PharMolix/UniProtQA huggingface dataset:
Protein: RIMO_LEPBP
Sequence: MPKSLENTNETPKSFFITTLGCPKNTVDSMAMHQSLLKEGLLPAAGPEASDFHLVNTCTFIQDATKETIQTILDSIDIKKQNKQKLVVVGCFAERAGKEISDDLPEVDLHFGTGKYDKAGEILRKNFPLEFKDLTEFNEDLLERLTTSKGIENYSKPYSYVKISDGCNRGCHFCIIPNLRGKYRDTDSNDVLEQTKLAVKAGSKEICLVSQDTVFYGKDTDKLMDLVRSVAAVEGLEILRLLYLYPDKKTEKLLDLYREIPKIAPYLESPLQHVSKSVLKSMNRTGDYEFFKSLFQKARDIRPDLEIRTSFILGFPGETMEDVEEIIRFVEDVKPEKVNLFPYSPQEGTKGATMDGQLKDKEIARRVNLVREAYLGTLKTIHQNRIGKIYPCVVDEVLDDGAIVRRLQDAPEIDEVVYVETKDLKLGQFGKVRVDSFYELDMSGTWVD
What is the function of this protein?
Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12.
What are the official names of this protein?
Ribosomal protein S12 methylthiotransferase RimO, S12 MTTase, S12 methylthiotransferase, Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase, Ribosome maturation factor RimO.
What is the protein family that this protein belongs to?
Belongs to the methylthiotransferase family. RimO subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MTNX_NEILA
Sequence: MFKIIDLFAGIGGIRLGFEQAFDDVRCVFSSEIDKYAVQTYQANHGGETVCGDITQTDVADIPDHDILSAGFPCQPFSQAGLKKGFADTRGTLFFDIERILLAKKPQAFLLENVKQLKGHDKGRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVGFLNHDVDFRFPQPIGQATAVGDILEAYPDEKYTISDKLWQGYQRRKAENRAAGKGFGYGLFNAESAYTNTISARYYKDGSEILIEQPGKNPRKITPPEAARLQGFPDSFQIPVSDAQAYRQFGNSVCVPVIRAIAEQMKAALSAVSDRKV
What is the function of this protein?
A methylase, recognizes the double-stranded sequence 5'-CCNGG-3' and methylates C-2 on both strands.  May be the equivalent of dcm in this bacteria, or it may protect the DNA from cleavage by the putative NlaXP endonuclease.
What are the official names of this protein?
Type II methyltransferase M.NlaX, M.NlaX, Cytosine-specific methyltransferase NlaX.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
Protein: CBIM_METST
Sequence: MHIMEGFLPPLWCLIYYIICIPFIVYGIMQIRKVTAESDEAMPMLALSGAFMFILSSLKMPSVTGSCSHPCGNGFGAVFFGPAVVGVLSVIVLVFQAVILAHGGITTLGANVLSMGIIGPLCGYAVWLGLRKLNVNDEIAMFFTAFVADLMTYVVTAIELSLAFPKPDFFTALVTFLGIFAVTQIPLAIAEGILTMVIYRFIKQQKPDILVKLRVISKEEAGVN
What is the function of this protein?
Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
What are the official names of this protein?
Putative cobalt transport protein CbiM, Energy-coupling factor transporter probable substrate-capture protein CbiM, ECF transporter S component CbiM.
What is the protein family that this protein belongs to?
Belongs to the CbiM family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RL11_NANEQ
Sequence: MGEIAIRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYKIIVGLPPTSALLMKAAGVTRGPQRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKEVDEGKWDHIINE
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL11 family.
Protein: RNP3_PYRAB
Sequence: MAGGGGLKFVEMDVRNDDAYKLAKEWFDEVVFSVKFQDSIDKELLREAERNYGLVAILLVNPRLSIVKEAVQRFKQNYLIYVESSDLRTIRYSIERGVDAIISPWVGRKDPGIDHTLARMMAKKGVALGFSLRPLLEASPYDKANILKFMRKAWQLTNKYKVKRFITSSANEKWHIRWPRDLATLGIIIGMEVQQAKAALSTYPDIILKRLK
What is the function of this protein?
Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
What are the official names of this protein?
Ribonuclease P protein component 3, RNase P component 3, Rpp30.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic/archaeal RNase P protein component 3 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CLPX_STRPZ
Sequence: MAGSRTNDIKVYCSFCGKSQDDVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLDVLNQYVVGQDRAKRALSVAVYNHYKRVSFTESRDDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTKNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLKTSDLIRILTEPRNALVKQYQALLSYDGVELEFDKAALEAIATKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGKSKPVLETA
What is the function of this protein?
ATP-dependent specificity component of the Clp protease.  It directs the protease to specific substrates.  Can perform chaperone functions in the absence of ClpP.
What are the official names of this protein?
ATP-dependent Clp protease ATP-binding subunit ClpX.
What is the protein family that this protein belongs to?
Belongs to the ClpX chaperone family.
Protein: CAPZB_CANGA
Sequence: MDEKYDAALDLLRRLNPNNLTENLQRIIGLEPELAEDLLSSIDVPLKVQQDSKQSGRPFLCCDYNRDVDSYRSPWSNEYFPELSAEDLQESPFPSESLRSLEVLANDSFDVYRDLYYEGGISSVYLWDLDEEGEFAGVVLFKKEGSNKESWDSIHVIEATKGNDDETFTYRLTSTIILALDNKQNDTSLAGNLTRQTEKEAKIDTSNTDISHITNLGTLIEDIESQLRTQLEIVYFEKTRDIFHQTRSQKSTTDSQEQQQKEVIKGLQNL
What is the function of this protein?
F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends.  Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (By similarity).
What are the official names of this protein?
F-actin-capping protein subunit beta.
What is the protein family that this protein belongs to?
Belongs to the F-actin-capping protein beta subunit family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton. Nucleus. Note=Septum.
Protein: SP30L_HUMAN
Sequence: MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGKQLE
What is the function of this protein?
Functions as transcription repressor; its activity is marginally lower than that of isoform 1.
What are the official names of this protein?
Histone deacetylase complex subunit SAP30L, HCV non-structural protein 4A-transactivated protein 2, Sin3 corepressor complex subunit SAP30L, Sin3-associated protein p30-like.
What is the protein family that this protein belongs to?
Belongs to the SAP30 family.
Protein: EX7L_FRASN
Sequence: MPLTSTPDEPLPVRTISRALGDWISRLGRVWVEGQVTEISRRPGMNTVFLTLRDPVADVSLRVTCPRAVCDAVGPGLVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLERLKATLAAEGLFAASRKRRLPFLPTAVGLITGRASAAERDVIENARRRWPAVRIELREVAVQGPLAVSQILDALSDLDADRAVEVIVIARGGGSLEDLLPFSDEALLRAVVAARTPVVSAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVSEQSALVEALRSRARRVLAHRLDLERRRLADLRARPVLAAPLREIDRREQTVGALRSRSLRCLTHAVDVAERDLVHAAARMRALSPAATLERGYALIQNADGAVIRSPAEIEAGDPLTVRVAGGTFAARAE
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 large subunit, Exodeoxyribonuclease VII large subunit, Exonuclease VII large subunit.
What is the protein family that this protein belongs to?
Belongs to the XseA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NU3M_PERME
Sequence: MNMLMALLVNITLSTLLIIVAFWLPQLNLYTEKANPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMYNINIMMLTAFILVSVLALGLAYEWVQKGLEWTE
What is the function of this protein?
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) which catalyzes electron transfer from NADH through the respiratory chain, using ubiquinone as an electron acceptor.  Essential for the catalytic activity of complex I.
What are the official names of this protein?
NADH-ubiquinone oxidoreductase chain 3, NADH dehydrogenase subunit 3.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 3 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: PRMC_BUCBP
Sequence: MKIKNWLKYASLKLKKTSSSPNLDAEILLSYVLKKCRTWIISNDFIKLTYDNLIDLNVLLQRRMNSEPISYLIHVKEFWSLPFLVSNSTLIPRPDTEILVEKALIYLKNLSNAKVLDLGTGCGSIALALASERLDCKIIGIDCVKESISIASKNAKILKLKNVSFLHSIWFSKVDNMFDMIVSNPPYLSFSEMKNVDKEVLFEPFIALFSSENGLGAIRHIIKYSKKYLYSKAWLLVEHGWKQKDKVQSFFYKYSFININTYRDYCDSDRVTVGQKQ
What is the function of this protein?
Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif.
What are the official names of this protein?
Release factor glutamine methyltransferase, RF MTase, N5-glutamine methyltransferase PrmC, Protein-(glutamine-N5) MTase PrmC, Protein-glutamine N-methyltransferase PrmC.
What is the protein family that this protein belongs to?
Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
Protein: TBC8_CAEEL
Sequence: MQMFRHSSADMWRAKKPTLERRSTDGRRSSIVDWINGLSDNNNYKSDHWVEKHDEGCERMTRNGSVCAVEESEPDVPTQHREVLLTKLKIEIKNIMAEHGAKKYLNLNSPYVTSLCIAVDACIMDGLRRRLLTLFNSPSSMSLLQIIAKSNGPAQQVLDQTREIEELRTSAIPVHLIWIREALYLKSLSTIINHFIDSKSVRRYYDNSALLLDPVKGRLVATLMMAPCMVTYRRMSNRIEQEATAEELVEGATRGSTSTVPSRPPLSITRQVSSIAASVERNGSVSRDYVFSLHHSCKSTLLYGKNNVCVAMNGSDFAKGYMSLQKFYDGNLSLKWVPNQLMHASSQPSSGHSNNGEFTNIWKNTINIEMQDIIYIHLHQKDEISPTCLTFVNCEGVQSAPFQLPAGQHSIAFLSSLETGLAPLLRLDPPLWVGTTKEKILPRLRKRSTAVANPAMLDYVFRLVRTSGVEPAPEDIEDPLAPTSHSPPIHDNCVSLPNSPYIVDNVDSIVNFQIGTACQSMRNQIMARAFYGWLTYVRHLRTIRTHLLHLVDTKTLICDDDCDPVDEKFWKQARAEPTEENEKEFLKRVYWRGIEGINTKEVRRMAWPYLLGLFEWNESPESRLEQFTSQYWQDIEEWRVLEAEVRRRDEEAFRAARARKAASPVREESCDVFEDPNEPTCSQHYDRENLITLFRANLHRIDKDVERCDRNLMFFSNKDNLESLRRVMYTYVRRNLEEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLRQRGKFPQRPGMSKCLLNLRSLIQVVDPQIYALISDIDYAQALSFAFRWFLLDFKRELSYECTYKVWEVIWAAQRLRITDDFAIFFGLATITNYHDVLITNNFDYTDMIKFFNEMAERHDCSRLLSSARTHVKCLQNLVQHLK
What is the function of this protein?
Interacts with numerous Rab family members, functioning as Rab effector for some, and as GTPase activator for others (PubMed:22654674).  GTPase activator for rab-2 (PubMed:22654674).  In association with ric-19 activates rab-2 during dense core vesicle maturation in cholinergic motoneurons (PubMed:22654674).
What are the official names of this protein?
Rab GTPase-activating protein tbc-8, TBC domain family member 8.
What is the protein family that this protein belongs to?
Belongs to the RUTBC family.
What are the subcellular locations of this protein?
Golgi apparatus, trans-Golgi network. Early endosome. Cytoplasmic vesicle membrane; Peripheral membrane protein. Note=Co-localizes with ric-19 at cytoplasmic vesicle membranes in neurons.
Protein: Y205_MYCTO
Sequence: MSASLDDASVAPLVRKTAAWAWRFLVILAAMVALLWVLNKFEVIVVPVLLALMLSALLVPPVDWLDSRGLPHAVAVTLVLLSGFAVLGGILTFVVSQFIAGLPHLVTEVERSIDSARRWLIEGPAHLRGEQIDNAGNAAIEALRNNQAKLTSGALSTAATITELVTAAVLVLFTLIFFLYGGRSIWQYVTKAFPASVRDRVRAAGRAGYASLIGYARATFLVALTDAAGVGAGLAVMGVPLALPLASLVFFGAFIPLIGAVVAGFLAVVVALLAKGIGYALITVGLLIAVNQLEAHLLQPLVMGRAVSIHPLAVVLAIAAGGVLAGVVGALLAVPTVAFFNNAVQVLLGGNPFADVADVSSDHLTEV
What are the official names of this protein?
Putative transport protein MT0215.
What is the protein family that this protein belongs to?
Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RS6E_HALMA
Sequence: MAEFTVAVSDPEDGHTYQIDVDGQDANRFIGRELGDEVDGGAVGLDGYSLELTGGSDTSGRPMRPDVRGVTTKEIMSDGGVGFEPTTDGERKRITVRGREVSDDTRQINAKITARGSDDVADLLGDDDE
What are the official names of this protein?
30S ribosomal protein S6e, HS13.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eS6 family.
Protein: MCC07_ARATH
Sequence: MGTQFRKALTLTVTNFSQKSSPINSPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPKSLGLNWKRRANFYFVLLNQSGKELHRTPEIGDQWFCDDSLSWGFPQTLPRKKLLDKIFLDNDRFNIEIYIKVIEVVEGYHMFPASFTNKLLRSSLEYPDKSEKETVDINGFKVLSSQVTSVKRIFEEHPDIAEDFRSKNQVVKTEYMSVLLRVIETMAKPPQSISETELSNVHSELTELTEVGFKLEWLKAKLEEVCVAFKKANADGCRIQQLEEHVKNLEQTVSDLKVEMDKEKAKSTAKVLSLEDTLSDLKTELGKEKAKNATATDKFLLLKDTYSDLKVELEKEKAKSTSAAAKVLSLKEALSDLKVELDDQKIVNSATTANVLSWEDDDDLFSHTNCLGIQQKTNAYKRIN
What are the official names of this protein?
MATH domain and coiled-coil domain-containing protein At2g42465, RTM3-like protein At2g42465.
Protein: DPH3_ASHGO
Sequence: MSVYDEVEIEDMTFDPDTQLFTYPCPCGDRFQISIDDMCDGEDIAVCPSCSLMIKVVYELHDLQEYYDEAGVEPPVPLVASA
What is the function of this protein?
Required for the first step of diphthamide biosynthesis, a post-translational modification of histidine which occurs in elongation factor 2.  DPH1 and DPH2 transfer a 3-amino-3-carboxypropyl (ACP) group from S-adenosyl-L-methionine (SAM) to a histidine residue, the reaction is assisted by a reduction system comprising KTI11/DPH3 and a NADH-dependent reductase, predominantly CBR1.  Acts as an electron donor to reduce the Fe-S cluster in DPH1-DPH2 keeping the [4Fe-4S] clusters in the active and reduced state.  Restores iron to DPH1-DPH2 iron-sulfur clusters which have degraded from [4Fe-4S] to [3Fe-4S] by donating an iron atom to reform [4Fe-4S] clusters, in a manner dependent on the presence of elongation factor 2 and SAM.  Associates with the elongator complex and is required for tRNA Wobble base modifications mediated by the elongator complex.  The elongator complex is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s 2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine).
What are the official names of this protein?
Diphthamide biosynthesis protein 3.
What is the protein family that this protein belongs to?
Belongs to the DPH3 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: BGAL_BIFAA
Sequence: MSARRNFEWPELLTADGRGIAFGGDYNPDQWSEDIWDDDIRLMKQAGVNTVALAIFSWDRIQPTEDRWDFGWLDRIIDKLGNAGIVVDLASATATAPLWLYESHPEVLPRDKYGHPVNAGSRQSWSPTSPVFKEYALTLCRKLAERYGTNPYVTAWHMGNEYGWNNREDYSDNALEAFRAWCRRKYGTIDALNQAWGTTFWGQEMNGFDEVLIPRFMGADSMVNPGQKLDFERFGNDMLLDFYKAERDAIAEICPDKPFTTNFMVSTDQCCMDYAAWAKEVNFVSNDHYFHEGESHLDELACSDALMDSLALGKPWYVMEHSTSAVQWKPLNTRKRKGETVRDSLAHVAMGADAINFFQWRASAFGAEAFHSAMVPHAGEDTKLFRQVCELGASLHTLADAGVQGTELAHSDTAILFSAESEWATRSQTLPSMKLNHWHDVRDWYRAFLDAGSRADIVPLAYDWSSYKTVVLPTVLILSAADTQRLADFAAAGGRVVVGYATGLIDEHFHTWLGGYPGAGDGLLRSMLGVRGEEFNILGAEAEGEPGEIRLSSADDSAALDGTTTRLWQNDVNVTGEHAQVLATYAGEEADEWELDGTAAVTRNPYGSGEAYFVGCDLDVADLTKLVRAYLAASSQENADVLHTVRASADATFDFYLPRGKKTVELQGIEGEPVILFQTDREEKPGSYTVRRNGVLVVRR
What is the function of this protein?
Involved in the hydrolysis of transgalactooligosaccharides (TOS).  Highly active towards Gal(beta1-4)Gal and Gal(beta1-4)-Gal-containing oligosaccharides.  Low activity towards Gal(beta1-3)Gal, lactose and Gal(beta1-3)GalOMe.  No activity towards Gal(beta1-6)Gal, Gal(beta1-4)Man, Gal(alpha1-4)Gal, Gal(alpha1-3)Gal(beta1-4)Gal, lactulose, 3'fucosyllactose, lacto-N-fucopentaose I, lacto-N-fucopentaose II, cellobiose, maltose or sucrose.  No transglycosylation activity is found at high substrate concentrations (100 mg/ml) and only low transglycosylation activity at lower substrate concentrations (10 mg/ml).
What are the official names of this protein?
Beta-galactosidase BgaB, Beta-gal, Beta-Gal II.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 42 family.
Protein: COPB2_DROME
Sequence: MPLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVGREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIADGTEIKDGERLPVATKDMGACEIYPQTIAHNPNGRFVVVCGDGEYIIYTSMALRNKAFGSAQEFVWALESNEYAIRENNGTVRLFRNFKERKSFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEVQPKNVFWNESGSLVCLATDDSYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYTNSVNRINYYVGGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADVVLPTIPKEHRTRVAHFLEKQGFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGAAGSAQGHHNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTYLPSQMSRIVELWREKLGKVNEKAGQSLADPAQYTNLFPGLGDALRVEQHLQEERARKAPARLAANLPLNSERHPLQELFAAEQGAAGQHLEEKVKPAYVPAQAVVSSSQVAEPTSAADDDDDLDLEIDGITLDDNIDTTDVNLDDDFLSDD
What is the function of this protein?
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.  Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
What are the official names of this protein?
Coatomer subunit beta', Beta'-coat protein, Beta'-COP.
What is the protein family that this protein belongs to?
Belongs to the WD repeat COPB2 family.
What are the subcellular locations of this protein?
Cytoplasm. Golgi apparatus membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasmic vesicle, COPI-coated vesicle membrane; Peripheral membrane protein; Cytoplasmic side. Note=The coatomer is cytoplasmic or polymerized on the cytoplasmic side of the Golgi, as well as on the vesicles/buds originating from it.
Protein: SCO1_SCHPO
Sequence: MFRRGLVFSRHCHYSLIRPRFPLNRTCLARFADGRKNLATDNRTQTYQSWRGMISIRALLLAAATSVGLYAYFQHEKKKVLERQNDKVLATIGRPQLGGAFSLIDHHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGDVVYPIFITCDPARDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFSTPKNIDPKKDDYLVDHSVFFYLMDPEGKFIEVFGRNSTSEDLARAIGSYYLSRKKQK
What is the function of this protein?
Acts as a copper chaperone, transporting copper to the Cu(A) site on the cytochrome c oxidase subunit II (COX2).
What are the official names of this protein?
Protein sco1.
What is the protein family that this protein belongs to?
Belongs to the SCO1/2 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane.
Protein: RSMH_BACCQ
Sequence: MFNHVTVLLKETVDGLDIKPGGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNAKEKFSSYGEQFITVKSNFRYLSEKLQELGITEVDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYRENKAIETTGELVELIKEGIPAPARRTGGHPAKRVFQAIRIAVNDELKVFEEALESAIEMVKPGGRVSVITFHSLEDRICKTTFKRNSTTPQLPPGLPIIPDEFKPKLKLITRKPILPSDIELEENNRARSAKLRIAEKR
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SCP_SCYPA
Sequence: MAYSWDNRVKYVVRYMYDIDNNGYLDKNDFECLALRNTLIEGRGEFNSDAYANNQKIMSNLWNEIAELADFNKDGQVTVDEFKQAVQNLCCGKSFDGFPPCFKTVIGRLFKTIDINGDGLAGVDEYRLDCISRSAFSSVKEIDDAYAKLCTDDDKKAGGISLNRYQELYAQFISNPDEKCNAVYLFGPLKEVQ
What is the function of this protein?
Like parvalbumins, SCPs seem to be more abundant in fast contracting muscles, but no functional relationship can be established from this distribution.
What are the official names of this protein?
Sarcoplasmic calcium-binding protein, SCP.
Protein: Y811_TREPA
Sequence: MAGIVSAFVTFFYRFISFTTSYVQCVRSIIAEHAGPHGWFL
What are the official names of this protein?
Uncharacterized protein TP_0811.
Protein: PFKA3_ARATH
Sequence: MSTVESSKPKIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSVPQKIVVHKDGPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTTKIVDSIQDRGINQVYIIGGDGTQRGASVIFEEIRRRGLKVAVIGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGEGGLFEYIEKRLKESGHMVLVIAEGAGQDLMSKSMESMTLKDASGNKLLKDVGLWLSQSIKDHFNQKKMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYISGLVNGRQTYIPFYRITEKQNHVVITDRMWARLLSSTNQPSFLGPKDVFDNKEKPMSALLDDGNCNGVVDVPPVTKEITK
What is the function of this protein?
Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
What are the official names of this protein?
ATP-dependent 6-phosphofructokinase 3, ATP-PFK 3, Phosphofructokinase 3, Phosphohexokinase 3.
What is the protein family that this protein belongs to?
Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYR_RALSO
Sequence: MLPSHKQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQARARGFKPGDTGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENIEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYLESSLYADGKVQQTVDALIAAGKTYEQEGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDLGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGAPNWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWHAREGGDAASLAGADLAAVAGPEASPQAVALVQRIAAFPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADRVLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQKM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AROB_ACIBT
Sequence: MQTLHVELGERRYPIFIGSQLDPKQLLEPYIHGQQVMIVSNVTVAPLYLSHYQEALESLGKTVATCILPDGEKYKDIQHLNLIFDALLEAGFNRDCTVLALGGGVIGDMAGFASACFQRGVYFVQVPTTLLSQVDSSVGGKTGINHPLGKNMLGAFQQPQVVLADMAQLNTLPERELSAGLAEVIKYALLGDEDFLVWLEENMDGLVARDADLLAEAVYRSCAHKARIVANDEKEQGERALLNLGHTFGHAIESYLGYGTWLHGEAVATGMVMAADLSQRLGWISNEDVARTKKIIQRANLPISCPQIPLDDFLGYMAHDKKVLNGQLRLVLLKQLGQAVITKNFDVELMKQAILANQHG
What is the function of this protein?
Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
What are the official names of this protein?
3-dehydroquinate synthase, DHQS.
What is the protein family that this protein belongs to?
Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: 3S13_NAJHA
Sequence: MICYKQQSLQFPITTVCPGEKNCYKKQWSGHRGTIIERGCGCPSVKKGIEINCCTTDKCNR
What is the function of this protein?
Binds to muscle nicotinic acetylcholine receptor (nAChR) and inhibit acetylcholine from binding to the receptor, thereby impairing neuromuscular transmission.
What are the official names of this protein?
Short neurotoxin 3, Toxin CM-10, Toxin V-NH-I1.
What is the protein family that this protein belongs to?
Belongs to the snake three-finger toxin family. Short-chain subfamily. Type I alpha-neurotoxin sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: FPG_SERP5
Sequence: MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDQPVLSVQRRAKYLLIELASGWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGAWLWCDDLATSNVLAHLGPEPLSEAFTGAYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAGILPDRPAGSLSKVEAEVLVATIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRAGEPCRACGTPIESAKHGQRSTFFCPRCQR
What is the function of this protein?
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents.  Acts as DNA glycosylase that recognizes and removes damaged bases.  Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG).  Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand.  Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
What are the official names of this protein?
Formamidopyrimidine-DNA glycosylase, Fapy-DNA glycosylase, DNA-(apurinic or apyrimidinic site) lyase MutM, AP lyase MutM.
What is the protein family that this protein belongs to?
Belongs to the FPG family.