PharMolix/UniProtQA huggingface dataset:
Protein: NUSB_STRPD
Sequence: MTNSFQNSRRDLRERAFQALFNIEMGAELLAASQFAYGYDKVTREDAQVLELPIFLLSLVTGVNNHKEELDNLISTHLKKGWSLERLTLTDKTLLRLGLFEIKYFDETPDRVALNEIIEVAKKYSDETSAKFINGLLSQYVSEAPSANKS
What is the function of this protein?
Involved in transcription antitermination.  Required for transcription of ribosomal RNA (rRNA) genes.  Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
What are the official names of this protein?
Transcription antitermination protein NusB, Antitermination factor NusB.
What is the protein family that this protein belongs to?
Belongs to the NusB family.
Protein: ORN_VIBVU
Sequence: MSFSDQNLIWIDLEMTGLDPDVHKIIEIASIVTDSELNILAEGPVLAIHQSEEELAKMDEWCTNTHTGSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPICGNSIGQDRRFLYRHMPELEGYFHYRYIDVSTLKELTRRWNPEVLKGFSKQGTHLALDDIRESIAELKFYRQTIFKI
What is the function of this protein?
3'-to-5' exoribonuclease specific for small oligoribonucleotides.
What are the official names of this protein?
Oligoribonuclease.
What is the protein family that this protein belongs to?
Belongs to the oligoribonuclease family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TATB_BURP0
Sequence: MLDLGLSKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVSREIELDALRTMKTDFEQAARNVENTIHDNLREHERDLNAAWNSAVSPGGSAAADAPDGPSAASGEPSWRTIAAAPAKRRNWRVKKAVTPVWYKRATMRRTQVQSGAARVARHRPASLRRPARFL
What is the function of this protein?
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.  Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides.  TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
What are the official names of this protein?
Sec-independent protein translocase protein TatB.
What is the protein family that this protein belongs to?
Belongs to the TatB family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: YQGF_SALSV
Sequence: MSDTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVTVTLHDERLSTVEARSGLFERGGYRALNKGKVDSASAVIILESYFEQGY
What is the function of this protein?
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
What are the official names of this protein?
Putative pre-16S rRNA nuclease.
What is the protein family that this protein belongs to?
Belongs to the YqgF nuclease family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HEM6_PECCP
Sequence: MSDVNAVKHFLLSLQKDICQQLAAIDGGADFAEDEWQRAEGGGGCSRVLSGGRVFERAGVNFSHVTGKSLPPSASTHRPDLAGRSFQAMGVSLVIHPLSPYIPTSHANVRLFIAEKPGEEPVWWFGGGFDLTPYYGFKEDAVHWHQTAHDLCQPFGDEVYPRYKKWCDDYFFLKHRNEARGIGGLFFDDLNEPDFATSFAFIRAVGNGFLDGYLPIVERRKDLPWGEREREFQLYRRGRYVEFNLIWDRGTLFGLQSGGRTESILMSMPPLARWEYQHQPEPGSPEALLYQDFLPARDWLAESHTHNKEA
What is the function of this protein?
Involved in the heme biosynthesis.  Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.
What are the official names of this protein?
Oxygen-dependent coproporphyrinogen-III oxidase, CPO, Coprogen oxidase, Coproporphyrinogenase.
What is the protein family that this protein belongs to?
Belongs to the aerobic coproporphyrinogen-III oxidase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CHM4B_XENLA
Sequence: MSLIGKLFGTGGKGAKGPSPQEAIQKLRDTEEMLAKKQEFLEKKIEQELVTAKKHGTKNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQEISDAISKPVGFGEDFDEDELMAELEELEQEELDKNLLEVQGPETVPLPNVPAASLPAKPVKKKQEEDDDDMRELENWATA
What is the function of this protein?
Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs.  MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids (By similarity).
What are the official names of this protein?
Charged multivesicular body protein 4b, Chromatin-modifying protein 4b, CHMP4b.
What is the protein family that this protein belongs to?
Belongs to the SNF7 family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol. Late endosome membrane; Peripheral membrane protein. Midbody.
Protein: OTEMO_PSEPU
Sequence: MSNRAKSPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADAAYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDNGFTYSEPTQAAENRWTEEVYADFSRTLLAEANAWWVKTTTKPDGSVVRRTLVHVSGGPEYRKRCEQVAYNNYNGFELA
What is the function of this protein?
Involved in the degradation of (+)-camphor.  Catalyzes the lactonization of 2-oxo-delta(3)-4,5, 5-trimethylcyclopentenylacetyl-CoA (OT-CoA), a key intermediate in the metabolism of camphor.  2-Oxocyclopentyl ethyl acetate is also a good substrate, as is 2-oxocyclohexyl ethyl acetate and methyl-substituted cyclohexanones, but free acid is a poor substrate.
What are the official names of this protein?
2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase, OTEMO, (2,2,3-trimethyl-5-oxocyclopent-3-enyl)acetyl-CoA 1,5-monooxygenase, MO2.
What is the protein family that this protein belongs to?
Belongs to the FAD-binding monooxygenase family.
Protein: Y1040_STAAB
Sequence: MSEIKRLEINYKTDELFENFRAFGNKDLYMVNELNGQMIDASSDSPFYGIFVGDQLGARMALLKKGDVEEIYFPDFEDYILLWKLEVLPKYQNRGYASELIDFAKSFNMPIKAIGRNDSKDFFLHHGFTDVEAKNIEGHDVLLWKP
What are the official names of this protein?
Uncharacterized N-acetyltransferase SAB1040c.
Protein: OPA67_NEIGO
Sequence: ASEGNGRGPYVQADLAYAAERITHDYPEATAQKKGTTISTVSDYFRNIRTHSVHPRVSVGYDFGGWRIAADYARYRKWNNSKYSVSIKKLQNQYNKKTENQENGTFHAASSLGLSAVYDFKLNDKFKPYIGARVAYGHVRHSIDSTKKTTGFLTTAGARGAAPTVSSPYKNTQDAHQESNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRLENTRFKTHEASLGVRYRF
What is the function of this protein?
Implicated in a number of adherence functions.  OPA proteins are implicated in pathogenesis and are subject to phase variation.
What are the official names of this protein?
Opacity protein opA67.
What is the protein family that this protein belongs to?
Belongs to the opacity porin family.
What are the subcellular locations of this protein?
Cell outer membrane.
Protein: CHSY_RAPSA
Sequence: MVGTTSSLDEIRKAQRADGPAGILAIGTANPANHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDVSAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGITFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSLDDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPV
What is the function of this protein?
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.
What are the official names of this protein?
Chalcone synthase, Naringenin-chalcone synthase.
What is the protein family that this protein belongs to?
Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
Protein: PAO3_ARATH
Sequence: MESGGKTNRQLRKAICVSTDEKMKKKRSPSVIVIGGGMAGISAARTLQDASFQVVVLESRDRIGGRVHTDYSFGFPVDLGASWLHGVCKENPLAAVIGRLGLPLYRTSGDNSVLYDHDLESYALFDKAGNQVSQELVTKVGENFEHILEEICKVRDEQDEDMSIAQAFSIVFKRNPELRLEGLAHNVLQWYLCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLSKGLDIRLSHRITKISRRYSGVKVTTEKGDTFVADAAVIALPLGVLKSGMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFLNLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDNLFFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLERYGELEHEMEEEAPASVPLLISRM
What is the function of this protein?
Flavoenzyme involved in polyamine back-conversion (PubMed:18583528, PubMed:20532512, PubMed:21081665).  Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine, spermidine and their acetyl derivatives (PubMed:18583528, PubMed:20532512, PubMed:21081665).  Substrate preference is spermidine > spermine > N(1)-acetylspermidine > N(1)-acetylspermine (PubMed:18583528).  Plays an important role in the regulation of polyamine intracellular concentration (Probable).  Involved in the production of hydrogen peroxide during pollen tube growth (PubMed:20626657).  Hydrogen peroxide triggers the opening of the hyperpolarization-activated calcium permeable channels in pollen, and thus regulates pollen tube growth (PubMed:20626657).
What are the official names of this protein?
Polyamine oxidase 3, AtPAO3.
What is the protein family that this protein belongs to?
Belongs to the flavin monoamine oxidase family.
Protein: ATPF_PROM9
Sequence: MNLTLLATEGFGLNFNLFETNILNWAVVVFGLYKFLPSFLGKMLQKRREGILLELKDAEDRLVNATKALDKAKKDLSSAEEKASQIKADSFKRSESIRMESEKKAIEEMARIKQSAISDESSEASRAISQLRKEAVELAIKKALDSLPNRLDSTTQENLVTQSINNIEVN
What is the function of this protein?
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
What are the official names of this protein?
ATP synthase subunit b, ATP synthase F(0) sector subunit b, ATPase subunit I, F-type ATPase subunit b, F-ATPase subunit b.
What is the protein family that this protein belongs to?
Belongs to the ATPase B chain family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Single-pass membrane protein.
Protein: RL31_YERPA
Sequence: MKQGIHPKYEQVTASCSCGNVIKINSTVGHDLNLDVCGECHPFYTGKQRDVASGGRVDRFNKRFSVPGAKK
What is the function of this protein?
Binds the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L31.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
Protein: ARGC_STRAW
Sequence: MAVRVAVAGASGYAGGEALRLLLAHPEVEIGALTGNSNAGQKLGALQPHLLPLADRVLQETSPDVLAGHDVVFLALPHGQSAAVAEQLGPDVLVVDMGADFRLRNPADWEKFYGSPHAGTWPYGLPELPGGRAALEGSKRIAVPGCYPTAVSLALFPAYAAALAEPEAVIVAASGTSGAGKAAKPHLLGSEVMGSMSPYGVGGVHRHTPEMIQNLGAAAGEPVSVSFTPTLAPMPRGILATCTAKARAGVTAESVRAAYEKAFADEPFVHLLPEGQWPATASVYGSNAVQVQVAYDAAAQRIIAISAIDNLTKGTAGGALQSMNIALGLPEELGLSTIGVAP
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.
What are the official names of this protein?
N-acetyl-gamma-glutamyl-phosphate reductase, AGPR, N-acetyl-glutamate semialdehyde dehydrogenase, NAGSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYE_STRPF
Sequence: MSKPIRVRYAPSPTGLLHIGNARTALFNYLYARRHGGTFIIRIEDTDRKRHVEDGERSQLENLKWLGMDWDESPETHENYRQSERLALYQQYIDQLLAEGKAYKSYVTEEELAAERERQEAAGETPRYINEFIGMSADEKAKYISEREAAGVVPTVRLAVNESGIYKWTDMVKGDIEFEGGNIGGDWVIQKKDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMPEAVFNFIALLGWNPGGEEEIFSREQLIALFDENRLSKSPAAFDQKKMDWMSNEYLKHADFETVYALCKPFLEEAGRLTEKAEKLVELYKPQLKSADEIIPLTDLFFSDFPELTEAEKEVMAGETVSTVLQAFKAKLEAMSDEDFKPENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPNTIYLLGRDKSIEHIKNML
What is the function of this protein?
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
What are the official names of this protein?
Glutamate--tRNA ligase, Glutamyl-tRNA synthetase, GluRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VP4_ROTHQ
Sequence: MASLIYRQLLSNSYVTNISDEVSEIGARKTANVTVNPGPFAQTGYAPVNWGHGELSDSTLVQPTLDGPYQPTTFNLPIDYWMLIAPTQIGRVAEGTNTTNRWFACVLVELNVQNTQREYVLDGQTVQLQVSNDSSTLWKFILFIKLEKNGTYTQYSTLSTSNKLCAWMKREGRVYSYAGVTPNASESYYLTINNDDSNVSSDAEFYLIPQSQTELCTQYINNGLPPIQNTRNVVPVSLTSREIRHSRAQMNEDIVVSKTSLWKEMQYNRDITIRFKFANSIVKSGGLGYKWSEISFKPMNYQYTYTRDGEEITAHTTCSVNGVNDFTYNGGPLPTDFAISRFEVIKENSYVYIDYWDDSQAFRNMVYVRSLAADLNDVVCSGGDYSFALPVGAYPIMSGGAVTLSPAGVTLSTQFTDYVSLNSLRFRFRLAVSEPSFSISRTRLSGIYGLPAANPNNSVEYYEIAGRFSLISLVPTNDDYQTPIANSVTVRQDLERQLGELREEFNSLSQEIALSQLIDLATLPLDMFSMFSGIKSTVEAVKSMTTNIMKKFKTSNLANAISDLTNSMSDAASSISRSASVRSIGSNTTMRISTAIQTGEDLRTMTDASTQISNVSRSLRLREFTTQTDNLSFDDISAAVLKTKLDKSTQISQTTIPDIISESSEKFIPMRTYRVMDNDTGFETGIDGTFYAYRIDTFDEIPFDVEKFNRLITDSPVLSAIIDFKTLKNLNDNYGITKTQAMELLQSNPRTLKEFINSNNPIIRNRIENLIAQCRL
What is the function of this protein?
Forms the head of the spikes and mediates the recognition of specific host cell surface glycans.  It is the viral hemagglutinin and an important target of neutralizing antibodies.  In sialic acid-dependent strains, VP8* binds to host cell sialic acid, most probably a ganglioside, providing the initial contact.  In some other strains, VP8* mediates the attachment to histo-blood group antigens (HBGAs) for viral entry.
What are the official names of this protein?
Outer capsid protein VP4, Hemagglutinin.
What is the protein family that this protein belongs to?
Belongs to the rotavirus VP4 family.
What are the subcellular locations of this protein?
[Outer capsid protein VP4]: Virion. Host rough endoplasmic reticulum. Host cell membrane. Host cytoplasm, host cytoskeleton. Host endoplasmic reticulum-Golgi intermediate compartment. Note=The outer layer contains 180 copies of VP4, grouped as 60 dimers. Immature double-layered particles assembled in the cytoplasm bud across the membrane of the endoplasmic reticulum, acquiring during this process a transient lipid membrane that is modified with the ER resident viral glycoproteins NSP4 and VP7; these enveloped particles also contain VP4. As the particles move towards the interior of the ER cisternae, the transient lipid membrane and the non-structural protein NSP4 are lost, while the virus surface proteins VP4 and VP7 rearrange to form the outermost virus protein layer, yielding mature infectious triple- layered particles. VP4 also seems to associate with lipid rafts of the host cell membrane probably for the exit of the virus from the infected cell by an alternate pathway. SUBCELLULAR LOCATION: [Outer capsid protein VP8*]: Virion. Note=Outer capsid protein. SUBCELLULAR LOCATION: [Outer capsid protein VP5*]: Virion. Note=Outer capsid protein.
Protein: SYS_METMJ
Sequence: MLELKFVRAHPEIVRADLTKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNVISREISQARKAGNDITELLAEAAGLPERIKEVETERETLTEAVRYRLMRLPNILHESVPVGKDDSENVEIRRWGEPEIPAFDLENHGALAVEHGWADFERAAKIAGSGFYFLKGRLALLDMALQRFAMDILVEHGYTPIIPPYMMNRAAYEGVTDLADFENVMYRIDGEDEYLIATSEHPMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPEQSWDLHEELMANAEEVFQRLGLPYRIVSICTGDIGTVAAKKYDLEVWMPREERYREAVSCSNCTAYQAVRLNIKVRNPTEFTEKRYVHTLNSTAIATSRAIRAILENNQNEDGSVTIPKALRPYLYGSETL
What is the function of this protein?
Catalyzes the attachment of serine to tRNA(Ser).  Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
What are the official names of this protein?
Serine--tRNA ligase, Seryl-tRNA synthetase, SerRS, Seryl-tRNA(Ser/Sec) synthetase.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PURA_CLOBK
Sequence: MSAFIVLGAQWGDEGKGKMTDYLAENADVVVRFQGGNNAGHTVVVGEKEYKLHLIPSGILYNDKLNVIGNGVVLDPKALFEEINYLESLGVEITPDRLIISDRAHVIMPYHRVLDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKIITEVFGGEALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVTSSSTIAGGVCIGAGVGPTAITNAVGIAKAYTTRVGKGPFPTELLDSTGDWVREKGHEFGVTTGRARRCGWLDLVILKTSARISGLTSFAVTKIDTLAGLDTLKVCTGYRLNGEIIDYVPASLEDLAKCEPIYEEFEGWDDSIANARCYEDLPENAIKYLKKIEDFTETKVSIVSVGPKRDQTMMISEI
What is the function of this protein?
Plays an important role in the de novo pathway of purine nucleotide biosynthesis.  Catalyzes the first committed step in the biosynthesis of AMP from IMP.
What are the official names of this protein?
Adenylosuccinate synthetase, AMPSase, AdSS, IMP--aspartate ligase.
What is the protein family that this protein belongs to?
Belongs to the adenylosuccinate synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CALM_KLULA
Sequence: MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGSGEINIKQFAALLSK
What is the function of this protein?
Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+).  Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
What are the official names of this protein?
Calmodulin, CaM.
What is the protein family that this protein belongs to?
Belongs to the calmodulin family.
Protein: RL9_SALRD
Sequence: MQIILLNDVDHLGEKGEVHEVADGYGRNYLIPQGLARVATDGAIRQLRDEQQQQARKEAAKKEQVEELKDELEDMQVVFTAKVGEDNRIFGTVTTQQIAVELSNRGFNIDRRDIELDEDIRFVGAYTASIDLGYGIEATLDIQVIPESG
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: KUP_ECO27
Sequence: MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI
What is the function of this protein?
Responsible for the low-affinity transport of potassium into the cell.  Likely operates as a K(+):H(+) symporter.
What are the official names of this protein?
Low affinity potassium transport system protein Kup, Kup system potassium uptake protein.
What is the protein family that this protein belongs to?
Belongs to the HAK/KUP transporter (TC 2.A.72) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: PSBF_TOBAC
Sequence: MTIDRTYPIFTVRWLAIHGLAVPTVFFLGSISAMQFIQR
What is the function of this protein?
This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII), and is essential for PSII function (PubMed:12655396).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Cytochrome b559 subunit beta, PSII reaction center subunit VI.
What is the protein family that this protein belongs to?
Belongs to the PsbE/PsbF family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: HLDE_CAMJJ
Sequence: MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLKNLGADVFALGVVGDDESGKFLQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSAILLENELIALFDEKIKDFKAVVLSDYAKGVLTPKVCKAVIEKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGKNLEKGIKKLKEDFALRYSIITLSEAGIALFDENLKIAPAKALEVYDVTGAGDSVIAVLAFCLANEIEIFKACELANEAAAVVVSKIGSVSVSFDEIKSFKHVDFEKKIKSKEELLALLKQNDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVLVVGLNSDASVKSLKGESRPVNSEFQRACMLAAFYFVDFVVVFDEDTPLELISFLKPDILVKGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK
What is the function of this protein?
Catalyzes the ADP transfer from ATP to D-glycero-beta-D-manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
What are the official names of this protein?
Bifunctional protein HldE.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the cytidylyltransferase family.
Protein: NFUA_STRM5
Sequence: MIQISDTAQTHFRKLIEREGAPGMGVRLSAVDPGTPRADARLEFAEPSDLLGDEWAVDCDGFTLYVDAASVGWLDGAEIDIVAGTAGAQQLTIKAPRIKGEAPGDAASLVERVHWVVENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMADVTLKQGIEKTLMGRVPGVTAVRDATDHDSGHAPYIPRGNAA
What is the function of this protein?
Involved in iron-sulfur cluster biogenesis.  Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins.  Could also act as a scaffold/chaperone for damaged Fe/S proteins.
What are the official names of this protein?
Fe/S biogenesis protein NfuA.
What is the protein family that this protein belongs to?
Belongs to the NfuA family.
Protein: RL5_CHLAD
Sequence: MTVRLREKYYKEVVPALMEEFKFKSIMQVPRLVKIVVNVGVGEAVQNAKAIEAAVNDVAAITGQKPVVTRAKKSVASFKLRAGMPIGVMVTLRGDRMYDFLDRLCSLALPRIRDFRGVSRSSFDGRGNYSIGLKEQIVFPDIDYDKIDKIRGLEVAIVTSAPNDEQAYSLLKRLGMPFRD
What is the function of this protein?
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.  In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement.  Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
What are the official names of this protein?
50S ribosomal protein L5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
Protein: SYC_BORGP
Sequence: MILKLYNTRTKDFSELANFSDVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISKFFTEAFFKDCKKLNVVYPDKVLIASKHIPNMIEVIKILEEKKFTYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMAFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLGGVDHIGVHHINEIAIVECFLNKKWCDIFVHGEFLIMDYNKMSKSHGNFITVKGLEEQNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDPADLNMLNKDLKNFGFSIEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLKLAFIFDEIISLNLREEILKKSENHNIVIDENMKILLEERRIAKCEKNFKRADEIRDFFAKKGFVLIDTKEGTKVKRG
What are the official names of this protein?
Cysteine--tRNA ligase, Cysteinyl-tRNA synthetase, CysRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MIF_BOVIN
Sequence: MPMFVVNTNVPRASVPDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGWNGSTFA
What is the function of this protein?
Pro-inflammatory cytokine involved in the innate immune response to bacterial pathogens.  The expression of MIF at sites of inflammation suggests a role as mediator in regulating the function of macrophages in host defense.  Counteracts the anti-inflammatory activity of glucocorticoids.  Has phenylpyruvate tautomerase and dopachrome tautomerase activity (in vitro), but the physiological substrate is not known.  It is not clear whether the tautomerase activity has any physiological relevance, and whether it is important for cytokine activity.
What are the official names of this protein?
Macrophage migration inhibitory factor, MIF, L-dopachrome isomerase, L-dopachrome tautomerase, Phenylpyruvate tautomerase, p12A.
What is the protein family that this protein belongs to?
Belongs to the MIF family.
What are the subcellular locations of this protein?
Secreted. Cytoplasm. Note=Does not have a cleavable signal sequence and is secreted via a specialized, non- classical pathway. Secreted by macrophages upon stimulation by bacterial lipopolysaccharide (LPS), or by M.tuberculosis antigens.