PharMolix/UniProtQA huggingface dataset:
Protein: NCAP_TACVF
Sequence: MAQSKEVPSFRWTQSLRKGLSQFTQTVKSDILKDAKLIADSIDFNQVAQVQRVLRKTKRTDDDLNKLRDLNIEVDRLMSMKSVQKNTIFKVGDLARDELMELASDLEKLKDKIKRTESNGTNAYMGNLPQSQLNRRSEILRTLGFAQQGGRPNGIVRVWDVKDSSKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLSDLDKLIPNHECLQIITKEESSINISGYNLSLLAAVKAGASILDGGNMLETIRVSPDNFSSLIKNTLQVKRREGMFIDDRPGSRNPYENLLYKLCLSGDGWPYIGSRSQIMGRSWDNTSVDLTKKPDAVPEPGAAPRPAERKGQNLRLASLTEGQELIVRAAISELDPSNTIWLDIEDLQLDPVELALYQPAKKQYIHCFRKPHDEKGFKNGSRHSHGILMKDIEDAVPGVLSYVIGLLPPNMVITTQGSDDIRKLLDIHGRKDLKLIDVKFTSDQARLFEHQVWDKFGHLCKQHNGVIISKKNKSKDSPPSPSPDEPHCALLDCIMFHSAVSGELPKEEPIPLLPKEFLFFPKTAFAL
What is the function of this protein?
Encapsidates the genome, protecting it from nucleases.  The encapsidated genomic RNA is termed the nucleocapsid (NC).  Serves as template for viral transcription and replication.  The increased presence of protein N in host cell does not seem to trigger the switch from transcription to replication as observed in other negative strain RNA viruses.  Through the interaction with host IKBKE, strongly inhibits the phosphorylation and nuclear translocation of host IRF3, a protein involved in interferon activation pathway, leading to the inhibition of interferon-beta and IRF3-dependent promoters activation.  Encodes also a functional 3'-5' exoribonuclease that degrades preferentially dsRNA substrates and thereby participates in the suppression of interferon induction.
What are the official names of this protein?
Nucleoprotein, Nucleocapsid protein, Protein N.
What is the protein family that this protein belongs to?
Belongs to the arenaviridae nucleocapsid protein family.
What are the subcellular locations of this protein?
Virion. Host cytoplasm.
Protein: RL28_PROM4
Sequence: MSRVCDLSGTRANNGMAVSHSHIRTKKLQQANLQQRKLWWEEGKKWIKVRVTTRTLKTIQKKGLNSYAKAMGIDLSKV
What are the official names of this protein?
50S ribosomal protein L28.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL28 family.
Protein: GCSPA_DESVM
Sequence: MPFIPHSPEEVREMLSVIGVQSIEDLFVDIPAEMRPRSFELPLGLSEMQVLAKMEEMAARNRTDVVSFLGGGFYSHHIPAAVDALVSRGEFYTAYTPYQPEASQGTLQAIFEYQTAVCRLLDMDCANASVYDGGSAIFEAMMMAVRATKRRKLVIDEAVSPIWRTMLASYTSNLSLDLVTVPQVDGRSDMAAMKAAVDTGCAAVVVQNPNFFGVVEDFTDLFAHAKSQKAASVISVYPVMQSVLKTPGEMGADIAVAEGQSLGQPLSFGGPYLGIMTCTKDMVRQMPGRIVGRTNDTEGRTGYVLTLQAREQHIRRAKATSNICSNQALCALRTLVHLCLLGPEGLIRTAELSMERARYAMERLTAIAGVRPLNTAPFGNEFAVRLPIPAFEAVDRLTARGYVPGFPVGRYYAGMDDVLLVACTEKNSFEQVGILAEMLGGIL
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Probable glycine dehydrogenase (decarboxylating) subunit 1, Glycine cleavage system P-protein subunit 1, Glycine decarboxylase subunit 1, Glycine dehydrogenase (aminomethyl-transferring) subunit 1.
What is the protein family that this protein belongs to?
Belongs to the GcvP family. N-terminal subunit subfamily.
Protein: US03_HHV11
Sequence: MACRKFCRVYGGQGRRKEEAVPPETKPSRVFPHGPFYTPAEDACLDSPPPETPKPSHTTPPSEAERLCHLQEILAQMYGNQDYPIEDDPSADAADDVDEDAPDDVAYPEEYAEELFLPGDATGPLIGANDHIPPPCGASPPGIRRRSRDEIGATGFTAEELDAMDREAARAISRGGKPPSTMAKLVTGMGFTIHGALTPGSEGCVFDSSHPDYPQRVIVKAGWYTSTSHEARLLRRLDHPAILPLLDLHVVSGVTCLVLPKYQADLYTYLSRRLNPLGRPQIAAVSRQLLSAVDYIHRQGIIHRDIKTENIFINTPEDICLGDFGAACFVQGSRSSPFPYGIAGTIDTNAPEVLAGDPYTTTVDIWSAGLVIFETAVHNASLFSAPRGPKRGPCDSQITRIIRQAQVHVDEFSPHPESRLTSRYRSRAAGNNRPPYTRPAWTRYYKMDIDVEYLVCKALTFDGALRPSAAELLCLPLFQQK
What is the function of this protein?
Multifunctional serine/threonine kinase that plays a role in several processes including egress of virus particles from the nucleus, modulation of the actin cytoskeleton and inhibition of host immune response (PubMed:25907557, PubMed:31249678, PubMed:34935440).  Phosphorylates UL31 and UL34, two critical regulators of capsid budding from nucleus to endoplasmic reticulum, thereby facilitating virion egress (PubMed:15994828, PubMed:1656069).  Modulates and redistributes host components of the nuclear envelope, including LMNA, emerin/EMD and the nuclear matrix protein MATR3 (PubMed:20962082).  In turn, facilitates nuclear pore impairment and capsid release through impaired nuclear envelope (PubMed:31249678).  Phosphorylates envelope glycoprotein B (gB), probably to direct it to the cell surface (PubMed:19846518).  Promotes virus intracellular spread by restructuring host cell cytoskeleton.  Blocks host apoptosis to extend cell survival and allow efficient viral replication.  Promotes viral gene expression by phosphorylating host HDAC2 to reduce viral genome silencing (PubMed:20660201).  Strongly inhibits TCR-activated signal transduction in T-cells by reducing the ubiquitination of LAT and TRAF6, leading to a suboptimal activation of LAT (PubMed:25907557).  Subverts host antiviral innate immunity by inhibiting type I interferon production through hyperphosphorylation of beta-catenin/CTNNB1 (PubMed:31801859).  In addition, phosphorylates the RNA sensor RIGI and the transcription factor IRF3 to prevent the RLR-mediated antiviral signaling pathway (PubMed:34935440, PubMed:24049179).  Hyperphosphorylates host RELA and thereby dampens NF-kappa-B signaling (PubMed:24807716).
What are the official names of this protein?
Serine/threonine-protein kinase US3.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
What are the subcellular locations of this protein?
Host cytoplasm. Host nucleus.
Protein: YKJ7_SCHPO
Sequence: MSGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIRLNPGLKDKIEFVIVKDVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSIKRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGPPIHPMKNMDSLNTSNQIFWKLIDGSKEATPFYYYYVDVRDVAAAHVFALENAKLSNGRMLVSKGVFTTGDICKVLRKEFPNKSDVIAEPVDITVDPSFFKLDNSFSKSLGFKYHSDEECYVDTAKKLWERAEEFK
What are the official names of this protein?
Putative uncharacterized oxidoreductase C513.07.
What is the protein family that this protein belongs to?
Belongs to the NAD(P)-dependent epimerase/dehydratase family. Dihydroflavonol-4-reductase subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: ACDA2_ARCFU
Sequence: MVLEFGKGAFVVDDLRNVTIKIGEIAEEEEEWAPMGPTPMPGIATLRDWDFFLLKRYKPFYAPACDMCCLCTMGKCDLTGNKRGACGIDLAAQTGRIVTIACSIGVSAHTGHARHMLHDIEHMTGKKLSEIPVDLGPEIDEVAPLTELITGIKPKTLEDLERALRYAEEQIVQVVDAVHTGQEGSYLDYESKALHLGMLDSLGKEIADIAQICAFGYPKGEDNQPLIEVGMGVMDRSKAMILVIGHHAPPVLNIADYIEENGLEDEVDLGGICCTANDMTRYYQKAKIVSALGRQLKVIRAGLADVIVIDEQCIRADILYHTKKLGIPVICTNEKAMHALPDMTKEEPKNIIKYLLDGNPGCVILDPLKVGEVAVEVARARRKQRGDDIGPRLTEEQFMEYARACTQCGNCTIACPQGIRIGEAMEAAENGDRSKLEKEWDVCIACGRCEQVCPKGIPIIDMYNYAAWNLIVNEKGKLRRGRGPIRDSEIRNVGAPIVLGTIPGIIAVIGCGNYPNGTRDAYTIMDEFASRNYIVVTTGCMAFDAALYKDEEGQTVYEKYHDRFDGGGVVQIGSCVANAHIHGAAIKVARIFAKRNIRANYEEIADYILNRVGACGVAWGAYSQKAASIATGFNRLGIPAVVGPHGSKYRRAFLGRPYNDEDWMVYDARTGEKVRIEPAPQDLLVAAETIEEAIPLMAKLCFRPNDTTQGRSIKLTHYIDLSLKYLKRMPDDWHLFVRTEADLPLAKKEELLKELEDKHGWKIDWQKKKIVEGPIRGYHAGFNPTNLERCLRDGFMTV
What is the function of this protein?
Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2).  The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
What are the official names of this protein?
Acetyl-CoA decarbonylase/synthase complex subunit alpha 2, ACDS complex subunit alpha 2, ACDS complex carbon monoxide dehydrogenase subunit alpha 2, ACDS CODH subunit alpha 2.
What is the protein family that this protein belongs to?
Belongs to the Ni-containing carbon monoxide dehydrogenase family.
Protein: CAPSD_PAVCD
Sequence: MAPPAKRARRGLVPPGYKYLGPGNSLDQGEPTNPSDAAAKEHDEAYAAYLRSGKNPYLYFSPADQRFIDQTKDAKDWGGKIGHYFFRAKKAIAPVLTDTPDHPSTSRPTKPTKRSKPPPHIFINLAKKKKAGAGQVKRDNLAPMSDGAVQPDGGQPAVRNERATGSGNGSGGGGGGGSGGVGISTGTFNNQTEFKFLENGWVEITANSSRLVHLNMPESENYRRVVVNNMDKTAVNGNMALDDIHAQIVTPWSLVDANAWGVWFNPGDWQLIVNTMSELHLVSFEQEIFNVVLKTVSESATQPPTKVYNNDLTASLMVALDSNNTMPFTPAAMRSETLGFYPWKPTIPTPWRYYFQWDRTLIPSHTGTSGTPTNIYHGTDPDDVQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQTNRALGLPPFLNSLPQSEGATNFGDIGVQQDKRRGVTQMGNTNYITEATIMRPAEVGYSAPYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHGQKTTTTGETPERFTYIAHQDTGRYPEGDWIQNINFNLPVTNDNVLLPTDPIGGKTGINYTNIFNTYGPLTALNNVPPVYPNGQIWDKEFDTDLKPRLHVNAPFVCQNNCPGQLFVKVAPNLTNEYDPDASANMSRIVTYSDFWWKGKLVFKAKLRASHTWNPIQQMSINVDNQFNYVPSNIGGMKIVYEKSQLAPRKLY
What is the function of this protein?
Capsid protein self-assembles to form an icosahedral capsid with a T=1 symmetry, about 22 nm in diameter, and consisting of 60 copies of two size variants of the capsid proteins, VP1 and VP2, which differ by the presence of an N-terminal extension in the minor protein VP1.  The capsid encapsulates the genomic ssDNA.  Capsid proteins are responsible for the attachment to host cell receptor TFRC.  This attachment induces virion internalization predominantly through clathrin-endocytosis.  Binding to the host receptors also induces capsid rearrangements leading to surface exposure of VP1 N-terminus, specifically its phospholipase A2-like region and nuclear localization signal(s).  VP1 N-terminus might serve as a lipolytic enzyme to breach the endosomal membrane during entry into host cell (By similarity).  Intracytoplasmic transport involves microtubules and interaction between capsid proteins and host dynein.  Exposure of nuclear localization signal probably allows nuclear import of capsids.
What are the official names of this protein?
Capsid protein VP1, Coat protein VP1.
What is the protein family that this protein belongs to?
Belongs to the parvoviridae capsid protein family.
What are the subcellular locations of this protein?
Virion. Host nucleus.
Protein: MIAB_YERPB
Sequence: MTKKLHIKTWGCQMNEYDSSKMADLLASTHGYQLTTIPEEADLLLLNTCSIREKAQEKVFSLLGQWKLLKEKNPQLIIGVGGCVASQEGEQLRQRAPCVDVIFGPQTLHRLPEMINHVQGTNSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDTSYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAMEISRKMVGTVQRVLVEGTSRKNVMELAGRTENNRVVNFEGSPDMIGKFVDVEIVNVYASSLRGILLRTEDQMDLRTHESPQSVIARTRKENEIGVGIYQP
What is the function of this protein?
Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
What are the official names of this protein?
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB, tRNA-i(6)A37 methylthiotransferase.
What is the protein family that this protein belongs to?
Belongs to the methylthiotransferase family. MiaB subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AKAP8_RAT
Sequence: MEQSYGGYGAWSAGPANTQGTYGSGVASWQGYENYSYYNAQNTSVPTGTPYSYGPASWEATKASDGGLAAGSSAMHVASFAPEPCTDNSDSLIAKINQRLDMLSKEGGRGGISSGGEGMQDRDSSFRFQPYESYDSRPCMPEHTPYRPSYSYDYDFDLGTDRNGSFGGTFNDCRDPTPERGALDGFLRGRGQGRFQDRSNSSTFIRSDPFMPPSASSEPLSTTWSELNYMGGRGLGGPSTNRPPPSLFSQSMAPDYSMMGMQGVGGFGGTMPYGCGRSQTRIRDWPRRRGFERFGPDNMGRKRKPFPLYEEPDAKLARADSEGDLSENDDGAGDLRSGDEEFRGEDDLCDSRKQRGEKEDEDEDVKKRREKQRRRDRMRDRAADRIQFACSVCKFRSFEDEEIQKHLQSKFHKETLRFISTKLPDKTVEFLQEYIINRNKKIEKRRQELLEKESPKPKPDPFKGIGQEHFFKRIEAAHCLACDMLIPAQHQLLQRHLHSVDHNHNRRLAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFVNETADLETEGDENLGEEKETPEEVAAEVLAEVITAAVKAVEGDGEPAAEHSDVLAEVEGPVDTAEAGSDSHTGKLLEEQTCETASETRNMEDMARGEAAEARNEAAVPAAAAGSPVPVIAIPGILEDELEQTDAEAKDTPTE
What is the function of this protein?
Anchoring protein that mediates the subcellular compartmentation of cAMP-dependent protein kinase (PKA type II) (PubMed:8125992).  Acts as an anchor for a PKA-signaling complex onto mitotic chromosomes, which is required for maintenance of chromosomes in a condensed form throughout mitosis.  Recruits condensin complex subunit NCAPD2 to chromosomes required for chromatin condensation; the function appears to be independent from PKA-anchoring.  May help to deliver cyclin D/E to CDK4 to facilitate cell cycle progression.  Required for cell cycle G2/M transition and histone deacetylation during mitosis.  In mitotic cells recruits HDAC3 to the vicinity of chromatin leading to deacetylation and subsequent phosphorylation at 'Ser-10' of histone H3; in this function may act redundantly with AKAP8L.  Involved in nuclear retention of RPS6KA1 upon ERK activation thus inducing cell proliferation.  May be involved in regulation of DNA replication by acting as scaffold for MCM2.  Enhances HMT activity of the KMT2 family MLL4/WBP7 complex and is involved in transcriptional regulation.  In a teratocarcinoma cell line is involved in retinoic acid-mediated induction of developmental genes implicating H3 'Lys-4' methylation.  May be involved in recruitment of active CASP3 to the nucleus in apoptotic cells.  May act as a carrier protein of GJA1 for its transport to the nucleus.  May play a repressive role in the regulation of rDNA transcription.  Preferentially binds GC-rich DNA in vitro.  In cells, associates with ribosomal RNA (rRNA) chromatin, preferentially with rRNA promoter and transcribed regions.  Involved in modulation of Toll-like receptor signaling.  Required for the cAMP-dependent suppression of TNF-alpha in early stages of LPS-induced macrophage activation; the function probably implicates targeting of PKA to NFKB1 (By similarity).
What are the official names of this protein?
A-kinase anchor protein 8, AKAP-8, A-kinase anchor protein 95 kDa, AKAP 95.
What is the protein family that this protein belongs to?
Belongs to the AKAP95 family.
What are the subcellular locations of this protein?
Nucleus matrix. Nucleus, nucleolus. Cytoplasm. Note=Associated with the nuclear matrix. Redistributed and detached from condensed chromatin during mitosis. Exhibits partial localization to the nucleolus in interphase, possibly to the fibrillary center and/or to the dense fibrillary component (By similarity).
Protein: DPRA_MYCTO
Sequence: MIDPTARAWAYLSRVAEPPCAQLAALVRCVGPVEAADRVRRGQVGNELAQHTGARREIDRAADDLELLMRRGGRLITPDDDEWPVLAFAAFSGAGARARPCGHSPLVLWALGPARLDEVAPRAAAVVGTRAATAYGEHVAADLAAGLAERDVAVVSGGAYGIDGAAHRAALDSEGITVAVLAGGFDIPYPAGHSALLHRIAQHGVLFTEYPPGVRPARHRFLTRNRLVAAVARAAVVVEAGLRSGAANTAAWARALGRVVAAVPGPVTSSASAGCHTLLRHGAELVTRADDIVEFVGHIGELAGDEPRPGAALDVLSEAERQVYEALPGRGAATIDEIAVGSGLLPAQVLGPLAILEVAGLAECRDGRWRILRAGAGQAAAKGAAARLV
What is the function of this protein?
May help load RecA onto ssDNA (By similarity).
What are the official names of this protein?
Putative DNA processing protein DprA.
What is the protein family that this protein belongs to?
Belongs to the DprA/Smf family.
Protein: LPTD_BURTA
Sequence: MPRKTLLPLVPACDAAPRRKRLAAALLAVPGLVPAVSQAQLSGAAAEPQTFGSPWDLRLAPQLDEHPQKQGGKPATFVLADHTGGTADQDLAAKGSAEIRRGNAVVKADAIHYDQDTDMADAYGKVTVANGGTTFSGPEAHLKVEANQGFMTTPKYHFTATGGSGSAERVQLLDSERSVFTNGTYTGCQCSTNPAWYIRGSEFDFDTGADEGVARNGVLFFQGVPLFGSPWLTFPLSGERRSGFLPPTFSPFSSTNGIEVSLPYYFNIAPNRDLTITPHIISKRGIFTQATFRYLSTNYSGALTGEYLPDDRIAHRNRYAIFWQHQQNFGNGFGGYIYYNKVSDNLYPEELGSTNQFVNGIQTVYQQEAGLTYNDGPWSVLGRYQHWQTLPPAVAPYGREPQLNVKYAKYNVGGFDFGAEADYSRFRITTADQPEGDRVMFNPYVSYGLYGPGYFFVPKAQLHIASYDLTTTTGGVPDQAKRFTYSIPTLSLDTGLVFDRSVRLFGQDYIQTLEPRLFYVYTPYRNQSNAPLFDTAVSDFGLAEIFTPNTFVGNDRIADANRLTAALTTRFINPATGDERARFVIAQQYYFTDQRVTLLPTEAPATARHSDLILGASVKLGAGFASETAFQYNVDNNQLVKSSVGFGYSPGERRVINVGYRYTRQNPTLSNEPINQILMSAQWPLTRRLYAVGRLNYDLASSRVVDGLVGFQYDADCWAFGVGVQRYANGLNTSGQQNSSTRVLAQLVLKGLTSIDNGLVTAFRAGVQGYTPLPPAPAPLSRFSNYD
What is the function of this protein?
Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
What are the official names of this protein?
LPS-assembly protein LptD.
What is the protein family that this protein belongs to?
Belongs to the LptD family.
What are the subcellular locations of this protein?
Cell outer membrane.
Protein: TARB_BACSH
Sequence: MKSWFAFFYYLFIKVIGALLFWVKLGNQVTLLVSFPDNARAILKEYQKGHFSFPIHVLLTQHAKSLEKEFPELTVSVINEKHPLHICKAVFSMLNSKTVIVDNYFVLTTVLTSRPDIECIQVWHANGAFKRFGLKDINTQNRSRADIRRFRKVYASFDRIVVGSEHMADIFKEFFDIKGDTFLRFGVPLTDAYYEARENSNDLKSKYQLPAEKKIILYAPTFRDHQFESFSLPFSEKQLQHDLKGEYLLAVKLHPVMKESAELPEDSAWIKDVSDLPLADLLKMSDLLISDYSSVPFEFALLDKPILFYTYDMEAYNRTRGLIRHYTEVIPGMPCCDSGMLLDQLKDMDKLQSEVERFSREWNLYSRGNASKQLLSYVNEKSN
What is the function of this protein?
Catalyzes the addition of a single glycerol phosphate residue to the prenoldiphosphate-linked disaccharide.
What are the official names of this protein?
Teichoic acid glycerol-phosphate primase, CDP-glycerol:N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase, Tag primase.
What is the protein family that this protein belongs to?
Belongs to the CDP-glycerol glycerophosphotransferase family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: ATPE_ANASK
Sequence: MALTLDIVTPEKRVLSVQVDEVRAPGVQGGFGVRLNHEPFMTALEPGRLTYVEGGREHHYAVGGGFLQVADNRVIVLADTAEAAGEIDVDRARKAFEDAQNRLLQLTEQDESHQAESARVRRAAARLTVAGR
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
ATP synthase epsilon chain, ATP synthase F1 sector epsilon subunit, F-ATPase epsilon subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase epsilon chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: FLIW_DESVV
Sequence: MARQNEIEIQTRIGRQRITLDKIIHFPRGLAGFEGRHDFTLLQLREGAPFLVLQSLDDPGLGLLVADPYSFLTDYQIRVGDPEQRLLKLENIRQVAVLVTVSIPAGQPEKTALNLTGPILINHRARIGLQVPQTDASLPPQFYLHMDDANGSTTVRRKASPPAAGEDKGDVQE
What is the function of this protein?
Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin.  Binds to flagellin and participates in the assembly of the flagellum.
What are the official names of this protein?
Flagellar assembly factor FliW.
What is the protein family that this protein belongs to?
Belongs to the FliW family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LPXB_SOLUE
Sequence: MPKILVSAGEASGDLYASLVVQELRRIMPDAEFFGCTGPRLRAAGVRTIVDSADLAVVGLIEVVAHIPRIYGEFRKLLRAAREERPLLAILTDSPDFHLRVARKLHRQEVPVVYLVAPQAWAWRRGRVREMRRTIRRLLCIFPFEEEFFRRYGVPATYIGHPLAGLVHPALSREEFFKKHRLAAERPLVSVLPGSRRGEAARHIPALLDAVDRIYREQAVNVVLPASATTGVAFFQERMGNSPIRVIEGESWDAMAHSDLALAASGTVTVEAALLGTPMVTFYKVTGVSWLAGKFLVDIPFYSMVNLIAGRAVVPELMQSQMTGENLAREALRLLQGGRDREEMKAGLAQVKEKLAGRTGAPGRAALAIQEILEGQVTHVS
What is the function of this protein?
Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
What are the official names of this protein?
Lipid-A-disaccharide synthase.
What is the protein family that this protein belongs to?
Belongs to the LpxB family.
Protein: PP180_ARATH
Sequence: MNMSSSSRKLSRLFNIVTQNQKSPVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHSPET
What are the official names of this protein?
Pentatricopeptide repeat-containing protein At2g32630.
What is the protein family that this protein belongs to?
Belongs to the PPR family. P subfamily.
Protein: RAB7_PRUAR
Sequence: MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNEPEEEIYLPDTIDVAGGGRQQRSSGCEC
What is the function of this protein?
Protein transport.  Probably involved in vesicular traffic (By similarity).
What are the official names of this protein?
Ras-related protein Rab7.
What is the protein family that this protein belongs to?
Belongs to the small GTPase superfamily. Rab family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor; Cytoplasmic side.
Protein: RS20_SHIF8
Sequence: MANIKSAKKRAIQSEKARKIIASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
What is the function of this protein?
Binds directly to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS20 family.
Protein: VTS1_ASHGO
Sequence: MMSGYNGDGVSSLPTRTQSPLARGAHPGAVLLSPKRTALGTLGGGAGGSSAQLMSPSQHSLSLNDILDQQAHPSRVDSSSAMSLDASIHQQQHTSGVGMLSPLLQPQASSISVKTAFLDSFGSRPSSAIGLQHGQGQGPDGPQSATGMSLNNSNIMVNFTNDVNQLCTWMSMLTSAQQNTVMDNLLSSLNEEVLQHTKLKLESLTNSGYLSPSLRPIASPIPSRVATLETSTQSASSAQLPGSLMLDSILSDSAAAGAGSTNSNNTNMASHSLAVNSMYRQWSPSPQMNSAQPMFDYLNDITRPRSAEPSRLRNGHTSHHQNGSHHIAMNSGNGAPPNSHSSTGHQVSSQAGGRFSNIKPQRPHSPTSLTKSTSSSSNFSEAQSPAAQPTSPGPSTPNAASNVSSSSNMNPKSLCDPKLLKNIPAWLKSLRLHKYSASLNGKSWQELIDLDDAILEDMGVSALGARRKLLKAFAIVKECKERGLVDESAY
What is the function of this protein?
RNA-binding protein involved in post-transcriptional regulation through transcript degradation.
What are the official names of this protein?
RNA-binding protein VTS1.
What is the protein family that this protein belongs to?
Belongs to the VTS1 family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol. Cytoplasm, P-body.
Protein: RL22_PORG3
Sequence: MGARKHNSAEARKEALKQMYFAKLRNVPTSPRKMRLVADMIRGMEVNRALGVLKFSNKEASARVEKLLRSAVANWEEKNERKAEEGELFVSRICVDGASTLKRLRPAPQGRGYRIRKRSNHVTIYVDTLNNDNN
What is the function of this protein?
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L22.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: TRPA_ACIF2
Sequence: MSRLAGLFVQLRDAGRAALIPFMTAGDPSLTATVPLMHALVAAGADAIELGMPFSDPMADGPSIQRASERALARGVKLRMVLEWVREFRTTNSHTPVILMGYLNPVEAMGITSFAEAAATAGVDGVILVDLTPEEGRGEAVVLRQRGIDPIFLLAPTSGPERVATVRSMGSGFVYYVSLRGITGAAQADWAEVLERVQHLHRQLGLPVAIGFGIRDAATVARVATGADAVVVGSALVDQLAACATDQEAIAAAIRFVEPLAQAVRSTERRGA
What is the function of this protein?
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.
What are the official names of this protein?
Tryptophan synthase alpha chain.
What is the protein family that this protein belongs to?
Belongs to the TrpA family.
Protein: PROA_ACIBY
Sequence: MQDSIEQYMQKVGQQARDASRVLTSASTSLKNHALSAIYTALENNQAAILAANQIDMEKGRSNQLDSALLDRLELTPARFKGMLQGLKDVIALVDPIGEITDLAYRPTGIQIGKMRVPLGVVGMIYESRPNVTLEAASLAIKSGNAIILRGGSEALESNKAIAEAVKHGLKVAGLPEHSVQVIETSDRAAVGHLITMAEYVDVIVPRGGKSLIERVTNEARIPVIKHLDGNCHVFVEAQADLQKALPITLNAKTHRYGVCNAMETLLVDEKIAEVFLPHIAELYAEKQVELRGCPETRRILGSSVKPATEEDWYTEYLGPILAVKVVSGIDEAIDHINKYGSHHTDAIVTENYTLARQFLARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQIRQ
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate.  The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
What are the official names of this protein?
Gamma-glutamyl phosphate reductase, GPR, Glutamate-5-semialdehyde dehydrogenase, Glutamyl-gamma-semialdehyde dehydrogenase, GSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the gamma-glutamyl phosphate reductase family.
What are the subcellular locations of this protein?
Cytoplasm.