMVVSSGSIALGRSRLKLPRGPLKLEESQAAAAVGQIALARIWSEVLGAHGIGAGQILVTFQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATAEIRYGDNDRLAARVATMASADLLILLSDIDGLYTAPPVANPDAELIPVVESVSAEIEAMAGGAESELSRGGMYTKIEAAKIATTAGTHMLIANGKIEHPLQAIADGGRCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVLVRGPDTHEIGRGLVAYDAEDADKIKGRSSPDVLIILGISGRSEMIHRDDLVIGSVPGV
What is the function of this protein?
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
What are the official names of this protein?
Glutamate 5-kinase, Gamma-glutamyl kinase, GK.
What is the protein family that this protein belongs to?
Belongs to the glutamate 5-kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YQGF_BRUC2
Sequence: MATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRVKFTIDAQVLLKALETDKVGVIVIGLPMNMDGTAGPRVQATRAFVRTMQPLTDLPFVFWDERLSTVAAERALIGMDVSRGKRADRIDSAAAAFILQGALDRLHMMRRNDYDAG
What is the function of this protein?
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
What are the official names of this protein?
Putative pre-16S rRNA nuclease.
What is the protein family that this protein belongs to?
Belongs to the YqgF nuclease family.
What are the subcellular locations of this protein?
Cytoplasm.