PharMolix/UniProtQA huggingface dataset:
Protein: Y1561_LISMH
Sequence: MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEEVLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEKELSALHELSMSKK
What are the official names of this protein?
UPF0358 protein LMHCC_1561.
What is the protein family that this protein belongs to?
Belongs to the UPF0358 family.
Protein: UXUA_CUTAK
Sequence: MKMTFRWYGAETDPITLENIRQIPGVSGIMGAMDWIPVGEMWSDEEISSYVRKVNDAGLECEVIESVNVHEDIKLGKPSRDIYIANYCKTLENLAAHGIKVVVYNFMPVFDWLRTELFHRNEDGSTCLYYDHEELVGLTPQDIVKATLDSSAFPLPGWEPERLADLDEVMAQYTDMPRDQLRNNYRYFLEGIVPTCEKVGIRMAVHPDDPAWGIFGIPRIVHSDSDLQRIVDLVNSPANSLCVCAGSLGSNPDNDVPAILAKYGDMGRVAAAHVRNVKFLGSKKFKEASHLSSDGSLDMYAIMKSIHDHCSNSYIRPDHGRMIWGETGRPGYPLYDRALGITYLNGLWEAIEKASAY
What is the function of this protein?
Catalyzes the dehydration of D-mannonate.
What are the official names of this protein?
Mannonate dehydratase, D-mannonate hydro-lyase.
What is the protein family that this protein belongs to?
Belongs to the mannonate dehydratase family.
Protein: TRUA_STRP2
Sequence: MTRYKATISYDGYAFAGFQRQSHARSVQEEIEKTLTRLNKGQTITVHGAGRTDSGVHALGQVIHFDLPYQMDEEKLRFALDTQSPEDIDVISIELVADDFHCRYAKHSKTYEFIVDRGRPKNPMRRHYATHFPYPLDVERMQIAIKKLEGTHDFTGFTASGTSVEDKVRTITEASLIVDETGQFLTFTFSGNGFLYKQIRNMVGTLLKIGNNRMPVEQIDLILEKKDRQLAGPTAAPNGLYLKEIRYEE
What is the function of this protein?
Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase A, tRNA pseudouridine(38-40) synthase, tRNA pseudouridylate synthase I, tRNA-uridine isomerase I.
What is the protein family that this protein belongs to?
Belongs to the tRNA pseudouridine synthase TruA family.
Protein: BACD2_XENTR
Sequence: MSGDTCLTAVCPASGAKPKTYSFKGGCLGNKYIRLNVGGCLYYTTVQVLTRHDTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGSILNYLRDDTITLPKSRHEVKELMAEAKYYLIQGLVDKCQAALQDKNDTYEAVCNIPIITSPKEEEKLIESSAKPVVKLLYNRSNNKYSYTSNSDDNLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQTKVEFPEARIYEETLNVLLYETPRVPDNSLLEATSRTRSQASHSEDDEGFELRDRVRRIHVKRYSTYDDRQLGHQSAYRD
What is the function of this protein?
Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in regulation of cytoskeleton structure.  The BCR(TNFAIP1) E3 ubiquitin ligase complex mediates the ubiquitination of target proteins, leading to their degradation by the proteasome (By similarity).
What are the official names of this protein?
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, BTB/POZ domain-containing protein TNFAIP1.
What is the protein family that this protein belongs to?
Belongs to the BACURD family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Endosome.
Protein: NUSB_PHOLL
Sequence: MKPAARRRARECAVQAIYSWQLSGNSIADVELQFLSEQDVTGVDVTYFRELLSGVAVNAAKLDALMAPYLSRQLEELGQVEKAILRIAMFELSYRDDVPYKVAINEAIELAKVFGAEDSHKFVNGVLDKSGPAVRRKR
What is the function of this protein?
Involved in transcription antitermination.  Required for transcription of ribosomal RNA (rRNA) genes.  Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
What are the official names of this protein?
Transcription antitermination protein NusB, Antitermination factor NusB.
What is the protein family that this protein belongs to?
Belongs to the NusB family.
Protein: RSMA_COREF
Sequence: MEEPSGAQLLGPVEIRALAEKLDVTPTKKLGQNFVHDPNTVRRIVTAADLTPEDHVVEVGPGLGSLTLALVEKAASVTAVEIDPRLAAELPATFAWRAPGLADKLTVVQKDALKVQQSDFTTQPTALVANLPYNVSVPVLLHMLAEFPSITKVLVMVQLEVADRLAAVPGSKIYGVPSVKASFYGEVSKAGTIGKHVFWPAPQIESGLVKIIRTHTPWPQDDATRAKVWPVIDAAFLQRRKTLRAALSGHFGSASAAEEALRAADIDPQLRGERLDVADYVRLAGVIGS
What is the function of this protein?
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle.  May play a critical role in biogenesis of 30S subunits.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase A, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase, 16S rRNA dimethyladenosine transferase, 16S rRNA dimethylase, S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YITI_BACSU
Sequence: MLEVKTISVEDTYEIRHRILRPHQSIEQCKYKEDHAEGSFHLGVFYDGTLISIASFSPQSQPLLTEASAYRLRGMATLEGYRDQKAGSTLIKHAEHKLAESGVQAVWCNARHHVKGYYAKLGWKELGEPFDIPGIGNHIVMYKTLRTSR
What are the official names of this protein?
Uncharacterized N-acetyltransferase YitI.
What is the protein family that this protein belongs to?
Belongs to the acetyltransferase family.
Protein: SYE1_MAGSA
Sequence: MTSPVVRFAPSPTGLLHVGNARVALLNRLFAKAHGGSFILRLDDTDLERSRPEFAEAILDDLRWLGLDWDRLERQSARLDAYAAAAERLKVSGRVYACYETPDELELRRKVQLGRGLPPVYDRAALKLAPDEIARLEAEGRRPHWRFKLELEDVRWDDCVRGPSHYHGGNLSDPVLIRGDGSFLYTLPSVVDDIEFGVTHIIRGEDHVTNTAPQIQLFQALGAVPPAFAHLPLLTGATGEGLSKRLGSGSLKDLRATGIHPMALNSLLAKLGSSDAIDIRHTLAELEAEFAWDKFGRGTPKFDSAELERLDARLMHTASFAEVRDRLGIDGADEEFWLAVRPNLNHLAEAEAWWAICRQDLTPVIEDGEFTRAAAALLPDGAWDHATWGAWTETVKQATGRKGKALFHPLRLALTGRENGPELKTLLPLIGHDRARARLMGEIA
What is the function of this protein?
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
What are the official names of this protein?
Glutamate--tRNA ligase 1, Glutamyl-tRNA synthetase 1, GluRS 1.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SDH8A_ORYSJ
Sequence: MIYRNWSLLSSTVVIWGGVATAGLAGIFLFGGKEKFQNYLCREGERLRQQDRAAMGKN
What are the official names of this protein?
Succinate dehydrogenase subunit 8A, mitochondrial.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein.
Protein: RL31_METM5
Sequence: MEEERIYTIPLRDVTNKSPTTKRAPRAMRAIRDFLKKHMKSDIVKLDNSINEKVWERSLNKIPAKVRVKVVKEGDVVKATLIE
What are the official names of this protein?
50S ribosomal protein L31e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL31 family.
Protein: GLPE_COXBU
Sequence: MMYKQISHLEAWELVKKRDIVIADVRDQDSYEEEHIANALHLSMAKLQEYSEKADKEKPVLVYCYHGISSQSVAQHLVEQGFKEVYSLIGGFETWKAHHPTSDANKN
What is the function of this protein?
Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
What are the official names of this protein?
Thiosulfate sulfurtransferase GlpE.
What is the protein family that this protein belongs to?
Belongs to the GlpE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PURT_BACFR
Sequence: MKKILLLGSGELGKEFVISAQRKGQHIIACDSYAGAPAMQVADECEVFDMLNGEELERIVKKHRPDIIVPEIEAIRTERLYDFEKEGIQVVPSARAVNYTMNRKAIRDLAAKELGLKTAKYYYAKSLEELKEAAEIIGFPCVVKPLMSSSGKGQSLVKSAAELEHAWEYGCNGSRGDIRELIIEEFIKFDSEITLLTVTQKNGPTLFCPPIGHVQKGGDYRESFQPAHIDPAHLKEAEDMAEKVTRALTGAGLWGVEFFLSHENGVYFSELSPRPHDTGMVTLAGTQNLNEFELHLRAVLGLPIPGIKQERIGASAVILSPIASQERPQYRGMEEVTGEEDTYLRIFGKPYTRVNRRMGVVLCYAPNGSDLDALRDKAKRIADKVEVY
What is the function of this protein?
Involved in the de novo purine biosynthesis.  Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR).  Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate.
What are the official names of this protein?
Formate-dependent phosphoribosylglycinamide formyltransferase, 5'-phosphoribosylglycinamide transformylase 2, Formate-dependent GAR transformylase, GAR transformylase 2, GART 2, Non-folate glycinamide ribonucleotide transformylase, Phosphoribosylglycinamide formyltransferase 2.
What is the protein family that this protein belongs to?
Belongs to the PurK/PurT family.
Protein: SHPK_HUMAN
Sequence: MAARPITLGIDLGTTSVKAALLRAAPDDPSGFAVLASCARAARAEAAVESAVAGPQGREQDVSRILQALHECLAALPRPQLRSVVGIGVSGQMHGVVFWKTGQGCEWTEGGITPVFEPRAVSHLVTWQDGRCSSEFLASLPQPKSHLSVATGFGCATIFWLLKYRPEFLKSYDAAGTIHDYVVAMLCGLPRPLMSDQNAASWGYFNTQSQSWNVETLRSSGFPVHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQLAASMPSGFQPAQTPDPTAPVAYFPYFNRTYLGVAASLNGGNVLATFVHMLVQWMADLGLEVEESTVYSRMIQAAVQQRDTHLTITPTVLGERHLPDQLASVTRISSSDLSLGHVTRALCRGIVQNLHSMLPIQQLQEWGVERVMGSGSALSRNDVLKQEVQRAFPLPMSFGQDVDAAVGAALVMLRRHLNQKES
What is the function of this protein?
Acts as a modulator of macrophage activation through control of glucose metabolism.
What are the official names of this protein?
Sedoheptulokinase, SHK, Carbohydrate kinase-like protein.
What is the protein family that this protein belongs to?
Belongs to the FGGY kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KDPB_LEPIN
Sequence: MNRESKVFIESPILKEAILNTFKKLHPFLQAKNPVMFIVFLGALFTTWIFFKDLYYGVYSSFNLQISLWLWFTVLFANFAEAIAEGRGKARTDSLKKTRSNIIAKKLVGNKIENVPGTLLKIGDIVICEAGDLIPGDGEILEGIASVDESAITGESAPVVRESGGDRSAVTGGTKVLSDRIKISITAEQGRTFLDQMIALVEGAKRQKTPNEIALTMLLSGLSFIFLIAVMSLPLFAEFVAKEGGQSANLSIPILISLLVCLIPTTIAGLLSAIGISGMERLIRFNVISKSGRAIEAAGDIDILLLDKTGTITLGNREARDFYPAKGVDEKYLADVAQLSSLADETPEGRSIVILAKDKFGIRERNLSEMEGEFIPFSASTKMSGVNLKKEGKVVRKIRKGAGDSIRNYLHTLGQKISAELEETIQTISQRGSTPILITEEDRLLGVIELKDIVKGGLKERFASLRKMGIRTVMITGDNPLTAAAIAAEAGVDDFLAEATPETKLKKIREQQAKGYLVAMIGDGTNDAPALAQSDVGVAMNTGTQTAREAGNMIDLDSNPSKLIEIVEIGKQLLMTRGALTTFSIANDVAKYFAILPALFGSFYAVSEVGPLSALNLMKLGSQKSAVLSAVIFNALVIPALIPLALRGIVYKPLGADRILKRNLLIFGLGGMVIPFLGIKCIDLMLGFLGII
What is the function of this protein?
Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm.  This subunit is responsible for energy coupling to the transport system and for the release of the potassium ions to the cytoplasm.
What are the official names of this protein?
Potassium-transporting ATPase ATP-binding subunit, ATP phosphohydrolase [potassium-transporting] B chain, Potassium-binding and translocating subunit B, Potassium-translocating ATPase B chain.
What is the protein family that this protein belongs to?
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RRF2M_DROER
Sequence: MLKCAWQNGPRQSNRWLWQLSNQIWKRSYSSKIRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTVTDYLTQERERGITICSSAVTFPWNDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKLPRLIFVNKMDRPDADFVKCVSDLKDKLETQPVCLQYPVKNEDGQLAINDVIHLERLSWQQKDLGRSYKNVKLEPSDDLRQLQEKRNELIDQLSGLDDELADVVISTESFDKVDNALIERALRRATTQQKVVPVLLGSAYKNVGIQRLMDAVNSYLPAPEERNQIYDCFGTEVAGKVFKIVHDKQRGPLTLVRILRGEIKRGMRLISARGQAEVVSKLYEPLADEYREVSAVQSGDVVICAGLKSTVTGDLLTSSEEDDEFDESHELFAIDPQIPDAVYFCSIEPPSVSSQTAMEQALKQLQREDPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYKIDVDLGPLQIAYKEAIESPALTTLSVEKEIAGSKQSVSITLEVVKNQAELFSLDKSPENLPNLNTLRPRILQVLRKGSISALERGPRVGGQVVETQIRLHNATIGRGTADSFVMATASQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLSRRRALINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTASMTMQPCGFSSMNSVDESLAERRAQGLE
What is the function of this protein?
Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis.  Not involved in the GTP-dependent ribosomal translocation step during translation elongation.
What are the official names of this protein?
Ribosome-releasing factor 2, mitochondrial, RRF2mt, Elongation factor G 2, mitochondrial, EF-G2mt, mEF-G 2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: CCME_ARATH
Sequence: MAARLLFRRSSQILRSIQRNPQISSSFESPPCPIFHSLTTASPDPSRLSSLTFLRSLSIARRGPTRPKKIDIGAKARQMQNRRLWTYALTFSCIAGFVVIVLNQFQDQLVFYLTPSDAMEKFAENPTKNKFRLGGLVLEGSVAQPAASQEMEFVITDLITDILVRYKGSLPDLFREGHSVVVEGFIKPYTDEVRKEVSTKPISKKARNLDCFFSATEVLAKHDEKYMPQEVAAAIEKNKKIIEAAATEQAAEVAAS
What is the function of this protein?
Heme-binding chaperone that may be involved in cytochrome c maturation in mitochondria.
What are the official names of this protein?
Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial, Cytochrome c maturation protein E homolog, AtCCME, Heme chaperone CcmE homolog.
What is the protein family that this protein belongs to?
Belongs to the CcmE/CycJ family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Single-pass membrane protein. Mitochondrion intermembrane space. Note=According to some authors, CCME is a peripheral mitochondrion inner membrane protein with the hydrophilic domain oriented toward the mitochondrion intermembrane space (Pubmed:11069919).
Protein: SYGB_ECO55
Sequence: MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADISLLQ
What are the official names of this protein?
Glycine--tRNA ligase beta subunit, Glycyl-tRNA synthetase beta subunit, GlyRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL10_RICCN
Sequence: MLRSEKPVAVEDIVNIYKESPSIIITHYHGLTVSQVSSLRESLKSKEAGFKVVKNTLAKIAANQTGLNSIVNLFAGPTAIVYSKEPVEMAKLVVNFAKANDNLKIIGGIVDNHVLDEHSIKELSKLPTLNELRGKIVGLLQAPATKVVGVLQAPSSSMARVIQAHASKN
What is the function of this protein?
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL10 family.
Protein: TX825_LYCSI
Sequence: MKLMIFTGLVLFAIVSLIEAQAENGKPCLPEYKVCTHAPGNCCSDLVCDCYGRYKSGAQIGRNCFCLQKGVIYKREN
What are the official names of this protein?
U8-lycotoxin-Ls1o, Toxin-like structure LSTX-H25.
What is the protein family that this protein belongs to?
Belongs to the neurotoxin 19 (CSTX) family. 08 (U8-Lctx) subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: IF2_MYCMS
Sequence: MKKQVKNIKKQKAQNQTKNIKKQLKEEVNTGLIDGIFVYTEPLSVIEFATKINKPLTAILKHYFNQGLLLNQNTLLTEEQMGELCLEFGFDFKKETTVTKENILQTLLETVDDEKHLKERPPIVTIMGHVDHGKTTLLDSIKNSNVVASEAGGITQAIGAYQITTNHNKKITFIDTPGHEAFTEMRSRGANVTDIVVLIVAADDGVMPQTEEAIDHAKLANVPIIVFINKIDKPEADPNRVKTELMKYGLVAEEFGGDIPFIEGSAIKKINLDKLQDTIILISELENLKANPDKFASGVVLEAHLDKAKGPVASVLVQQGTLEIKDIMIAGTTFGSIKHIEDEFKHKVLKAEPSKPVVVYGLNQVPKAGDKFVVINDEKMAREISEAQLKKQQEEERRTKQAFTLDAIKQHIDEGELKNITLIIKADTQGSVEALKNSLSKINISGVKINIIRASVGAISLSDISLASTVRDGLVIVYGFNVRPDAIVRKKAEEDHIEIKLHNIIYKVIEELEDAAKGILDPEVKELVLGQAQVRALFRHSAIGTIGGFYVLDGIIPRNAKIRVIRNGVVVYDGEINSLQHQKQDAKEIKAGFEGGLTIKNFNDIKEEDIFEAYKIEQIK
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
What are the official names of this protein?
Translation initiation factor IF-2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: U512R_DICDI
Sequence: MAIFKSISSISNSTGSMGSSIGASNLDGFVSNDNSISCFDGCCGGGLGGWGGFNGLGGFNGGCGGSNTNIINLDIDIGRRRRRCC
What are the official names of this protein?
UPF0512 protein R.
What is the protein family that this protein belongs to?
Belongs to the UPF0512 family.
Protein: GREA1_LACPL
Sequence: MEPTFNKMTAAGYHAIEQEIEDLKQQRPERIRILAAAAALGDRSENAEYSSAKRDLGRLESRLRYLNKQLQYAQIVQPADNDQLDIGKFVTIEFLDDHDQITYQLVGKQEANLEQQKISFTSPIGQALANHTVDDVVTVNAPNGAYQVKVIAVKRA
What is the function of this protein?
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites.  The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes.  Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus.  GreA releases sequences of 2 to 3 nucleotides.
What are the official names of this protein?
Transcription elongation factor GreA 1, Transcript cleavage factor GreA 1.
What is the protein family that this protein belongs to?
Belongs to the GreA/GreB family.
Protein: UVRA_STRMU
Sequence: MQDKLIIRGARAHNLKNIDVEIPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGNMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGIPYCKNGHGAITASSVEQIVDQVLILPERTRMQILAPVVRRKKGQHKAVFDRIQKDGYVRVRIDGDIMDVAEVPELSKNKMHNIEVVVDRLVQKDGIRGRLFDSIEAALHLGDGYVIIDTMDDHELIFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLDLVIPDENKTLREGTLAPWNPISSNYYPQLLEQAMNAFGVDMDKPWKDLSDEDKKLVLHGSGDTAFHFHYQNDFGGVRDIDIPFEGIISNISRRYHETNSDFTRNVMRSYMNELPCATCHGYRLNDQALSVRVGGKEGLNIGQVSELSIADHLSLLTHLELSENEKTIATPIVKEIKDRLTFLNNVGLNYLTLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLISSLKKMRDLGNTLIVVEHDEDTMMAADWLVDVGPGAGALGGEIVASGTPRQVAKNKKSITGQYLSGKKKIPVPLDRRKGSGRFIEIKGAAENNLQNINVKFPLGKFIAVTGVSGSGKSTLVNSILKKVIAQKLNRNSEKPGKYKSISGIEHIDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHYKDKNIAEILNMTVNDAAEFFAPIPKIARKIRTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEHNLDVIKTADHIIDLGPEGGVGGGQVIATGTPEQVAEMTESYTGQYLKGRLNEK
What is the function of this protein?
The UvrABC repair system catalyzes the recognition and processing of DNA lesions.  UvrA is an ATPase and a DNA-binding protein.  A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities.  When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
What are the official names of this protein?
UvrABC system protein A, UvrA protein, Excinuclease ABC subunit A.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. UvrA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KATG_SINMW
Sequence: MTMDQKTDNAGKCPVAHTAPRGRSNRDWWPDQLDVQVLHRHSDLSDPMGKSFNYAEEFRKLDLDALKRDLHALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNVALESMGFKTFGFAGGRTDVWEPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAHDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDPSFIGADPEGGAIEDQGLGWKSTFGTGVGKDAITGGPEVTWSQTPTRWSNYFFENLFNFEWELSKSPAGAHQWKAKNAEASVPDAYDATRKHVPTMLTTDLSLRFDPVYEKISRRFLENPDQFADAFARAWFKLTHRDMGPKVRYLGPEVPAEDLIWQDVIPPVDHELVDDADVAGLKAKILASSLSVQELVSTAWDSASTFRGSDKRGGANGARIRLAPQKDWEVNQPAQLARVLSVLEGIQRDFNASQAGGKKISLADLIVLAGNAGVEKAARAAGQEIIVPFTPGRMDASEAQTDAASFAALEPRADGFRNYVNSSRLQFMKPEEALVDRAQLLTLTAPEMTVLVGGLRVLKAGQPEHGVFTSRPEALTNDFFVNLLDMGTQWSPVEGKEGVYEGRDRKTGAARWTGTRVDLIFGSHSQLRAFAEVYAQTDAREKFVKDFVAAWTKVMNADRFDLV
What is the function of this protein?
Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity.
What are the official names of this protein?
Catalase-peroxidase, CP, Peroxidase/catalase.
What is the protein family that this protein belongs to?
Belongs to the peroxidase family. Peroxidase/catalase subfamily.
Protein: PDE3A_RAT
Sequence: MAVRGEAAQDWAKPGLRGPSPAPVARGDHRCRGGSPSSPRGSGCCWRALALQPLRRSPQLSSALCAGSLSVLLALLVRLVGGEVGGELESSQEAAAEEEEEEGARGGVFPGPRGGAPGGGAQLSPWLQPAALLFSLLCAFFWMGLCLLRAGVRLPLAVALLAACCAGEALVQLSLGVGDGRLLSLPAAGVLLSCLGGATWLVLRLRLGVLMVALTSALRTVALVSLERFKVAWRPYLAYLAAVLGLLLARYAEQLLPQCSGPAPPRERFGSQSSARTKEEIPGWKRRRRSSSVVAGEMSGCGGKSHRRTSLPCIPREQLMGHSEWDHKRGSRGSQSGTSVTVDIAVMGEAHGLITDLLADPSLPPNVCTSLRAVSNLLSTQLTFQAIHKPRVNPTVTFSENYTCSDSEEGLEKDKLAIPKRLRRSLPPGLLRRVSSTWTTTTSATGLPTLEPAPVRRDRSASIKPHEAPSPSAVNPDSWNAPVLMTLTKSRSFTSSYAVSAANHVKAKKQNRPGGLDKISPVPSPSSSPPQGSPTSSPVSGIASVQFPESPEVTTKRGPGSHRALTYTQSAPDLSPQIPPSPVICSSCGRPYSQGNPADGPSERSGPAMQKPNRTDDTSQVTSDYETNNNSDSSDILQNDEEAECQREPLRKASACGTYTPQTMIFLDKPILAPEPLVMDNLDSIMDQLNTWNFPIFDLVENIGRKCGRILSQVSYRLFEDMGLFEAFKIPVREFMNYFHALEIGYRDIPYHNRIHATDVLHAVWYLTTQPIPGLPSVIGDHGSASDSDSDSGFTHGHMGYVFSKAYHVPDDKYGCLSGNIPALELMALYVAAAMHDYDHPGRTNAFLVATSAPQAVLYNDRSVLENHHAAAAWNLFMSRPEYNFLVNLDHVEFKHFRFLVIEAILATDLKKHFDFVAKFNAKVNDDVGIDWTNENDRLLVCQMCIKLADINGPAKCKDLHLRWTEGIASEFYEQGDEEASLGLPISPFMDRSAPQLANLQESFISHIVGPLCHSYDSAGLMPGKWVDDSDDSGDTDDPEEEEEEAETPHEEETCENSEAPRKKSFKRRRIYCQITQHLLQNHMMWKKVIEEEQCLSGTENQAPDQAPLQHSSEQIQAIKEEEEEKGKPRAEETLAPQPDL
What is the function of this protein?
Cyclic nucleotide phosphodiesterase with specificity for the second messengers cAMP and cGMP, which are key regulators of many important physiological processes.  Has also activity toward cUMP.  Independently of its catalytic activity it is part of an E2/17beta-estradiol-induced pro-apoptotic signaling pathway.  E2 stabilizes the PDE3A/SLFN12 complex in the cytosol, promoting the dephosphorylation of SLFN12 and activating its pro-apoptotic ribosomal RNA/rRNA ribonuclease activity.  This apoptotic pathway might be relevant in tissues with high concentration of E2 and be for instance involved in placenta remodeling.
What are the official names of this protein?
cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A, Cyclic GMP-inhibited phosphodiesterase A, CGI-PDE A.
What is the protein family that this protein belongs to?
Belongs to the cyclic nucleotide phosphodiesterase family. PDE3 subfamily.
What are the subcellular locations of this protein?
Membrane; Multi- pass membrane protein. Cytoplasm, cytosol.
Protein: ARLY_CLOP1
Sequence: MKLWGGRFTHQVDDLVNTFNSSISFDSRMYKEDIIGSIAHVTMLGEEKIIPKEDSKKIASGLYEILNKLNQGVLKIDNSSEDIHSFIESTLTDYIGEEGKKLHTGRSRNDQVTLDTKLYLKGYIKILICEILNLEKTLLNLSSENKETIMPGYTHMQKAQPITFAHHILAYSEMFKRDISRLLDCYKRLDEMPLGSGALATTTYPINREKVANLLGFSKVTLNSLDSVSDRDYAIETLSCLSLLMMHLSRFSEEIIIWSTDEFKFIELDDSYSTGSSIMPQKKNPDVAELVRGKTGRVYGDLMTLLTVMKGLPLAYNKDMQEDKEALFDGLDTTLLSIKTFNGMIKTMKINKSIMKTSASSGFTNATDVADYLVKKGVAFRDAHEIVGNLILYCIDEGKSIDNLSLSEFKTFSNKFENDIYKAINLLTCIEERKVIGGPSISSINIQIEHLNNFIQESNEKLNLLK
What are the official names of this protein?
Argininosuccinate lyase, ASAL, Arginosuccinase.
What is the protein family that this protein belongs to?
Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SG1_ARATH
Sequence: MISSLSASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKMKLFGGSEEN
What is the function of this protein?
Required for the early stage of chloroplast development.  May be involved in chloroplast protein biosynthesis and/or degradation.
What are the official names of this protein?
protein SLOW GREEN 1, chloroplastic.
What are the subcellular locations of this protein?
Plastid, chloroplast. Note=Accumulates as spots in the chloroplast.