PharMolix/UniProtQA huggingface dataset:
Protein: SFC1_ARATH
Sequence: MATRTESKKQIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDRVGAYKGIAHCGSKVVRTEGVRALWKGLTPFATHLTLKYTLRMGSNAMFQTAFKDSETGKVSNRGRFLSGFGAGVLEALAIVTPFEVVKIRLQQQKGLSPELFKYKGPIHCARTIVREESILGLWSGAAPTVMRNGTNQAVMFTAKNAFDILLWNKHEGDGKILQPWQSMISGFLAGTAGPFCTGPFDVVKTRLMAQSRDSEGGIRYKGMVHAIRTIYAEEGLVALWRGLLPRLMRIPPGQAIMWAVADQVTGLYEMRYLRNAPL
What is the function of this protein?
May transport cytoplasmic succinate, derived from fatty acid oxidation, into the mitochondrial matrix in exchange of fumarate during lipid mobilization in seed germination.  Conversion of seed-reserved triacylglycerols into sucrose is necessary for growth before the onset of photosynthesis and involves fatty acid beta-oxidation, the glyoxylate cycle and gluconeogenesis.
What are the official names of this protein?
Mitochondrial succinate-fumarate transporter 1, AtMSFC1.
What is the protein family that this protein belongs to?
Belongs to the mitochondrial carrier (TC 2.A.29) family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: LYRM9_BOVIN
Sequence: MAPLPGAELVQTPLQLYRYLLRCCRQLPTKGIQEHYKHAVRQSFRVHSDEDNPERIQQIIKRAIEDADWILNKYKKQN
What are the official names of this protein?
LYR motif-containing protein 9.
What is the protein family that this protein belongs to?
Belongs to the complex I LYR family. LYRM9 subfamily.
Protein: LDT3_MYCTU
Sequence: MRAVFGCAIAVVGIAGSVVAGPADIHLVAAKQSYGFAVASVLPTRGQVVGVAHPVVVTFSAPITNPANRHAAERAVEVKSTPAMTGKFEWLDNDVVQWVPDRFWPAHSTVELSVGSLSSDFKTGPAVVGVASISQHTFTVSIDGVEEGPPPPLPAPHHRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSSSVGIPVDDPDGYRLSVDYAVRITSRGLYVHSAPWALPALGLENVSHGCISLSREDAEWYYNAVDIGDPVIVQE
What is the function of this protein?
Probable L,D-transpeptidase that may perform as-yet-unknown cross-linking reactions in M. tuberculosis.  Is not able to generate 3->3 cross-links in peptidoglycan, using tetrapeptide stems as acyl donor substrates.  May function in the anchoring of proteins to peptidoglycan.
What are the official names of this protein?
Probable L,D-transpeptidase 3, LDT 3, Ldt(Mt3).
Protein: HEP2_HUMAN
Sequence: MKHSLNALLIFLIITSAWGGSKGPLDQLEKGGETAQSADPQWEQLNNKNLSMPLLPADFHKENTVTNDWIPEGEEDDDYLDLEKIFSEDDDYIDIVDSLSVSPTDSDVSAGNILQLFHGKSRIQRLNILNAKFAFNLYRVLKDQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHSILHFKDFVNASSKYEITTIHNLFRKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAFISKTNNHIMKLTKGLIKDALENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYVGGISMLIVVPHKMSGMKTLEAQLTPRVVERWQKSMTNRTREVLLPKFKLEKNYNLVESLKLMGIRMLFDKNGNMAGISDQRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLSTQVRFTVDRPFLFLIYEHRTSCLLFMGRVANPSRS
What is the function of this protein?
Peptides at the N-terminal of HC-II have chemotactic activity for both monocytes and neutrophils.
What are the official names of this protein?
Heparin cofactor 2, Heparin cofactor II, HC-II, Protease inhibitor leuserpin-2, HLS2, Serpin D1.
What is the protein family that this protein belongs to?
Belongs to the serpin family.
Protein: CYC6_THELV
Sequence: ADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMNSEDAIIYQVQHGKNAMPAFAGRLTDEQIQDVAAYVLDQAAKGWAG
What is the function of this protein?
Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.
What are the official names of this protein?
Cytochrome c6, Cytochrome c-553, Cytochrome c553, Soluble cytochrome f.
What is the protein family that this protein belongs to?
Belongs to the cytochrome c family. PetJ subfamily.
What are the subcellular locations of this protein?
Cellular thylakoid lumen.
Protein: FADR_SHEON
Sequence: MIINAKGPASFAEKYIVRSIWENKFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLKIQHGKPTRVNNFWETSGLNILETIADLNPEGFPVLVDQLLSARTNVSAIYFRGALRNNPDTAMEVLAQIHQLEDTAESFAEYDYLLHHTLAFSSGNPLYVLILNGFKGLYSRVGRYYFSSSEARQLALNFYKELELLAKAKNYLDVPALMRTYGINSGKMWLQLRDDMPSSIAQQDSH
What is the function of this protein?
Multifunctional regulator of fatty acid metabolism.
What are the official names of this protein?
Fatty acid metabolism regulator protein.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RNPH_SINMW
Sequence: MRPSGRKTDQMRKVSFERNFSKHAEGSCLVRFGDTHVLCTASLEDKVPGWLRNGGKGWVTAEYGMLPRATGERMRREASAGKQSGRTQEIQRLIGRSLRAVVDLPALGERQISVDCDVIQADGGTRTASITGAWIALHDCLKWMEARNMVKLEKVLKDHVAAISCGIFASQPVVDLDYLEDSAAETDANFVMTGSGGLVEIQGTAEGKPFSEEEFASLMLLAKNGIAELIEMQKLAIAG
What is the function of this protein?
Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation.  Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important.  Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
What are the official names of this protein?
Ribonuclease PH, RNase PH, tRNA nucleotidyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNase PH family.
Protein: RS7_DESAH
Sequence: MARKKIVSGHLKNAISKDEHISVKFVNCIMRDGKKSVAEKVFKDAMELVEEKLGESSLKVFEKAIGNIRPSVEVKSRRVGGSTYQVPTEIKSSRQTALAFRWLLRFSRSRSEKGLSNKLAAELLDAYNERGGAVKKKEDTHKMAEANKAFAHFRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: NEF_HV2D1
Sequence: MGASGSKKRSEHSQGLRERLLRARGGGYVKQRNASGGESSQSQEGSGREQKSPSCEGQQYQQGEFMNTPWRTPAAIGQKNSYKQQNMDDVDSDDDDLVGVPVMPRVPLREMTYKLAIDMSHFIKEKGGLEGIFYSRERHRILDLFLEKEEGIIPDWQNYTHGPGTRYPMYFGWLWKLVPVDISQEAEEVETNCLVHPAQTSRYDDEHGETLVWRFDPMLAYSYKAFILHPEEFGHKSGLPEKEWKAKLKARGIPYSE
What is the function of this protein?
Extracellular Nef protein targets CD4(+) T-lymphocytes for apoptosis by interacting with CXCR4 surface receptors.
What are the official names of this protein?
Protein Nef, 3'ORF, Negative factor, F-protein.
What is the protein family that this protein belongs to?
Belongs to the lentivirus primate group Nef protein family.
What are the subcellular locations of this protein?
Host cell membrane; Lipid-anchor; Cytoplasmic side. Note=Associates with the inner plasma membrane through its N-terminal domain.
Protein: BMP3_MOUSE
Sequence: MAGARGLLCLWLGYFCLNLAQGQRPNLHLPGLRETEPSDRATGGSPSPDLRPHDKVSEHMLWLYDRYSGSSRVQATRTPGSQLPGPQPLRGGNTVRSFRAAAAGTPQTKGLHTFNLTSLTKSENILSATLYFYVGELVNISLSCPEPQGCSHHTQRQHIQIDLSAWILKSNQSQLLGHLSVDVVRPYRDSVSWLSKDITQLLRKAKQNEEFLIGFNITSRAHELPKRMLFFPEPYILVYANDAAISEPESVVSSLQRHRDFTAGTGPRLDSHVREALSVERRKKRSTGILLPLQNNELPGAEYQYKEEGAWEERKPYKSLQTQPPEKSRNKKKQRKGSHQKGQTLQFDEQTLKKARRKQWVEPRNCARRYLKVDFADIGWSEWIISPKSFDAFYCSGACQFPMPKSLKPSNHATIQSIVRAVGVVSGIPEPCCVPEKMSSLSILFFDENKNVVLKVYPNMTVDSCACR
What is the function of this protein?
Negatively regulates bone density.  Antagonizes the ability of certain osteogenic BMPs to induce osteoprogenitor differentitation and ossification.
What are the official names of this protein?
Bone morphogenetic protein 3, BMP-3.
What is the protein family that this protein belongs to?
Belongs to the TGF-beta family.
What are the subcellular locations of this protein?
Secreted.
Protein: ISCS_ECOSE
Sequence: MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH
What is the function of this protein?
Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis.  Catalyzes the removal of elemental sulfur and selenium atoms from cysteine and selenocysteine to produce alanine.  Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.  Also functions as a selenium delivery protein in the pathway for the biosynthesis of selenophosphate.
What are the official names of this protein?
Cysteine desulfurase IscS.
What is the protein family that this protein belongs to?
Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RRF_AYWBP
Sequence: MQQFAKDILASLEIKMTQAQELMLKNFCDIRTGTANPNILDKITVNYYGATTFLKTLASISVSEGNQINIKPYDSNLIPNIKKVLLASNLGITPQTDGVVVRLVFPKPTEERRKALMKEVEQLSEKTKVAIRNVRREGNDKIKKVELTKDLETFYLNQIQTLTDKNIKLIDKQTATKNIELSKA
What is the function of this protein?
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis.  May increase the efficiency of translation by recycling ribosomes from one round of translation to another.
What are the official names of this protein?
Ribosome-recycling factor, RRF, Ribosome-releasing factor.
What is the protein family that this protein belongs to?
Belongs to the RRF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLYA_AZOVD
Sequence: MFSRDLTLARYDAELFAAMKQEAQRQEDHIELIASENYTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYQALVKPGDTVLGMSLAHGGHLTHGASVNFSGKMYNAVQYGIDANGFIDYDEVERLALEHKPKMIVAGYSAYSQVLDFARFREIADKVGAYLFVDMAHFAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLILAKANEEIEKKLNSAVFPGGQGGPLEHVIAAKAVCFKEALQPDFKEYQQQVVKNAKAMAQVFIERGFDVVSGGTENHLFLVSLIKQEITGKDADAALGRAFITVNKNSVPNDPRSPFVTSGLRIGTPAVTTRGFKETECRELAGWICDILVDLNNEAVVDGVREKVQAICARFPVYGK
What is the function of this protein?
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier.  This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules.  Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
What are the official names of this protein?
Serine hydroxymethyltransferase, SHMT, Serine methylase.
What is the protein family that this protein belongs to?
Belongs to the SHMT family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EX7S_ACISJ
Sequence: MRPWRCVSMAKAPAAPSSTQPDPVSYEAALEELEQLVGRIESGQLPLDQMLAGYQRGAVLLNFCRARLEAVQDQIKVLDEGALQPWVQE
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GCH1_MARMM
Sequence: MDAVTPDAARIAAAINTKPSREEAEAAVRTLISWAGDDPTREGLLDTPKRVVKAYEEWFSGYDADPLKALGKTFEDVQGYDDMVMLTNIDVESHCEHHLAPIMGVAHVAYLPSKAVVGISKIARVVEIFSKRMQTQETMTAQIADALTEAMEPRGVAVLVDAKHQCMTTRGVHHPNVSTITTTFTGEFRNDRDLKDRFMRLLERA
What are the official names of this protein?
GTP cyclohydrolase 1, GTP cyclohydrolase I, GTP-CH-I.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase I family.
Protein: BETB_BURL3
Sequence: MSVFGLQRLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQRVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQVELGRYNPVF
What is the function of this protein?
Involved in the biosynthesis of the osmoprotectant glycine betaine.  Catalyzes the irreversible oxidation of betaine aldehyde to the corresponding acid.
What are the official names of this protein?
Betaine aldehyde dehydrogenase, BADH.
What is the protein family that this protein belongs to?
Belongs to the aldehyde dehydrogenase family.
Protein: GRPE_CUPTR
Sequence: MEDQKQTPSNQTATPAGDEATSTAAASPETGAPDTAAAAVDDVAAQLAALEAKASEHYDLYMRAVAEGENIRRRAQEDVAKAHKFAIENFADNLLPVMDSLQAALADGSGDIAKLREGVELTARQLAAAFERGKIVELNPVGEKFDPHRHQAISMVPADQEPNTVVTVLQRGYTIADRVLRPALVTVAAPK
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE.  It is the nucleotide exchange factor for DnaK and may function as a thermosensor.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.
What are the official names of this protein?
Protein GrpE, HSP-70 cofactor.
What is the protein family that this protein belongs to?
Belongs to the GrpE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TROPA_IXOSC
Sequence: MVAMEAMAAMEVMVAAMAATADTVASSAASATATEATVAMDTASLSLPLQLSPRSLPQSSLSATAATVATDTVVSSADTEVSDTEDSAATVSATASLSMLPQSSPRSLPQSSLSATAATVDSVTDMADTAMDTKQFISKGNEHFFAASYLCAWADQSAAGS
What is the function of this protein?
Serves as a receptor for ospA protein of B. burgdorferi, the Lyme disease agent.  Required for spirochetal colonization.  Essential for pathogen adherence to the vector.
What are the official names of this protein?
Tick receptor for ospA.
What are the subcellular locations of this protein?
Cell membrane. Note=Predominantly found in the cell membrane. May be an integral membrane or secreted. However, no clear transmembrane domain or signal sequence are predicted by sequence analysis tools.
Protein: YVBX_BACSU
Sequence: MKKWLIIAVSLAIAIVLFMYTKGEAKAAGMTVGYTTGDTASYNSLTKYHTYMNAIATDTFAFEKNGQIIGDAPTKQLTYAKKKKIKTWAVISNYNDAIYDFDGDLASRVMSNKTAKKRFTDQLITLAKKHSYYGINIDFEAVNPEDRAAYSNFIQYVSQALNKKHIKTMVSVPAKSADDKNDDWSWPYDYAKIGKYADFVQVMTYDEHGIWGEPGSVASTNWIKSSLQFSVKKIKANKVIMGIPAYGYDWDVKDGSTSTIREWNELKSLIKKQKAKPAFNKKSGSMTFSYVDKKKHKHVVWYENEKTVQTKSHLAKQYKIAGVSVYALGNESESFWKAIRKGTK
What are the official names of this protein?
Uncharacterized glycosylase YvbX.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 18 family.
Protein: ADCA_STRPN
Sequence: MKKISLLLASLCALFLVACSNQKQADGKLNIVTTFYPVYEFTKQVAGDTANVELLIGAGTEPHEYEPSAKAVAKIQDADTFVYENENMETWVPKLLDTLDKKKVKTIKATGDMLLLPGGEEEEGDHDHGEEGHHHEFDPHVWLSPVRAIKLVEHIRDSLSADYPDKKETFEKNAAAYIEKLQALDKAYAEGLSQAKQKSFVTQHAAFNYLALDYGLKQVAISGLSPDAEPSAARLAELTEYVKKNKIAYIYFEENASQALANTLSKEAGVKTDVLNPLESLTEEDTKAGENYISVMEKNLKALKQTTDQEGPAIEPEKAEDTKTVQNGYFEDAAVKDRTLSDYAGNWQSVYPFLEDGTFDQVFDYKAKLTGKMTQAEYKAYYTKGYHTDVTKINITDNTMEFVQGGQSKKYTYKYVGKKILTYKKGNRGVRFLFEATDADAGQFKYVQFSDHNVAPVKAEHFHIFFGGTSQEALFEEMDNWPTYYPDNLSGQEIAQEMLAH
What is the function of this protein?
Part of the ATP-driven transport system AdcABC for zinc.  Required for transformability (By similarity).
What are the official names of this protein?
Zinc-binding lipoprotein AdcA.
What is the protein family that this protein belongs to?
Belongs to the bacterial solute-binding protein 9 family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor.
Protein: Y1304_METJA
Sequence: MEDSGFNIKYAKLFIKRAEEDLEVAKVLLKTNHYPDSVYHSQQCVEKAVKAVLILNGIIFRRHVVSGVFRNVIYEMKIEDSWKEKLLNLIPKIESLEEHWVMPRYPEPYFGELWNPLEEYTKEDAEECLKDAENVLEVIKDFLKEKYGLKQI
What is the function of this protein?
Putative toxin component of a putative type VII toxin-antitoxin (TA) system.  Its cognate antitoxin might be MJ1305.
What are the official names of this protein?
Putative toxin MJ1304.
Protein: URED_POLAQ
Sequence: MFLAPDNAVKQLFRSLSPSWMAKLSLSYERTPIGTVLKKSLHEGPLRVQKALYPEGDDICHTVIIHPPAGIAGGDTLDIQVAVGKGSHVVLSTPSATKWYKSFKNPATQNVQFELGENAKLDWLPQENLFFKGANSNLITKLNLPASASFIGWDALMLGRHASGEEWSSGHIHLLNEIRRDGQLIWIENGHIDAEDPYSKSLPQLGSWPVCATLLALGPQCSNHLAENLSEMMPWTNSIRAGVTLMPQGIVIVRAVSIDIEMARNFMIDVWSKLRPIIHGVPAQPLRLWAS
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreD.
What is the protein family that this protein belongs to?
Belongs to the UreD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUVA_ACISJ
Sequence: MIGKLTGTLLEKNPPEVLVDCHGVGYEVQVSMSTFYNLPAVGERVSLLTQFIVREDAQLLYGFGTAQERQAFRELIKISGVGPRTALSILSGMGVADLAQAVSLQEAGRLVKVPGIGKKTAERLLLELKGKLGADVGVRAHAANDNQADILQALLALGYNDKEAAAALKALPADVGVSEGIKLALKSLSK
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: RS13_STAA8
Sequence: MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: EFP_CAUVN
Sequence: MKVAASSLRKGSVVDMDGKLYVVLSAENIHPGKGTPVTQLNMRRISDGVKVSERYRTTEQVERAFVDDRNHTFLYSDGDGYHFMNPESYDQLVATEDVIGDAAPYLQEGMTVILSTHNDVPIAIDLPRTVVLEIVDTEPSVKGQTASSSYKPAVLSNGVKTTVPPYITAGTKVVILTEDGSYVERAKD
What is the function of this protein?
Involved in peptide bond synthesis.  Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro.  Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
What are the official names of this protein?
Elongation factor P, EF-P.
What is the protein family that this protein belongs to?
Belongs to the elongation factor P family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL18A_PYRFU
Sequence: MKVKVFRVHGYFEKNGRKFKFTKEYRGIKEEDVKELVYSDIGSKHKVKRNKIFIKEIKEIRPEEAEDIVVRRLSLEL
What are the official names of this protein?
50S ribosomal protein L18Ae, 50S ribosomal protein L20e, 50S ribosomal protein LX, Large ribosomal subunit protein eL20.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL20 family.
Protein: CH10_NEOSM
Sequence: MKVGLKMLHDQVLIRPHEEKDGAGGIYIPDSAKKKPTMGLVVAVGAGAKNSNGTFQPVCVKEGDIVLYRKWAGSEVEHDGVEYVVMKETDIIAIKEGK
What is the function of this protein?
Together with the chaperonin GroEL, plays an essential role in assisting protein folding.  The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.  GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel.
What are the official names of this protein?
Co-chaperonin GroES, 10 kDa chaperonin, Chaperonin-10, Cpn10.
What is the protein family that this protein belongs to?
Belongs to the GroES chaperonin family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RECR_STRPN
Sequence: MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSADDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQTTILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYLSRLLKPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
What is the function of this protein?
May play a role in DNA repair.  It seems to be involved in an RecBC-independent recombinational process of DNA repair.  It may act with RecF and RecO.
What are the official names of this protein?
Recombination protein RecR.
What is the protein family that this protein belongs to?
Belongs to the RecR family.
Protein: PSBF_AMBTC
Sequence: MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR
What is the function of this protein?
This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Cytochrome b559 subunit beta, PSII reaction center subunit VI.
What is the protein family that this protein belongs to?
Belongs to the PsbE/PsbF family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: PA2A6_TROCA
Sequence: MYPAHLLVLLAVCVSLLGAASIPARPLNLYQFGNMIQCANHGRRPTWHYMDYGCYCGKGGSGTPVDELDRCCQIHDDCYGEAEKLPACNYMMSGPYYNTYSYECNEGELTCKDNNDECKAFICNCDRTAAICFARTPYNDANWNIDTKTRC
What is the function of this protein?
PLA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
What are the official names of this protein?
Acidic phospholipase A2 6, svPLA2, Phosphatidylcholine 2-acylhydrolase 6, PLA-6.
What is the protein family that this protein belongs to?
Belongs to the phospholipase A2 family. Group I subfamily. D49 sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: UREE_ALBFT
Sequence: MLTISKLIPQGQGLAPVLLRRASTMELDWDVRQKSRFEATDSAGRQLGVFLPRGTVVRGGDVLVAEDGSLVKVDAAPQPVLRITPCSSHGTAFDLTRAAYHLGNRHVPIELKPDHLKIEPDHVLADMLRAMHLTVLAVNEPFEPENGAYATGGHAHDHDGEPEHVHGPGCQHAH
What is the function of this protein?
Involved in urease metallocenter assembly.  Binds nickel.  Probably functions as a nickel donor during metallocenter assembly.
What are the official names of this protein?
Urease accessory protein UreE.
What is the protein family that this protein belongs to?
Belongs to the UreE family.
What are the subcellular locations of this protein?
Cytoplasm.