PharMolix/UniProtQA huggingface dataset:
Protein: PNP_ACIET
Sequence: MSIFNKVTKSFQWGDKTVVMETGEIARQASGAVLVNIDDTVVLATVVGSKQAKPGQDFFPLTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNEVHVVIHTISLNPEVDADIAAMIAVSAALSVSGIPFNGPIGAARVGYVNGEYVLNPGQTARKSSQLDLVVAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGKVAINAIHELVRDAGKPVWDWQPPAKDETFIAKVTALAEDKLRAAYQIRSKQARTQALREASASVLESLKGEGVEFDAVKVEALLFDIEAKIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVVSTLGTERDAQRIDALAGEFEDRFIFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVACLPSKDEFPYTIRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEDNRFAVLTDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQEAMGEAKTEISSFAPKLYTMKINPEKIRDVIGKGGATIRALTDETGCQINIEEDGTITIAATEAAKADEAKRRIEEITAEVEVGKVYEGPVTKILDFGALINLLPGKDGLLHISQIAHERVEKVGDYLQEGQVVKVKVLETDDKGRVKLSMKALADRPAGDSGRPAPAERGERRERRDGGASEQQQQ
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1428_XYLFM
Sequence: MSMPTMTLVNQLLIALPSMPDPHFARGVALICQHDSNGSMGVVLNRPSEYTLGEVLFQMGIETASETLREQVVLAGGPVHPDRGFVIYHSEHVWGPSLLIGDGLYLTTSRDVLAAMAEGSGPSRALVALGCAGWAAGQLELELVENNWLMVPADASLLFDTALEQRWQRAAGRIGVDLFRLTDYTGHA
What are the official names of this protein?
UPF0301 protein Xfasm12_1428.
What is the protein family that this protein belongs to?
Belongs to the UPF0301 (AlgH) family.
Protein: AROK_XANAC
Sequence: MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAETLQALLEQDNKLISTGGGAVLDPRNRERICARGFVVYLHVSVPAQLTRLARDRNRPLLQRADREQVLHAMAAHRTPLYHQVADLSLETDHLSPAEATAQLVLRLAAQWRMSSNPA
What is the function of this protein?
Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
What are the official names of this protein?
Shikimate kinase, SK.
What is the protein family that this protein belongs to?
Belongs to the shikimate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GAG_SIVCZ
Sequence: MGARASVLTGGKLDRWEKVRLRPGGRKRYMMKHLVWASRELERFACDPGLMESKEGCTKLLQQLEPALKTGSEGLRSLFNTLAVLWCIHSDITVEDTQKALEQLKRHHGEQQSKTESNSGSREGGASQGASASAGISGNYPLVQNAQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGALPQDVNTMLNAVGGHQGAMQVLKEVINEEAAEWDRLHPTHAGPIAPGQLREPRGSDIAGTTSTLQEQIGWTTANPPIPVGDVYRRWVILGLNKVVRMYCPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTDTLLVQNANPDCKQILKALGPGATLEEMMTACQGVGGPSHKARVLAEAMSMVQNQGRADVFFQKGQGAGPKRKIKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDCTGRQVNFLGKGWPSRSGRPGNFVQNRTEPTAPPIESYGYQEEEKSQEKKEGESSLYPPTSLKSLFGSDPSSQ
What is the function of this protein?
p6-gag plays a role in budding of the assembled particle by interacting with the host class E VPS proteins TSG101 and PDCD6IP/AIP1.
What are the official names of this protein?
Gag polyprotein, Pr55Gag.
What is the protein family that this protein belongs to?
Belongs to the primate lentivirus group gag polyprotein family.
What are the subcellular locations of this protein?
[Matrix protein p17]: Virion. Host nucleus. Host cytoplasm. Host cell membrane; Lipid-anchor. Note=Following virus entry, the nuclear localization signal (NLS) of the matrix protein participates with Vpr to the nuclear localization of the viral genome. During virus production, the nuclear export activity of the matrix protein counteracts the NLS to maintain the Gag and Gag-Pol polyproteins in the cytoplasm, thereby directing unspliced RNA to the plasma membrane (By similarity). SUBCELLULAR LOCATION: [Capsid protein p24]: Virion. SUBCELLULAR LOCATION: [Nucleocapsid protein p7]: Virion.
Protein: MBTM_MYCPA
Sequence: MSELAAALTAAMRTGGSDLVVFDRESAAWRRHRWPEVHGLAEGIAAWLLDRDRPAALGLVGEPTLEFVAAIVGAWLAGAGVSILPGPVRGAEGRRWADTTLTRFAGIGVRTVLSHGSHLDALQALDPSRPDEMVVEDLAVAANTGRRCPEPPAPHANPAILQGTAGSTGTPKTAALSPDAVLANLRGLNARLGVTPADVGCSWLPLYHDMGLSFLLASALGGMSLWLAPTSAFTASPFRWLAWLSESRATITAAPNFAYNLVGKYARRVSGVDLGALRVAINGGEPVDCAGFERFTTAMAPFGFDAGAATPSYGLAEATCAVSVPAPGTGLRFADVSDETGTRRHAVLGAPIPGTEIRISPRHDAPDGIGEIEIRGASMMDGYLGHAPIDHQNWFPTGDLGFFSDDGLVVCGRAKELITLAGRNIFPTEIETVAAQVPGVREGAVVALGTGENSARPGLIIAAEFAGRDRAGARAEVIQRVASVCGVVPSDVIFMAPGSLPRTSSGKLRRLDVRRSLEAVD
What is the function of this protein?
Activates lipidic moieties required for mycobactin biosynthesis.  Converts medium- to long-chain aliphatic fatty acids into acyl adenylate, which is further transferred on to the phosphopantetheine arm of the carrier protein MbtL.
What are the official names of this protein?
Medium/long-chain-fatty-acid--[acyl-carrier-protein] ligase MbtM, Fatty acyl-[acyl-carrier-protein] synthetase, Fatty acyl-ACP synthetase, Mycobactin synthetase protein M.
What is the protein family that this protein belongs to?
Belongs to the ATP-dependent AMP-binding enzyme family.
Protein: NUOCD_ECO55
Sequence: MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit C/D, NADH dehydrogenase I subunit C/D, NDH-1 subunit C/D.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the complex I 49 kDa subunit family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: PPI1_STAAW
Sequence: MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
What is the function of this protein?
PPIases accelerate the folding of proteins.  It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
What are the official names of this protein?
Putative peptidyl-prolyl cis-trans isomerase, PPIase, Rotamase.
What is the protein family that this protein belongs to?
Belongs to the cyclophilin-type PPIase family.
Protein: LASP1_DROME
Sequence: MNKTCARCQKVVYPIEELKCLDKTWHKTCFKCTECGMTLNMKTYKGYNKMPYCEAHIPKAKATAIADTPELKRIAENTKIQSNVKYHADFEKAKGKFTQVADDPETLRIKQNTKHISNVAYHGDLEKKAAMEKQRGSAEVSDSSNESEYFSEQLAAEQFSQYAPTASPIPPAATTLHQQQQQLQHQQQQQYQQHQQQLQQQQHQHQHYLQQQQQTLPPPPIQHQQYNTAAITPTYQQLQQQQQQQQQQRAQQQQLHDPYAHYQQPQALRQQQQQQQQQQQQLLQQQAIKQASHLYPTATSQQQQMPPPQSPANPQQQALNSYNEMRSAILQNSHHPSGNSVDQYDQPQQQQHQPQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHHSNINNNGHGSQNQMLPPQMRRSAASVVAYDGNSKQQVAAGPGAAQNHLQQLYASPNYAAVTPSENSINVKQHASNGHMPNQQQQHVAGGSNIGKIADYDPLTDGPRVVPNAGRSSTTLVYSSEPRGNQGGNSVYPKRIGSVSDIDPANGIYGSLTAAEQAHQQQKHQQYYQQVQMMQQQEHPPQQQQMRQQPSYSSLQEKQSRQSTAMRVYRAIYDYEAQDVDEVSFREGDVIFEVESIDSGWMTGRVERTGKTGMLPANYVEQAVI
What are the official names of this protein?
LIM and SH3 domain protein Lasp.
Protein: YUAC_ECOLI
Sequence: MMIIFRYLIIIILSVYMTGCTNNNLKKEDIPEDMFAIIYGSDSIKKYEHGQMELTKNINSGCIEALVFLSEEDPEKYSDYINDYHKIAEGYRFLDDNRTFMNKDSIELLVRGLNVKKDVLCSRVKFESFQHLKNKFQ
What are the official names of this protein?
Uncharacterized protein YuaC.
Protein: NUSB_SYNP2
Sequence: MPARKQPRSVAREIALLSLSQIKGKPDKLEAVELDELMLAAVRTLSSEIHDILEDAASEVSRAEEQLLRSETLAVNVKSARTMAADALELTRAAINRLGHVVELPEFLQLTRQHEVRNFALEILTTLRRRNDQIKEVIDGSLVDWQYHRLPRLDRDILRIAVAEILFLETPYKVAINEAVELAKRYSDEDGHRFINGVLRRVSDRLRAEDSLK
What is the function of this protein?
Involved in transcription antitermination.  Required for transcription of ribosomal RNA (rRNA) genes.  Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
What are the official names of this protein?
Transcription antitermination protein NusB, Antitermination factor NusB.
What is the protein family that this protein belongs to?
Belongs to the NusB family.
Protein: SYA_ALKOO
Sequence: MKKLGVNEIRKEFLEFFRSKEHIIHPSAPLVPQKDKSLLLINSGMAPLKPYFAGLEEPPGKRMATCQKCIRTGDIENVGRTARHATFFEMLGNFSFGDYFKKESLTWGWEFVTKNLELPVDKLWATVYVDDDEAFEIWNKQIGLPEERIVRLGKADNFWEIGLGPCGPCSEIYFDRGEDYGCGCEECKPGCECDRYVEFWNHVFTQFDRDEEGNYHPLPNPNIDTGMGLERMACIMQGVDSIFDIDTMQDILNSVCKITSSEYKKDERTDVSIRIITDHVRSISLMIGDGILPSNEGRGYVLRRLLRRAARHGKLLGVNRAFLYELVDRVADNYGETYVELVDNKDYIKRVIKVEEERFMETIDQGMDILNQYIEELVTLKETVLSGVNAFKLYDTYGFPFDLTKEILEEKGLSLDETGFESEMEKQRQRARDARIGADTEGWKEDIFSGLDKEIQTAFKGYTNFEVEGKVLAIVSNDTVVEQCDKGKEATVILDETAFYGEGGGQVGDIGTLYNEAVRLSVLDTKKGPHNQVHHVVRVEEGTIKIGDEVKAKVDMVTRMSTARNHTATHLLHKALRDIVGEHVHQAGSLVTPDRLRFDFTHFEGLTKDQITQIEEKVNQQILMALDVRTFETSIEDAKKIGAQALFGEKYGDVVRVVKVGEYSTELCGGTHVTNSGEIGMFIMLSEAGVAAGVRRIEAITGMEAYKYVQKNQKTIQEIADTLKTQVQNVVERVADLVHETKEKDREINKLKSQLASNSTGDILDKATVVGGINVVVEVLENQEMDDLRKIGDVLKEKIGSGVIVLGSSNQDKVNFVAMATKDAVSKGVHAGNLVKEAAKIAGGGGGGRPDMAQAGGKNPQKIQEALDTVKEILVNQLNQ
What is the function of this protein?
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala).  Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
What are the official names of this protein?
Alanine--tRNA ligase, Alanyl-tRNA synthetase, AlaRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SIGIR_MOUSE
Sequence: MAGVCDMAPNFLSPSEDQALGLALGREVALNCTAWVFSRPQCPQPSVQWLKDGLALGNGSHFSLHEDFWVSANFSEIVSSVLVLNLTNAEDYGTFTCSVWNVSSHSFTLWRAGPAGHVAAVLASLLVLVVLLLVALLYVKCRLNMLLWYQDTYGEVEMNDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRLIVVLSDAFLSRPWCSQSFREGLCRLLELTRRPIFITFEGQRREPIHPALRLLRQHRHLVTLVLWKPGSVTPSSDFWKELQLALPRKVQYRPVEGDPQTRLQDDKDPMLIVRGRAAQGRGMESELDPDPEGDLGVRGPVFGEPPTPLQETRICIGESHGSEMDVSDLGSRNYSARTDFYCLVSEDDV
What is the function of this protein?
Acts as a negative regulator of the Toll-like and IL-1R receptor signaling pathways.  Attenuates the recruitment of receptor-proximal signaling components to the TLR4 receptor, probably through an TIR-TIR domain interaction with TLR4.  Through its extracellular domain interferes with the heterodimerization of Il1R1 and IL1RAP (By similarity).
What are the official names of this protein?
Single Ig IL-1-related receptor, Single Ig IL-1R-related molecule, Single immunoglobulin domain-containing IL1R-related protein, Toll/interleukin-1 receptor 8, TIR8.
What is the protein family that this protein belongs to?
Belongs to the interleukin-1 receptor family.
What are the subcellular locations of this protein?
Membrane; Single-pass type III membrane protein.
Protein: Y2264_VIBCH
Sequence: MFPHLVGLGINEPTQIERYSLRQEAHKDVLKIYFKKQKGELFAKSVKFKYPRQIKNVLVDSGSHQYKEVTEINRNLTLVIDELNKITKPEVMGEVDVKQKILNDLRHLEKVVASKIAEIEADLQKLN
What are the official names of this protein?
UPF0325 protein VC_2264.
What is the protein family that this protein belongs to?
Belongs to the UPF0325 family.
Protein: PSAM_ANTAG
Sequence: MTSISDGQIVVALISAFIIVILASRLGKELYQ
What are the official names of this protein?
Photosystem I reaction center subunit XII, PSI-M.
What is the protein family that this protein belongs to?
Belongs to the PsaM family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: Y3631_SYNFM
Sequence: MEVKLLNIGFGNTVIANRVIAIVSPASAPMKRLKEDARQANKLIDATMGRRTRAIIVTDSDHIILSGVQAETIAQRLLTEGGVRDVNLLKQAKD
What are the official names of this protein?
Putative regulatory protein Sfum_3631.
What is the protein family that this protein belongs to?
Belongs to the RemA family.
Protein: MOG1_HUMAN
Sequence: MEPTRDCPLFGGAFSAILPMGAIDVSDLRPVPDNQEVFCHPVTDQSLIVELLELQAHVRGEAAARYHFEDVGGVQGARAVHVESVQPLSLENLALRGRCQEAWVLSGKQQIAKENQQVAKDVTLHQALLRLPQYQTDLLLTFNQPPPDNRSSLGPENLSPAPWSLGDFEQLVTSLTLHDPNIFGPQ
What is the function of this protein?
May regulate the intracellular trafficking of RAN (PubMed:11290418).  Promotes guanine nucleotide release from RAN and inhibits binding of new GTP by preventing the binding of the RAN guanine nucleotide exchange factor RCC1 (PubMed:29040603).  Regulates the levels of GTP-bound RAN in the nucleus, and thereby plays a role in the regulation of RAN-dependent mitotic spindle dynamics (PubMed:29040603).  Enhances the expression of SCN5A at the cell membrane in cardiomyocytes (PubMed:18184654, PubMed:23420830, PubMed:21621375).
What are the official names of this protein?
Ran guanine nucleotide release factor, RanGNRF, Ran-binding protein MOG1.
What is the protein family that this protein belongs to?
Belongs to the MOG1 family.
Protein: E4OR1_ADE09
Sequence: MAESLYAFIDSPGGIAPVQEGTSNRYTFFCPESFHIPPHGVVLLHLKVSVLVPTGYQGRFMALNDYHARDILTQSDVIFAGRRQELTVLLFNHTDRFLYVRKGHPVGTLLLERVIFPSVKIATLV
What is the function of this protein?
Plays a key role in virus oncogenecity in animals.  Binds and sequesters human MUPP1/MPDZ protein in the cytoplasm, preventing it from playing a role in cellular proliferation regulation.  Induces cell transformation, probably by inactivating MPDZ protein.
What are the official names of this protein?
E4-ORF1, Early E4 14.0 kDa protein, ORF1, Probable dUTPase E4 ORF1.
What is the protein family that this protein belongs to?
Belongs to the dUTPase family.
What are the subcellular locations of this protein?
Host cytoplasm.
Protein: YAEH_SALSV
Sequence: MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDRGEFFAKSVKFKYPRQRKTVVADGIGQGYKEVQEISPNLRYVIDELDQICQRDRSELDLKRKILDDLRHLESVVANKISEIEADLDKLTRK
What are the official names of this protein?
UPF0325 protein YaeH.
What is the protein family that this protein belongs to?
Belongs to the UPF0325 family.
Protein: DDL_SHESR
Sequence: MSKINLLLLCGGGSAEHDISLLSANYFETSLAKSEQVNVLRVVLDKFGQYQTAAGDDCELTNNREIRFRDETKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNKITAKMWFSALGIPNTPYIFLNQYDDEAIAQTQAALENWGSIFVKAASQGSSVGCYKVDDSSKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYQGEVVATLPGEIICDSNTFYTFDEKYAKSSKARTDVVAQNVPADISDQIRAYAIKAFKGMKLRHLSRIDFFLTQDNEILLNEINTFPGSTPISMFPKMLQNHGHDFTEYLSLVIKGQLAAK
What is the function of this protein?
Cell wall formation.
What are the official names of this protein?
D-alanine--D-alanine ligase, D-Ala-D-Ala ligase, D-alanylalanine synthetase.
What is the protein family that this protein belongs to?
Belongs to the D-alanine--D-alanine ligase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CRBN_RAT
Sequence: MAGEGDHQDAAHNMGNHLPLLPADSEDEDDEIEMEVEDQDSKEARKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPEVMMILIPGQTLPLQLSHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQEFGIEVVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPISWEDQYSCKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKEDSLPANPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPETEDEISPDKVILCL
What is the function of this protein?
Substrate recognition component of a DCX (DDB1-CUL4-X-box) E3 protein ligase complex that mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as MEIS2 or ILF2.  Normal degradation of key regulatory proteins is required for normal limb outgrowth and expression of the fibroblast growth factor FGF8.  Maintains presynaptic glutamate release and consequently cognitive functions, such as memory and learning, by negatively regulating large-conductance calcium-activated potassium (BK) channels in excitatory neurons.  Likely to function by regulating the assembly and neuronal surface expression of BK channels via its interaction with KCNT1 (By similarity).  May also be involved in regulating anxiety-like behaviors via a BK channel-independent mechanism (By similarity).
What are the official names of this protein?
Protein cereblon.
What is the protein family that this protein belongs to?
Belongs to the CRBN family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Membrane; Peripheral membrane protein.
Protein: TAF8_YEAST
Sequence: MTSKTSESGTGTQSTIVQLRNLPDLTEISHLEIDAPVVEILKKTVLFQLNSLNICISNFALDELVNLVTVQMDGMFRNLHNLTLLQRRSQASQADLKLLLREFNLDAPSLYQQFQASEFIKSKHSTEYEKLMSWSSLAALPHNEEDEEDELNNIEEQQNEINVLLPPSNPLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHISSASNTPQPPGLDDEDAIEQQLEIWGNALEERKPTITEKSFNENNIEQYAKYRVELARERVTKFEVNQLKRTKNPFLKISETLYLPESPHQSHKTIQKTIELQFRKSMTLFMHNLPKVQKLKKEKIRMAKEERAKSLKRRQEELISQRTKREQDEGHDLELLLNNEHARDAADDTTTPNALNNSTIVINTNAEDEDDDINLFGILGSSEDENEMSSMPAENLVAESEPPTMTAQDTTNTTPVAHNTTNIDATTSHSPHSTPNENAPTSPPADIATDHDITM
What is the function of this protein?
Functions as a component of the DNA-binding general transcription factor complex TFIID.  Binding of TFIID to a promoter (with or without TATA element) is the initial step in pre-initiation complex (PIC) formation.  TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modification (histone acetylation by TAF1), facilitation of DNA opening and initiation of transcription.
What are the official names of this protein?
Transcription initiation factor TFIID subunit 8, TAFII-65, TBP-associated factor 65 kDa, TBP-associated factor 8.
What is the protein family that this protein belongs to?
Belongs to the TAF8 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PSBZ_TRICV
Sequence: MITALVALLVFISLGLVITVPVALATPGEWEASKSTFTRAFQAWVGLVIVIAAADGISSAI
What is the function of this protein?
Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.
What are the official names of this protein?
Photosystem II reaction center protein Z, PSII-Z.
What is the protein family that this protein belongs to?
Belongs to the PsbZ family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein. Note=Associated with the photosystem II complex.
Protein: TRUA_BRUMB
Sequence: MPRYKLTVEYDGTPYVGWQRQENGHAVQGAIEQAFKKFCGEDLTLSAAGRTDAGVHATAQVAHVDLAKDWGAGKVRDAVNAHLVMADERISILNVEKTTDTFDARFSARARHYLYRIHNRRAPLAVDYQRAWWVQKQLDADAMHEAAQRLLGEHDFTTFRATQCQAKSPVKTLDRLDVTRNGDMVEMRVSARSFLHNQVRSFAGSLMEVGVGRWTADDLQAALEARDRKACGQVAPPYGLYLVGVDYAFPF
What is the function of this protein?
Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase A, tRNA pseudouridine(38-40) synthase, tRNA pseudouridylate synthase I, tRNA-uridine isomerase I.
What is the protein family that this protein belongs to?
Belongs to the tRNA pseudouridine synthase TruA family.
Protein: HBS1L_BOVIN
Sequence: MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYEDLKEFSSSFVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVVLEQDKVQNLKVRSEGAISTGKIAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVPRVTAEENGHSFHTPQKGHSSEDTSLVSSDALESASKSALPSHTIQASEEQSSTPTPVKKSGKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIKD
What is the function of this protein?
Cotranslational quality control factor involved in the No-Go Decay (NGD) pathway.  In the presence of ABCE1 and PELO, is required for 48S complex formation from 80S ribosomes and dissociation of vacant 80S ribosomes.  Together with PELO and in presence of ABCE1, recognizes stalled ribosomes and promotes dissociation of elongation complexes assembled on non-stop mRNAs; this triggers endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and to degrade damaged mRNAs as part of the No-Go Decay (NGD) pathway.
What are the official names of this protein?
HBS1-like protein.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family.
Protein: DEOB_HELPH
Sequence: MQKRVVILLLDSFGIGASEDAKDFGDLGANTLGNIAKACFNNLADSNDRKGALKLPYLESLGLGLSALKATNELPLGFESKPNLIGAYAYAKELSSAKDTISGHWEMMGAPVLFEWGYFKDKNNSFPKEILDEIMRKTKIKGYLGNCHASGTEIIKDLGEKHLETLYPIFYTSADSVFQIAVHEEKFGLDNLYALCEEAFQILEPLKIARVIARPFIGANREDFKRTANRKDYAIKPHKKLLFETFIEEKQGEVISIGKIADIYAHVGITQKFKAGSLMELCDVTLEQIKNAKNNSLIFTNFVHFDSDYGHRRDISGYANALEYFDARLKEILDNLKENDLLILCADHGCDPSFKGTDHTREYIPVLFYHKDLQPAFLGKSESFADIGQSIAYFLGLSPLDYGKNLLNFKGQP
What is the function of this protein?
Phosphotransfer between the C1 and C5 carbon atoms of pentose.
What are the official names of this protein?
Phosphopentomutase, Phosphodeoxyribomutase.
What is the protein family that this protein belongs to?
Belongs to the phosphopentomutase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SERK1_ARATH
Sequence: MESSYVVFILLSLILLPNHSLWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGPVTSHPCPGSPPFSPPPPFIQPPPVSTPSGYGITGAIAGGVAAGAALLFAAPAIAFAWWRRRKPLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEILREEIDLSPNPNSDWILDSTYNLHAVELSGPR
What is the function of this protein?
Dual specificity kinase acting on both serine/threonine- and tyrosine-containing substrates.  Phosphorylates BRI1 on 'Ser-887' and CDC48 on at least one threonine residue and on 'Ser-41'.  Confers embryogenic competence.  Acts redundantly with SERK2 as a control point for sporophytic development controlling male gametophyte production.  Involved in the brassinolide signaling pathway.  Probably required during small peptide (e. g.  RGF1) signaling (Probable).  Involved in the perception of phytosulfokine and subsequent signal transduction (PubMed:26308901).  Acts as a RLK5 coreceptor and promotes high-affinity IDA sensing, thus being a positive regulator of floral abscission (PubMed:27058169).
What are the official names of this protein?
Somatic embryogenesis receptor kinase 1, AtSERK1, Somatic embryogenesis receptor-like kinase 1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type I membrane protein. Endoplasmic reticulum membrane; Single-pass type I membrane protein.
Protein: PSB_METMJ
Sequence: MLDTSQEIMKGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLVRILQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEGPSVYSVDAMGGATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSAMRRDSASGEDIMVVVITKDKYEEHIESGLQRPSAARPTL
What is the function of this protein?
Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
What are the official names of this protein?
Proteasome subunit beta, 20S proteasome beta subunit, Proteasome core protein PsmB.
What is the protein family that this protein belongs to?
Belongs to the peptidase T1B family.
What are the subcellular locations of this protein?
Cytoplasm.