PharMolix/UniProtQA huggingface dataset:
Protein: CBRA_DICD3
Sequence: MNEYLVSRRRLLRLSLSLLPLGLGRPALAQSLFMPQRVITLFQGATDTAVALGITPAGVVDSWSEKPMYRYLRQALAGVPHVGLETQPSLEDIVLLKPDAIVASRFRHQRLEPLLSQIAPVVMLDEIYQFKKTVQVMGQALQRQAVADQLLQNWQLRVNGLREQLQRKFGGDWPPTVSILDIREDHIRSYLPGSFPGSVLSELGFGWSDASRAQPGVSLKLTNKESIPVVDADIFFIFLRSESPSVQRNYESLIRHPLWQQLRAPRRNQVWVVNGVTWSLSGGILGANMMLDDIARVTGIAGGVS
What is the function of this protein?
Binds citrate- or chloride-dependent Fe(3+); part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin.
What are the official names of this protein?
Achromobactin-binding periplasmic protein.
What is the protein family that this protein belongs to?
Belongs to the bacterial solute-binding protein 8 family.
What are the subcellular locations of this protein?
Periplasm.
Protein: RL3_ACIC1
Sequence: MPKQVKGLLGEKLGMTQVFDESGRVIPVTVVRAGPCVVTQVRTPDRDGYSAVQLGYGAVDPRRVNKPLAGHFRAAGVTPRRYLAEVRTGDAAEYTVGQEVTVEIFTPGQRVDVAGVSKGKGFAGLMKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAVKPEENLLLLQGAVPGPNGGLVYVRTAAKGKANRDGGAA
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
What are the official names of this protein?
50S ribosomal protein L3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL3 family.
Protein: RECO_OCEIH
Sequence: MLEKIDGIIIKTKDYGETHKLVTIFSNKIGKFNALAKGAKKPKSRMAAVTQPFINARFFVYIGSGLSTIQQGEVLDSFRIIREDIFKTAYVSYMAELTDKLLDAKENDPFLYEQFYQTLLWINNQDEVDIPVIMYELKLYKKAGFAPVLHQCSRCGNQEGLSKFSIREGGMLCQQCAYFDPEAIHISEKLSRLLYLFSEVDLKRIGNIRMKKENVQLIRKILYEYYDQYGGFWIKSRKVLDQLDFFIPNVKNGNSYNE
What is the function of this protein?
Involved in DNA repair and RecF pathway recombination.
What are the official names of this protein?
DNA repair protein RecO, Recombination protein O.
What is the protein family that this protein belongs to?
Belongs to the RecO family.
Protein: ENDUA_DANRE
Sequence: MKIILILCLSITLISQGHFDSLDLSLANVSDAEIKSLSETLYKLDSNRATASELLIDPQTLIPSSQTGSGNDLSPQPLFKVVSSTLLSKPTYEAFLDLLDNYKKMTGEVEDVPSHEEQEQDSFLQQTMNTNLGKELFNFLHSKGVYGSQSEFLQDLKMMWFGLYSRSDGVKLDSSGFEHIFVGEIKGGKVSGFHSWVQFYQCEKQGILNYYSHSFDGPWTTYPDVLGMQFNWDGYFKELGSAFIGCSPEFDLAIYSLCYITRPGKKCDVSLGGHSLGIQTYTWDKSSYGDGKKFIGSAYPITP
What is the function of this protein?
Endoribonuclease that cleaves single-stranded RNAs at 5' of uridylates and releases a product with a 2',3'-cyclic phosphate at the 3'-end.  The UU and GU sites are more efficiently cleaved than CU and AU sites.
What are the official names of this protein?
Uridylate-specific endoribonuclease A, Protein endoU-A.
What is the protein family that this protein belongs to?
Belongs to the ENDOU family.
What are the subcellular locations of this protein?
Secreted.
Protein: FIS_BUCA5
Sequence: MLEKKTNTEFLVLSTTNTQDKNIKQPLCELVKKSLKYYLSNLNGKDVNNLYELALSELEQPLLDMIMQYTRGNQTRAALMLGINRSTLRKKLKKYSMN
What is the function of this protein?
Activates ribosomal RNA transcription.  Plays a direct role in upstream activation of rRNA promoters.
What are the official names of this protein?
DNA-binding protein Fis.
What is the protein family that this protein belongs to?
Belongs to the transcriptional regulatory Fis family.
Protein: YB40_YEAST
Sequence: MSLNIAFFPAARTCSEPRKSTAAKPPLMCWPTATSGRAGSPGSGGGHNTRAGKVNGLCASVKFYHQWSVMSGKDNIESSVQFQALPIELWNKRTKTKITSNNG
What are the official names of this protein?
Putative uncharacterized protein YBR190W.
Protein: RS13_LISMO
Sequence: MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREILDRIKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: SKGA_CAUVN
Sequence: MSVYTVKQMARLSGVSVRALHHYDAIGLLKPRAVGANGYRYYDRQDLLRLQQILFHRALETPLKDIQAALDQPGFDLAAALRAQRERLAAQAERYARLVDVVDRTLADLEGDETMDDKHLFEGFDPEKQARHEAWLVEHYGDEATRRIADAKAGMKSWGKKDWSQFQEEAKAIEHDLAKALTQGLPVDSAPVTAIMRRHWAWVGRSWNREPTPDAFAGLGHLYQANPEFTARYEAIAPGLTEYFSEAMRAFARGR
What is the function of this protein?
Regulates the induction of katG (catalase-peroxidase) in stationary phase.
What are the official names of this protein?
HTH-type transcriptional regulator SkgA, Stationary-phase regulation of KatG protein.
Protein: RL34_CELJU
Sequence: MKRTFQPSNIKRVRNHGFRARMATKNGRLVLARRRAKGRKQLTRV
What are the official names of this protein?
50S ribosomal protein L34.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL34 family.
Protein: IOLJ_BACLD
Sequence: MAFVSMKELLQEAKEHHYAIGQFNINGLQWTKAILEAAEEERSPVIAAASDRLIDYLGGFKTVSAMVAALIEEMSISVPVVLHLDHGKSPERCKQAIDAGFSSVMIDGSHSPIDENIAMTKEVVSYAGVRNVSVEAEVGTVGGMEDGLIGGVQYADIGECERIVKETGIDALAAALGSVHGKYQGEPNLGFKEMEEISRVTDIPLVLHGASGIPADQIARTIRLGHAKININTECMVAWTEKTRSIFKDNPDLYEPRAYMTPGISAVKETVKHKMREFGSSGKAVCTQKIEI
What is the function of this protein?
Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP).
What are the official names of this protein?
6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase, DKGP aldolase.
What is the protein family that this protein belongs to?
Belongs to the class II fructose-bisphosphate aldolase family. IolJ subfamily.
Protein: RPOA_RALPJ
Sequence: MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAGVVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEIINPGHVIANLSAGGKLDLQLKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFAPVRRVSYAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAAAARAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLEK
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit alpha, RNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase alpha chain family.
Protein: AMPPA_METLZ
Sequence: MNLILDMIDISTPVILLNDTDARQIGVLEGDRVTITRIKTKHTIAAPVSITKTLTSQGTATISLGTNENLAAEKGDEIEIRAAPRPASIAFIRKKMDGGKFTREETATIISDMSSNVLSPSEITAYITAAYINGLDMDEVEFLTREMVASGEQITFSKKPVVDKHSIGGVPGNKITLLVVPVIAASGLLIPKTSSRAITGAGGTADLMEALAPVAFSAAEIKTMTEKAGGVIVWGGATNIAPADDMIVTYEYPLKIDARGQMLASIMAKKMAVGSDTCVIDIPIGPGTKIPDEAEGRVLANELITLGNRLGIRVECAVTFGGSPIGRNIGVNLEVSEALSLLEGKRGANSLVQKSVAIAGIALEMTGKTGADSGAEAAYDIIKKGKALKKMLDIIEIQGGDPKVKSTDFPVGEHTFVVPAASDGYVVSVKNQALISIARAAGSPVDHGAGLHLHKKPGEYVKRGEPLLTIYAERGWRLTRAIEEARTSYPVLVEGMLLERISSNR
What is the function of this protein?
Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P).  Exhibits phosphorylase activity toward CMP and UMP in addition to AMP.  Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO.
What are the official names of this protein?
AMP phosphorylase, AMPpase, Nucleoside monophosphate phosphorylase, NMP phosphorylase.
What is the protein family that this protein belongs to?
Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
Protein: KTHY_LISMH
Sequence: MKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAVGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA
What is the function of this protein?
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.
What are the official names of this protein?
Thymidylate kinase, dTMP kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate kinase family.
Protein: RL33_RICTY
Sequence: MAKKNKNVLVRLVSTAGTGVFWVKKRNPKTQTEKLSFRKYDKVVRKHVIFKEEKIK
What are the official names of this protein?
50S ribosomal protein L33.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
Protein: MQO_WIGBR
Sequence: MNKKNHEDSNSFKKYSAIKENDSVDVVLIGSGIMSATLGIYLKLLEPNWIIHSYERLNKVGQESSNAWNNAGTGHSAFCELNYTSINKDGSINISKAIKVNESFEISKQLWAYLIKEKILVNSSSFINTVPHMSFVWGENNINFLKKRFFYLKQNALFKDMLYSENYDIIKKWAPLIMEGRSINEKVAATRMEIGTDVNFGEITKQIFYYLKNKSNFFLYLNHDVIDIIRNKDKTWCLKVVDNILKKTIKINSKYVFIGSGGGALKLLQKSKIEQSIGYAGFPVGGQFLVTKNKKLTNNHQAKVYGKSPIGAPPMSVPHIDTRIINGEKVLLFGPFATFSSKFLKNGSYFDLFSSLTKENIIPILQVGINNFNLVKYLINQLLKSKRGKFNDLCKYLPTAKMKDWSLITAGQRVQIIKKDIEKGGILEFGTEIINSKDCTLSALLGASPGASTSASTMLDLLKIMFYDKINKSEWKSKLNKIFISYNKKIHESYEYTLEIRNYTSKILSL
What are the official names of this protein?
Probable malate:quinone oxidoreductase, MQO, Malate dehydrogenase [quinone].
What is the protein family that this protein belongs to?
Belongs to the MQO family.
Protein: QOX1_STAAC
Sequence: MNFPWDQLLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLYKEWFTSVDHKKIGVMYLICAVLMFVRGGIDALLIRAQLTVPDNKFLESNHYNEIFSTHGVIMIIFMAMPFIFGLWNIVVPLQIGARDVAFPVLNNVSFWLFFAGMILFNLSFIIGGSPAAGWTNYAPLAGEFSPGPGVNYYLIAIQISGLGTLATGINFFVTILRCKTPTMKFMQMPMFTVTTFITTLIVILAFPPLTVALALMTTDRIFDTAFFTVAHGGMPMLWANFFWVWGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMGNGALINSFFSISTMLIGIPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVTGVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNETLNKWCFWFFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWFLLNLISTIGALLMAIGFLFLVVSIVYSHFKSPREATGDNWDGLGRTLEWTTASAIPPKYNFAITPDWNDYDTFVDMKEHGRHYLDNHNYKDIHMPNNTPVGFWIGIFMTIGGFFLIFETVIPALICLFGIFGTMIYRSFQIDHGYHIPAAEVAETEARLREARIKEREAVSHES
What is the function of this protein?
Catalyzes quinol oxidation with the concomitant reduction of oxygen to water.
What are the official names of this protein?
Probable quinol oxidase subunit 1, Quinol oxidase polypeptide I.
What is the protein family that this protein belongs to?
Belongs to the heme-copper respiratory oxidase family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: AGT_AEDAE
Sequence: MEYKVTPPAVLREPLVTPNKLLMGPGPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKPDVQVKGKM
What is the function of this protein?
Catalyzes the pyridoxal 5'-phosphate-dependent transamination of alanine with glyoxylate as an amino group acceptor (PubMed:16681462).  Can also catalyze, although with much less efficiency, the transamination of serine, and histidine with glyoxylate and the and transamination of glycine with pyruvate as an amino group acceptor (PubMed:16681462).  Does not catalyze the transamination of both 3-hydroxykynurenine and L-kynurenine (PubMed:16681462).  May play a role in the detoxification of glyoxylate, a toxic plant metabolite from the pupae and adult diet (Probable).
What are the official names of this protein?
Alanine--glyoxylate aminotransferase.
What is the protein family that this protein belongs to?
Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
What are the subcellular locations of this protein?
Peroxisome.
Protein: ACTN_ACTCC
Sequence: MGLPKSFVSMSLLFFSTLLILSLAFNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNQYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNVGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFIGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPVKYNNQNHPKSYSSLINPPAFSMSNDGPVGVDDGQRYSA
What is the function of this protein?
Cysteine protease responsible for the cleavage of kiwellin into kissper and KiTH.
What are the official names of this protein?
Actinidain, Actinidin.
What is the protein family that this protein belongs to?
Belongs to the peptidase C1 family.
Protein: NIC1_ARATH
Sequence: MANHETIFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEESAKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRRKDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLSPVEDVVVYSRGCATFDLPLHVAKDIKGAQAHPQELMHHVGLYMAKGRGAQVVSKISFET
What is the function of this protein?
Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway.  Prevents the accumulation of intracellular nicotinamide, a known inhibitor of poly(ADP-ribose) polymerases (PARP enzymes).
What are the official names of this protein?
Nicotinamidase 1, AtNIC1, Nicotinamide deamidase 1.
What is the protein family that this protein belongs to?
Belongs to the isochorismatase family.
Protein: KTHY_METHJ
Sequence: MLVTIEGIDGSGKSTLHKALGPYLADLNPVITCEPGSTWIGEAVRRAIREHADPIAEALLFVADHAAHLREVVRPALSEDRLVISDRYIDSRLVYQQVTLDGIIPDPRTWLRAVHQGWTIMPDLTILLAVPVPVALERTGKRGSGEHFEQESVLTKVQEYYMQLVEEDTARFLILDGTLPPEHILKVAGEAIRFRFDEMNRKKKKS
What are the official names of this protein?
Probable thymidylate kinase, dTMP kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate kinase family.
Protein: PFKA_MYCPN
Sequence: MSPKTTKKIAILTSGGDAPGMNATLVYLTRYATSSEIEVFFVKNGYYGLYHDELVPAHQLDLSNSLFSAGTVIGSKRFVEFKELKVREQAAQNLKKRQIDYLVVIGGDGSYMGAKLLSELGVNCYCLPGTIDNDINSSEFTIGFLTALESIKVNVQAVYHTTKSHERVAIVEVMGRHCGDLAIFGALATNADFVVTPSNKMDLKQLESAVKKILQHQNHCVVIVSENIYGFDGYPSLTAIKQHFDANNMKCNLVSLGHTQRGFAPTSLELVQISLMAQHTINLIGQNKVNQVIGNKANVPVNYDFDQAFNMPPVDRSALIAVINKNII
What is the function of this protein?
Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
What are the official names of this protein?
Probable ATP-dependent 6-phosphofructokinase, ATP-PFK, Phosphofructokinase, Phosphohexokinase.
What is the protein family that this protein belongs to?
Belongs to the phosphofructokinase type A (PFKA) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PP62_ASFWA
Sequence: MPSNMKQFCKISVWLQQHDPDLLEIINNLCMLGNLSAAKYKHGVTFIYPKQAKIRDEIKKHAYSNDPSQAIKTLESLILPFYIPTPAEFTGEIGSYTGVKLEVEKTEANKVILKNGEAVLVPAADFKPFPDRRLAVWIMESGSMPLEGPPYKRKKEGGGNDPPVPKHISPYTPRTRIAIEVEKAFDDCMRQNWCSVNNPYLAKSVSLLSFLSLNHPTEFIKVLPLIDFDPLVTFYLLLEPYKTHGDDFLIPETILFGPTGWNGTDLYQSAMLEFKKFFTQITRQTFMDIADSATKEVDVPICYSDPETVHSYTNHVRTEILHHNAVNKVTTPNLVVQAYNELEQTNTIRHYGPIFPESTINALRFWKKLWQDEQRFVIHGLHRTLMDQPTYETSEFAEIVRNLRFSRPGNNYINELNITSPAMYGDKHTTGDIAPNDRFAMLVAFINSTDFLYTAIPEEKVGGNETQTSSLTDLVPTRLHSFLNHNLSKLKILNRAQQTVRNILSNDCLNQLKHYVKHTGKNEILKLLQE
What is the function of this protein?
Component of the core shell.
What are the official names of this protein?
Polyprotein pp62, 60 kDa polyprotein, p60, 62 kDa polyprotein, p62.
What is the protein family that this protein belongs to?
Belongs to the asfivirus polyprotein pp62 family.
What are the subcellular locations of this protein?
[Polyprotein pp62]: Host cytoplasm, host perinuclear region. Note=Found in perinuclear cytoplasmic viral factories during assembly. SUBCELLULAR LOCATION: [p35]: Virion. Note=Located in the core shell, which functions like a matrix between the DNA and the inner envelope. SUBCELLULAR LOCATION: [p15]: Virion. Note=Located in the core shell, which functions like a matrix between the DNA and the inner envelope. SUBCELLULAR LOCATION: [p8]: Virion. Note=Located in the core shell, which functions like a matrix between the DNA and the inner envelope.
Protein: RNPH_DEHMB
Sequence: MQRGDGRNFNQLRPITITPGFQSFAEGSVLIEQGKTRVICSVSMEDRVPQFLRNSGTGWVTAEYSMLPRSTVTRTQRDSSAGKISGRSQEIQRLIGRSLRSCVDMAALGERSFIVDCDVIQADAGTRTASITGSYIALYLAFKKMVDMGILSKMPFTSQVAAVSVSIFKGNIVLDPCYDEDFQAEVDFNLVMNDRGEFVEIQGTAEGKAFSRDTLDQVLKLGEAGIRQLFDIQKGITQPQL
What is the function of this protein?
Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation.  Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important.  Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
What are the official names of this protein?
Ribonuclease PH, RNase PH, tRNA nucleotidyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNase PH family.
Protein: RPOA_COXB2
Sequence: MQNVLKSFLTPKNIQVQTISPCHFRILLEPLERGFGHTLGNALRRILLSSMPGAAIVQAEIDGVLHEYSSIEGVREDVVDVLLNLKGVAIKLEGREDAKLTLHKKGAGTVTAGDIQTESGVKIVNPDHVIAHITKDGEINMTLKAAMGRGYEPSSARSTGDQSRSVGLLLLDASYSPIRRVTYSVENARVEKRTDLDKLIIDLETDGTLDPEEAIRFAAAVLQHQLAAFVDLKQESDRDGGGKEGKVNPLLLRPVEDLELTVRAANCLKAESINYIGDLVQCTENDLLKTPNLGKKSLLEIKSVLAQKGLSLGMDLKGWPPADLTDQ
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit alpha, RNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase alpha chain family.
Protein: CLPP_MOOTA
Sequence: MSVLVPMVVEQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVITKRELPAK
What is the function of this protein?
Cleaves peptides in various proteins in a process that requires ATP hydrolysis.  Has a chymotrypsin-like activity.  Plays a major role in the degradation of misfolded proteins.
What are the official names of this protein?
ATP-dependent Clp protease proteolytic subunit, Endopeptidase Clp.
What is the protein family that this protein belongs to?
Belongs to the peptidase S14 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS17_CHLTE
Sequence: MSSGAETRGRKKSWLGKVVSDSMDKGIVVAVERRVQHPVYKKYFKKTTRLMAHDENNEAGVGDLVRITECRPLSKNKSCRLVEIVEKAK
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: GCH4_STAAB
Sequence: MTEFDLSTREGRWKHFGSVDPIEGTKPTTKNEMTDLQSTHKDFLFEIEEVGIKNLVYPVLVDQYQTAGTFSFSTSLTKDEKGINMSRIIESVEKHYDNGIELEFNTLYQVLRTLQTNMKQNAAGVDVSGKWFFDRYSPTTNIKAVGNADVTYGLAIDGDKVTRKELTIEATVTTLCPCSKEISEYSAHNQRGVVTVKTYINKDQDIVDDYKNKILDAMEANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVEFDWLDGFDIECRNEESIHQHDAFAKLKYRK
What is the function of this protein?
Converts GTP to 7,8-dihydroneopterin triphosphate.
What are the official names of this protein?
GTP cyclohydrolase FolE2.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase IV family.
Protein: TRUD_KLEP7
Sequence: MIAFDQLTWLHGKPQSSGLLKANPEDFLVVEDLGFAPDGEGEHVLVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRKLRLGALKGNQFTVILREISDRQDVETRLQAIAERGVPNYFGAQRFGIGGSNLQGALRWAESGAPVRDRNKRSFWLSAARSALFNQQVSIRLKKTEFNQVVDGDALQLAGRGSWFVVTPEELEVSQARVHNRELMITATLPGSGDWGSQRDALAFEQAAIAEETALQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
What is the function of this protein?
Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase D, tRNA pseudouridine(13) synthase, tRNA pseudouridylate synthase D, tRNA-uridine isomerase D.
What is the protein family that this protein belongs to?
Belongs to the pseudouridine synthase TruD family.
Protein: DEF64_ARATH
Sequence: MWGRQIVLKIFFLVLSCVIVIETERIDICFIPCTRRYGDYECWFDCTYNRYKEGGCVEDVVVKHNRNRPTFRAVELCFFSIKFMYDFSMK
What are the official names of this protein?
Putative defensin-like protein 64.
What is the protein family that this protein belongs to?
Belongs to the DEFL family.
What are the subcellular locations of this protein?
Secreted.
Protein: MSRA_METM6
Sequence: MTNTETAVFGMGCFWSAEELFRKINGVISTEVGFMGGNIKNPTYGQVCRGRSGHIEVVNIIYNPKILKYDDLLELFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQKLLAEKSFEKIQKNSELKIVTAIRKASDFFPAEEYHQKYFMKKNNCILNF
What is the function of this protein?
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation.  Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
What are the official names of this protein?
Peptide methionine sulfoxide reductase MsrA, Protein-methionine-S-oxide reductase, Peptide-methionine (S)-S-oxide reductase, Peptide Met(O) reductase.
What is the protein family that this protein belongs to?
Belongs to the MsrA Met sulfoxide reductase family.
Protein: CLE21_ARATH
Sequence: MLILSSRYAMKRDVLIIVIFTVLVLIIISRSSSIQAGRFMTTGRNRNLSVARSLYYKNHHKVVITEMSNFNKVRRRSSRFRRKTDGDEEEEEKRSIPTGPNPLHNK
What is the function of this protein?
Extracellular signal peptide that regulates cell fate.  Represses root apical meristem maintenance.  Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033).
What are the official names of this protein?
CLAVATA3/ESR (CLE)-related protein 21.
What is the protein family that this protein belongs to?
Belongs to the CLV3/ESR signal peptide family.
What are the subcellular locations of this protein?
[CLE21p]: Secreted, extracellular space.
Protein: BENM_ACIAD
Sequence: MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKISDPAIKRTLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPASTQSIQLFNLSYVPLLDPDAITPIYIAVRNMEESTYIYSLYETIRQIYAYEGFTEPPNW
What is the function of this protein?
Positive regulator of the ben and cat genes for benzoate degradation.  BenM is necessary for ben gene expression but not for expression of the cat genes, which can be regulated by CatM.  Binds to the inducers cis,cis-muconate and benzoate.
What are the official names of this protein?
HTH-type transcriptional regulator BenM, Ben and cat operon transcriptional regulator.
What is the protein family that this protein belongs to?
Belongs to the LysR transcriptional regulatory family.
Protein: AROE_LEPCP
Sequence: MDRYAVAGYPVKHSRSPAIHSQFAAQTGEPLVYEKLEVLPGTFVASVQAFQAAGGRGCNVTVPYKLEAFEAAARRTPRAEMAQAINTLRFDADGWTGDNTDGAGLVRDIEVNGGVSLRGRRVLLIGAGGAASGALAPLIEAGPAELVMCNRTVARAQQSVQRHAELARARGVALSAATLDDCGSGFDVIINATSSSLAGMPSPVGAQVLRPGSLVLDMMYGPAAKPFLAWAQSHGATARDGLGMLIEQAAEAFFFWRGVRPATDGVMAGIRAELDAA
What is the function of this protein?
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids.  Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
What are the official names of this protein?
Shikimate dehydrogenase (NADP(+)), SDH.
What is the protein family that this protein belongs to?
Belongs to the shikimate dehydrogenase family.
Protein: LIF_BOVIN
Sequence: MKVLAAGVVPLLLVLHWKHGAGSPLPITPVNATCATRHPCPSNLMNQIRNQLGQLNSSANSLFILYYTAQGEPFPNNLDKLCSPNVTDFPPFHANGTEKARLVELYRIIAYLGASLGNITRDQKVLNPYAHGLHSKLSTTADVLRGLLSNVLCRLCSKYHVSHVDVTYGPDTSGKDVFQKKKLGCQLLGKYKQVIAVLAQAF
What is the function of this protein?
LIF has the capacity to induce terminal differentiation in leukemic cells.  Its activities include the induction of hematopoietic differentiation in normal and myeloid leukemia cells, the induction of neuronal cell differentiation, and the stimulation of acute-phase protein synthesis in hepatocytes (By similarity).
What are the official names of this protein?
Leukemia inhibitory factor, LIF, bLIF.
What is the protein family that this protein belongs to?
Belongs to the LIF/OSM family.
What are the subcellular locations of this protein?
Secreted.