PharMolix/UniProtQA huggingface dataset:
Protein: VATL2_CAEBR
Sequence: MSYDLETAEHAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALILGTS
What is the function of this protein?
Proton-conducting pore forming subunit of the V0 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons.  V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment (By similarity).  Involved in necrotic cell death.  Required along with other vacuolar ATPase components for the removal of protein aggregates which form in immature oocytes in the distal gonad.  This removal occurs as the oocytes mature and move to the proximal gonad, is triggered by the introduction of sperm through mating and occurs before fertilization.  The introduction of sperm triggers V-ATPase accumulation in proximal oocytes and induces lysosomal acidification which leads to engulfing of protein aggregates by lysosomes and subsequent clearance of the aggregates.  Lysosomal acidification also leads to changes in mitochondrial morphology and function.  Mitochondria in distal immature oocytes are fragmented, produce high levels of reactive oxygen species (ROS) and have high membrane potential, indicative of metabolic inactivity.  In contrast, mitochondria in proximal mature oocytes are tubular with lower ROS levels and membrane potential, indicative of an active metabolic state required for aggregate mobilization before clearance (By similarity).
What are the official names of this protein?
V-type proton ATPase 16 kDa proteolipid subunit c 2, V-ATPase 16 kDa proteolipid subunit c 2, Vacuolar proton pump 16 kDa proteolipid subunit c 2.
What is the protein family that this protein belongs to?
Belongs to the V-ATPase proteolipid subunit family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: RR7_HELSJ
Sequence: MKNLIKNKIKLSTYNITLIEHFIRFLIKGWKKKKAINLLSLSLNYIALTINKDPISTLEMAVRYTIPVYLEVTPSIITNENKTLWHKRFICKSSKVRTFQAIKWIIKAAKEKKDKSLYIHLAKEIVDASRNSGKAVKYKEQMENKLKLAQLHM
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S7, plastid.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
What are the subcellular locations of this protein?
Plastid.
Protein: PETG_BUXMI
Sequence: MIEVFLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.  PetG is required for either the stability or assembly of the cytochrome b6-f complex.
What are the official names of this protein?
Cytochrome b6-f complex subunit 5, Cytochrome b6-f complex subunit PetG, Cytochrome b6-f complex subunit V.
What is the protein family that this protein belongs to?
Belongs to the PetG family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: THG1_ASHGO
Sequence: MAKSRFEYVREYEVHDTLLPETYIVVRIDGKHFHEFSQHYSFEKPNDERALKLMNASAKNVVMAYSGDIILAFGESDEYSFILRKDSTLFRRRRDKLSTLFVSLFTAQYVALWPKFFPEQPLSHKRLPFFDSRCVCYPNTTVVKDYLCWRYVDTHINNLYNTVFWNLVLKCNLTPREAEQRLSGTLSSDKQEILFSECGVNYNNESEMFKKGSLINRKGEIMHIDVVKQIDELFAGF
What is the function of this protein?
Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
What are the official names of this protein?
tRNA(His) guanylyltransferase, tRNA-histidine guanylyltransferase.
What is the protein family that this protein belongs to?
Belongs to the tRNA(His) guanylyltransferase family.
Protein: CBIA_GLOVI
Sequence: MAIIIAAPASGTGKTTITLALLAYLKAHALRVRSFKVGPDYIDPMFHAAVTGQGCVNLDLFLTDEPFVRATYHHHCRGQQAAVIEGVMGLFDGRAGQGDFASTAHVARLLRLPVILVIDGSGAGFSVAATLYGFRRFDPRVRIAGVILNRVGSERHAQILSEAVRSQGLELLGTVYKDETIALPHRHLGLVPVEELSDFRRTQQQLAALAERSFDWQKLLPLVAIQPTAPAPARWEAEPLPPVRIAVARDRAFSFYYQDNLELLAALGAQLETFSPLAGEWPDCRGYLLGGGFPELCAGELSAKTRFWEGLRGAVARGVPLYAECGGLMVLGEALRTPEGRSHPMAGILEASCWMGKRTVLGYRVATALHSSCAVEAGRQLRGHLFHRSRMEPQPGAPLWQLDDDEQEGWVRGNLHASYLHLHWGTQAWAARRFVRRCLAVAFEGKSTPARF
What is the function of this protein?
Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source.
What are the official names of this protein?
Cobyrinate a,c-diamide synthase, Cobyrinic acid a,c-diamide synthetase.
What is the protein family that this protein belongs to?
Belongs to the CobB/CbiA family.
Protein: RIMM_ECODH
Sequence: MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NADK_NITMU
Sequence: MSSSFQTIALIGKHKNPGIVTPLSSLARYLQSRNLTVLLDNLTAASMDEDSYPAVAMEEIGSRADLAIVLGGDGTMLNIARKLAPFNVPLVGINQGRLGFLTDLSIVTMQQTLGAILEGRYITEQRMLLYAEVARSNVTTFGGLALNDVAVNRGIGGNMIEFEVRINDEYVCLLRSDGLIVATPTGSTAYALSAGGPILHPSLDLVALVPVSPHTLSNRPIVVGPDAAVEILMQRTAVARVHFDSHSHFDLEENDKVMVRRSPHRVTLLHPSDHSYYRMLREKLGWSGLPRNPT
What is the function of this protein?
Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP.  Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
What are the official names of this protein?
NAD kinase, ATP-dependent NAD kinase.
What is the protein family that this protein belongs to?
Belongs to the NAD kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CLM9_HUMAN
Sequence: MRLLVLLWGCLLLPGYEALEGPEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEEGQETMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVEKRGPDESLLISLFVFPGPCCPPSPSPTFQPLATTRLQPKAKAQQTQPPGLTSPGLYPAATTAKQGKTGAEAPPLPGTSQYGHERTSQYTGTSPHPATSPPAGSSRPPMQLDSTSAEDTSPALSSGSSKPRVSIPMVRILAPVLVLLSLLSAAGLIAFCSHLLLWRKEAQQATETQRNEKFCLSRLTAEEKEAPSQAPEGDVISMPPLHTSEEELGFSKFVSA
What is the function of this protein?
Receptor which may mediate L-selectin-dependent lymphocyte rollings.  Binds SELL in a calcium dependent manner.  Binds lymphocyte (By similarity).
What are the official names of this protein?
CMRF35-like molecule 9, CLM-9, CD300 antigen-like family member G, Triggering receptor expressed on myeloid cells 4, TREM-4.
What is the protein family that this protein belongs to?
Belongs to the CD300 family.
What are the subcellular locations of this protein?
Apical cell membrane; Single-pass type I membrane protein. Basolateral cell membrane; Single-pass type I membrane protein. Endosome, multivesicular body membrane; Single-pass type I membrane protein. Note=Transcytoses across the cytoplasm.
Protein: BR2B_PULPI
Sequence: GFKGAFKNVMFGIAKSAGKSALNALACKIDKSC
What is the function of this protein?
Has antibacterial activity against the Gram-positive bacterium S. aureus ATCC 25923 (MIC=9 uM) and the Gram-negative bacterium E. coli ATCC 25726 (MIC=9 uM).
What are the official names of this protein?
Brevinin-2PTb.
What is the protein family that this protein belongs to?
Belongs to the frog skin active peptide (FSAP) family. Brevinin subfamily.
Protein: RL35_HELPG
Sequence: MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA
What are the official names of this protein?
50S ribosomal protein L35.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL35 family.
Protein: PG154_VAR67
Sequence: MDGTLFPGDDDLAIPATEFFSTKAAKKPEAKREAIVKADGDNNEETLKQRLTNLEKKITNVTTKFEQIEKCCKRNDDVLFRLENHAETLRAAMISLAKKIDVQTGRRPYE
What is the function of this protein?
Structural protein involved in the envelopment of mature virion (MV) to form the wrapped virion (WV).  The wrapping consists of the addition of Golgi membranes to the mature virion.  Participates in mature virion (MV) movement within the infected cell.  May play an indirect role in MV-cell fusion.
What are the official names of this protein?
Protein OPG154.
What is the protein family that this protein belongs to?
Belongs to the orthopoxvirus OPG154 protein family.
Protein: RL32_CHLTA
Sequence: MAVPRNRHSNARKNIRRSHHAKKACSAAVCSNCKQAFIPHTVCASCGFYKGKAVITVEK
What are the official names of this protein?
50S ribosomal protein L32.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL32 family.
Protein: HTPG_MYXXD
Sequence: MTVENAPQRETHAFQAEINQLLSLVINSLYSHKEIFLRELVSNASDALDKLRFRAITEPELLADEPALELRLIPDEAKGTLTIEDTGIGMSHDELVKNLGTIAHSGSREFIEALAQKGQQKDMQLIGQFGVGFYSAYLVADRVEVVSRAAGQGQSAWRWTSEAKGSFTVEPAERAARGTSITLHLKEDQKEFLGEWRLRSLITQYSDYVGHPIKLQVSKTTGTGDEAKTETSLEVVNKASALWQRSKSEITDEQYQEFYKHLTHDWEAPLAWTHFKADGNTQFTGLLFVPKQPPFDLDAQQQRGVRLFVKRVFIMDRCEELVPQWLRFVRGVIDSDDLPLNVSRELLQDSQVVRAIRKHVVKKSVDLLEKLAKDKPDDYLTFWKAFGTVLKEGLATEAEQKDKLGGLLRYESSREEGLTSLADYVGRMKEGQEAIYYVYGESRKAVADSPHLEALKQRGFEVLYMTDPVDEWAAQGLREFQGKPLVSALQADLKLQSTDEQKKEQEQHAEGLKTLTSKMKDVLQESVREVRVSDRLTDSPVCLVVPEGGSPAYLERLLQQRGRGAGMPRVKRILEVNPKHPVIEHLKAVHDRDPAAAQVAEWIELLHDQALLTEGSTIADPNRFARRMTGLLTQVAALAAAPAPAQTPASATAS
What is the function of this protein?
Molecular chaperone.  Has ATPase activity.
What are the official names of this protein?
Chaperone protein HtpG, Heat shock protein HtpG, High temperature protein G.
What is the protein family that this protein belongs to?
Belongs to the heat shock protein 90 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TIG_STRP6
Sequence: MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGEEVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSMEKGKEWTLSAEVVTKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFVGSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGKAAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGAAIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYSAEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSADMLKHDIAMKKAVEVITSTASVK
What is the function of this protein?
Involved in protein export.  Acts as a chaperone by maintaining the newly synthesized protein in an open conformation.  Functions as a peptidyl-prolyl cis-trans isomerase.
What are the official names of this protein?
Trigger factor, TF, PPIase.
What is the protein family that this protein belongs to?
Belongs to the FKBP-type PPIase family. Tig subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm.
Protein: PQQB_ACIAD
Sequence: MLIKILGSAAGGGFPQWNCNCENCLGLKQGTIQAKARTQSSIAISDNGKDWILCNASPDIAQQIAHNPELQAPSSIRRGTSIGSIILTDSQIDHTTGLLNLREGCPHQVWATPEVHEDLSTGFPIFNMLKHWNGGLVHHPIDIQTSFQVAVCEAIRFTPVPILSNAPPYSPYRHRPLPGHNIALWIEDTRTGHSLFYAPGLGQMDDSILSYMQRADCLLVDGTLWKDQELALLGVGKNTGQDMGHLALQEERGLIHLLSQFPKQRKVLIHINNTNPILNEDSVERATLKQLEIEVSYDGMLIEV
What is the function of this protein?
May be involved in the transport of PQQ or its precursor to the periplasm, in association with PQQ biosynthesis, but is not absolutely required for this synthesis.
What are the official names of this protein?
Coenzyme PQQ synthesis protein B, Pyrroloquinoline quinone biosynthesis protein B.
What is the protein family that this protein belongs to?
Belongs to the PqqB family.
Protein: PSBM_PSINU
Sequence: MEVNILAFIATALFISIPTAFLLIPYVQTATQSN
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  This subunit is found at the monomer-monomer interface.
What are the official names of this protein?
Photosystem II reaction center protein M, PSII-M.
What is the protein family that this protein belongs to?
Belongs to the PsbM family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: PROA_BRUMB
Sequence: MLVKADMTKDIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAADAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIYKALVKGLEAANLPADAIQIVPVTDRAAVGEMLKGLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVRGSGQVRG
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate.  The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
What are the official names of this protein?
Gamma-glutamyl phosphate reductase, GPR, Glutamate-5-semialdehyde dehydrogenase, Glutamyl-gamma-semialdehyde dehydrogenase, GSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the gamma-glutamyl phosphate reductase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL24_NITEU
Sequence: MKKIRKGDSVIVIAGKDKGKQSTVIRFQSTERVIVREVNKVKSHIKPNPNRNIAGGIVETEKPLHISNIAIFNPEKNKADRVGFRFNESGNKVRYFKSDGTLIDS
What is the function of this protein?
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
What are the official names of this protein?
50S ribosomal protein L24.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL24 family.
Protein: PRDX1_MOUSE
Sequence: MSSGNAKIGYPAPNFKATAVMPDGQFKDISLSEYKGKYVVFFFYPLDFTFVCPTEIIAFSDRADEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKADEGISFRGLFIIDDKGILRQITINDLPVGRSVDEIIRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVNKSKEYFSKQK
What is the function of this protein?
Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively.  Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events.  Might participate in the signaling cascades of growth factors and tumor necrosis factor-alpha by regulating the intracellular concentrations of H(2)O(2) (By similarity).  Reduces an intramolecular disulfide bond in GDPD5 that gates the ability to GDPD5 to drive postmitotic motor neuron differentiation (PubMed:19766572).
What are the official names of this protein?
Peroxiredoxin-1, Macrophage 23 kDa stress protein, Osteoblast-specific factor 3, OSF-3, Thioredoxin peroxidase 2, Thioredoxin-dependent peroxide reductase 2, Thioredoxin-dependent peroxiredoxin 1.
What is the protein family that this protein belongs to?
Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: BRAT1_ARATH
Sequence: MPMLMATRIDIIQKLNVYPRFQNHDKKKLITLSNLDRQCPLLMYSVFFYKNTTTRDFDSVFSNLKLGLEETMSVWYPAAGRLGLDGGGCKLNIRCNDGGAVMVEAVATGVKLSELGDLTQYNEFYENLVYKPSLDGDFSVMPLVVAQVTRFACGGYSIGIGTSHSLFDGISAYEFIHAWASNSHIHNKSNSKITNKKEDVVIKPVHDRRNLLVNRDAVRETNAAAICHLYQLIKQAMMTYQEQNRNLELPDSGFVIKTFELNGDAIESMKKKSLEGFMCSSFEFLAAHLWKARTRALGLRRDAMVCLQFAVDIRKRTETPLPEGFSGNAYVLASVASTARELLEELTLESIVNKIREAKKSIDQGYINSYMEALGGSNDGNLPPLKELTLISDWTKMPFHNVGFGNGGEPADYMAPLCPPVPQVAYFMKNPKDAKGVLVRIGLDPRDVNGFSNHFLDC
What is the function of this protein?
Brassinosteroids (BR) acyltransferase with acyl-CoA ligase activity toward brassinolide (BL), castasterone (CS), typhasterol (TY), 6-deoxotyphasterol (6-deoxoTY), and 6-deoxocastasterone (6-deoxoCS) and thus converts them to corresponding lauroyl esters (PubMed:23071642, PubMed:23204503, PubMed:23020607).  Regulates BR homeostasis and promotes BR-mediated cell growth regulation (PubMed:23071642, PubMed:23204503).  Involved in vascular bundle development (PubMed:23020607).
What are the official names of this protein?
Brassinosteroid-related acyltransferase 1, BR-related acyltransferase 1, Protein DWARF AND ROUND LEAF 1, Protein PIZZA.
What is the protein family that this protein belongs to?
Belongs to the plant acyltransferase family.
What are the subcellular locations of this protein?
Endoplasmic reticulum. Nucleus. Note=Localizes in the endoplasmic reticulum in young tissues and the phloem of vascular bundles.
Protein: FADA_STUS1
Sequence: MSLNPRDAVIVDFGRTPMGRSKGGMHRNTRAETMSAQLIDGLLARNPKIDPAEVEDVIWGCVNQTLEQGWNIARMASLLTRIPHTSAGQTVSRLCGSSMSALHTAVQAIQTNNGDVFVIGGVEHMGHVSMMHGVDPNPQLSLHAAKASGMMGLTAEMLGKMHGITREAQDQFGYRSHQLAWKATQEGKFKDEIIPMEGHDENGFLKVFDYDETIRPETTLEGLAELKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLQPMAVVRAMALAGVDPAIMGYGPVPSTQKALKRAGLTMDDISHVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNNGTLGVATMCIGLGQGISTVFERL
What is the function of this protein?
Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
What are the official names of this protein?
3-ketoacyl-CoA thiolase, Acetyl-CoA acyltransferase, Beta-ketothiolase, Fatty acid oxidation complex subunit beta.
What is the protein family that this protein belongs to?
Belongs to the thiolase-like superfamily. Thiolase family.
Protein: DAPF_ERYLH
Sequence: MRVSFTKMHGLGNDFIMLDARAESLPPMTAATARALADRKTGIGCDQVILLEPSDSADFRMRIFNADGGEVEACGNASRAVALLHGEAANVETSGGVIAIAPASGGARVDMGVPRFDWEAIPLAYAMDTLSLPVGWGELEAPAAVNVGNPHVVFFVDDADAVPLDTMGPGIETDPLFPERINVNIASLTGDDALKLHVWERGVGLTRACGTGACATAIAAMRRGLTGRKVAVTLPGGTLQIEWDADDHIIMTGPAAESFRGTFDWGDYS
What is the function of this protein?
Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.
What are the official names of this protein?
Diaminopimelate epimerase, DAP epimerase, PLP-independent amino acid racemase.
What is the protein family that this protein belongs to?
Belongs to the diaminopimelate epimerase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HOLIN_BPT4
Sequence: MAAPRISFSPSDILFGVLDRLFKDNATGKVLASRVAVVILLFIMAIVWYRGDSFFEYYKQSKYETYSEIIEKERTARFESVALEQLQIVHISSEADFSAVYSFRPKNLNYFVDIIAYEGKLPSTISEKSLGGYPVDKTMDEYTVHLNGRHYYSNSKFAFLPTKKPTPEINYMYSCPYFNLDNIYAGTITMYWYRNDHISNDRLESICAQAARILGRAK
What is the function of this protein?
Accumulates harmlessly in the cytoplasmic membrane until it reaches a critical concentration that triggers the formation of micron-scale pores (holes) causing host cell membrane disruption and endolysin escape into the periplasmic space (PubMed:11255004).  Determines the precise timing of host cell lysis (PubMed:22389108).  Regulated by specific antiholins that somehow sense superinfections and then delay lysis (PubMed:16166524, PubMed:22389108, PubMed:27381920, PubMed:34456892, PubMed:32562709).  Participates with the endolysin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles from the host cell.
What are the official names of this protein?
Holin, Lysis protein, Protein rV.
What is the protein family that this protein belongs to?
Belongs to the T4likevirus holin family.
What are the subcellular locations of this protein?
Host cell inner membrane; Single-pass type II membrane protein; Periplasmic side. Note=Classified as a class III holin.
Protein: HYEP_BOMMO
Sequence: MSRLLFIALPLLVLASIPLYLLVLKSPPPMPKLDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKDVEIVPLLLLHGWPGSVREFYEAIPHLTAVSRDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGDWGALIGSAMATSFPKEIIGFHSYMALTLSPAATFLEFVGALFPSLIVEPELANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYRWTKDQLIDNLMLYWSTKSIVTSMRLYAESFSSRHFDLKLDEIQVQVPTWVLQAKHELAYQPPCILKLKYTKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKNVKTEL
What is the function of this protein?
Catalyzes juvenile hormone hydrolysis.  Degrades juvenile hormone III (JH III) about 3 times and 5 times slower than juvenile hormone I (JH I) and II (JH II), respectively.  Degrades cis-stilbene oxide and trans-stilbene oxide about 18 and 43 times slower than JH III, respectively.
What are the official names of this protein?
Juvenile hormone epoxide hydrolase, bommo-JHEH.
What is the protein family that this protein belongs to?
Belongs to the peptidase S33 family.
Protein: RS11_POLNA
Sequence: MAKSPNNSAAQRVRKKVRKNVADGIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSRKSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGALGIRINSIADVTPVPHNGCRPQKRRRI
What is the function of this protein?
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA.  Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
What are the official names of this protein?
30S ribosomal protein S11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS11 family.
Protein: GCSPB_ALKOO
Sequence: MKSDYNKLIFEISKEGRKAYSLPKCDVEEVNLESLIPKEFLSDKELDLPEVSEVDVIRHYTQLSNKNYGVDTGFYPLGSCTMKYNPKLNEDMAVLPGFANIHPYQPEETVQGALELMYKLDKMLAEVAGMERMTLQPAAGAHGELVGLMVIKAYHKKRGDLKRTKIIIPDSAHGTNPASAAVAGFDVVEIKSNPDGSVNIDSLKSALSDEIAGLMLTNPSTLGLFETNIKQIADLVHDAGGLLYYDGANMNAIMGVTRPGDMGFDVIHYNIHKTFSTPHGGGGPGSGPVGVRKDLVEFLPSPVIEKKGEEYVLDYDRPYSIGKIKSFYGHFGILVRAYTYILSYGPALREVSEKAVLNANYMMHKLKEKYYLPIEQVCKHEFVLGGLNEDILGVSTLDIAKRLLDYGYHPPTIYFPLIVNEAMMIEPTETESVETLDQFIDALNKIADEAKETPELLKNAPHHTHVRRIDEAKAARNLIVKWEREQ
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Probable glycine dehydrogenase (decarboxylating) subunit 2, Glycine cleavage system P-protein subunit 2, Glycine decarboxylase subunit 2, Glycine dehydrogenase (aminomethyl-transferring) subunit 2.
What is the protein family that this protein belongs to?
Belongs to the GcvP family. C-terminal subunit subfamily.