PharMolix/UniProtQA huggingface dataset:
Protein: H2B4_VOLCA
Sequence: MAPKTKEEKPASEAVEPKAEAKPKAEKAPKKKEKKAPAKKSAKEPAAGDAAEGDKKKKKAKVAKSETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA
What is the function of this protein?
Core component of nucleosome.  Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template.  Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability.  DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
What are the official names of this protein?
Histone H2B.4, H2B-IV.
What is the protein family that this protein belongs to?
Belongs to the histone H2B family.
What are the subcellular locations of this protein?
Nucleus. Chromosome.
Protein: RK5_ARATH
Sequence: MASPSLLQSSASSFHGRFSPLAAPSSARMLSPPLRNVVKVSASGTVLVEKSEAEKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFREGGGGSTGAIVRKKKLKSHHFDAKGKGKR
What is the function of this protein?
Binds 5S rRNA, forms part of the central protuberance of the 50S subunit.
What are the official names of this protein?
50S ribosomal protein L5, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: S100P_HUMAN
Sequence: MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
What is the function of this protein?
May function as calcium sensor and contribute to cellular calcium signaling.  In a calcium-dependent manner, functions by interacting with other proteins, such as EZR and PPP5C, and indirectly plays a role in physiological processes like the formation of microvilli in epithelial cells.  May stimulate cell proliferation in an autocrine manner via activation of the receptor for activated glycation end products (RAGE).
What are the official names of this protein?
Protein S100-P, Migration-inducing gene 9 protein, MIG9, Protein S100-E, S100 calcium-binding protein P.
What is the protein family that this protein belongs to?
Belongs to the S-100 family.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm. Cell projection, microvillus membrane. Note=Colocalizes with S100PBP in the nucleus. Colocolizes with EZR in the microvilli in a calcium-dependent manner.
Protein: Y429_SHEHH
Sequence: MAIKDWPVGEGPREKLLNQGVKQLSDAELLAVLLRVGLKGLSAVELARTMINEFGGLRGLLAASQTQVCRLDGIGPVKFAQMQAAVELGTRISQENLQRGKILSDPDLTRDYLMRQLSDRAYEVFAILLLDSQHRVIQFVELFRGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADRRITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWID
What are the official names of this protein?
UPF0758 protein Shal_0429.
What is the protein family that this protein belongs to?
Belongs to the UPF0758 family.
Protein: RRF_BURL3
Sequence: MSVADTKKGVEQKMQRSIDAFKSDLAKIRTGRAHTGMLDHVQVDYYGSMVPISQVANMTLVDARTIGVQPWEKPMVAKVEKAIREADLGLNPATSGDQIRVPMPALTEERRRELTKVVKSEGETAKVAIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQSKEAEIMTV
What is the function of this protein?
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis.  May increase the efficiency of translation by recycling ribosomes from one round of translation to another.
What are the official names of this protein?
Ribosome-recycling factor, RRF, Ribosome-releasing factor.
What is the protein family that this protein belongs to?
Belongs to the RRF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NUDC_ECO55
Sequence: MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE
What is the function of this protein?
mRNA decapping enzyme that specifically removes the nicotinamide adenine dinucleotide (NAD) cap from a subset of mRNAs by hydrolyzing the diphosphate linkage to produce nicotinamide mononucleotide (NMN) and 5' monophosphate mRNA.  The NAD-cap is present at the 5'-end of some mRNAs and stabilizes RNA against 5'-processing.  Has preference for mRNAs with a 5'-end purine.  Catalyzes the hydrolysis of a broad range of dinucleotide pyrophosphates.
What are the official names of this protein?
NAD-capped RNA hydrolase NudC, DeNADding enzyme NudC, NADH pyrophosphatase.
What is the protein family that this protein belongs to?
Belongs to the Nudix hydrolase family. NudC subfamily.
Protein: SYFB_VIBVU
Sequence: MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDVLPVAGTFNGVKVGHVVECGQHPDADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGAVLPGDFKIKKAKLRGQPSHGMLCSFTELGIDVESDGIMELAIDAPIGMDFRDFLALNDVTVDVDLTSNRADCFSIRGMAREVGVLNRADVTEPSVAPVAPSIDDTVAIEVKAPAACPRYLGRVVKNVNVQAKTPLWMQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIDGGIVVRLAEQGEKITLLDGSEAELNADTLVVADHNKALAIAGIFGGEESGVTSETKDVLLECAFFAPDHIRGRARSYGLHTDSSMRFERGVDYALQVSAMERATALLVEICGGEVAPVVAVESEAELPKPNKVALRRTKLDNLLGHHIADSDVVEILERLGMTVETTAEGWVAVAPTWRFDIAIEQDLVEEVGRIYGYDNIPNQNPAAALKMHDHQEANIPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVDALILPNPISAEMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCDTAENGMRQEPMLAGVIAGTRSEEHWNIDTNTVDFFDLKGDVEAILELSANDKAYSFVAAKHPALHPGQSAAIVVDGKEIGVIGTVHPELERKFGLNGRTIVFEIEWSAINRKVIPEAVALSKFPANRRDIAVVVDEAVASGDIVNACLEVGGEFLKAAKLFDVYVGKGVEEGKKSLAIALTLQSNERTLEDADIAGAVDAIVTHVSEKFGASLRD
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: F120S_HUMAN
Sequence: MGKTKDIGDDDTVASEFWSGALSQPSSVPTRPRTPNRDSWRRAWAARGLHPRPSILQPGPARLSRARAGGTRCPQRRHGRATFCALGRGIGVRRGPGPRPARIPGLTLTWKRMSARRMQWAMQTGGRNQTFGGGVPLFWTWLTICCAVWRSLPCRLTHSCSRAFSSAPLKKTKSSMLPPKQALASAARNLCRGAGCNRQAVAGQLLPSTWSLHAHGLAKEAPILPVKKISRSCSVNNKVSKKTTKPPTLRSFLSPI
What are the official names of this protein?
Uncharacterized protein FAM120AOS, FAM120A opposite strand protein.
Protein: FMT_LEPIN
Sequence: MKIGYFGTPEHSAKLLEALIDSQLTEVLFVVTNPDRPKGRSKIPEPGPVKKKALEYNIPVFQYESIKKEKEKALSDFGLFSADLYVVFAYGSILPKEVYAHSTLTSINLHGSLLPDLRGASPVQTALWKGYTKTGITIQYIGEKMDEGDILLTKEVEIAPEDNTGTLMDKITDAGIESILQLLKTYDGKPFPSVPQAHDKATYCGKIKSEDRILDWSLKSEELHNRIRALYPDMIATTTFRDKRMNILKTKPSSLSLEINPTPGKLKRLDKKRLLTQCGDGRFLEILELQPENKNRMTASDFLNGFRIQEGETFG
What is the function of this protein?
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet).  The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus.
What are the official names of this protein?
Methionyl-tRNA formyltransferase.
What is the protein family that this protein belongs to?
Belongs to the Fmt family.
Protein: EIF3G_CAEBR
Sequence: MTGINLITSAPEVNSWAEAVEQDSAPHIQEGADGIRTETAFTEVDGVRYKVVTQFKVINKRVPKVVADRKKWVKFGSCKGEPAGPQVATTYVAEEVEMQFTRNRAGEQILDVQEDKQAAKTTSREHCRHCKGNDHWSTHCPYKVMYQLDEEADANQDADSKNALGLRGDGRQMERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEWTRPSN
What is the function of this protein?
RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.  The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.  This subunit can bind 18S rRNA.
What are the official names of this protein?
Eukaryotic translation initiation factor 3 subunit G, eIF3g, Eukaryotic translation initiation factor 3 RNA-binding subunit, eIF-3 RNA-binding subunit, Eukaryotic translation initiation factor 3 subunit 4.
What is the protein family that this protein belongs to?
Belongs to the eIF-3 subunit G family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PRIB_NEIMF
Sequence: MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHESWQEENGQQCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG
What is the function of this protein?
Stimulates the DNA unwinding activity of PriA helicase, which does not seem to require single-stranded DNA-binding by PriB.  Activates DNA-dependent ATP hydrolysis catalyzed by PriA.
What are the official names of this protein?
Primosomal replication protein N.
What is the protein family that this protein belongs to?
Belongs to the PriB family.
Protein: FENR1_BACC1
Sequence: MNREELFDVTVIGGGPAGLYSAFYSGLREMKTKIIEFQPQLGGKIHVYPEKMIWDVGGLLPVTGDKLIEQLVQQGLTFQPEVVLNTKVESIIRNKDGTFTLKANDGKEHFSKTVIVATGSGILKPQKLSIEGAERFEVSNLNYTVKSLKRFKDKTIIISGGGNSAVDWANELEPIAKKVYVTYRKEELSGHEAQVKQLLNSSAECFFHTSITKLIAGDSHEAIEYVELTNHETGEVSHLLIDEVIINHGYERDITLLENSELDVAIIDNFYIAGNANSESSVDGLYAAGDILKHEGKLHLIAGAFQDAGNAVNKAKQFIQPDASEYGMVSSHNEVFKKRNRELIKQMMK
What are the official names of this protein?
Ferredoxin--NADP reductase 1, FNR 1, Fd-NADP(+) reductase 1.
What is the protein family that this protein belongs to?
Belongs to the ferredoxin--NADP reductase type 2 family.
Protein: LDH2_STAAS
Sequence: MKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTLKEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKTLEDTFDSIKYLLED
What is the function of this protein?
Catalyzes the conversion of lactate to pyruvate (Potential).  Contributes to S. aureus growth during nitrosative stress in both aerobically and anaerobically cultured cells, despite playing a secondary role in this resistance mechanism (By similarity).
What are the official names of this protein?
L-lactate dehydrogenase 2, L-LDH 2.
What is the protein family that this protein belongs to?
Belongs to the LDH/MDH superfamily. LDH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1345_STAAN
Sequence: MDMNFDLYMNGVVEQARNEIESAGYEQLTTAEDVDKVLKQDGTTLVMINSVCGCAGGIARPAASHALHYDVLPDRLVTVFAGQDKEATQRAREYFEGYAPSSPSFALVKDGKITEMIERHQIEGHDVMNVINQLQTLFNKYCEER
What are the official names of this protein?
UPF0403 protein SA1345.
What is the protein family that this protein belongs to?
Belongs to the UPF0403 family.
Protein: FIS_SHEFN
Sequence: MFDQTTNTEVHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFSQLDGQEASEVYEMVLCEVEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
What is the function of this protein?
Activates ribosomal RNA transcription.  Plays a direct role in upstream activation of rRNA promoters.
What are the official names of this protein?
DNA-binding protein Fis.
What is the protein family that this protein belongs to?
Belongs to the transcriptional regulatory Fis family.
Protein: RL3_CITK8
Sequence: MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPAVKA
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
What are the official names of this protein?
50S ribosomal protein L3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL3 family.
Protein: PNP_EHRCJ
Sequence: MFNLIRKSTEWGGKTLILESGKIARQANGAVMVSYAGTTVLATVVTGKTKEPVDFLPLTVQFVAKSYAVGKIPGGFLKREGKPSDRETLISRLIDRSIRPLFPSGFYDEVSIVCNLLSYDTVTPPEVTALIGATAALSISGVSFNGLVAGVRIGYLPSEDKYLLNASADDMLYSSLDLFLSGNEDSVLMVESEASELSESQMLRAVTFGHQNCQEVINLIREFSEEKGVQPIEFIPHDINPIVNYIESSYKQDFSLAYSNTVKKERVLKLEELRDKVLSDFAEKCSVDNVECDNQDVISALKSFERSLVRSQIVETSSRIDGRAFDEIRNIEIEVDVLPKAHGSALFTRGNTQALVVTALGTPQDEQIVDDLDGDRRENFLLHYNFPPYAVGESAALRAPGRREIGHGKLAWRAIRYVLPEKSDFPYTIRVVSEITESDGSSSMATVCGASLALMDTGVPIKSPVAGIAMGLIKEGDKFIILSDILGDEDYLGDMDFKVAGTAEGVTALQMDMKISGISVDVIEKALLQAKDGRMHILSKMNAVIQESRNSIKNHAPRIESIFINKDKIRNVIGSGGKNIRDICEKTGAKIEIIQDGTVMIYAVNNEAVEYAKSMIMDIVTEPEIGKVFEGTVVEIVKFGAFVNFLGGKRGLIHISEIKNEHISAVGSVISVNDKVKVLVIGIDREHVQLSMRRVDQETGEPIDGELYNVRKSSFSDDSSSSGTSSSGSSFKESYSGNRHGSHEKRRSGGSRSSRRNSSGSNYYREDLHSSDFGNNNRSFSNSRNGHEVPRKPRFF
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y3342_MYCTU
Sequence: MTCSRRDMSLSFGSAVGAYERGRPSYPPEAIDWLLPAAARRVLDLGAGTGKLTTRLVERGLDVVAVDPIPEMLDVLRAALPQTVALLGTAEEIPLDDNSVDAVLVAQAWHWVDPARAIPEVARVLRPGGRLGLVWNTRDERLGWVRELGEIIGRDGDPVRDRVTLPEPFTTVQRHQVEWTNYLTPQALIDLVASRSYCITSPAQVRTKTLDRVRQLLATHPALANSNGLALPYVTVCVRATLA
What are the official names of this protein?
Uncharacterized methyltransferase Rv3342.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily.
Protein: AIMA_KRIFD
Sequence: MIKHRPHGIEHPYAVSPDQRVPVLPLAGEPVLLGVVAPEADRVVCEWGTLELPLSATSAAAADAAALAGGEGHLSEAQAKSLGADGAWSVQTPPLAEPVKYRFHAHRGGAAESTEWFEVSPAVWTADGVGEVRGGGERVRGVEWLVSSQGVHRGRFRLQLQDGDRLVGFGERYDALDQRGRELDAVVFEQYKAQGVHGRTYLPMPFAHVVGADGNGWGFHVRTSRRTWYSSAGNELTVEVALGDEPVVDLAIYEGDPATVLTGFLDEVGRAEELPGWVFRLWASGNEWNTQQLVTARMDTHRDLAIPVGAVVIEAWSDEQGITIWRDAVYAVTEDGSAHRAEDFSYRPDGAWPDPKAMIDELHARGIKVILWQIPLQKTEFSTGQVAADAAAMVRDGHAVLEADGTAYRNRGWWFPQALMPDLSVQRTRDWWTEKRRYLVEHFDVDGFKTDGGEHAWGHDLVYADGRKGDEGNNLYPVHYARAFGDLLRSAGKAPVTFSRAGFTGSQAHGIFWAGDEDSTWQAFRSSVTAGLTAASCGIVYWGWDLAGFSGPVPDAELYLRAAAASAFMPIMQYHSEFNHHQLPLRDRTPWHVAETTGDDRVVPLFRRFATLRESLVPYLTEQAARTIATDRPLMRPLFFDHENDPEIWNHPYQYLLGDELLINPVLEPGATTWTTYLPAGEWIDVWTGDRVPSGLVTRDVPLEVVPVYCRASRWSELQPVFS
What is the function of this protein?
Involved in the intracellular degradation of the cyclic tetrasaccharide cyclobis-(1-6)-alpha-nigerosyl (CNN) formed extracellularly from starch.  Catalyzes the hydrolysis of the alpha-1,3-glucosidic linkage of cyclobis-(1-6)-alpha-nigerosyl (CNN) to yield isomaltose via a possible linear tetrasaccharide.  It has a strong preference for the alpha-(1-3)-isomaltosyl moiety.
What are the official names of this protein?
1,3-alpha-isomaltosidase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 31 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEF1_PSEPK
Sequence: MAILNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVVMDLSEDRSEPRVFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRVRVKAQDRDGKPFELECEGLLAVCVQHEFDHLNGKLFVDYLSQLKRDRIKKKLEKQHRQQA
What is the function of this protein?
Removes the formyl group from the N-terminal Met of newly synthesized proteins.  Requires at least a dipeptide for an efficient rate of reaction.  N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
What are the official names of this protein?
Peptide deformylase 1, PDF 1, Polypeptide deformylase 1.
What is the protein family that this protein belongs to?
Belongs to the polypeptide deformylase family.
Protein: YWBG_BACSU
Sequence: MFIGIVSLFLTVLVYLGAKKVYQRFPRVYTSPLLVTPAVLVGLLLLVNVPYESYNLGGGLLTDMLQPATVAFAIPLYKYFPVLKKYAVEIILNVAVGSCIAIISTALIAKWLHLGTGLIDSLVPRSVTTPIAMNVSEMIGGMPAVTAVFVILTALLGTVIGPMVIRYFRIDNEIARGVLLGTSAHGAGTSKAFELSSVSGTISSVSMILAAIMTLCAAPFLLSFM
What are the official names of this protein?
Uncharacterized protein YwbG.
What is the protein family that this protein belongs to?
Belongs to the YohK (E.coli)/YwbG (IPA-22R) (B.subtilis) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: LSPA_PSEPF
Sequence: MPNAVGRFGRLSWLWLSLLVLVIDQASKFYFEGKLEMFQQIVVIPDLFSWTLAYNTGAAFSFLADSSGWQRWLFALIAIAVSAVLVVWLKRLGRNETWLAIALALVLGGALGNLYDRIALGHVIDFILVHWQNRWYFPAFNFADSAITVGAVMLALDMFKSKKTGEAVHD
What is the function of this protein?
This protein specifically catalyzes the removal of signal peptides from prolipoproteins.
What are the official names of this protein?
Lipoprotein signal peptidase, Prolipoprotein signal peptidase, Signal peptidase II, SPase II.
What is the protein family that this protein belongs to?
Belongs to the peptidase A8 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RSXB_ECOUT
Sequence: MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQELTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
What is the function of this protein?
Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.  Required to maintain the reduced state of SoxR.
What are the official names of this protein?
Ion-translocating oxidoreductase complex subunit B, Rsx electron transport complex subunit B.
What is the protein family that this protein belongs to?
Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
What are the subcellular locations of this protein?
Cell inner membrane.
Protein: TMCAL_CLOB6
Sequence: MNVSAIIVEYNPMHNGHLYHIKKTKELTNCDALVCIMSGNFVQRGFPSILDKWTKANMAISNGVDLVIELPTLYSLSSAEFFSFGAVSTLDSLNIINSICFGSEIGNINALQDIATTLLEEPLEYKILLKNYLDKGISFAKARNLALVELNRDNKIMSENINKILSLSNNILGIEYLKSLLLLNSSIKPFTITREGADYKDENLHKEYSSASSIRKYLKENKNINILKDFLPLEGFLEFKRLITKGYNFSMEDSMINYIRYKYISGYKNLHNLIDVSEGLDNRIYKSLEKNFTYDSLVGEIKSKRYAYSRIGRILCQYFIGFENYDLNSLLKSTPNYMRVLASNEAGLKVLKKIKKHSSTNIYTKVPKNTNTLLNLDIKATNAYSLLNNNIRFNEDYFRSPIIIKNTIY
What is the function of this protein?
Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates.  First activates an acetate ion to form acetyladenylate (Ac-AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
What are the official names of this protein?
tRNA(Met) cytidine acetate ligase.
What is the protein family that this protein belongs to?
Belongs to the TmcAL family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ADC_CLOBE
Sequence: MLESEVSKQITTPLAAPAFPRGPYRFHNREYLNIIYRTDLDALRKIVPEPLELDGAYVRFEMMAMPDTTGLGSYTECGQAIPVKYNEVKGDYLHMMYLDNEPAIAVGRESSAYPKKFGYPKLFVDSDALVGALKYGALPVVTATMGYKHEPLDLKEAYTQIARPNFMLKIIQGYDGKPRICELICAENTDITIHGAWTGSARLQLFSHALAPLADLPVLEIVSASHILTDLTLGTPKVVHDYLSVK
What is the function of this protein?
Catalyzes the conversion of acetoacetate to acetone and carbon dioxide.
What are the official names of this protein?
Acetoacetate decarboxylase, AAD, ADC.
What is the protein family that this protein belongs to?
Belongs to the ADC family.
Protein: MA2C1_RAT
Sequence: MAAAPFLKHWRTTFERVEKFVSPIYFTDCNLRGRLFGDSCPVTLSSFLTPERLPYEKAVQQNFSPAQVGDSFGPTWWTCWFRVELVIPEVWVGKEVHLCWESDGESLVWRDGEPVQGLTKEGEKTSYVLSERLHAADPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSQAKLAVFHRDVHNLLVDLELLLGVAKGLGEDNQRSFQALYTANQMVNICDPAQPETYPAAEALASKFFGQRGGESQHTIHATGHCHIDTAWLWPFKETVRKCARSWSTAVKLMERNTEFTFACSQAQQLEWVKNQYPGLYAQLQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLPDTFGYSAQLPQIMQGCGIKRFLTQKLSWNLVNSFPHHTFFWEGLDGSQVLVHFPPGDSYGMQGSVEEVLKTVTNNRDKGRTNHSGFLFGFGDGGGGPTQTMLDRLKRLGNTDGQPRVQLSSPGQLFTALERDSGQLCTWVGELFLELHNGTYTTHAQLKKGNRECEQILHDVELLSSLALARSAQFLYPAVQLQRLWRLLLLNQFHDVVTGSCIQLVAEDAMNYYEDIRSHGNTLLSAAAAALCAGEPGPKGLRHYQHTALEAHRSVGTTQGLVGLTRLALVTVPSIGYAPAPTPTSLQPLLPQQPVFVMQETDGSVTLDNGIIRVRLDPTGCLTSLVLVASGREAIAEGALGNQFVLFDDVPLYWDAWDVMDYHLETRKPVRGQAGTLAVGAEGGLRGSAWFLLQISPNSRLSQEVVLDVGCPYVRFHTEVHWHETHKFLKVEFPARVRSPQATYEIQFGHLQEADPQQHSWDWARYEVWAHRWIDLSECDFGLALLNNCKYGTSVRGNVLSLSLLRAPKAPDVTADMGRHEFTYALMPHKGSFQEAGVIQAAYNLNFPLLALPAPGPAPDTTWSAFSVSSPAVVLETIKQAEKSHQHRTLVLRLYEAHGSHVDCWLHTSLPVQEATLCDLLEQRDPTGHLSLQDNRLKLTFSPFQVRSLLLVLQPPAN
What is the function of this protein?
Cleaves alpha 1,2-, alpha 1,3-, and alpha 1,6-linked mannose residues from glycoproteins (PubMed:2211613).  Involved in the degradation of free oligosaccharides in the cytoplasm (By similarity).
What are the official names of this protein?
Alpha-mannosidase 2C1, Alpha-D-mannoside mannohydrolase, Mannosidase alpha class 2C member 1.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 38 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VM3DM_DABSI
Sequence: VATSEPNRYFNPYSYVELIITVDHS
What is the function of this protein?
Snake venom zinc metalloprotease that possesses high hemorrhagic activity (minimum hemorrhagic dose, MHD=0. 86 ug) when subcutaneously injected into mice.  Has potent fibrinogenolytic activity on alpha-chain of fibrinogen (FGA).  Hydrolyzes model substrate (beta-chain of insulin) at Ala(14)-Leu(15) and Tyr(16)-Leu(17) followed by His(10)-Leu(11) and Phe(24)-Phe(25).
What are the official names of this protein?
Zinc metalloproteinase-disintegrin-like daborhagin-M, Snake venom metalloproteinase, SVMP.
What is the protein family that this protein belongs to?
Belongs to the venom metalloproteinase (M12B) family. P-III subfamily. P-IIIa sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: DNAG_RICCN
Sequence: MRVAPEFYEFLRNRINISDVVRQKVALTRKSGNYVGLCPFHQEKTPSFTVSNSKRFFYCFGCKAAGDVIKFTSNISGLSYNESAIKLAIDYGIEIPKLTAKQKEFYEESDEILNILELANKFFRTQLTPEILHYLHERGITEETVKEFSIGFAPKNNKFEKFFHDKNIDIIKLGKAGLIGKRENGEIYNLFSNRITIPIRNIYNKIVGFGGRVLGEGLPKYLNSPETTVFQKSETLYGEHKAISSSYKKNHSILVEGYFDVIALHQAGFSETVASLGTSVTENHLHKLWRAGDEIILCLDGDNAGIKASIRTINLALPLINSEKKISFIRLPSGLDPDDAVNKNGADFFAKLIDKRISLSEMIWHIEYSGKSFKTAEEKANLEKNLKNYCSKISDSDLKVSYYRFFKDQIWQNLVTTQKKATTKNSNLAPIISSHGYSELEILEHAFCALLVKFPIILEEKDIRDFILNLNFNNKSLEEFRNWYLNEIIDNNVEASEITAIVEKTSFFDIFLLLSKTDNLFLDISFNKNNIRLDLLWQWLHKKYYLINLQQEYAITINSTDNHDFEKVLLYKKEILKIANELQVLNESFINHTIT
What is the function of this protein?
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
What are the official names of this protein?
DNA primase.
What is the protein family that this protein belongs to?
Belongs to the DnaG primase family.
Protein: MIAB_ECO5E
Sequence: MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP
What is the function of this protein?
Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
What are the official names of this protein?
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB, tRNA-i(6)A37 methylthiotransferase.
What is the protein family that this protein belongs to?
Belongs to the methylthiotransferase family. MiaB subfamily.
What are the subcellular locations of this protein?
Cytoplasm.