PharMolix/UniProtQA huggingface dataset:
Protein: SYR_RICFE
Sequence: MNIFNQLKQDIIAASKQLYNNQEIANTANIETPKDNFNGDLSSNIAMIIAAKESISPREVALKFKEVLTTLPYIASIEIAGPGFINFTIKAESWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYREALGEKITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNENERFKIVKNFAVEKMLDLNRKDLADLGIKHDIFFSEQSLHDKGEIEGTVKLLTGMGLIYEGTLPAPKGKVHEEWDNRVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPESYNNFEEGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASRFHSMWNFGKENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMDRM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EFTS_PSESM
Sequence: MAEITAALVKELRERTGEGMMDCKKALTKAGGDIEKAIDDMRASGAIKAAKKAGNVAAEGAIAIKDDGKAAVIIEVNSQTDFLALQDDFKNFVAASVEKAFADKLTDVAPLIEAQETARLVLVGKVGENVNIRRLKRIEGDVVGSYLHGNKIGVVVTLKGGNVELAKDIAMHVAASNPEFLFPSEVSAEAIEREKSVFLQLNEDKIKGKPAEIVEKMVGGRITKFLAEASLVEQAFVKNPEIKVGDLAKKAGAEIVSFTYFKVGEGIEKPVDNFADEVAAQLAAAKQ
What is the function of this protein?
Associates with the EF-Tu. GDP complex and induces the exchange of GDP to GTP.  It remains bound to the aminoacyl-tRNA. EF-Tu. GTP complex up to the GTP hydrolysis stage on the ribosome.
What are the official names of this protein?
Elongation factor Ts, EF-Ts.
What is the protein family that this protein belongs to?
Belongs to the EF-Ts family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FADB_SHESR
Sequence: MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSGKDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRHRKMSPLTLPKLEAMMSFTTAKGMVFAVAGKHYPAPMAAVSVVEQAATKGRSDALQIEHQAFIKLAKTDVAKALIGIFLNDQLVKGKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLLSAQVARGRSTPEKMAKVLNNITPALDYAPVNHADVVVEAVVEHPKVKAQVLAEVEQYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKPKKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
What is the function of this protein?
Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle.  Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA.  It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate.
What are the official names of this protein?
Fatty acid oxidation complex subunit alpha.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
Protein: LFG2_HUMAN
Sequence: MTQGKLSVANKAPGTEGQQQVHGEKKEAPAVPSAPPSYEEATSGEGMKAGAFPPAPTAVPLHPSWAYVDPSSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNRE
What is the function of this protein?
Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis.  Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation.  May play a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.
What are the official names of this protein?
Protein lifeguard 2, Fas apoptotic inhibitory molecule 2, Neural membrane protein 35, Transmembrane BAX inhibitor motif-containing protein 2.
What is the protein family that this protein belongs to?
Belongs to the BI1 family. LFG subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein. Membrane raft. Postsynaptic cell membrane.
Protein: RL4_MYCLB
Sequence: MAAKVENGSNIRKIDVKTPDGKVDGTIELPAELFDAPANIALMHQVVTAQRAAARQGTHSTKTRGDVSGGGRKPYRQKGTGRARQGSMRAPQFTGGGIVHGPKLRDYSQRTPKKMIAAALRGALSDRARNGRIHAVTELVVGKTPSTKSAKEFLGTLTDRKQVLVVIGRSDETGAKSVRNLPGVHLLSPDQLNTYDVLRADDLVFSVEALNSYIAAQQAAGTSTPEKVSA
What is the function of this protein?
Forms part of the polypeptide exit tunnel.
What are the official names of this protein?
50S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
Protein: RS20_ECO55
Sequence: MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
What is the function of this protein?
Binds directly to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS20 family.
Protein: RL13_AZOVD
Sequence: MKTFTAKPETVKRDWYVVDAAGQTLGRLATEIASRLRGKHKPEYTPHVDTGDYIVVINAEQVRVTGAKSSDKIYYSHSGFPGGIKSISFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYKGAVHPHTAQQPQELKI
What is the function of this protein?
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself.  It is important during the early stages of 50S assembly.
What are the official names of this protein?
50S ribosomal protein L13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL13 family.
Protein: NORR_SALPC
Sequence: MSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNALLIEQLESQNMLPGSSGVFEPIKETHMIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQSSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFYRLSVFPLFVPPLRERGDDVVLLAGYFCEQCRLRLGLSRVVLSPGARRHLLNYGWPGNVRELEHAIHRAVVLARATRAGDEVVLEEQHFALSEDVLPAPSAESFLALPACRNLRESTENFQREMIRQALAQNNHNWAASARALETDVANLHRLAKRLGLKD
What is the function of this protein?
Required for the expression of anaerobic nitric oxide (NO) reductase, acts as a transcriptional activator for at least the norVW operon.  Activation also requires sigma-54.
What are the official names of this protein?
Anaerobic nitric oxide reductase transcription regulator NorR.
Protein: Y637_PSYWF
Sequence: MYFVLSPAKSLNEKDAVSVKVGNYYSQPELIEDAQALMKILKSKEPIDLQALMSISDDLAQLNAQRNQDWAWSEDKPFTEDNAKPAGYLFDGDVYTGLDMYSADKQTVVYLNEHLGILSGLYGVLKPLDMIQPYRLEMGTKLKNEQGDNLYEFWGEHITDVINQRMKDTSEQGEDNILINLASNEYFKAVKKKSLDAAIITPRFEDEKNGKYKVISFYAKKARGLMVRYAADNKITKAEDLKQFDLAGYYYVDELSDDKTWVFRRDEASQ
What are the official names of this protein?
UPF0246 protein PsycPRwf_0637.
What is the protein family that this protein belongs to?
Belongs to the UPF0246 family.
Protein: ATPA_SALNS
Sequence: MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPVDNDGFSAVEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELAKIGSFEAALLAYVDRDHAPLMQEINQSGGYNDEIEGKLKGILDSFKATQSW
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: TRMD_STRA1
Sequence: MKIDILTLFPEMFAPLEHSIVGKAKERGLLEINYHNFRENAEKSRHVDDEPYGGGQGMLLRAQPIFDTIDKIDAQKARVILLDPAGRTFDQDFAEELSKEDELIFICGHYEGYDERIKSLVTDEVSLGDFVLTGGELAAMTMVDATVRLIPEVIGKETSHQDDSFSSGLLEYPQYTRPYDYLGMTVPDVLMSGHHENIRKWRLEQSLRKTLERRPDLLENYAMTDEERLILEKIKTEIERTDTVNEQNNL
What is the function of this protein?
Specifically methylates guanosine-37 in various tRNAs.
What are the official names of this protein?
tRNA (guanine-N(1)-)-methyltransferase, M1G-methyltransferase, tRNA [GM37] methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase TrmD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CLD1_MOUSE
Sequence: MANAGLQLLGFILASLGWIGSIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTGQIQCKVFDSLLNLNSTLQATRALMVIGILLGLIAIFVSTIGMKCMRCLEDDEVQKMWMAVIGGIIFLISGLATLVATAWYGNRIVQEFYDPLTPINARYEFGQALFTGWAAASLCLLGGVLLSCSCPRKTTSYPTPRPYPKPTPSSGKDYV
What is the function of this protein?
Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia.  While some claudin family members play essential roles in the formation of impermeable barriers, others mediate the permeability to ions and small molecules.  Often, several claudin family members are coexpressed and interact with each other, and this determines the overall permeability.  CLDN1 is required to prevent the paracellular diffusion of small molecules through tight junctions in the epidermis and is required for the normal barrier function of the skin.  Required for normal water homeostasis and to prevent excessive water loss through the skin, probably via an indirect effect on the expression levels of other proteins, since CLDN1 itself seems to be dispensable for water barrier formation in keratinocyte tight junctions.
What are the official names of this protein?
Claudin-1.
What is the protein family that this protein belongs to?
Belongs to the claudin family.
What are the subcellular locations of this protein?
Cell junction, tight junction. Cell membrane; Multi-pass membrane protein. Basolateral cell membrane. Note=Associates with CD81 and the CLDN1-CD81 complex localizes to the basolateral cell membrane.
Protein: ANGL7_MOUSE
Sequence: MLRETWLCVILVAFVSHPVWLQKPHKRKTQLKAAGCCEEMRELKAQVANLSSLLGELSRKQESDWVSVVMQVMELESSSKHMESRLSTAESKYSEMNNQIDIMQLQAAQTVTQTSADAIYDCSSLYQKNYRISGVYKLPPDEFLGSPELEVFCDMETSGGGWTIIQRRKSGLVSFYQDWRQYKQGFGSIRGDFWLGNEHIHRLTRQPSRLRVELEDWEGNARYAEYSYFALGNELNSYRLFLGNYSGNVGKDALLYHNNTVFSTKDKDNDNCLDKCAQLRKGGYWYNCCTDSNLNGVYYRLGEHRKHMDGISWYGWHGANYSLKRVEMKIRPEAFKP
What is the function of this protein?
Has a role in the formation and organization of the extracellular matrix.  In the eye, it functions as a mediator of dexamethasone-induced matrix deposition in the trabecular meshwork, the tissue responsible for the outflow of the ocular aqueous humor and for the maintenance of intraocular pressure (By similarity).  Is a negative regulator of angiogenesis in the cornea, and plays a major role in maintaining corneal avascularity and transparency (PubMed:25622036).
What are the official names of this protein?
Angiopoietin-related protein 7, Angiopoietin-like protein 7.
What are the subcellular locations of this protein?
Secreted.
Protein: PLH34_FORAG
Sequence: MKKLLFTFLVSTGTIFFSCQRTYTQSKDYKNASLTIEERVDALLPKMSLEEKVAQMRIFHANIGVEAEGNGNLKLSDKVIEKLKLGIAGIKNPGEHMDPVAAAKFNNDLQKYIIENNRWGIPALFVTESYNGVDAAGSTRFGRPLTSAASFNPQLVNRIWDVVGREARLRGMHMCHSPEADLVRDPRFGRMSEAFGEDTYLTTQMVVNAINGVQGNYDGLGNGTHIGAVAKHFAGYGQVLGGSNFAAIEISPRTLIDEIYPPFEAAVKEAKTLGIMASHGDINGVASHGNPELLTGVLRDQWGFKGYVVSDSNDIARLFYFMNVAESPEEAAQMGLEAGIDIDLYAEDSYAYLPEMVKKNPNLEKLIDRSVRRVLRTKFILGLFDNPYIDIEEVKKGVRANSSLTLAKESDLESIILLKNENKILPLNKNKTTKIALLGPLVKDDTKSMFETVASKHISFVAEKGFHLTDEKGGAPKLLERDENAISKMVNMAKNSDLSILFLGGDEFTSKEAFFNNALGDRATIEPVGAQDELIEKIKALGKPVIVVLKHRRTLAINTISEQADAILDTWDLSEFGDESTARIIFGEVSPSGKLPVTVPRSIGQIPFHYSMKEINYKKGYLFMEDGPLYPFGYGLSYSNFEYSDIKKSNSEMTKDSEIEVSVTIKNTGNVKAKEVVQMYIKDVKGSVIRPDKELKGFEKISLNPGESKKVSFKITPEMLKFTGLKMEKVLESGEYTVMIGTSSVDYKKTSFQLKK
What is the function of this protein?
Glycoside hydrolase probably involved in ulvan degradation (Probable).  Ulvan is the main polysaccharide component of the Ulvales (green seaweed) cell wall.  It is composed of disaccharide building blocks comprising 3-sulfated rhamnose (Rha3S) linked to D-glucuronic acid (GlcA), L-iduronic acid (IduA), or D-xylose (Xyl) (Probable).
What are the official names of this protein?
Putative beta-xylosidase, Glycosyl hydrolase 3 family protein P34, P34_GH3, Polysaccharide utilization locus H protein P34, PUL H protein P34.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 3 family.
What are the subcellular locations of this protein?
Cell outer membrane; Lipid-anchor; Periplasmic side.
Protein: CCG5_MOUSE
Sequence: MSACGRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGIILPQNQSTEVKMSLHSGLWRVCFLAGEERGRCFTIEYVMPMNSQMTSESTVNVLKMIRSATPFPLVSLFFMFIGFILSNIGHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISSINDEMLNRTKDAETYFNYKYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEDMYRPHPGFYRPRLSNCSDYSGQFLHPDAWIRGRSPSDISSDASLQMNSNYPALLKCPDYDQMSSSPC
What is the function of this protein?
Regulates the gating properties of AMPA-selective glutamate receptors (AMPARs).  Modulates their gating properties by accelerating their rates of activation, deactivation and desensitization.  Displays subunit-specific AMPA receptor regulation.  Shows specificity for GRIA1, GRIA4 and the long isoform of GRIA2.  Thought to stabilize the calcium channel in an inactivated (closed) state (By similarity).
What are the official names of this protein?
Voltage-dependent calcium channel gamma-5 subunit, Neuronal voltage-gated calcium channel gamma-5 subunit, Transmembrane AMPAR regulatory protein gamma-5, TARP gamma-5.
What is the protein family that this protein belongs to?
Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein. Postsynaptic density membrane.
Protein: MSRQ_XANC5
Sequence: MAKTSTSVIAAKTLVHAAALAPIALLGWQFWQVWQGGSDALGADPVAEIEHRTGLWALRFLLITLAITPLRQLTGQAVVIRFRRMLGLYAFFYASVHLAAYLTLDLRGFWTQIFEEILKRPYITVGFAAWLLLMPLAITSTQGWMRRLKRNWGRLHTLIYPIGLLAVLHFWWLVKSDIREPALYAGILAVLLGWRVWKKLSARRTTARRSTPPPATPR
What is the function of this protein?
Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons.  Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms.  MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation.  MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain.
What are the official names of this protein?
Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, Flavocytochrome MsrQ.
What is the protein family that this protein belongs to?
Belongs to the MsrQ family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: MRAZ_SHELP
Sequence: MFRGASAINLDAKGRIAIPKRYRERLHVDFNSQLVITVDFDAACLLIYPLEAWKAIEAKLLLLSDTQGPERAMKRLLLGYAHECELDSNGRLLLPPPLRQYANLDKHAMLVGQLNKFELWDEAAWQQQIELSRETIQSDAFANSERLADFSL
What are the official names of this protein?
Transcriptional regulator MraZ.
What is the protein family that this protein belongs to?
Belongs to the MraZ family.
What are the subcellular locations of this protein?
Cytoplasm, nucleoid.
Protein: HIS8_YERE8
Sequence: MSQSTNVTELARANVRALTPYMSARRLGGNGDVWLNANEYPLATEYQLTAQTFNRYPECQPKLVIERYAAYAGLATDQVLVSRGADEGIELLIRAFCEPAQDAILFCPPTYGMYAVSAETFGVELRTVPTKADWQLDLPAIKASLDRVKLIYICSPNNPTGNLINPADLRAVLELAQGRAIVAIDEAYIEFCPQASVSSWLKDYPNLVILRTLSKAFALAGLRCGFTLANSDIIQLLLKVIAPYPLSTPVADIAAQALSPLGLEQMRQRVSEVTANRAWLQNALQECACVEQVFTSESNYLLARFTASSSVFKTLWDQGIILRDQNKQPSLSNCLRITIGTRQECERVIAALAPLPGVDSPNSTNTASLRKETI
What are the official names of this protein?
Histidinol-phosphate aminotransferase, Imidazole acetol-phosphate transaminase.
What is the protein family that this protein belongs to?
Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
Protein: YCU1_YEAST
Sequence: MNANIWVAASDGNLDRVEHILRESKGAMTPQSKDINGYTPMHAAAAYGHLDLLKKMCNEYNGDINVLDNDGDTPLHHVEDVATARLIVEELGGDFTIRNVEGQTPYDSFVENGEDGELIEYMRIKSGVADVHGVDGVQGEGVIDSKLLEEFKDNVRYTLENDPEEGADEATLQRRRQLEQIITGDNAEEELERYIRAMVREQMLGQGSMAGSGDEPDSKRRK
What are the official names of this protein?
Ankyrin repeat-containing protein YCR051W.
Protein: ENGB_WOLWR
Sequence: MAKQITSNCNFIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLIDSKVGLKEIDKDFIYWLICNNINFNVVLTKIDKVSQKSLGAVIEDIQRWINNENVSIHQMSIRVKHKITKVRDEFFKFTR
What is the function of this protein?
Necessary for normal cell division and for the maintenance of normal septation.
What are the official names of this protein?
Probable GTP-binding protein EngB.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
Protein: UREF_HELPY
Sequence: MDKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESALQQDLKKILGVEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGEFFNAYAQKTKDPTHATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCTASVQNDIKAMQHESLYSRLYMS
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreF.
What is the protein family that this protein belongs to?
Belongs to the UreF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DNLI_STAMF
Sequence: MPFRELADTFERIEIITSRTQMTVLLVNLFKKTPPEIIDKVVYLLQGRLWPDWKGLPELGVGEKMLIKAIALATQSTESEVESLYKSLGDLGKAAEKLKAIYEEKLKKGAMSILAFVPVKRELTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLGIGDATIMDALAIVYGGGAHARPIVERAYNLRADLGHIAKILATQGLNALKGIKPQVGIPIRPMLAERLNNPVEILKKVGGIAFVEYKYDGERAQIHKLGDKIWIYSRRLENITHQYPDVVDYARKYIKANEAIVEGEIVAYDPDTGELRPFQELMHRKRKHDIHIAIKEVPVKVYLFDLLYVDGEDYTLKPLPERRAKLVEIIEQTETFQIAEYIRTNNPDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIGAFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHPRVVARMKPDVWVTPALVAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEMYKRQLKKLSE
What is the function of this protein?
DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.  Can use both ATP and ADP.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [ATP/ADP].
What is the protein family that this protein belongs to?
Belongs to the ATP-dependent DNA ligase family.
Protein: RL21_PROMH
Sequence: MYAVFQSGGKQHRVSEGQTIRLEKLEVATGETIEFDTVMMVADGDNIQIGAPILEGVKVKAEVVAHGRGEKVKIVKFRRRKHSRKQQGHRQWFTDVKITGIA
What is the function of this protein?
This protein binds to 23S rRNA in the presence of protein L20.
What are the official names of this protein?
50S ribosomal protein L21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL21 family.
Protein: RL23_STAS1
Sequence: MEARDVLKRPVITEKSSAAMAEDKYTFDVDTRANKTQVKIAVEEIFDVKVDNVNIINYKPKKKRMGRYQGYTNKKRVAIVKLKEGSIDLFN
What is the function of this protein?
One of the early assembly proteins it binds 23S rRNA.  One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.  Forms the main docking site for trigger factor binding to the ribosome.
What are the official names of this protein?
50S ribosomal protein L23.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL23 family.
Protein: MCBR_ECOLI
Sequence: MPGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQQAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELREHIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR
What is the function of this protein?
Important for biofilm formation.  Represses expression of McbA by binding to its promoter region, which prevents colanic acid overproduction and mucoidy.
What are the official names of this protein?
HTH-type transcriptional regulator McbR.
Protein: SMG_PHOPR
Sequence: MMDILMYLFETYIQSDVELLVDQDELSDELSRAGFHQDDIYKALNWLEKLAALQETETIPYMNNSAITSIRVYIPQEMARMDVTCRGFLTYLEQIHVLSADTREMVIDRVMELETSDFVLDDLKWIILMVLFNAPGNENAYTQMEELLYGAEDGYIH
What are the official names of this protein?
Protein Smg homolog.
What is the protein family that this protein belongs to?
Belongs to the Smg family.
Protein: LIPL_GEOKA
Sequence: MSHELLRQPKWRVIDQSHFGPLFDAKQSFAIDDALCTAVGAGQSDAVVRTWVHENTVVLGAADTKLPYIDEAISFLRQEGYRVVVRNSGGLAVVLDSGVLNISLIFPETKNTIAIEQGYEAMYALMAAMLASYGARVEAGEIVGSYCPGSYDLSIGGKKFAGISQRRVRGGVAVQIYLCVNGSGAARAELIRRFYELGRQGEKTKFAYPDVVPTVMASLSELLGCELSIDELLVALWRTLQSFGGELYSSALENGEWNWYEQYWARIVERNETALKGELLAGE
What is the function of this protein?
Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes.
What are the official names of this protein?
Octanoyl-[GcvH]:protein N-octanoyltransferase, Octanoyl-[GcvH]:E2 amidotransferase.
What is the protein family that this protein belongs to?
Belongs to the octanoyltransferase LipL family.
Protein: TRPD_CHLPD
Sequence: MPQKKLLNMLMAGKDLAREEMTLCMNNIMDGAFSDIVLAALLALLQKKGVTADEAAGAYASIMARATLCKLDEDAVDTCGTGGDNTGTFNISTAAAIIACGAGVSIAKHGNRSMTSQCGSADVLEALGFAIDLPPSATEELFRQTGFAFLFAPMYHPSMKAVAHVRRELGIRTIFNMLGPLLNPAGVKRQLVGVFEPELMDLYGTVLLATGCRHSLIVHGETETGAAFDEPSISGPTHILELHEGVMARHIVHPEDFGFIRCPIEDLAGGNREENAIIIRNILDGSATRAKTEAALYAAAMTCYVSGKASCIDEGVCMASDSLESGQASCKFTAILQLNRELSGKHKALIN
What is the function of this protein?
Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
What are the official names of this protein?
Anthranilate phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the anthranilate phosphoribosyltransferase family.
Protein: MUTL_STAAW
Sequence: MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQRQNTENNQEKTFSSEESNSKPFMVENQNDEIVIREDSYNPFVTKTSESLIADDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM
What is the function of this protein?
This protein is involved in the repair of mismatches in DNA.  It is required for dam-dependent methyl-directed DNA mismatch repair.  May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
What are the official names of this protein?
DNA mismatch repair protein MutL.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutL/HexB family.
Protein: SLYX_PSEFS
Sequence: MDLQDRVTDLESRLAFQDDTIETLNDILVTQQRAVERLQLQMTALLKRQEEMGGQFETSEEEAPPPHY
What are the official names of this protein?
Protein SlyX homolog.
What is the protein family that this protein belongs to?
Belongs to the SlyX family.
Protein: XYLA_SALTI
Sequence: MQAYFDQLDRVRYEGPQSTNPLAFRHYNPDELVLGKRMEDHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALELAKRKADVAFEFFHKLNVPFYCFHDVDVSPKGASLKEYKNNFAQMVDVLAAKQEQSGVKLLWGTANCFTNPRYGAGAATNPDPEVFSCAATQVVTAMNATHKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKMGFQGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIATAIALGIFGSVDANRGDAQLGWDTDQFPISVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMVEDGELDKRVAKRYAGWNGELGQQILKGQLSLGELAQYAEQHHLAPVHQSGHQELLENLVNRYLFDK
What are the official names of this protein?
Xylose isomerase.
What is the protein family that this protein belongs to?
Belongs to the xylose isomerase family.
What are the subcellular locations of this protein?
Cytoplasm.