PharMolix/UniProtQA huggingface dataset:
Protein: NSP5_ROTBU
Sequence: MYLSIDVTSLPSISSSIYKNESSSTASTLSGKSIGRSEQYVSPDAEASSKYMLSKSPEDIGPSDSASNDPLTSFSIRSNAVKTNADAGVSMDSSVQSRPSSNVGCDQVDFSFNKGIKVNANLDSSISVSTNSRKEKSKNDHKSRKHYPRIEAESDSDDYVLDDSDSDDGKCKNCKYKRKYFALRMRMKQVAMQLIEDL
What is the function of this protein?
Plays an essential role in the viral genome replication.  Participates, together with NSP2, in the formation of viral factories (viroplasms) which are large inclusions in the host cytoplasm where replication intermediates are assembled and viral RNA replication takes place.  Orchestrates the recruitment of viroplasmic proteins such as capsid proteins to these factories.
What are the official names of this protein?
Non-structural protein 5, NSP5, NS26.
What is the protein family that this protein belongs to?
Belongs to the rotavirus NSP5 family.
What are the subcellular locations of this protein?
Host cytoplasm. Note=Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging.
Protein: MTD5_DACSA
Sequence: MEKKQLKFIDLFAGIGGMRIPFEELGGKCVFSSEIDKHCQRTYEANFGEMPTGDITKLSADSIPYHDLLLAGFPCQAFSQGGRKQGFQDERGQLFFQVAKILNDHRPQAILLENVKGLRGHDKGRTLQMILYVLEKLNYVVSWKIISATDFNLPQKRERIFIVGFQDKNNKNLIFDFPKPIELTAKVGDLLEKEVDEKYTITDRMWEGHQNRKKAHRKRGNGFGFSLVNRNSSYTRTISARYYKDGSEVLVEQANKNPRVLTPRECARLQGFPESFVIPVSDCQAWRQFGNSVPVSVIRAIAQKMLSYIDLTEQQKEFKKVDLDQVITQKKKQLYPEDYQEQFIQKELALL
What is the function of this protein?
A methylase, recognizes the double-stranded sequence 5'-CCNGG-3', methylates C-2 on both strands, and protects the DNA from cleavage by the DsaV endonuclease.
What are the official names of this protein?
Type II methyltransferase M.DsaV, M.DsaV, Cytosine-specific methyltransferase DsaV, Modification methylase DsaV.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
Protein: ORUR_PSEAE
Sequence: MKQPLNFTAELVPVAYAEALLDLVAEYGVSRQALFDAARVRPEVLDSPNGRLSFLDFNQLTYSAQALCGEPALGLVLGQRLNVSAHGILGYAVLSSANLGKAIQFALKYYRVLGLAYELELVLDDGRAELRAVESMPLGAASVFAAEGLMATLYSIACFLVGEPLQDVRVGFAYPPPAHARRYAEVFGVAAEFEQPWHWLSMPSEYLERPMALANPATVQMCEQQCEALLATLDVQEGLLTRVRRLLLARPGDFPDLEQAARELHTSGRSLRRHLSSLGTTYQQVLDDVRKRLALQYLTTTQLPLYEIALLLGFNDSSNFRRAFRKWTGKLPSDYREAP
What is the function of this protein?
Probably activates the ArgJ gene that encodes ornithine acetyltransferase.  Binds to its own promoter-operator region.  Probably binds ornithine.
What are the official names of this protein?
Ornithine utilization regulator.
Protein: TRMD_BRUAB
Sequence: MTDLPEKEGGRFHASVLTLYPEMFPGPLGISLAGKALAEGKWQLDTVQIRDFAEGRHRMVDDTPSGGGAGMVMKADVVARALDSVDDGRPMLLMTPRGKPLTQERVRALADGAGAIILCGRFEGVDERVIEGRNLEEISIGDYILSGGETAAIVLLDAVVRLLPGVMGNRESGETESFETGLLEHPHYTRPQEWEGRAIPDILTSGNHGAIDKWRLEQAERITRERRPDLWEAYCKNRRKIGGQ
What is the function of this protein?
Specifically methylates guanosine-37 in various tRNAs.
What are the official names of this protein?
tRNA (guanine-N(1)-)-methyltransferase, M1G-methyltransferase, tRNA [GM37] methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase TrmD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MBPHL_MOUSE
Sequence: METATTLEIASCSQRQVEAAADPADAKGPRTSHQQEAGSPSLQLLPSIEEHPKIWLPRALKQTYIRKAGETVNLLIPIQGKPKPQTTWTHNGCALDSSRVSVRNGEHDSILFIREAQRTDSGCYQLCVQLGGLQATATINILVIEKPGPPQSIKLVDVWGANATLEWTPPQDTGNTALLGYTVQKADKKSGLWFTVLERYHRTSCVVSNLIVGNSYAFRVFAENQCGLSDTAPVTADLAHIQKAATVYKAKGFAQRDLSEAPKFTQPLADCTTVTGYDTQLFCCVRASPRPKIIWLKNKMDLQGNPKYRALSQLGICSLEIRKPSPFDGGIYTCKAINALGEASVDCRVDVKAPH
What is the function of this protein?
Myosin-binding protein which plays a role in cardiac function (PubMed:28778945).  Seems to regulate conduction in the atria and ventricular conduction systems (PubMed:28778945).
What are the official names of this protein?
Myosin-binding protein H-like.
What is the protein family that this protein belongs to?
Belongs to the immunoglobulin superfamily. MyBP family.
What are the subcellular locations of this protein?
Cytoplasm, myofibril, sarcomere.
Protein: PYRD_BURMS
Sequence: MFSSLYPLARASLFKMDAEDAHHLTLRMLGAAGRTGLACALSPRVPDAPRTVMGLSFRNPVGLAAGLDKDGAAIDGFAALGFGFIEVGTVTPRAQPGNPRPRMFRLPEADAIINRMGFNNSGVDQFVKNVQAARYRGVLGLNIGKNADTPIERAADDYLYCLERVYPFASYVTINISSPNTKNLRQLQGAGELDALLAALKDKQRRLADLHGKLVPLALKIAPDLDDEQVKEIAATLLRHDIEGVIATNTTLSREAVKGLPHADEAGGLSGRPVFDASNAVIRKLRAELGDAVPIIGVGGIFSGEDARAKLAAGAALVQLYTGFIYRGPALVAECVKAIARGEAR
What is the function of this protein?
Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.
What are the official names of this protein?
Dihydroorotate dehydrogenase (quinone), DHOdehase, DHOD, DHODase, Dihydroorotate oxidase.
What is the protein family that this protein belongs to?
Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: NU3C_PROMP
Sequence: MFSLPGYEYFLGFLIIAAAVPILALVTNLIVSPKGRTGERKLTYESGMEPIGGAWIQFNIRYYMFALVFVIFDVETVFLYPWAVAFNRLGLLAFIEALIFITILVIALAYAWRKGALEWS
What is the function of this protein?
NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.  Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit 3, NAD(P)H dehydrogenase subunit 3, NADH-plastoquinone oxidoreductase subunit 3, NDH-1 subunit 3, NDH-C.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 3 family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Multi-pass membrane protein.
Protein: SYR_HELPG
Sequence: MHTLIKGVLEEILEEEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHKKTQGLFDSVVACKGYINFTLSLGFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKKANNDLEPSLFKENEETIIGVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDAVFERLEKANALYEKDSKIWLKSSLYQDESDRVLVKEDKSYTYLTGDVIYHDKKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIYYIHYANSRIHTMLEKSPFSKEEVLQTPLKNLNAEEKYLLFSALSLPKAIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKTKELLKICLMVSLSLTNAFKLLGIEIKTKISAKD
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: THE1_ARATH
Sequence: MVFTKSLLVLLWFLSCYTTTTSSALFNPPDNYLISCGSSQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNSIYQTARVFSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSFNNFNGSYIFKEYTVNVTSEFLTLSFIPSNNSVVFVNAIEVVSVPDNLIPDQALALNPSTPFSGLSLLAFETVYRLNMGGPLLTSQNDTLGRQWDNDAEYLHVNSSVLVVTANPSSIKYSPSVTQETAPNMVYATADTMGDANVASPSFNVTWVLPVDPDFRYFVRVHFCDIVSQALNTLVFNLYVNDDLALGSLDLSTLTNGLKVPYFKDFISNGSVESSGVLTVSVGPDSQADITNATMNGLEVLKISNEAKSLSGVSSVKSLLPGGSGSKSKKKAVIIGSLVGAVTLILLIAVCCYCCLVASRKQRSTSPQEGGNGHPWLPLPLYGLSQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPGIPMAPMEPFDNSMSIIDRGGVNSGTGTDDDAEDATTSAVFSQLVHPRGR
What is the function of this protein?
Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner.  Mediates the response of growing plant cells to the perturbation of cellulose synthesis and may act as a cell-wall-integrity sensor.  Controls ectopic-lignin accumulation in cellulose-deficient mutant backgrounds.
What are the official names of this protein?
Receptor-like protein kinase THESEUS 1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type I membrane protein.
Protein: MYST2_ARATH
Sequence: MGSSANTETNGNAPPPSSNQKPPATNGVDGSHPPPPPLTPDQAIIESDPSKKRKMGMLPLEVGTRVMCRWRDGKHHPVKVIERRRIHNGGQNDYEYYVHYTEFNRRLDEWTQLDQLDLDSVECAVDEKVEDKVTSLKMTRHQKRKIDETHIEGHEELDAASLREHEEFTKVKNISTIELGKYEIETWYFSPFPPEYNDCVKLFFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYAQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEEAYNLACILTLPSYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLEILKKHKGNISIKELSDVTAIKAEDILSTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDASKLIWTPYKDQS
What is the function of this protein?
Histone acetyltransferase which may be involved in transcriptional activation.  Acetylates 'Lys-5' of histone H4 (H4K5ac) (PubMed:16648464, PubMed:17877703).  Essential for gametophyte development (PubMed:19040736).  Negative regulator of flowering controlling the H4K5ac levels in the FLC chromatin (PubMed:23273925).
What are the official names of this protein?
Histone acetyltransferase of the MYST family 2, Histone acetyltransferase of the GNAT/MYST superfamily 5, MYST-like histone acetyltransferase 2.
What is the protein family that this protein belongs to?
Belongs to the MYST (SAS/MOZ) family.
What are the subcellular locations of this protein?
Nucleus.
Protein: TWIST_DROVI
Sequence: MSARSVSPKVLLDISYKPTLPNIMELQHNVIKLIQVEQHAYMQLMEQPTAHYMQQQQQQQQHQQQQQQHQQQQQQQYAPLPSLAPNAADYAAYGITELEDTDYNIPSNEVLSTSSNHSAQSSLELNNNQHNFEQQQQQQQQQQQQQTATPAGVATAAQTPHGYMLNEHGKRSRSSSDYDCQTDALSMQPEHKKLLQQQQQQQQQQQQQQQQQLYVDYLPTTVDEVAAAQTQAQAPTQQSACLSPHSHSHSHFDFAADEELQDHKAHIFKYGGYPQTIAQQQQQQQQQQLHFQSSYRTGQNYEAYDPANSLNGSTYSSSDRDDMEYARQTALSSVGGYAKEDELEDMSPTCLGDDSSLLDAGDAAGKAFRKPRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKALQQIIPTLPSDKLSKIQTLKLATRYIDFLCRMLSSSDISLLKALEAQSSPVSPGYGNASTLLSAANGAEADLKCLRKANGAPIIPPEKLSYLFGVWRMEGDAQHQKA
What is the function of this protein?
Involved in the establishment and dorsoventral patterning of germ layers in the embryo.
What are the official names of this protein?
Protein twist.
What are the subcellular locations of this protein?
Nucleus.
Protein: EER5_ARATH
Sequence: MAYVSMGEAHRRITEYLNRFCDAVSYQDSSTLCRLLSFSSNSPPLLSLADALNVFQDSSSLIRQSDRFSEYGEILAHVFRSLQSYRVGNLVEAYLAFDKFANAFVQEFRNWESAWALEALYVVCYEIRVLAEKADKDLTSNGKSPEKLKAAGSLLMKVFGVLAGKGPKRVGALYVTCQLFKTYFKLGTVNLCRSVIRSIETARIFDFEEFPRRDKVTYMYYTGRLEVFNENFPAADTKLSYALQNCNPKRERNIRMILKYLVPVKLSLGIIPKDELLRNYNLHEYTKIVQALRKGDLRLLRHALQEHEDRFLRSGVYLVLEKLELQVYQRLMKKIYINQKLSDPARAHQLKLEGIAKALRWLDMDMDLDEVECIMTILIYKNLVKGYLAHKSKVVVLSKQDPFPKLNGKPVSS
What is the function of this protein?
Involved in the regulation of ethylene response (PubMed:18429939).  Probable TREX-2 component required for nuclear RNA export.  The TREX-2 complex (transcription and export complex 2) functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket).  TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (PubMed:19843313).
What are the official names of this protein?
Enhanced ethylene response protein 5, Nuclear mRNA export protein THP1, AtTHP1.
Protein: RS19_AGRVS
Sequence: MARSVWKGPFVDGYLLKKAEKVRESGRSEVIKMWTRRSTILPQFVGLTFGVYNGSKHIPVSVNEDMVGHKFGEFAPTRTYYGHGADKKAKRK
What is the function of this protein?
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S19.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
Protein: CPSKS_PHASA
Sequence: MFAKFDMLEEEARALVRKVGNAVDPIYGFSTTSCQIYDTAWAAMISKEEHGDKVWLFPESFKYLLEKQGEDGSWERHPRSKTVGVLNTAAACLALLRHVKNPLQLQDIAAQDIELRIQRGLRSLEEQLIAWDDVLDTNHIGVEMIVPALLDYLQAEDENVDFEFESHSLLMQMYKEKMARFSPESLYRARPSSALHNLEALIGKLDFDKVGHHLYNGSMMASPSSTAAFLMHASPWSHEAEAYLRHVFEAGTGKGSGGFPGTYPTTYFELNWVLSTLMKSGFTLSDLECDELSSIANTIAEGFECDHGVIGFAPRAVDVDDTAKGLLTLTLLGMDEGVSPAPMIAMFEAKDHFLTFLGERDPSFTSNCHVLLSLLHRTDLLQYLPQIRKTTTFLCEAWWACDGQIKDKWHLSHLYPTMLMVQAFAEILLKSAEGEPLHDAFDAATLSRVSICVFQACLRTLLAQSQDGSWHGQPEASCYAVLTLAESGRLVLLQALQPQIAAAMEKAADVMQAGRWSCSDHDCDWTSKTAYRVDLVAAAYRLAAMKASSNLTFTVDDNVSKRSNGFQQLVGRTDLFSGVPAWELQASFLESALFVPLLRNHRLDVFDRDDIKVSKDHYLDMIPFTWVGCNNRSRTYVSTSFLFDMMIISMLGYQIDEFFEAEAAPAFAQCIGQLHQVVDKVVDEVIDEVVDKVVGKVVGKVVGKVVDERVDSPTHEAIAICNIEASLRRFVDHVLHHQHVLHASQQEQDILWRELRAFLHAHVVQMADNSTLAPPGRTFFDWVRTTAADHVACAYSFAFACCITSATIGQGQSMFATVNELYLVQAAARHMTTMCRMCNDIGSVDRDFIEANINSVHFPEFSTLSLVADKKKALARLAAYEKSCLTHTLDQFENEVLQSPRVSSAASGDFRTRKVAVVRFFADVTDFYDQLYILRDLSSSLKHVGT
What is the function of this protein?
Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-kaurene diphosphate in a two step process.
What are the official names of this protein?
Ent-kaur-16-ene synthase, CPS/KS, Ent-copalyl diphosphate synthase, Ent-kaurene synthase, FCPS/KS.
What is the protein family that this protein belongs to?
Belongs to the terpene synthase family.
Protein: NRDR_STRR6
Sequence: MRCPKCGATKSSVIDSRQAEEGNTIRRRRECDECQHRFTTYERVEERTLVVVKKDGTREQFSRDKIFNGIIRSAQKRPVSSDEINMVVNRIEQKLRGRNENEIQSEDIGSLVMEELAELDEITYVRFASVYRSFKDVSELESLLQQITQSSKKKKER
What is the function of this protein?
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.
What are the official names of this protein?
Transcriptional repressor NrdR.
What is the protein family that this protein belongs to?
Belongs to the NrdR family.
Protein: RECA_HISS2
Sequence: MATPEEKAKALEAALGQIEKQFGKGAIMKLGETQKLDIEAISTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELLISQPDNGEQALEICDALVRSGAVDVVIVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVVFGNPETTTGGNALKFYASVRLDIRRVGSIKNGDEVIGNETRVKVVKNKVAPPFRQVDFQILYGEGISRNGELIELGVKHKLVNKSGAWFSYEGEKIGQGKTNAMKWLAEHPEQAAILEQKLRSELLANPEKALLADLEAESESNISEVESDF
What is the function of this protein?
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.  It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
What are the official names of this protein?
Protein RecA, Recombinase A.
What is the protein family that this protein belongs to?
Belongs to the RecA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y2657_BORBR
Sequence: MQAFVQFLGSNPYILLFLTIGLAVWVGKFSIKGYGLGAVAAAIVVGCLVATVGAAYGVKFHLDEFAKSLLYYLFMYGVGLRVGPSFVNALNKESINYAILAIIAPILGLAIVVLGTQFFGLPLGAAGGMLAGSQTMSAAIGSAEQAVSAGVLSLGSESPEQISAMIALSYGITYIWGTVGIILLCKYLPRIWGVDAKAAALEFEKAHGVPNVDDAGLTAFHPFDLRAYRVENPESIGKTVQQFRTRFPQYQVVNVERGDQLLGPSAETVLQQGDVVALGGRLEEMTANMGVLGPEVPDARALNIPLDQAEILVTNKEVTGRPLKTFRGSELAGQIQLQRVERSGVPLPIGLETTLQKRDVLFVTGLQPAVSKAGEIFGVIARHSSATDLLTLSFGMILGFLIGLIEVPAFGAKVGLGNAGGLLLSGIIVSSISSRLRFFGNTPNAARNILEDLGLIGFVAIVGINAGADLLTQLTGAIALKIFIVGFLASTIPPIIVWAIGFHIMKINPALLMGATAGARSHSGPAREAAKEVGSSVPWLGFPVGYAVSGVLLTVFGYFAMVLAH
What are the official names of this protein?
Uncharacterized transporter BB2657.
What is the protein family that this protein belongs to?
Belongs to the AAE transporter (TC 2.A.81) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: MIAA_SINMW
Sequence: MQNLARDIDAILITGPTASGKSALGVKLAQRHGGVVINADSMQVYGTLKILTARPDESEMGGVEHFLYGHVPPDRAYSTGAWLREAEALVARLRIEGRMPVFVGGTGLYFKALTGGLSDMPEVPHAIRQRLRKRLMEEGAEALHYELSALDPETAQRVRSGDGQRIVRALEVMEATGRPIGFYQQSRGPVIIDATRARKIVVLPERPVLHSRINRRFEAMLGMGAVEEVRALLALDLPLEMPAMKAIGVQQIAAMLKGEMSEAQAIEAGAAQTRQYAKRQMTWFRNQLDETWQRIDAAEALGENH
What is the function of this protein?
Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).
What are the official names of this protein?
tRNA dimethylallyltransferase, Dimethylallyl diphosphate:tRNA dimethylallyltransferase, DMAPP:tRNA dimethylallyltransferase, DMATase, Isopentenyl-diphosphate:tRNA isopentenyltransferase, IPP transferase, IPPT, IPTase.
What is the protein family that this protein belongs to?
Belongs to the IPP transferase family.
Protein: PSBE_ORYSA
Sequence: MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITDRFDSLEQLDEFSRSF
What is the function of this protein?
This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Cytochrome b559 subunit alpha, PSII reaction center subunit V.
What is the protein family that this protein belongs to?
Belongs to the PsbE/PsbF family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: CCMA_CUPNH
Sequence: MPARSPEPLPDHSSVCSPGCADLPILAASGLGFSRAGRVVFSGIDLALGPGDLLQVLGANGSGKTSLLRVLSGLVAPDEGELHWRGRPVRAGDPSLLQALAYVGHANGIDPELSPVENLRFAARLAGVAATPDNVQAALAAFGLERVMHAPARSLSQGLRRRAALARLALARRELWLLDEPVTSLDADAAARFQAQLDDHLRAGGMAIVATHALLPGARTLRLDARS
What is the function of this protein?
Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein A.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RL29_SYNS9
Sequence: MARPNTSEVRNLSDADINEKIDGLRRELFQLRFEQATRQLANTHRFKEARIKLAQLLTVQSERQRSTAS
What are the official names of this protein?
50S ribosomal protein L29.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL29 family.
Protein: SRP72_SCHPO
Sequence: MSNHEEEIEELAQRIGKIEVGDTKSDIYQKVLNLIDIERYEHALKIIEKYLGETDAVYERAYCAFQLGKEDFSLEDKQFLQHLQAQKAYRLSDFSKALKIYEHLENDLPEQRADIRVNMLAAASQLPGLQLNNAVSLDDQDSVFNLATRYLTIGDWNQAIELLSSSLEKLENSDSNSEDHKSQINLCRLQLFFAYLQAGDNEKASKESLKISKDCLDETSQAIFVNNLISMSIDNPYISFRDLHGTNLEKALSSLLASQKKQFIRNLALLDMAVGKQRSVRKEKKRNPEESIYFSTILLREETKSLISPKKLPGYLENLFKSDSDNIVVALLLMQHKISNGNFRGALSIYQKLRTSLEASQSLSVLYSPGLVGLGDALHYKIQSTGFKSQLLHEAANYWRKQQSCEAKLLLCTRSLLAHLDERAPVSTIQDDMSVIDDLLQWKGPISELVSCKVAALCYLDKEIESGMDKYLVPTKDLITGIDVDDIEIRGVPVSAAIGPIKRSVEANSSNSSKKTRKRRKPTPKSFNPKATPDPQRWIPKRDRTNVKIKSKGKSMQGGVA
What is the function of this protein?
Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) (By similarity).  The SRP complex interacts with the signal sequence in nascent secretory and membrane proteins and directs them to the membrane of the ER (By similarity).  The SRP complex targets the ribosome-nascent chain complex to the SRP receptor (SR), which is anchored in the ER, where SR compaction and GTPase rearrangement drive cotranslational protein translocation into the ER (By similarity).  Binds the signal recognition particle RNA (7SL RNA) in presence of srp68 (By similarity).  Can bind 7SL RNA with low affinity (By similarity).  The SRP complex possibly participates in the elongation arrest function (By similarity).
What are the official names of this protein?
Signal recognition particle subunit srp72, Signal recognition particle 72 kDa protein homolog.
What is the protein family that this protein belongs to?
Belongs to the SRP72 family.
What are the subcellular locations of this protein?
Cytoplasm. Endoplasmic reticulum membrane. Nucleus, nucleolus.
Protein: EFTU_ACIC1
Sequence: MAKAKFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDQNPDINPYTPFEQIDKAPEERARGITISIAHVEYQTEKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTKEHVLLARQVGVPYIVVALNKADVVDDEEILQLVELEVRELLNSYEFPGDDVPVVRVSALKALEGDPKWTQSILDLLKACDDYIPEPVREIDKPFLMPIEDVFTITGRGTVVTGRVERGVVKVGDEVEIVGIHPKTLKTTVTGVEMFRKLLDEGRAGDNIGVLLRGIKREEVERGQVVCKPGSITPHTEFEAQVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVHLPEGTEMVMPGDNTEMRVELIQPIAMEEGLRFAIREGGRTVGAGRVTKILK
What is the function of this protein?
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.
What are the official names of this protein?
Elongation factor Tu, EF-Tu.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MTEF4_HUMAN
Sequence: MAAFGRQVLDWHRLIPLTWACMARQTPHLGEQRRTTASLLRKLTTASNGGVIEELSCVRSNNYVQEPECRRNLVQCLLEKQGTPVVQGSLELERVMSSLLDMGFSNAHINELLSVRRGASLQQLLDIISEFILLGLNPEPVCVVLKKSPQLLKLPIMQMRKRSSYLQKLGLGEGKLKRVLYCCPEIFTMRQQDINDTVRLLKEKCLFTVQQVTKILHSCPSVLREDLGQLEYKFQYAYFRMGIKHPDIVKSEYLQYSLTKIKQRHIYLERLGRYQTPDKKGQTQIPNPLLKDILRVSEAEFLARTACTSVEEFQVFKKLLAREEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE
What is the function of this protein?
Regulator of mitochondrial ribosome biogenesis and translation.  Binds to mitochondrial ribosomal RNAs 16S, 12S and 7S and targets NSUN4 RNA methyltransferase to the mitochondrial large ribosomal subunit (39S).
What are the official names of this protein?
Transcription termination factor 4, mitochondrial, Mitochondrial transcription termination factor 4, mTERF domain-containing protein 2.
What is the protein family that this protein belongs to?
Belongs to the mTERF family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: RS17_CLOBM
Sequence: MERSNRKTRIGRVVSNKMDKTIVVAVETKVRHPLYGKIMNRTTKFKAHDENNAANINDKVLIMETRPLSKQKRWRLVEVVEKAK
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: ALBC_BACSU
Sequence: MSILDIHDVSVWYERDNVILEQVDLHLEKGAVYGLLGVNGAGKTTLINTLTGVNRNFSGRFTLCGIEAEAGMPQKTSDQLKTHRYFAADYPLLFTEITAKDYVSFVHSLYQKDFSEQQFASLAEAFHFSKYINRRISELSLGNRQKVVLMTGLLLRAPLFILDEPLVGLDVESIEVFYQKMREYCEAGGTILFSSHLLDVVQRFCDYAAILHNKQIQKVIPIGEETDLRREFFEVIGHE
What is the function of this protein?
Involved in the production of the bacteriocin subtilosin.  Required for immunity to subtilosin.
What are the official names of this protein?
Putative ABC transporter ATP-binding protein AlbC, Antilisterial bacteriocin subtilosin biosynthesis protein AlbC.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily.
Protein: DMRX_METJA
Sequence: MNYRFGINMKIVWCITGAGHLLRESFQVMKRLKEEIEDLKVTTLVSRAGEEVVKMYGLFGELYNISNGNYYEELILEREHPYSSPITGRLSLGKYDYLICSPATGNTVAKVVNGIADSLVTNAIAQAGKGFVKSLIVPVDYKAGIVTTKLPYAIDKKKCKLCLKCINVCPNGAIVKRDNFVEILLSKCLGCGNCKKVCPYNAIIEGKEIKMRVRKIDAENTRKLMELEDVIVLKHPYEILEFFNIR
What is the function of this protein?
Involved in the biosynthesis of tetrahydromethanopterin, a coenzyme used in methanogenesis.  Catalyzes the reduction of dihydromethanopterin (H(2)MPT) to tetrahydromethanopterin (H(4)MPT).  Ferredoxin may serve as an electron donor.
What are the official names of this protein?
Dihydromethanopterin reductase (acceptor), H(2)MPT reductase.