PharMolix/UniProtQA huggingface dataset:
Protein: MNME_BRUME
Sequence: MSEIGSYHDTIFALSSGRLPSGVAVIRISGPKTRFVYETICQAIPEPRHAALLTFRSRNGDAIDRGLTLFFPAPHSFTGEDCAEFHLHGGKAVVEKMLAVLGELPGCRIAEAGEFTRRAFANGKMDLTIAEGLADLIAAETEGQRRLAMQVASGNQRKLYSEWRQRLINARAFIEAELDFADESDVPGSVSMQVWQQLSALKHEIEHHIASGKRAAMLRDGLHVVIVGAPNAGKSSLLNFLAGRDVAIISEEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGPVSVTVEKIEAETWLIGTKADLGGSASGLWKYHISTMTGSGLEQLLDALQAFAEAKIGQIEDAVPTRQRHINLLRATIEEIEKAIEGDDLPLELRAENMRLASQFLGRITGDVDVEEILDVIFSQFCIGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KAD_XANC5
Sequence: MRLVLLGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERISKALGR
What is the function of this protein?
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP.  Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
What are the official names of this protein?
Adenylate kinase, AK, ATP-AMP transphosphorylase, ATP:AMP phosphotransferase, Adenylate monophosphate kinase.
What is the protein family that this protein belongs to?
Belongs to the adenylate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TYPH_ECO55
Sequence: MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQDAAKAVKAAIKLADKAPESTPTVYRRISE
What is the function of this protein?
The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.
What are the official names of this protein?
Thymidine phosphorylase, TdRPase.
What is the protein family that this protein belongs to?
Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
Protein: OTNK_PECAS
Sequence: MIKLGVIADDFTGATDIASFLVNNGLPTVQLNGVPPSDFKVDTQAVVISLKSRSCSAEQAVADSLNALAWLQQQGCQQFYFKYCSTFDSTAKGNIGPVTDALLEQLGETQTIISPALPVNGRTVYQGHLFVMDQLLSESGMRHHPVTPMTDSNLMRVMEQQAAGQCGLVPYAVMDQGADAVKQRLAQLKEQGMRYVVLDTLNEQHLLTQGEALRDMKLVTGGSGLAIGLARQWADSTKQTSSATEAGKPQSGAGVVLSGSCSVMTNKQVAHYLKQAAGRAIDVARCLESDDAQQSYAQELADWVKAHRDDALAPLLYATSSPDELAQIQQRWGAEASSHAVEKLFAAVARQLQEDGFQRFIIAGGETSSIVVQTLGIHAFHIGPSISPGVPWVRSTTHPLSLALKSGNFGDEDFFARAQKEFAA
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of 3-oxo-tetronate to 3-oxo-tetronate 4-phosphate.
What are the official names of this protein?
3-oxo-tetronate kinase, 3-dehydrotetronate 4-kinase.
What is the protein family that this protein belongs to?
Belongs to the four-carbon acid sugar kinase family.
Protein: HSLV_LYSSC
Sequence: MGQIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTAKKVRRLFNGQVLAGFAGSVADAFTLFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEALS
What is the function of this protein?
Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
What are the official names of this protein?
ATP-dependent protease subunit HslV.
What is the protein family that this protein belongs to?
Belongs to the peptidase T1B family. HslV subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PUR7_RHOBA
Sequence: MNDTYQFDAAGALLSTQLPFPRRQGKVRDVYDLGDRLLIVSSDRISAFDYILPTGIPDKGRLLTAMSRFWFEQMDAGRIGQNVGSAGGDGSSNPRSISHHLISTDVPEDVAAVVDPKPLEGRVMVTRKASVVPFECVVRGYLEGSGWKEYQATGEVCGVSLPAGLKQCDQLSEAIFTPATKAEEGHDENVSYEVMSQSLGEEQSSQLRRMSLAIYQDASKIAAERGLLIADTKFEFGVVDGELMLIDEVLTPDSSRFWAADEYEPGHSQRSFDKQFVREYLQESDWDRNSPPPPLPESIAHQTADRYREGYERLVGKAFA
What are the official names of this protein?
Phosphoribosylaminoimidazole-succinocarboxamide synthase, SAICAR synthetase.
What is the protein family that this protein belongs to?
Belongs to the SAICAR synthetase family.
Protein: DAPA2_HALH5
Sequence: MDFGHVLTAMVTPFDAKGNVDLEKVERLVEFLLANGTEGLVVAGTTGESPTLREEEKLALFEKVVTVVNKRVPVIAGTGSNNTYVSAQLTKKATALGVDGIMAVTPYYNKPSQEGMYAHFAAIAEATHLPVMLYNIPSRSVVNLSAETIVKLSYIPNITSLKEANGDLDHMVSVIEQTPDTFHLYSGDDSLTLPALSIGAKGVVSVASHIIGPEMQQMMMAFRGGDVEHAANLHRKLLPIMKGLFTAPNPTCVKAALQIKGFDTGGVRLPLVPPTSEQRQHLQFLIEQLKVS
What is the function of this protein?
Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
What are the official names of this protein?
4-hydroxy-tetrahydrodipicolinate synthase 2, HTPA synthase 2.
What is the protein family that this protein belongs to?
Belongs to the DapA family.
Protein: IRAP_SALTI
Sequence: MKNLIAELLLKLAQKEEESKELVAQVEALEIIVTAMLRNMAQNEQEMLIRQVEGALEGVKPDASVPDHDTELLRQYVKKLLRHPRH
What is the function of this protein?
Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS especially during phosphate and magnesium starvation, but also in stationary phase and during nitrogen starvation.  Its effect on RpoS stability is due to its interaction with RssB, which probably blocks the interaction of RssB with RpoS, and the consequent delivery of the RssB-RpoS complex to the ClpXP protein degradation pathway.
What are the official names of this protein?
Anti-adapter protein IraP.
What is the protein family that this protein belongs to?
Belongs to the IraP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TASG_HAPIR
Sequence: MFFDSVTNGPEDVMYQVKAACDSDNDPSKIDLGVGTYRNEDGDYHELDVLKEIATVQTISGTGAIHIGAMFLARSATDVLPHVYVGTPTWGNYQPLLRLAGLEMRTYNHYLSQTGRVDFASVLSAIRTTPRGSTFILQGCCHNPTAADFSREQWDIVVAEMESHGHLPFFDIAYQGLGEGVDEDVYGVRLCADKGMEMVVCQSFAKNFGLYGERCGALHVVCTSDDVAARVKDQLRCLIRWEFSSSPAYGARLVNLVLSDARAEEQCLLPLSKTQCQELQNKFRIYAVPNGRITMSGLSQGNIDYAARAIDAVVRSGLEAREPTG
What is the function of this protein?
Aminotransferase; part of the gene cluster that mediates the biosynthesis of the tetramic acids Sch210971 and Sch210972, potential anti-HIV fungal natural product that contain a decalin core (PubMed:25885659).  The PKS module of tasS together with the enoylreductase tasC catalyze the formation of the polyketide unit which is then conjugated to 4-hydroxyl-4-methyl glutamate (HMG) by the condensation domain of the tasS NRPS module (PubMed:25885659).  One unique structural feature of Sch210971 and Sch210972 is the tetramic acid motif proposed to be derived from the non-proteinogenic amino acid HMG, by a Dieckmann-type condensation catalyzed by the reductase domain of tasS (PubMed:25885659).  The aldolase tasA catalyzes the aldol condensation of 2 molecules of pyruvic acid to yield the intermediate 4-hydroxyl-4-methyl-2-oxoglutarate (HMOG), which can then be stereoselectively transaminated, may be by tasG, to form HMG (PubMed:25885659).  The Diels-Alderase tas3 then uses the Dieckmann product of tasS as substrate and catalyzes the Diels-Alder cycloaddition to form the decalin ring of Sch210971 and Sch210972 (PubMed:25885659).
What are the official names of this protein?
Aminotransferase tasG, Tetramic acid Sch210971/2 biosynthesis cluster protein G.
What is the protein family that this protein belongs to?
Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
Protein: RIMM_SALTY
Sequence: MSKQLAAQVPAEPVVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDLIIKLKGVDDRDAANLLTNCEIVVDSSQLPALEEGDYYWKDLMGCQVVTAEGYDLGKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLATRTIEVDWDPGF
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y4170_ARATH
Sequence: MPVLYSTGYDLVNLCIGETKKNIKLTEDILDAGMELDFILREYCDSKLPLEEDPFNDDTGRFYVLDKSQIEDNAWILLYLELVVATSFRNHITHGLTSLKILKVAMEISRSPGVSVNMGLDAYDATFYISYKDFCKARVGKEVDRIALVRRILDPQLEILRLGGYTLSSQTIKPSNTMDAGSF
What are the official names of this protein?
UPF0725 protein At4g11700.
What is the protein family that this protein belongs to?
Belongs to the UPF0725 (EMB2204) family.
Protein: RS27_METPE
Sequence: MVRLYRENRSKFYRVKCPDCENEQIIFEKASTVVDCVVCGHVLAEPRGGRAALKAEILAELE
What are the official names of this protein?
30S ribosomal protein S27e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eS27 family.
Protein: PAX_I68A3
Sequence: MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEKPKFLPDLYDYKGNRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFVSPREAKRQLKKDLKSQEQCAGLPTKVSHRTSPALKTLEPMWMDSNRTAALKASFLKCPKK
What is the function of this protein?
May play a role in the modulation of host immune response.
What are the official names of this protein?
Protein PA-X.
What is the protein family that this protein belongs to?
Belongs to the influenza viruses PA-X family.
Protein: AT2C1_RAT
Sequence: MKVARFQKIPNVENETMIPVLTSKRASELAVSEVAGLLQADLQNGLNKSEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISVLMRQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAATNGDLASRSNIAFMGTLVRCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSFGIIGIIMLVGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHILTSDGLHAEVTGVGYNQFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIRKAEYPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQEKAQMGSAGLRVLALASGPDLGQLTLLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAIASRLGLYSKTSQSVSGEEVDTMEVQHLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSILDLLFLLGLTSSVCIVSEIIKKVERSREKTQKNTTSTPSSFLEV
What is the function of this protein?
ATP-driven pump that supplies the Golgi apparatus with Ca(2+) and Mn(2+) ions, both essential cofactors for processing and trafficking of newly synthesized proteins in the secretory pathway (By similarity).  Within a catalytic cycle, acquires Ca(2+) or Mn(2+) ions on the cytoplasmic side of the membrane and delivers them to the lumenal side.  The transfer of ions across the membrane is coupled to ATP hydrolysis and is associated with a transient phosphorylation that shifts the pump conformation from inward-facing to outward-facing state (By similarity).  Plays a primary role in the maintenance of Ca(2+) homeostasis in the trans-Golgi compartment with a functional impact on Golgi and post-Golgi protein sorting as well as a structural impact on cisternae morphology.  Responsible for loading the Golgi stores with Ca(2+) ions in keratinocytes, contributing to keratinocyte differentiation and epidermis integrity (By similarity).  Participates in Ca(2+) and Mn(2+) ions uptake into the Golgi store of hippocampal neurons and regulates protein trafficking required for neural polarity (By similarity).  May also play a role in the maintenance of Ca(2+) and Mn(2+) homeostasis and signaling in the cytosol while preventing cytotoxicity (By similarity).
What are the official names of this protein?
Calcium-transporting ATPase type 2C member 1, ATPase 2C1, ATP-dependent Ca(2+) pump PMR1, Ca(2+)/Mn(2+)-ATPase 2C1, Secretory pathway Ca(2+)-transporting ATPase type 1, SPCA1.
What is the protein family that this protein belongs to?
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIA subfamily.
What are the subcellular locations of this protein?
Golgi apparatus, trans-Golgi network membrane; Multi-pass membrane protein. Golgi apparatus, Golgi stack membrane; Multi-pass membrane protein. Note=During neuron differentiation, shifts from juxtanuclear Golgi position to multiple Golgi structures distributed over the neural soma with a predominance in the apical dendritic trunk.
Protein: ACCD_VIBC3
Sequence: MSWLEKILEKSNIVSSRKASIPEGVWTKCTSCEQVLYYAELERNLEVCPKCDHHMRMKARRRLETFLDQGERVELGEELEPQDKLKFKDSKRYKERLAAAQKASGEKDALVVMKGAVLGVPVVACAFEFSFMGGSMGSVVGARFVRAVEAAMEHNCGLICFSASGGARMQEALMSLMQMAKTSAALERLSDKGLPFISVMTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVREELPEGFQRSEFLLEHGAIDMIVDRRDMRQRVASLLAKMTGQASPLVVSVNDAPNEAPYAVPEANKKG
What is the function of this protein?
Component of the acetyl coenzyme A carboxylase (ACC) complex.  Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
What are the official names of this protein?
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, ACCase subunit beta, Acetyl-CoA carboxylase carboxyltransferase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the AccD/PCCB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RBM11_HUMAN
Sequence: MFPAQEEADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHNYRNEEMLVGRSSFPMQYFPINNTSLPQEYFLFQKMQWHVYNPVLQLPYYEMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMTAPLPNSASVSSSLNHVPDLEAGPSSYKWTHQQPSDSDLYQMNKRKRQKQTSDSDSSTDNNRGNECSQKFRKSKKKKRY
What is the function of this protein?
Tissue-specific splicing factor with potential implication in the regulation of alternative splicing during neuron and germ cell differentiation.  Antagonizes SRSF1-mediated BCL-X splicing.  May affect the choice of alternative 5' splice sites by binding to specific sequences in exons and antagonizing the SR protein SRSF1.
What are the official names of this protein?
Splicing regulator RBM11, RNA-binding motif protein 11.
Protein: CC177_HUMAN
Sequence: MVDPVPEEEKAGAEPGDSGGDEAVASVPPDSQGAQEPAASSASASASAAVPRKAEVPCAAAEGGRREQSPLLHLDLFNFDCPEAEGSRYVLTSPRSLEACARCAVKPVELLPRALADLVREAPGRSMRVATGLYEAYEAERRAKLQQCRAERERIMREEKRRLFTPLSPAAAAAAAAAAASAPSAGSSSSCSSASLPASPAPRAARKASPSPSSARTQPPPAGSRTGRKSHSLDSLSRRREGALSSESGASSSSYSGESLRELRWPPRASARNSCPAGSASSTTNAPGRPSALTLVPITGRSFSLGDLSHSPQTAQHVERIVRQVRAERGLRGVPERDRKIAALMLARHQEELLLLEQRAAAHGQWELQRVHAKQRREREEREKQRALEQGRRAWAAQVEERRGRRGREEREAARRRQRQYERSEERRRELAERQGLLRRERAERAAREDRLRKLQQEQNLKQREEGLQEGRERAEQIRRERAQRAARAKQRQEGQLQREKRELSRAERARHEALLQGRTRQQRQEREGLRSSLEASLGRAQENYEHLVEQRTRELRERARREELQGRRAKEAAERKEREHQAHLEALARAGERRLQHATQVAEEAVQQKARRVGQSRLEKERAQRANKEKVERDEDCRRRELLQAIGRKLERSEQLTRERRSALESARSTARASFHVREKVREETNTRSFDRMVREAQLHASLDRK
What are the official names of this protein?
Coiled-coil domain-containing protein 177, Myelin proteolipid protein-like protein.
Protein: ORMY_FAXLI
Sequence: FDAFTTGF
What is the function of this protein?
Myotropic peptide, enhances both the frequency and amplitude of spontaneous hindgut contractions.  It is synthesized by abdominal ganglionic neurons.
What are the official names of this protein?
Orcomyotropin, OMT.
What are the subcellular locations of this protein?
Secreted.
Protein: NCAP_TPMV
Sequence: MADLFSKVNDFQKYRTNLGRQGGLTVKLVGVRSTVVVLVPSTKDHRLRWKLIRLLTLAVYNDSLPDSISIGALLSLLAISFEQPAAVIRGLLSDPDLEVQMIEVSLDDQGEIRFAARGDILTRYKDAYFEKIRDFPNPDDDLAIFEDPELGDYSDITQDEYQAMITTITIQLWILLTKAVTAPDTAHDSEQRRFIKYLQQRKAYAAFKFTTIFTERVRRKIAQSLSIRKFMVSIMLEVRKSGSAKGRISECIADVSAYIEEAGLSGFILTLKYGIGTRFPVLALNAFQSDLSVIRNLIDLYKSMGTIAPFMVLIEDATQVKFAPGNYSLLWSFAMGVGTALDHAMNNLNINRDYLEPSYFRLGQEVVRLSESTVDRSMAQELGIDPTSEDLIMRAVQAAGVGSRDPDAARRTGRFQVADIQIDEGPVDLATEAEDQTTKDNEQRIKVPDPRGSIGQSNAQFQPPKPQLRGRVMPPERKPTDQQKNLQDQRPRPSATPRRLTKDAEDNIDQLFAQYDSGVAAPEDVTLVTSDSTSPARSSGTGSDMDLINQSP
What is the function of this protein?
Encapsidates the genome, protecting it from nucleases.  The nucleocapsid (NC) has a helical structure.  The encapsidated genomic RNA is termed the NC and serves as template for transcription and replication.  During replication, encapsidation by N is coupled to RNA synthesis and all replicative products are resistant to nucleases.
What are the official names of this protein?
Nucleoprotein, Nucleocapsid protein, NP, Protein N.
What is the protein family that this protein belongs to?
Belongs to the paramyxoviruses nucleocapsid family.
What are the subcellular locations of this protein?
Virion. Host cytoplasm.
Protein: XDH1_HALVD
Sequence: MSPAPTDIVEEFTRRDWQGDDVTGTVRVAMIGLGWWTRDEAIPAVEASEFCETTVVVSSSKEKAEGATALTESITHGLTYDEFHEGVAADAYDAVYVVTPNGLHLPYVETAAELGKAVLCEKPLEASVERAEKLVAACDRADVPLMVAYRMQTEPAVRRARELVEAGVIGEPVFVHGHMSQRLLDEVVPDPDQWRLDPELSGGATVMDIGLYPLNTARFVLDADPVRVRATARVDDEAFEAVGDEHVSFGVDFDDGTLAVCTASQSAYQLSHLRVTGTEGELEIEPAFYNRQKRGFRLSWGDQSADYDFEQVNQMTEEFDYFASRLLSDSDPAPDGDHALVDMRAMDAIYAAAERGTDVAVDAADSDSADSDSADAAAANHDADPDSDGT
What is the function of this protein?
NADP-dependent D-xylose dehydrogenase involved in the degradation of D-xylose, a major component of hemicelluloses such as xylan.  Catalyzes the initial reaction in the xylose utilization pathway by oxydizing D-xylose into D-xylonolactone.
What are the official names of this protein?
D-xylose 1-dehydrogenase [NADP(+)] 1, XDH 1.
What is the protein family that this protein belongs to?
Belongs to the Gfo/Idh/MocA family.
What are the subcellular locations of this protein?
Secreted.
Protein: RUVA_SHIBS
Sequence: MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: RL4_TREDE
Sequence: MEKKVYSVDGKELRTINLDDKVFGLPVNDDVIYYAINNELANKRVGTACTKGRAEVHGSNSKPYSQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFSYSMPKKAKRLAMKSILSLKAQNDRLVVVEDFTVESGKTRDLVKILDNFAKGERAVIILKDDDSLVKRAGRNIPHLSFLAYNRLRAHDLFYGRKVIMLESAAKNLSEFYGCKEAE
What is the function of this protein?
Forms part of the polypeptide exit tunnel.
What are the official names of this protein?
50S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
Protein: CHED_BACLD
Sequence: MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGLVHVMLPDSSLSKTPDINVAKYADTAVEATVKMLLEAGCRKYALKAKMAGGAEMFKFKMTNDLMKVGPRNVLAIKKHLSLLNIPIVSEDTGGNSGRTIEFDPQSAELVIRTVKQGVTTI
What is the function of this protein?
Deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs).  CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase (By similarity).
What are the official names of this protein?
Chemoreceptor glutamine deamidase CheD.
What is the protein family that this protein belongs to?
Belongs to the CheD family.
Protein: AMT2_ARCFU
Sequence: MVGRMCVAVLIVLLLVATAGADPNGAETLKENPELPVDFVWALICGFLVMFMQAGFAMLEAGFSRAKNVANVMMKNLMDFAVGSLAFFAVGFALMMGADWQGIAGTTGWFLAGESYDVSTIELWFFMLVFAATAATIVSGSIAERPKFSVYLVYSAVVSAVIYPIYGHWLWGGGWLSSSEFMVKLGGGYGALDFAGSGVVHALGGYIALAAVMLLGPRLGKYDSDGNPRAIPGHNLAFAVIGTFILWFGWFGFNAGSTLSAHELRVSIIASNTNLAAAAGAVTAMAITWLRNGKPDVGMTCNGAVAGLVAITAPCAWVQPWSSVVIGTIAGFIATYGYWWLEKRGLDDVVGAIPVHGFSGTWGLIALGIFADGSYGLYATESPLVTGLLYGNWGFFIVQLISAIVNFAWAFGTGFALFWILKKVIGIRVSPEEEMLGLDIAEHAAVAYPNFVCTETELPLAMKQGGGR
What is the function of this protein?
Involved in the uptake of ammonium/ammonia (NH(4)(+)/NH(3)).  Transport is electrogenic.
What are the official names of this protein?
Ammonium transporter Amt2.
What is the protein family that this protein belongs to?
Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: SIL11_ARATH
Sequence: MEDSNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIPDDSFMFVPNCLLHGFLIKPANEVQQVTIAQETVMEDPPTSLFKNSVPIREDQIQNAITNSIR
What is the function of this protein?
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins.  E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.  It probably triggers the ubiquitin-mediated degradation of different substrates.
What are the official names of this protein?
E3 ubiquitin-protein ligase SINA-like 11, RING-type E3 ubiquitin transferase SINA-like 11, Seven in absentia-like protein 11.
What is the protein family that this protein belongs to?
Belongs to the SINA (Seven in absentia) family.
Protein: BACS_HALSD
Sequence: MTGAVTSAYWLAAVAFLIGVGITAALYAKLEGSRARTRLAALAVIPGFAGLSYVGMALGIGTVTVNGAELVGLRYVDWVVTTPLLVGFIGYNAGASRRAIAGVMIADALMIVFGAAAVVSGGTLKWALFGVSALFHVSLFAYLYVIFPGGIPDDPMQRGLFSLLKNHVGLLWLAYPFVWLMGPAGIGFTGAVGAALTYAFLDVLAKVPYVYFFYARRQAFIDVTDSRAAAKGDGPAVGGEAPVATGDDAPTAAD
What is the function of this protein?
Involved in the control of phototaxis.
What are the official names of this protein?
Sensory rhodopsin, SR.
What is the protein family that this protein belongs to?
Belongs to the archaeal/bacterial/fungal opsin family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: Y910_MAGMM
Sequence: MLDKQLLDILVCPVCKGTLSVDKGHTELVCDKDKLAFPVRDDIPVMLMEEARKLEADDA
What are the official names of this protein?
UPF0434 protein Mmc1_0910.
What is the protein family that this protein belongs to?
Belongs to the UPF0434 family.