PharMolix/UniProtQA huggingface dataset:
Protein: RX_DUGJA
Sequence: INKRYNIDDILGIPDQKSLMLNNYQHQSVVENEICDSYQKKDISVNNRELLMVKRCPKDSSEQSPAISEADETESSPDQLSNCNKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRRQEKIEAANHTHNLQEVFPNVGKSLTSSLFPANPYPFLNMSLPSVESTSFFYHQNGMLNPMSMVNNLGFSNFSSLNLEPPKIPMTLPYGLFNEFSNFLSTRSSSKDLNSNSKTCSIRTADNLNTE
What are the official names of this protein?
Retinal homeobox protein Rax, DjRax.
What is the protein family that this protein belongs to?
Belongs to the paired homeobox family. Bicoid subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL18_AGRFC
Sequence: MASRKEALARRASRVRRQIKAVANGRPRLSVHRSSKNIYAQIIDDVAGKTLASASTLEADLRSSLKTGADVAAAAVVGKLVAERGVKAGVKDVVFDRGAFIYHGRIKAVAEAAREGGLNF
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: NUOD_AFIC5
Sequence: MSITEANALADAPGTRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKLIEQKTYLQAIPYFDRLDYVAPMNQEHAFCLAAEKLLGITVPRRGQLIRVLYSEIGRILSHLLNITTQALDVGALTPPLWGFEEREKLMMFYERASGSRMHAAFFRIGGVHQDLPPKLIGDIDIWCDAFPEKLDDLEILLTDNRIFKQRNVDIGVVTLDQAWEWGFSGVMVRGSGAAWDLRRAQPYECYDEMEFDIPIGKNGDCYDRYCIRVEEMRQSVRIMKQCIAKMRAPDGQGPVVIEDNKITPPRRGEMKRSMEALIHHFKLYTEGVHVPPGEVYAAVEAPKGEFGVYLVADGTNKPYKCKIRAPGFAHLQAMDFICKGHLLADVSAILGSLDIVFGEVDR
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit D, NADH dehydrogenase I subunit D, NDH-1 subunit D.
What is the protein family that this protein belongs to?
Belongs to the complex I 49 kDa subunit family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: BRG1_CANAL
Sequence: MSSSSSLSSSTTTATTTSARIRLPSISELTSRSTISGGSNNGNGSALKSQISPRLSDTSRILPSILKNTSGSSTPTSSSTPFKCPPIKSTVGGTLSSGNTQSNYVLGNTKINSLPRLSSPTLPVKVQPQQQPQLPPASSLSPVTRVINTPPQQPQSVSASTSPNTQYQYYQYQQQSSPIQQQQQQQQATPAATPTVMQMAQNQPSHPAPLQYATQQYYPQPVYYQSPAGVPPPPPSVTHQGHIIAVHQHPGHLPQVGVNGMPPNVGYTIVQPEIVNKSTNRCHRCGTTETPEWRRGPKGVRTLCNACGLFHAKLVKRKGAALAAEEVLNNKVTKGKNGRRISMKKHLLNESLKQQQQINGVGIPINGFNHQILPPSFKPQQGGIATLPPLMHGQYPNNVNNLVIHQPPPQQQQQQQQHNNIC
What is the function of this protein?
Transcription factor required for hyphal growth, biofilm formation, and virulence.  Promotes formation of both conventional and pheromone-stimulated biofilms.  Binds and recruits HDA1 to promoters of hypha-specific genes in a rapamycin-dependent manner.  Involved in the switch between two heritable states, the white and opaque states.  These two cell types differ in many characteristics, including cell structure, mating competence, and virulence.  Each state is heritable for many generations, and switching between states occurs stochastically at low frequency.
What are the official names of this protein?
Biofilm regulator 1.
What are the subcellular locations of this protein?
Nucleus.
Protein: RS4_FRATF
Sequence: MARYLGPKCKLSRREGTDLFLKSGVKANDEKCKMNTAPGQHGARRARLSDYGLQLREKQKVRRMYGILEGQFKKYYVEASRRKGNTGATLLELLESRLDNVVYRMGFAATRAEARQLVVHKGIMVNGHTCNVPSAQVKAGDVVAVREKAKKQLRIQNAVELAKHRKELSWIDVNTDSLEGTMKSSPDRSELSADINEQLIIELYSK
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
Protein: RBR1_PEA
Sequence: MSLPAETDMEDTKPSVVMVDNGDQAQFRFAEFSKNELALDEKSCKEAMDLFGETKHLLVANVLSMGNGTTEEAERNWFAFILYSIKKLAQKNEEIQKDEIENTGLTLCRILRAAKLNIAEFFKELPQFVVKAGPILSNLYGPDWENKLEAKEMHANTIHLKILSKYYKRVFEEFFVSTDANVENNSSVTNRVSEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPARFRSFNIHDSSRFVKKSANGVDLLASLCNLYNTSEDELRKTIEQANNLVADILKKKPCLASECETENLENFDRDGLTYFKDLMEESSLPSSLSVLENDYDHMTRNNGELDERLFINEDDSLLASGSLSRGSVSAGGVKRKIDLMTSPTKMITSPLSPHRSPASHANGIPSSATPMIAATPVSTAMTTAKWLRTVISPLPSKPSQELERFLTSCDKDITSDVIRRAQIILQAIFPSSPLGDRCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLATMCRAEAQILGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLEERLLESLVWEKGSSMYNSLAVARPALSVEINRLGLLAEPMRSLDEIAMDINFSCGGLPPVPSLPKPEPMSAQNGDPRSPKRPCTEHRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPEVFRSVFVDWSSARRNGSCKQRTGQEHIDIISFYNEVFIPSVKPLLVEIGPGGATTRNDRIPEANNKNDGHLAQCPGSPRISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPDS
What is the function of this protein?
Regulator of biological processes that recruits a histone deacetylase to control gene transcription.  May play a role in the entry into mitosis, negatively regulating the cell proliferation.  Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity).
What are the official names of this protein?
Retinoblastoma-related protein 1, PsRB1.
What is the protein family that this protein belongs to?
Belongs to the retinoblastoma protein (RB) family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PLSY_BURCJ
Sequence: MQILLAALVAYLIGSVSFAVVVSSVMGLADPRSYGSKNPGATNVLRSGNKKAAILTLVGDAFKGWIAVWLARHFGLPDVAVAWVAIAVFLGHLYPVFFRFQGGKGVATAAGVLLAVHPVLGLATALTWLIVAFFFRYSSLAALVAAVFAPVFDVFLFGTPGHNPVAWAVLAMSVLLVWRHRGNISKLLAGQESRIGDKKKAAADGGAQDGGKA
What is the function of this protein?
Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA).  This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
What are the official names of this protein?
Glycerol-3-phosphate acyltransferase, Acyl-PO4 G3P acyltransferase, Acyl-phosphate--glycerol-3-phosphate acyltransferase, G3P acyltransferase, GPAT, Lysophosphatidic acid synthase, LPA synthase.
What is the protein family that this protein belongs to?
Belongs to the PlsY family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: MNME_ACIAD
Sequence: MICIFLFLGFYMQYQTTIAAIATPPGRGGVGVIRLSGPKASLIAEHLTAKTLPAARMAGFRQFYDAEGLVMDEGLVLYFPNPNSFTGEDVVELQGHGGPVIQNALLERLFELGAKAAKAGEFSMRAFENGKLDLVQAEAIADLIDATSQAAARSAVRSLQGAFSLRINQVLEKLIHLRLHVEAAIDFPEEEIDFLADGKILALLDDVRDSVQQVQTSARQGQLLREGLQVVIAGKPNAGKSSLLNALAGNERAIVTDIAGTTRDVLHERISLNGLPITLTDTAGLRETGDIVEKEGIRRAIKEIEQADLLLLVYDLSEGADPLALAQEYFAEHLEPRRLILIGNKCDLMTGHPELAQYQNFRHVTVSAKMDMGVQALIDAITAHAGFQPEEDTFIARTRHLDAMKRTQLHLHEAREQLVVFHAGELVAESLRLAQNALSEITGEFSADDLLGKIFGSFCIGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DNLJ_STRPJ
Sequence: MNKRMNELVALLNRYATEYYTSDNPSVADSEYDRLYRELVELETAYPEQVLADSPTHRVGGKVLDGFEKYSHQYPLYSLQDAFSREELDAFDARVRKEVAHPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITENLKRVKDIPLTLPEELDITVRGECYMPRASFDQVNQVRQENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPSTRDSQEKGLKYLEQLGFVVNPKRILAENIDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFPAEEKEAQLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRKDDTVIVYKAGDIIPAVLRVVESKRVSEEKLDIPTNCPSCNSDLLHFEDEVALRCINPRCPAQIMEGLIHFASRDAMNITGLGPSIVEKLFAANLVKDVADIYRLQEEDFLLLEGVKEKSAAKLYQAIQASKENSAEKLLFGLGIRHVGSKVSQLLLQYFHSIENLSQADSEEVASIESLGGVIAKSLQTYFATEGSEILLRELKETGVNLDYKGQTVVADAALSGLTVVLTGKLERLKRSEAKSKLESLGAKVTGSISKKTDLVVVGADAGSKLQKAQELGIQVRDEAWLESL
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
Protein: FPOF_METMA
Sequence: MPPKIAEVIQHDVCAACGACEAVCPIGAVTVKKAAEIRDPNDLSLYEKGAAFQVCEGCLTCSRICPVVDGFIENELLNVRKFFGAKSKDNAGSQDGGVTSGILKALFNKGEIDCAVGITRNENWEPEVVLLTSAEDVERTRGTKYTSDPVVAALREAFEKYDRIAVVGVPCQAHAARLIRENVNEKIVLIIGLLCMESFHHDVMLDKIIPEIMKVNVRDIVKMEFTKGKFWVYTKDGEVHSVPIKDIAKYARNPCHHCCDYTSVFADISVGSVGAPDGWNSVFIRTEIGEKYFDMVRDEMEIMEDPKPGLELVGKLIEMKRKGNAEHFQEVCKEFSFETGIRSETV
What is the function of this protein?
Component of the F(420)H(2) dehydrogenase (FPO complex) which is part of the energy-conserving F(420)H(2):heterodisulfide oxidoreductase system.  The membrane-bound electron transfer system of the complex plays an important role in the metabolism of methylotrophic methanogens when the organisms grow on methanol or methylamines.  Catalyzes the oxidation of methanophenazine to dihydromethanophenazine.  It shuttles electrons from F(420)H(2), via FAD and iron-sulfur (Fe-S) centers, to methanophenazine (an electron carrier in the membrane).  It couples the redox reaction to proton translocation (for every two electrons transferred, two hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.  It also catalyzes the oxidation of F(420)H(2) with quinones such as 2,3-dimethyl-1,4-naphthoquinone, 2-methyl-1,4-naphthoquinone and tetramethyl-p-benzoquinone.  Might have a dual function, acting as an electron input module when connected to the membrane integral Fpo complex, or as a soluble single subunit, being involved in the reoxydation of reduced ferredoxin in the cytoplasm (PubMed:21306561).
What are the official names of this protein?
F(420)H(2) dehydrogenase subunit F, Coenzyme F420 oxidoreductase (ferredoxin), F(420)H(2)-dependent phenazine dehydrogenase subunit F, F(420)H(2)-dependent phenazine oxidoreductase subunit F, FPO subunit F, Methanophenazine hydrogenase subunit F, Methanosarcina-phenazine hydrogenase subunit F.
What are the subcellular locations of this protein?
Membrane; Peripheral membrane protein. Cytoplasm.
Protein: METXS_LEPCP
Sequence: MVTLGHVTAQQMSFSDALPLRSGAALRDYTLVYETYGTLNADRSNAVLVCHALNASHHVAGTYADSDRSEGWWDNLIGPGKPLDTNRFFVIGVNNPGSCFGSTGPTHPNPATGRPYGADFPVVTVEDWVDAQARLLDGLGIERLAAVIGGSLGGMQALSWTLRHPARVGHALIIASAPNLSAQNIAFNEVARRAIITDPDFHAGHFYAHGVVPKRGLRVARMIGHITYLSDDSMEAKFGRALRSAELAYSTQEIEFQIESYLRYQGDKFSEYFDANTYLLITRALDYFDPAREFGGNLSAALAVARAKFLVVSFTTDWRFSPLRSREIVKALLDNRRDVSYAEIAAPHGHDAFLLDDPRYHGVLRAYFERVAQELPR
What is the function of this protein?
Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
What are the official names of this protein?
Homoserine O-succinyltransferase, HST, Homoserine transsuccinylase, HTS.
What is the protein family that this protein belongs to?
Belongs to the AB hydrolase superfamily. MetX family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YBEY_NOCSJ
Sequence: MSIEILNESGHPLDVKRLAALSRFVMDRMRVHPLAELCIKAVDEPTIAQLNEQWMEKAGPTDVLAFPMDELRPGLVDEDPEEGVLGDLVLCPDVAARQGETAGHGTEAEIELLTVHGILHLLGYDHAEPEEHREMFGLQDELLAAWRAR
What is the function of this protein?
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
What are the official names of this protein?
Endoribonuclease YbeY.
What is the protein family that this protein belongs to?
Belongs to the endoribonuclease YbeY family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YTAF_BACSU
Sequence: MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFISMLIGSFLTKFFPVYVTEKLGGLILVGIGAWVLYQFFKPAKDKEYLLHEKTLLNLEVRSLGIVIHILRKPMSADIDKSGVINGIEAVLLGFALSIDAFGAGIGAAILGFSPIVMSIAVAIMSSLFVSIGINAGHFLSKWKWIDKMAFLPGLLLITIGLWKL
What are the official names of this protein?
Probable sporulation protein YtaF.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: VSP13_BORHE
Sequence: MRKRISAIIMTLFMVLVSCNNGGPKLKSDEVAKSDGTVLALAKISKKIKDASDFATSVKEVHTLVKSIDELAKAIGKKIHNDGSLTTEDGKNGSLLAGVHSVISAVKTKLGSLEQKAIGEFAGMKVQVVAIKTASIDLLNKFKDKNAELGKNEVSNDDAKAAILVSNTTKDKGASELEALNTAIDGLLKAANGAVEAAITELTVPVKVEKPSQNN
What is the function of this protein?
The Vlp and Vsp proteins are antigenically distinct proteins, only one vlp or vsp gene is transcriptionally active at any one time.  Switching between these genes is a mechanism of host immune response evasion.
What are the official names of this protein?
Variable small protein 13.
What is the protein family that this protein belongs to?
Belongs to the variable small protein (Vsp) family.
What are the subcellular locations of this protein?
Cell outer membrane; Lipid-anchor.
Protein: PSRP_NEIMF
Sequence: MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDTPEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKELNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGKTPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQERRPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF
What is the function of this protein?
Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
What are the official names of this protein?
Putative phosphoenolpyruvate synthase regulatory protein, PEP synthase regulatory protein, PSRP, Pyruvate, water dikinase regulatory protein.
What is the protein family that this protein belongs to?
Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PSRP subfamily.
Protein: PNCB_BORPD
Sequence: MIITSLLDTDLYKFSMMQVVLHHFPAAQVEYRYKCRTPGVNLRPYLDEIRAEVHALCQLRFTEEELQYLGSLRFIKSDFVDFLGLFHLPERCISIGEGEQPGEIAITVAGPWLHTILFEIPVLAIVNEVYFRNTRRHPDWDEGRQRLQSKMHLVLDDPALADFRVAEYGTRRRFSKLWHEEIVSTMKAQMGAHFAGTSNVLLAMRHNVLPLGTMGHEYLQACQALGPRLRDSQVFALEVWAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFVWGERLLEHYRNNRVDPRAKTLVFSDSLTFPRAIELARQFAGRCKVSFGIGTNLTNDLGHEPLQIVMKMVRCNGQPVAKVSDAPEKTMCDDPAYLAYLRQVFQLPPA
What is the function of this protein?
Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.
What are the official names of this protein?
Nicotinate phosphoribosyltransferase, NAPRTase.
What is the protein family that this protein belongs to?
Belongs to the NAPRTase family.
Protein: HBA2_OTOCR
Sequence: MVLSPTDKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLSHGSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR
What is the function of this protein?
Involved in oxygen transport from the lung to the various peripheral tissues.
What are the official names of this protein?
Hemoglobin subunit alpha-B, Alpha-B-globin, Alpha-II, Hemoglobin alpha-B chain.
What is the protein family that this protein belongs to?
Belongs to the globin family.
Protein: NFYA6_ARATH
Sequence: MQEFHSSKDSLPCPATSWDNSVFTNSNVQGSSSLTDNNTLSLTMEMKQTGFQMQHYDSSSTQSTGGESYSEVASLSEPTNRYGHNIVVTHLSGYKENPENPIGSHSISKVSQDSVVLPIEAASWPLHGNVTPHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSPPFLIPPHVFKNSPGKFRQMDISRGGVVSSVSTTSCSDITGNNNDMFQQNPQFRFSGYPSNHHVSVLM
What is the function of this protein?
Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.
What are the official names of this protein?
Nuclear transcription factor Y subunit A-6, AtNF-YA-6.
What is the protein family that this protein belongs to?
Belongs to the NFYA/HAP2 subunit family.
What are the subcellular locations of this protein?
Nucleus.
Protein: Y031_SIFVH
Sequence: MRITEEGWAGEGKILVRYAIVEEIPGKLYHVVCPSLRFFEYCFDLNQCRKIALSLSEKVKDFLYV
What are the official names of this protein?
Uncharacterized protein 31.
Protein: ISPE_LEPIN
Sequence: MISPAKINLGLEIPFKRLDGFHEIRSVFLKISWGDDIEIEPASNGVFELFSNNEIILEKRKLYDQVSERGDIKNNILYKTFIKARSLFPELPGVKIHLTKRISPAGGLGGGSTNAASLLNFLFSWRPFFTSDEMFVLAAEIGSDVPFFLGEGHAFVTGKGEILEEIEVHHGQGILALTPQVMNTSEMYSLLKKPLQESASQKNGNTLSKNLISILKNGDWSSLQGRLWNDFEPVAFQLHPELGVLKDKFLEFGSSYCSLTGSGSSMYGLVQGLEIQEELLQRLRQEFSNLTFVRFNF
What is the function of this protein?
Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
What are the official names of this protein?
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, CMK, 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase.
What is the protein family that this protein belongs to?
Belongs to the GHMP kinase family. IspE subfamily.
Protein: Y2003_PSEPG
Sequence: MLPALLNTGLGLRRGLLPELLAMAPGAVDFLECAPENWIAVGGAYGKGLAELAERFPITCHGLSLSLGGSAPLDWQFLDQIRQFLDRHQVRLYSEHLSYCSDDGHLYDLMPIPFTDEAVHHVAARIRRAQTHLERRIAVENISYYAAPYAAMSELEFIRAVLDEADCDLLLDVNNVFVNACNHGYDAREFLEGLPRARVTCMHIAGHYDEAPDLKVDTHGAPVKEDVWALYAFACERFGVQPTVLERDFNLPPLAQLLEETARIRDMQRSWGGQRHE
What are the official names of this protein?
UPF0276 protein PputGB1_2003.
What is the protein family that this protein belongs to?
Belongs to the UPF0276 family.
Protein: KCY_STRPJ
Sequence: MKTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVVEKIKAEAEKRM
What are the official names of this protein?
Cytidylate kinase, CK, Cytidine monophosphate kinase, CMP kinase.
What is the protein family that this protein belongs to?
Belongs to the cytidylate kinase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS4X_DANRE
Sequence: MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPTGFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKRLAAKQSSS
What is the function of this protein?
Component of the small ribosomal subunit.  The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.  Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit.  During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome.
What are the official names of this protein?
40S ribosomal protein S4, X isoform.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eS4 family.
Protein: TOE3_ARATH
Sequence: MWNLNDSPDHHEESDSRGNPVGHVSNGMSQSATWLPFVLPVTRNFFPAQSMEPGVRWSGFNSVGKSDPSGSGRPEEPEISPPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSSETTRNGHNLGLSLGESSSEEFRLKSDIASIRSRIRDEERLLGSDLSLAMMTTTVRSEKQQSDGGGNRVVGMAASSGFSPQPSPYRIPRTFHFSRP
What is the function of this protein?
Probably acts as a transcriptional activator.  Binds to the GCC-box pathogenesis-related promoter element.  May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).  May regulate negatively the transition to flowering time and confers flowering time delay.
What are the official names of this protein?
AP2-like ethylene-responsive transcription factor TOE3, Protein TARGET OF EAT 3.
What is the protein family that this protein belongs to?
Belongs to the AP2/ERF transcription factor family. AP2 subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: RS7_STAS1
Sequence: MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVKERSGREAVEVFEEAIDNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWLVNYSRLRGEKTMEERLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: CRP_ECOL6
Sequence: MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR
What is the function of this protein?
A global transcription regulator.  Complexes with cyclic AMP (cAMP) which allosterically activates DNA binding to regulate transcription.  It can act as an activator, repressor, coactivator or corepressor.  Induces a severe bend in DNA.  Acts as a negative regulator of its own synthesis as well as for adenylate cyclase (cyaA), which generates cAMP.  Plays a major role in carbon catabolite repression (CCR) (By similarity).
What are the official names of this protein?
cAMP-activated global transcriptional regulator CRP, Catabolite activator protein, CAP, Catabolite gene activator, cAMP receptor protein, CRP, cAMP regulatory protein.
Protein: IRTA_MYCTU
Sequence: MARGLQGVMLRSFGARDHTATVIETISIAPHFVRVRMVSPTLFQDAEAEPAAWLRFWFPDPNGSNTEFQRAYTISEADPAAGRFAVDVVLHDPAGPASSWARTVKPGATIAVMSLMGSSRFDVPEEQPAGYLLIGDSASIPGMNGIIETVPNDVPIEMYLEQHDDNDTLIPLAKHPRLRVRWVMRRDEKSLAEAIENRDWSDWYAWATPEAAALKCVRVRLRDEFGFPKSEIHAQAYWNAGRAMGTHRATEPAATEPEVGAAPQPESAVPAPARGSWRAQAASRLLAPLKLPLVLSGVLAALVTLAQLAPFVLLVELSRLLVSGAGAHRLFTVGFAAVGLLGTGALLAAALTLWLHVIDARFARALRLRLLSKLSRLPLGWFTSRGSGSIKKLVTDDTLALHYLVTHAVPDAVAAVVAPVGVLVYLFVVDWRVALVLFGPVLVYLTITSSLTIQSGPRIVQAQRWAEKMNGEAGSYLEGQPVIRVFGAASSSFRRRLDEYIGFLVAWQRPLAGKKTLMDLATRPATFLWLIAATGTLLVATHRMDPVNLLPFMFLGTTFGARLLGIAYGLGGLRTGLLAARHLQVTLDETELAVREHPREPLDGEAPATVVFDHVTFGYRPGVPVIQDVSLTLRPGTVTALVGPSGSGKSTLATLLARFHDVERGAIRVGGQDIRSLAADELYTRVGFVLQEAQLVHGTAAENIALAVPDAPAEQVQVAAREAQIHDRVLRLPDGYDTVLGANSGLSGGERQRLTIARAILGDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLVIAHRLHTITRADQIVVLDHGRIVERGTHEELLAAGGRYCRLWDTGQGSRVAVAAAQDGTR
What is the function of this protein?
Part of the ABC transporter complex IrtAB involved in the import of iron-bound mycobactin (Fe-MBT) and carboxymycobactin (Fe-cMBT) (PubMed:16385031, PubMed:19948799) (By similarity).  Mycobactins are then reduced by the siderophore interaction domain to facilitate iron release in the bacterial cell (By similarity).  Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity).  Required for replication in human macrophages and in mouse lungs (PubMed:16385031).
What are the official names of this protein?
Mycobactin import ATP-binding/permease protein IrtA, Iron-regulated transporter A.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Siderophore-Fe(3+) uptake transporter (SIUT) (TC 3.A.1.21) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.