PharMolix/UniProtQA huggingface dataset:
Protein: GRPE_SODGM
Sequence: MSSKEQNTPDEQVSQESEMEQGQQAEAAPETVDVVDPRDERIAELEAALSQAQQREHDSVLRAKAEMENVRRRSEQDVEKAHKFALERFAGELLPVIDNLERALDMSDKANAELASTIEGIELTLKSLLDAVRKFGLDVVGDTHVPFNPEVHQAMTMLESDEHEPNQVMMVMQKGYTLNGRLIRPAMVAVSKAKS
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE.  It is the nucleotide exchange factor for DnaK and may function as a thermosensor.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.
What are the official names of this protein?
Protein GrpE, HSP-70 cofactor.
What is the protein family that this protein belongs to?
Belongs to the GrpE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUXG_SCHPO
Sequence: MSKAGAPDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEKVKIGSVAIRGNSVIMIETLDKMT
What is the function of this protein?
Plays a role in pre-mRNA splicing as a core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome (By similarity).
What are the official names of this protein?
Small nuclear ribonucleoprotein G, snRNP-G, Sm protein G, Sm-G, SmG.
What is the protein family that this protein belongs to?
Belongs to the snRNP Sm proteins family.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm.
Protein: CO8B_RAT
Sequence: MKTGAQVWRALAKSCLLCAALGCLHLPGARGEKPDFFETNAVNGSLVRSRPVRSVDVTPAPTDCQLSTWSSWTACDPCQKKRYRHTYLLRPSQFYGELCDFSDKEVEDCVTNRACRSQVRCEGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCRRIYKKCSQDMEQYWAIGNLASGINLFTNTFEGPVLDHRYYAGACSPHYILNTNFRKPYNVESYTPQTQGKYEFALTEYESYFDFEHNVTEKATSKSSFKFGFKLDGLVEFGVRKESNEGRHYISRTKRFSHTKSKFLHARSVLEVAHYKLKSRQLMLHYEFLQRVKSLPLEYSYGEYRDLLRDFGTHFITEAVLGGIYEYTLIMNKDAMERGDYTLDHVSACAGGGFQIGGNVYKVYLKLGVSEKKCSDILNEIKDRNKRRTMVEDLVVLVRGGTSEYITSLAYKDLPTAELMKEWGDAVQYNPAIIKLKAEPLYELVTATDFAYSSTVKQNMKKALEEFQMEVSSCRCAPCRNNGVPILKESRCECICPAGFQGVACEVTNRKDIPIDGKWSCWSDWSPCSGGRKTRQRQCNNPAPQRGGSPCSGPASETLDC
What is the function of this protein?
Constituent of the membrane attack complex (MAC) that plays a key role in the innate and adaptive immune response by forming pores in the plasma membrane of target cells.
What are the official names of this protein?
Complement component C8 beta chain, Complement component 8 subunit beta.
What is the protein family that this protein belongs to?
Belongs to the complement C6/C7/C8/C9 family.
What are the subcellular locations of this protein?
Secreted.
Protein: PRP4_ARATH
Sequence: MRILPEPRGSVPCLLLLVSVLLSATLSLARVVEVVGYAESKIKTPHAFSGLRVTIDCKVNKGHFVTKGSGNIDDKGKFGLNIPHDIVSDNGALKEECYAQLHSAAGTPCPAHDGLESTKIVFLSKSGDKHILGLKQNLKFSPEICVSKFFWPMPKLPPFKGFDHPFPLPPPLELPPFLKKPCPPKYSPPVEVPPPVPVYEPPPKKEIPPPVPVYDPPPKKEVPPPVPVYKPPPKVELPPPIPKKPCPPKPPKIEHPPPVPVYKPPPKIEKPPPVPVYKPPPKIEHPPPVPVHKLPKKPCPPKKVDPPPVPVHKPPTKKPCPPKKVDPPPVPVHKPPPKIVIPPPKIEHPPPVPVYKPPPKIEHPPIYIPPIVKKPCPPPVPIYKPPVVIPKKPCPPPVPVYKPPVVVIPKKPCPPLPQLPPLPKFPPLPPKYIHHPKFGKWPPLPPHP
What are the official names of this protein?
Proline-rich protein 4, AtPRP4.
What is the protein family that this protein belongs to?
Belongs to the plant proline-rich protein superfamily.
What are the subcellular locations of this protein?
Secreted, cell wall.
Protein: CCD63_RAT
Sequence: MKKHRRKVSEPLPELSEKAKEQLAEAELRKLRQQFRKMVDSRKSSNFRNQRMIASQYKEIENLKAEQAETTLLLSLVKSPKNLDLNQKNFTELRFLLQTKGDYEALISSMKVLLGELDDKIVQMERKITNQRQIFLKTQEANNPRKLQKQIHILETRLNLVTVHFDTMLTSNAQLRKDIEDLLFEKAAYDHVYQQLQRRLQTQKKTMNVAIEQSTQAYEQRVEAMARMAAMKDRQQKDISQYNLEIRELERLYDHENKLKSFLLVKLNDRTEFEDQAKKQEAVKIKKHGKKRKGESFESYEVAHLRLLKLAENGDLNQLTEDFLAKEEKNFARFTYVTELNNDMETMHKRTQRIQDDIINLRSQQQSSHEGTRNILKQMEEKLRKTTEDTDIYENRYREMSKTLEYLKNSVEKLFKKINCNATEILGKLGETGKITDSNLQQYFAIIEKKTNDLLLLESFRRLQEAEGPDVDVPQPFVNPFWGGSALLKPPEPLRVVPPVFGADSFSDKVEEVPHRALSWVQWNTLWTTVASGSWSWRTTFRRNEEKNHRRHCWRRGTR
What is the function of this protein?
Plays a role in spermiogenesis.  Involved in the elongation of flagella and the formation of sperm heads.
What are the official names of this protein?
Coiled-coil domain-containing protein 63.
Protein: PSAC_AGRST
Sequence: MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGPETTRSMALSY
What is the function of this protein?
Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity.  FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin.  The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex.  Required for binding of PsaD and PsaE to PSI.  PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn.
What are the official names of this protein?
Photosystem I iron-sulfur center, 9 kDa polypeptide, PSI-C, Photosystem I subunit VII, PsaC.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side.
Protein: ATPF_CLOB1
Sequence: MNISIPQIIAAILNFIILLLIVKHFWFDKITAVVDSRQSEIINKIEDTDKNQKLALELKEKNELELSNAKKQGKTIVEEYKSKAENVYEDIVKEAHEEADRIIKKSRLEAERQKKNAEEEIRAEAVELAVLVSSKTLEKTIDDLEHRRLIKDFISKVGI
What is the function of this protein?
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
What are the official names of this protein?
ATP synthase subunit b, ATP synthase F(0) sector subunit b, ATPase subunit I, F-type ATPase subunit b, F-ATPase subunit b.
What is the protein family that this protein belongs to?
Belongs to the ATPase B chain family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass membrane protein.
Protein: CPXD_RHIRD
Sequence: MEERRVSISSITWRFPMLFAPVDDVTTIDDLTLDPYPIYRRMRVQNPVVHVASVRRTFLTKAFDTKMVKDDPSRFSSDDPSTPMKPAFQAHTLMRKDGTEHARERMAMARAFAPKAIADHWAPIYRDIVNEYLDRLPRGDTVDLFAEICGPVAARILAHILGICEASDVEIIRWSQRLIDGAGNFGWRSELFERSDEANAEMNCLFNDLVKKHRSAPNPSAFATMLNAPDPIPLSQIYANIKIAIGGGVNEPRDALGTILYGLLTNPEQLEEVKRQQCWGQAFEEGLRWVAPIQASSRLVREDTEIRGFIVPKGDIVMTIQASANRDEDVFEDGESFNVFRPKSAHQSFGSGPHHCPGAQISRQTVGAIMLPILFDRFPDMILPHPELVQWRGFGFRGPINLPVTLR
What is the function of this protein?
Not essential for virulence, but may be involved in the detoxification of plant protective agents at the site of wounding.
What are the official names of this protein?
Cytochrome P450-pinF2, plant-inducible.
What is the protein family that this protein belongs to?
Belongs to the cytochrome P450 family.
Protein: Y871_METJA
Sequence: MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFEMPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQAAIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI
What are the official names of this protein?
Uncharacterized protein MJ0871.
What is the protein family that this protein belongs to?
To M.jannaschii MJ0880, MJ1556 and MJ1589.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: YSPT_SHISO
Sequence: MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKDIINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL
What are the official names of this protein?
Uncharacterized 9.1 kDa protein in spaS 3'region, SPA-ORF10, ORF-10.
Protein: RL14_BURCM
Sequence: MIQTESRLEVADNTGAREVMCIKVLGGSKRRYAGIGDIIKVTVKEATPRGRVKKGEIYNAVVVRTAKGVRRQDGSLIKFDGNAAVLLNNKLEPIGTRIFGPVTRELRSERFMKIVSLAPEVL
What is the function of this protein?
Binds to 23S rRNA.  Forms part of two intersubunit bridges in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL14 family.
Protein: NU2M_HIPAM
Sequence: MNPFVSVIIYTTIILGTMIVMTSSHWLLTWTGFEMNMLAIIPIMMKSPNPRATEASVKYFMTQATASMLLMLAVIINLLYSGQWTVMKMLNPTASMIMTMALAMKLGLSPFHFWVPEVTQGVPLTAGLILLTWQKLAPLSILYQISPSINPNLILTMSMLSILVGGWGGLNQTQLRKIMAYSSIAHMGWMAAILIYNPTMTILNLTIYLMTTFTMFTMFALNSTTTTLSLSHTWNKTPIITTLMLTILLSMGGLPPLTGFVPKWMIIQEMTKNDSIILPTLMAIMALLNLYFYMRLTYSTTLTMFPSSNNMKMKWQFEASKHKTLLPTMIILSTMLLPLTPMLVVLD
What is the function of this protein?
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor.  Essential for the catalytic activity and assembly of complex I.
What are the official names of this protein?
NADH-ubiquinone oxidoreductase chain 2, NADH dehydrogenase subunit 2.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 2 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: GCSP_BURMA
Sequence: MKLEHPDRLMNRTPLSLAALETHDAFAERHIGPDAASQQAMLDTLGFATRAALIDAVIPASIRRAETLPLGPFAQPKSEAEALAALRALADKNQVFRSYIGQGYYDTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVADLTGLEISNASLLDEATAAAEAMTLLQRVGKPQSNVFYVADDVLPQTLEVIKTRAKPIGIEVKSGPAADAAAANAFGVLLQYPGANGDVRDYRALADAIHAAGGHVVVAADILALTVLMPPGEWGADVAVGNTQRFGVPMGFGGPHAAYMAVRDEFKRQMPGRLVGVTVDAQGKPALRLALQTREQHIRREKATSNVCTAQALLAIMASMYAVYHGPRGLKTIALRVNRIAALLAAGIRHLGYATVNDTFFDTLTIDTGARTAQLHAFAQAKRINLRRAGDTRVGVSVDETTTRADLADLLTIFAQAAGATAPDIDALDAGLLPAPALPPSLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKADAHSHDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPGQFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVGPHLAKFLPNQRSTGYARGEDGIGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAYSREQAAFPVASLVANKYWPPVGRADNAYGDRNLFCSCVPVSDYA
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Glycine dehydrogenase (decarboxylating), Glycine cleavage system P-protein, Glycine decarboxylase, Glycine dehydrogenase (aminomethyl-transferring).
What is the protein family that this protein belongs to?
Belongs to the GcvP family.
Protein: 5054R_ASFWA
Sequence: MFSLQDICRKHLFQLPDAFDEYILQALGLYWEKHGSLQRIRKDAVFVQRNLIISTNEALRIAASEGNERVINLLLSWEGNFHYVIIGALEGNRYDLIHKYGSQIKDYHMILSSIQNANTFEKCHELSNCDMWCLIDNAIKYNMLSILQKHRNFLTEELENQEFFETACEEQKYDIVLWIGQTLLLDEPKFIFDTAFKMVDFSLLTIGYSLLFDNKMDIQDDLTSLLTEHLEKAAAKGQLYFMLETLKHGGDVNFEVLSKAVENDHRKILDYFIRRQQCLSREDIENLLLSAITNCASKKTLNLLLSYLNYSIKNITEKIVQHVIKGGDYTIIILLKKKKINLVEPVLTGFIDQYYSYCFIENFIREFAIRPERLIKMAARKGKLNMIIEFLNEKYVHKDDLGTIFKLLKNLVCTMKHKKGKETLIILIHKIYQDIHLETKEKFKLLKFYVMHDATIQFLSMCKDCFNLAGFKPFVLECLDIAIKKNHPNMIQNIEILSKYE
What is the function of this protein?
Plays a role in virus cell tropism, and may be required for efficient virus replication in macrophages.
What are the official names of this protein?
Protein MGF 505-4R.
What is the protein family that this protein belongs to?
Belongs to the asfivirus MGF 505 family.
Protein: SLEC_CALRH
Sequence: DFNCLPGWSAYDQHCYQAFNEPKTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNIKRPELYVWIGLRDRRKEQQCSSEWSMSASIIYVNWNTGESQMCQGLARWTGFRKWDYSDCQAKNPFVCKFPSEC
What is the function of this protein?
Potent inhibitor of collagen-induced platelet aggregation.  It acts by binding to the integrin alpha2A domain and blocks collagen binding to integrin alpha-2/beta-1 (ITGA2/ITGB1).  The gamma/delta subunits mainly contribute to this activity.
What are the official names of this protein?
Snaclec rhodocetin subunit gamma.
What is the protein family that this protein belongs to?
Belongs to the snaclec family.
What are the subcellular locations of this protein?
Secreted.
Protein: HUTI_DICDI
Sequence: MGFDFKLKISNASQLVVISKGKPFLIGKEMSNIEIIENGTMIIDENGIIFDIGTFKEMEEKYKDKSFEKVLDCTGKSVLPGFVDGHTHPVFSGDRVHEFAMKLAGATYLDVHKAGGGIQFTISHTKNSTEDELYQLLIPRLNRMLKNGTTLIEAKSGYGLETETEMKMLKVLDRASKQFQGVEIVSTYLGGHAIPKGMNASEATDDIINKQIPELKRLKDAGEISPANIDVFLEKGFFEYEDTKRILQAGKDIGLECNFHGDELSYMKSGELAGELGCRAISHLEKVSEDGMKAMAATPTFAVLLPTTAYILRLECPPARRMIELGVPVALGSDFNPNAHCLSMPFVMNLACVLMKMNMNESLVAATLNAAASINKSSTHGSLEVGKFADFVILSADKWEHIIYEMVDPPISHVFKKGNLVFSNNN
What are the official names of this protein?
Probable imidazolonepropionase, Amidohydrolase domain-containing protein 1 homolog.
What is the protein family that this protein belongs to?
Belongs to the metallo-dependent hydrolases superfamily. HutI family.
Protein: GRAS_STAAM
Sequence: MNNLKWVAYFLKSRMNWIFWILFLNLLMLGISLIDYDFPIDSLFYIVSLNLSLTMIFLILTYFKEVKLYKHFDKDKEIEEIKHKDLAETPFQRHTVDYLYRQISAHKEKVVEQQLQLNMHEQTITEFVHDIKTPVTAMKLLIDQEKNQERKQALLYEWSRINSMLDTQLYITRLESQRKDMYFDYVSLKRMVIDEIQLTRHISQVKGIGFDVDFKVDDYVYTDTKWCRMIIRQILSNALKYSENFNIEIGTELNDQHVSLYIKDYGRGISKKDMPRIFERGFTSTANRNETTSSGMGLYLVNSVKDQLGIHLQVTSTVGKGTTVRLIFPLQNEIVERMSEVTNLSF
What is the function of this protein?
Member of the two-component regulatory system GraR/GraS involved in resistance against cationic antimicrobial peptides (CAMPs).  Functions as a sensor protein kinase which phosphorylates GraR through the auxiliary protein GraX.  In turn, GraR up-regulates many genes such as adhesins, exoproteins, transporters, toxins, and proteins involved in cell wall synthesis.  Down-regulates the expression of many genes involved in RNA and amino acid synthesis or glycolysis.
What are the official names of this protein?
Sensor histidine kinase GraS, Glycopeptide resistance-associated protein S.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RSMJ_COXB2
Sequence: MNDTLAITYSTPARLSEAEKLARQMKLPLVSLNSTDYSFLLVFTPAHLELRSTGTKAPGPLYVDFLKGATAHRRLFGGGRSQLIVRAVGLKSHPHPTILDLTAGLGRDAFVLANLGCDVLMIERNPVIALLLRDGLERAQSVEWFKSLKLELIEIDAQIYLSTLKKQFDVIYMDPMYPIRKKSALVKKEMRILRRLVGADDDAPQLLALALKKAKHRVVIKRPRLSNPLPGPAPDVVYEGKSSRFDVYLLKPSS
What is the function of this protein?
Specifically methylates the guanosine in position 1516 of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase J, 16S rRNA m2G1516 methyltransferase, rRNA (guanine-N(2)-)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmJ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GC_MEHVF
Sequence: MVSNMRSTRTALTGWVGIFLVLSLQQTSCAGLPHNVDTHHILTFNPSPISADGVPLSEVPNSPTTELSTTVATKTAVPTTESTSSSEAHRNSSHKIPDIICDREEVFVFLNNTGRILCDLIVDPPSDDEWSNFALDVTFNPIEYHANEKNVEVARVAGLYGVPGSDYAYPRKSELISSIRRDPQGSFWTSPTPRGNKYFIWINKTMHTMGVEVRNVDYKDNGYFQVILRDRFNRPLVEKHIYMRVCQRPASVDVLAPPVLSGENYKASCIVRHFYPPGSVYVSWRRNGNIATPRKDRDGSFWWFESGRGATLVSTITLGNSGLESPPKVSCLVAWRQGDMISTSNATAVPTVYYHPRISLAFKDGSLQDHRSL
What are the official names of this protein?
Envelope glycoprotein C homolog, A antigen, Glycoprotein A.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae glycoprotein C family.
Protein: RUVB_HELPJ
Sequence: MKERIVNLETLDFETSQEVSLRPNLWEDFIGQEKIKSNLQISICAAKKRQESLDHMLFFGPPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQFYSPSELSLIIKKAAAKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLMDLSITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEPFLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time.  Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange.  Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration.  The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration.  Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvB.
What is the protein family that this protein belongs to?
Belongs to the RuvB family.
Protein: RS12_CHESB
Sequence: MPTVNQLIAKPRKAPVKRNKVPAMEANPQKRGVCTRVYTTSPKKPNSAMRKVAKIRLANGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGVLDTQGVKSRKQRRSKYGAKRPK
What is the function of this protein?
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone.  Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together.  The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.
Protein: FLAB_VIBC3
Sequence: MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQEGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGEDGKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSLLG
What is the function of this protein?
Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.  FlaB is not essential for flagellar synthesis and motility.
What are the official names of this protein?
Flagellin B.
What is the protein family that this protein belongs to?
Belongs to the bacterial flagellin family.
What are the subcellular locations of this protein?
Secreted. Bacterial flagellum.
Protein: AAT_METEX
Sequence: MTDFHRIKRLPPYVFEQVNRIKAAARARGADIIDLGMGNPDLDAPRHVIEKLVETAGKPRTDRYSASKGIAGLRRAQAGYYQRRFGVSLNPDT
What are the official names of this protein?
Putative aspartate aminotransferase, AspAT, ORF2, Transaminase A.
What is the protein family that this protein belongs to?
Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UFSP2_XENLA
Sequence: MVVITSACIIFRIRGGLNLSFPLTATDETSAKKALFRAVCDLSSKLLSESLVLNICNSVLYIWPNTGTCTHPTELSDDTPCKDILRFIQVDDERKVSKKKEKKSQDLQQMVNIKLLFERSTSSEAVSPVIHQDISSQQLVNMVLPIDTVVSVSPDEAWGKVRQLLVNGLTHQLSEMEKCLLKYMKGTSFYVAEPNHFLLPDQGLATVIYPAGVADVQLEDCRQALHEQFNLPLDRPYFRRANAFHFPDEPYKDGYIRNPHLQLGTPPLEGATVSLVQGLYSYHHYMQDRMDDNGWGCAYRSLQTICSWFKYQGYTDKPIPTHKEIQQALVDVGDKPASFVGSRQWIGSIEVQLVLDHLLGITSKIMFVSQGTELASRGRELVHHFTSEGTPVMIGGGVLAHTILGVAWSELTGDIRFLILDPHYKGGEDLHVILEKGWCGWKGPEFWDATAYYNLCLPQRPTAI
What is the function of this protein?
Thiol-dependent isopeptidase that recognizes and hydrolyzes the peptide bond at the C-terminal Gly of UFM1, a ubiquitin-like modifier protein bound to a number of target proteins.  Does not hydrolyze SUMO1 or ISG15 ubiquitin-like proteins.
What are the official names of this protein?
Ufm1-specific protease 2, UfSP2.
What is the protein family that this protein belongs to?
Belongs to the peptidase C78 family.
What are the subcellular locations of this protein?
Cytoplasm. Endoplasmic reticulum. Nucleus.
Protein: RPOC2_GRATL
Sequence: MTQDKSIEPFFLNKVVDKSQLRQLIIWAFRNYGIARASNMADTLKDLGFLYATKAGISLSLEDLRIPPAKNNLLKTTIDLINDTDTKYRKGEITAVERFQKVIDTWNSASDTLKKQVIKYFTEKDPLNSIYMMAFSGARANISQVRQLVGMRGLMADPQGQIIDLPISSNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIIREADCNTSKGIVLESMIDNRKTLVSLHQALIGRVLAEDLFNPAGSKLVAKLNTEISPDLANEIISLGISSVLVRSPITCESIKSVCQSCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELAQTVISSSDCQVEYPSNIILSDTRTRHGDHAFLVEKDIKLKLLDFNKKQTSLSLVKGSLLFVKHLEYITSGQVIAEYPISNRLITEKAQKAVLADFSGSIYLMDLSVSNIQSEQQTFKNVIKGGVIWILAGHVFSIPYNTQLIISENDFIDENHLIGKTEFVSRYEGRVRILKKKQDFIQDIVIITSSKTYINIDVLTKFYNGYTNHFLITNQQDKFILKTLPNQTIVDQQLIAELITNIYRTNTGGIIKYLDLSVSDKKVDLNSKKDYYDIVDGGYVLWIGEETHEINKDISLLLVSHGQLIDEGTEIVKNIFTNSSGIVDIIQKEGIVREIIIKPGILYPHSKFYDHKSKSRGFLKPGEIISNDLKTDKLVYWEYFYVKNQSYTLIRPVIVYSIPSKTIQFKYSADSFNSHICSLKLVKRIYFRDGERVKSVSGIDIVKTYLIAELNKDSLNLKCTLQLNLDSNNRSISRMRIVTMDKLSLKDENNIASTKDLYTRTRLLVTNNQYIKSGTVVAQTELFSSLEGQVVSIQKNKSSNPRILLITSLDTKVFSINNNQNIKVNINDLIYAGDEIATNIISYISGQVISIRDNQITVRLGQPYLISEGSFLHVNNQALIQRGENIATLIFERVKTGDIVQGLPRIEEILEARKKSDSFFNPHVVLDSKFRQYVNQGLNLYDATRLSLLILQLYLVKELQLVYQSQGVEIADKHIEVIVRQMTSKVKIENGGDTDHLPGEIIELQKIEMLNKALRLASKEEALYYPILLGITKASLNTESFISAASFQETTKVLTDAAISCKLDWLRGLKENVIIGRLIPAGTGFNIYNNMQLNYQDEKYSYTKNLLSLPQNTKNLNFEDIIVDDRNAHMYSRNNNL
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta'', PEP, Plastid-encoded RNA polymerase subunit beta'', RNA polymerase subunit beta''.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: TRPD_STRZP
Sequence: MKEIIEKLAKFENLSGVEMTDVIERIVTGRVTEAQIASLLLALKMKGETPEERTAIARVMRGHAQHIPTEIHDAMDNCGTGGDKSFSFNISTTAAFVLAGGGIHMAKHGNRSISSKSGSADVLEALGINLDLKPAELGKVFDKTGIVFLFAKNMHPAMKYIMPARLELGIPTIMNLTGPLIHPMALETQLLGISRPELLESTAQVLKNMGRKRAIVVAGPEGLDEAGLNGTTKIALLENGEISLSSFTPEDLGMEGYAMEDIRGGNAQENAEILLSVLKNEASPFLETTVLNAGLGFYANGKIDSIKEGVALARQVIARGKALEKLRLLQEYQK
What is the function of this protein?
Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
What are the official names of this protein?
Anthranilate phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the anthranilate phosphoribosyltransferase family.
Protein: RNH2_STAA8
Sequence: MTLTIKEVTQLINAVNTIEELENHECFLDERKGVQNAIARRRKALEKEQALKEKYVEMTYFENEILKEHPNAIICGIDEVGRGPLAGPVVACATILNSNHNYLGLDDSKKVPVTKRLELNEALKNEVTAFAYGIATAEEIDEFNIYKATQIAMQRAIDGLSVQPTHLLIDAMTLDNALPQVSLIKGDARSVSIAAASIMAKVFRDDYMTQLSKDYPEYGFEKNAGYGTKQHLLAIDDIGIMKEHRKSFEPIKSLL
What is the function of this protein?
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
What are the official names of this protein?
Ribonuclease HII, RNase HII.
What is the protein family that this protein belongs to?
Belongs to the RNase HII family.
What are the subcellular locations of this protein?
Cytoplasm.