PharMolix/UniProtQA huggingface dataset:
Protein: PHAC1_PSEOL
Sequence: MSNKNNDELQRQASENTLGLNPVIGIRRKDLLSSARTVLRQAVRQPLHSAKHVAHFGLELKNVLLGKSSLAPESDDRRFNDPAWSNNPLYRRYLQTYLAWRKELQDWIGNSDLSPQDISRGQFVINLMTEAMAPTNTLSNPAAVKRFFETGGKSLLDGLSNLAKDLVNNGGMPSQVNMDAFEVGKNLGTSEGAVVYRNDVLELIQYKPITEQVHARPLLVVPPQINKFYVFDLSPEKSLARYCLRSQQQTFIISWRNPTKAQREWGLSTYIDALKEAVDAVLAITGSKDLNMLGACSGGITCTALVGHYAALGENKVNALTLLVSVLDTTMDNQVALFVDEQTLEAAKRHSYQAGVLEGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNNDTTRLPAAFHGDLIEMFKSNPLTRPDALEVCGTPIDLKQVKCDIYSLAGTNDHITPWQSCYRSAHLFGGKIEFVLSNSGHIQSILNPPGNPKARFMTGADRPGDPVAWQENATKHADSWWLHWQSWLGERAGELEKAPTRLGNRAYAAGEASPGTYVHER
What is the function of this protein?
Synthesizes poly(3-hydroxyalkanoates) (PHA), complements a mutant of P. putida that does not make PHA.
What are the official names of this protein?
Poly(3-hydroxyalkanoate) polymerase 1, PHA polymerase 1, ORF1, Polyhydroxyalkanoic acid synthase 1, PHA synthase 1.
What is the protein family that this protein belongs to?
Belongs to the PHA/PHB synthase family. Type II PhaC subfamily.
Protein: PYRB_THEAC
Sequence: MLKNRSVVSIEDVDIDDLNDLFDLSDSMLKTIEKGGSTDLLRNRIMATLFYEPSTRTRLSFESAMHRLGGSVITVSDVKTSSVAKGETLADTIRMASSYSDIIVIRHPLEGAARLASKFANKPVINAGDGSGQHPTQTILDLYTIKRETGSIDGKTITMVGDLRYGRTIHSLIIALSRFDVRINLVSPQILKLPEYVLTKIGDRSRIMEYDDLSKVIEDTDVLYVTRIQKERFSDQNEYQSVIGSYSVDRDLVSRMKKDAIIMHPLPRIDEIKPEVDELPQARYFKQAYYGVPVRMALIYRILGD
What are the official names of this protein?
Aspartate carbamoyltransferase, Aspartate transcarbamylase, ATCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
Protein: G2OX6_ORYSJ
Sequence: MPAFADIAIDPPLADSYRALALLRRDRDGGIAPPAVQMVGSGGAVLERDLPMVDLERLTRGGAGERKACAGAMARAASEWGFFQLTNHGVGRELMEEMRREQARLFRLPFETKEKAGLLNGSYRWGNPTATSLRHLSWSEAFHVPLASISGADCDFGDLTSLRGVMQEVAEAMSRVANTVAAALAEELTGRGGGGASAAPWFPAGCDETTCFLRLNRYPACPFAADTFGLVPHTDSDFLTVLCQDQVGGLHLMKDSRWVAVRPRPDALVVNIGDLFQAWSNNRYKSVEHKVVANAKTDRLSVAYFLCPSYDSLVGTCGEPSPYRAFTFGEYRKKVQEDVRTTGKKIGLPNFFKHSSVQ
What is the function of this protein?
Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level.  Catabolism of gibberellins (GAs) plays a central role in plant development (PubMed:18952778, PubMed:20171575).  In vitro, converts GA12 and GA53 to the corresponding 2-beta-hydroxylated products GA110 and GA97, respectively.
What are the official names of this protein?
Gibberellin 2-beta-dioxygenase 6, Gibberellin 2-beta-hydroxylase 6, Gibberellin 2-oxidase 6, GA 2-oxidase 6, OsGA2ox6.
What is the protein family that this protein belongs to?
Belongs to the iron/ascorbate-dependent oxidoreductase family. GA2OX subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: CYB6_PROM4
Sequence: MANSSPVYDWFQERLEIQDIADDVTSKYVPPHVNIFYCLGGITLVCFLIQFATGFAMTFYYKPTVTEAYSSVSYLMTDVSFGWLIRSVHRWSASMMVLMLILHVFRVYLTGGFKRPRELTWVTGVVMAVITVAFGVTGYSLPWDQVGYWAVKIVSGVPAAIPVVGDFMVELLRGGESVGQTTLTRFYSLHTFVLPWTLAVFMLMHFLMIRKQGISGPL
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
What are the official names of this protein?
Cytochrome b6.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family. PetB subfamily.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Multi-pass membrane protein.
Protein: TRPD_BLOPB
Sequence: MQKILDTLYQGKNINQKQSEALLHSIIKEKLSAIQIASALISMKIRGETFEEIIGAVNILLTHAKPFPRPNSLFADITGTGGDNSNTINISTTSAIVAATCGAKIIKHGNRSISSLTGSMDLLKQHCLILNSPQQARKNFDELGICFLYAPQYYTVLHRIMPIRKQLKIPTLFNIVGPLINPSKPPLTLIGVYKKELLSPIIRILQLLKYNHAIVVHCGGIDEVGLHSPTHIAELHNSIINNYILTASDFGLDSYPIEILRCYSRKQAREYMINILKGRGKPAHSAVIAANVALLLKLFGYTDLRANAQLALEKIHYGIPYTLLSSLSETKIQNHATHNTR
What is the function of this protein?
Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
What are the official names of this protein?
Anthranilate phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the anthranilate phosphoribosyltransferase family.
Protein: COXX_STRAW
Sequence: MLTTSSSRGQRPFGARVKAFVALTKPRIIELLLITTVPVMFLAEQGVPSLRLVLLTCLGGYLSAGGANALNMYIDRDIDALMERTSQRPLVTGMVSPRECLAFGITLAVVSTLLFGLTVNWLSAWLSLGALLFYVVVYTMILKRRTSQNIVWGGIAGCLPVLIGWSSVTDSMSWAPVILFLVMFFWTPPHYWPLSMKVKDDYARVGVPMLPVVASNKVVARQIVIYSWVMVGVSLLLTPLGYTGWFYTLVALLAGGFWLWEAHGLQNRAKAEVTGGKLKEMRLFHWSITYVSILFVAVAVDPFLR
What is the function of this protein?
Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
What are the official names of this protein?
Protoheme IX farnesyltransferase, Heme B farnesyltransferase, Heme O synthase.
What is the protein family that this protein belongs to?
Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: NAAT1_DROVI
Sequence: MELKTMPQNGANAGTQHNNNSNNKPDNNEKEAQKKEPERTNWSNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIIGQFTSQGTVKIWSICPSFMGVGYGQAFATICIITYYSSLLALTVYYLFVSFQSELPWSYCRDDWVNCVNSRPAEYVETLLTNASSALSRATESATNVTKLQSSSELYFLNVVIKEKSDITDGIGAPDWKLTIALFVSWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFALLGRAVTLEGAVDGIIFFLQPQWGELLNPIVWKEAVVQCFFSLAVGCGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLAHNLKVDNIRDVVRSGTGLAFISYPDAISKFQAVPQLFSALFFFMLFVLGIGSIVALQSTIVTIICDQFKTCKYWKVAMATSICGFLMGLVYVTPGGQWILTLVDFYGGTYVVFILAIFELAGIVWIYGLQNFCDDIEFMSNKKVSLYWRICWSFFTPIMMIVIFIYSMVTISPIKYSDTYFPVAGDVAGWVLFAVGAAQFPLWGWWYIRTHRHDSFSKSFMASLKPSEKWGPSNPETRRDWLLFKSDLAAKRAIQAKSNKMGFFRQKLYNLCGNSN
What is the function of this protein?
Unusual broad substrate spectrum amino acid:sodium cotransporter that promotes absorption of the D isomers of essential amino acids.  Neutral amino acids are the preferred substrates, especially methionine and phenylalanine (By similarity).
What are the official names of this protein?
Sodium-dependent nutrient amino acid transporter 1.
What is the protein family that this protein belongs to?
Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: PFP_MASBA
Sequence: MVKTVALLTAGGLAPCLSSAVGGLIERYTEMSPETNIILYLNGYKGLLLGEKVLVTPAMRLQAHVLHTVGGSCIGNSRVKMANVADCVKRGLVKEGQDPRQVAADQLIKDGVDVLHTIGGDDTNTAAADLAAYLKAHGYTLRVIGLPKTIDNDIVPVRQSLGAMTAAEQASRFFQNVVAEQTANPRVLLVHEVMGRSCGYLTAQAADYYRAQLAHREFAPELGHTRERYDIHAVYVPEMTIDLKAEAARLRAVMERVGCVNIFLSEGAGINDIVAEMTAKGETVPRDPFGHVKIDLINPGAWFGKQFGGMVGADKVLVQKSGYFSRSAPANAEDLRLIKGMVDLAVDCALRGEAGLIGHDEERNGVLRAIEFERVKGAKAFNIDHPWFTHLLNEIGQPKGAKVSVAHGDE
What is the function of this protein?
Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis.  Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis.  Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
What are the official names of this protein?
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, 6-phosphofructokinase, pyrophosphate dependent, PPi-dependent phosphofructokinase, PPi-PFK, Pyrophosphate-dependent 6-phosphofructose-1-kinase.
What is the protein family that this protein belongs to?
Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Clade 'P' sub-subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HPRK_STAA8
Sequence: MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
What is the function of this protein?
Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS).  HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).  The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc. ) in the growth medium.  Therefore, by controlling the phosphorylation state of HPr, HPrK/P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport: it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion.
What are the official names of this protein?
HPr kinase/phosphorylase, HPrK/P, HPr(Ser) kinase/phosphorylase.
What is the protein family that this protein belongs to?
Belongs to the HPrK/P family.
Protein: RL15_METS3
Sequence: MIRSKRKINKLRGSRSNGGGCTKKRRGAGNKGGRGNAGASKQHWTWTAKFDPDHYGKHGFKRPQKMIKKVNPVNLSYLEEQADNLIESGKASKDGDSIVIDVTELGYDKVLAKGKITKSFIISAPQFSASAIEKIEEMGGEAIEL
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L15.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL15 family.
Protein: RL21_THESQ
Sequence: MYAIVETAGRQYRVEEGKILYTERQKDYSPGDEIVFDRVVFVRKDGEVLVGKPYVEGAKVVGKVLEHAKARKVKTVKYRPRKNSKVEKGHRQWYTAIKIEKIEL
What is the function of this protein?
This protein binds to 23S rRNA in the presence of protein L20.
What are the official names of this protein?
50S ribosomal protein L21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL21 family.
Protein: RL22_DESAL
Sequence: MQVKATAKYMRVSPQKVRKVADAVKGKPVEAGLNVLQFMPQKSAAMIAKVIRSAVANAEVGGVDVDDLVIKGVIADQGPTLKRFRARAQGRGARILKRTSHITVVLEQ
What is the function of this protein?
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L22.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: YBEY_LISMH
Sequence: MTVLEIDLLDETKKLPDEDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER
What is the function of this protein?
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
What are the official names of this protein?
Endoribonuclease YbeY.
What is the protein family that this protein belongs to?
Belongs to the endoribonuclease YbeY family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYGA_BACP2
Sequence: MNIQDMILTLQKHWSNEGCVLMQAYDTEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRLYQHHQFQVIIKPSPDNIQELYLESLKALGIDPLKHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECKPVSVEITYGIERLASYIQDKENVFDLEWTDGFTVRDLFLMAEYEHSVYTFETSNTDMLFELFTTYEKEAHSQMDKGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIGRVRQLARKVAKTYYEEREKLGFPMLKEEAASHE
What are the official names of this protein?
Glycine--tRNA ligase alpha subunit, Glycyl-tRNA synthetase alpha subunit, GlyRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PYRG_ECO7I
Sequence: MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
What is the function of this protein?
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.  Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
What are the official names of this protein?
CTP synthase, Cytidine 5'-triphosphate synthase, Cytidine triphosphate synthetase, CTP synthetase, CTPS, UTP--ammonia ligase.
What is the protein family that this protein belongs to?
Belongs to the CTP synthase family.
Protein: LYSE_MYCTU
Sequence: MNSPLVVGFLACFTLIAAIGAQNAFVLRQGIQREHVLPVVALCTVSDIVLIAAGIAGFGALIGAHPRALNVVKFGGAAFLIGYGLLAARRAWRPVALIPSGATPVRLAEVLVTCAAFTFLNPHVYLDTVVLLGALANEHSDQRWLFGLGAVTASAVWFATLGFGAGRLRGLFTNPGSWRILDGLIAVMMVALGISLTVT
What is the function of this protein?
Catalyzes the efflux of L-lysine.
What are the official names of this protein?
Lysine exporter LysE.
What is the protein family that this protein belongs to?
Belongs to the LysE/ArgO transporter (TC 2.A.75) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: SYR_XANP2
Sequence: MNVYAIFADHVREAVAALVAEGIIAKDLDLARVVVEPPRDASHGDLATNAAMVLAKDAGLKPRELAERIAGKLGTVAGVKKVDVAGPGFINIALDGTFWPVVLAAVLTQGLDFGRSALGAGEKVNVEYVSANPTGPMHVGHCRGAVFGDALARLMDFAGFAVTKEYYINDAGAQVDVLARSAFLRYREALGEAIGEIPEGLYPGDYLVPVGQKLAAAHGPALKEKSETDWLPLVRAEAIATMMVAIREDLAALGISFDVFFSERSLSTGAVDRVGAAIEALRASGEVYEGRLPPPKGAPIEDWEDREQTLFRSTDFGDDVDRPLKKSDGSYTYFAGDIAYHKDKVDRGFLKMIDVWGADHGGYVKRMQAAVKAVSGGRATLDVELIQLVRLFRAGEPVRMSKRSGSFVTLREVVDEVGRDAVRFMMLFRKNDAPLDFDLAKVIEQSRENPVFYVQYAHARAKSILRNAAEEFADLPQQAASFATAPLARLDDEGEITLLRRLASWPRLVEQAAGAREPHRISFFLHELASEFHGQWNRGKDLPHLRFIIENDRELTSARLALVHGVATVLASGLKVLGVTAVDEMK
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TIG_STRP2
Sequence: MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGEEALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSMEKGQDWVITAEVVTKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFVGSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGKEAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEETYKDAVEGAAIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQAEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQNLLSADMLKHDITIKKAVELITSTATVK
What is the function of this protein?
Involved in protein export.  Acts as a chaperone by maintaining the newly synthesized protein in an open conformation.  Functions as a peptidyl-prolyl cis-trans isomerase.
What are the official names of this protein?
Trigger factor, TF, PPIase.
What is the protein family that this protein belongs to?
Belongs to the FKBP-type PPIase family. Tig subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm.
Protein: YMGG_SHIFL
Sequence: MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK
What are the official names of this protein?
UPF0757 protein YmgG.
What is the protein family that this protein belongs to?
Belongs to the UPF0757 family.
Protein: TRM3_HHV8P
Sequence: MLLSRHRERLAANLQETAKDAGERWELSAPTFTRHCPKTARMAHPFIGVVHRINSYSSVLETYCTRHHPATPTSANPDVGTPRPSEDNVPAKPRLLESLSTYLQMRCVREDAHVSTADQLVEYQAARKTHDSLHACSVYRELQAFLVNLSSFLNGCYVPGVHWLEPFQQQLVMHTFFFLVSIKAPQKTHQLFGLFKQYFGLFETPNSVLQTFKQKASVFLIPRRHGKTWIVVAIISMLLASVENINIGYVAHQKHVANSVFAEIIKTLCRWFPPKNLNIKKENGTIIYTRPGGRSSSLMCATCFNKNSIRGQTFNLLYVDEANFIKKDALPAILGFMLQKDAKLIFISSVNSSDRSTSFLLNLRNAQEKMLNVVSYVCADHREDFHLQDALVSCPCYRLHIPTYITIDESIKTTTNLFMEGAFDTELMGEGAASSNATLYRVVGDAALTQFDMCRVDTTAQQVQKCLGKQLFVYIDPAYTNNTEASGTGVGAVVTSTQTPTRSLILGMEHFFLRDLTGAAAYEIASCACTMIKAIAVLHPTIERVNAAVEGNSSQDSGVAIATVLNEICPLPIHFLHYTDKSSALQWPIYMLGGEKSSAFETFIYALNSGTLSASQTVVSNTIKISFDPVTYLVEQVRAIKCVPLRDGGQSYSAKQKHMSDDLLVAVVMAHFMATDDRHMYKPISPQ
What is the function of this protein?
Component of the molecular motor that translocates viral genomic DNA in empty capsid during DNA packaging.  Forms a tripartite terminase complex together with TRM1 and TRM2 in the host cytoplasm.  Once the complex reaches the host nucleus, it interacts with the capsid portal vertex.  This portal forms a ring in which genomic DNA is translocated into the capsid.  TRM3 carries an RNase H-like nuclease activity that plays an important role for the cleavage of concatemeric viral DNA into unit length genomes.
What are the official names of this protein?
Tripartite terminase subunit 3, Terminase large subunit.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae TRM3 protein family.
What are the subcellular locations of this protein?
Host nucleus. Note=Responsible for the nuclear localization of the two others subunits TRM1 and TRM2.
Protein: RSMH_FRATT
Sequence: MHYSVLLQESINDLNINPQGIYIDATFGRGGHSKAILNRLTTGRLIAFDKDLDAISYARENFQFSNFEIVHASFASIYDYCLQHSLLGKIDGIIMDLGVSSPQLDNAARGFSFTHNGPLDMRMDVSKGITASQALEELSVDDLSYIFKVYGEERFAKKIALRIKDYIQQNGSIRKTLELAELILATIGKKEKKNPATRCFQALRIYVNNELKDLEALLENILAVIKSGGRIAAISFHSLEDRIVKQKFSALINPKQELNRITKMLPQDSSQIKLKWITKKSKANEDELNQNVRSRSAILRVVEKL
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NFU1_DROSE
Sequence: MSKFLSQAAINTLRNTRLGSRQLVRSFAGISNTRNHREAGHQEWGCGQSAGRGLLELRMPVACRRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQEPSGGGPH
What is the function of this protein?
Molecular scaffold for [Fe-S] cluster assembly of mitochondrial iron-sulfur proteins.
What are the official names of this protein?
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the NifU family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: Y425_AFV2P
Sequence: MTSLQEYMVPIVVDGEVPPEIYVALRGTDKDKVKRMWTNANNPFALAKACSRGSAEIVGKPSSVYLKQYRSATYYVLQYPSGKLLLPVDEVDESVVDDIQNELLYVSVVRKNNLYFVTDIEPLVTKSKVERGEELREVADANGVSPDDLPALGYGYVTTSSSKIFTGTDKMIRNDAVNRLSLLMLLRFFTTAKVGGMPVHAFELTTPNTGKTTFAVRNIYLVNWGYIDEAPSFARLVMDAKTSALGLVFRNDGVFIDEIDKYGSNMRDVIHIMLTGMSHGVWKRAKGDTDAPSIVRRIPVYFAGNKDSSTLGTMSTRNYIKNVLVSMKLYQSLVDALLDRIAITIANEAEINASDYVSGYVIADTYLRGYISYVSSQATKMYKDLGIGNGRERQNINAINALCVATTNFDHCDEFAKSVSSGFLV
What are the official names of this protein?
Uncharacterized protein ORF425.
Protein: RAPA_PHOLL
Sequence: MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNSGDVVTSHEGWQLKVDEIQQENGLLIYTGTRLDTLEENISLREVFLDSKLTFNKPQDRLFAGQIDRMDRFALRFRARKYQSEQFKLAESGLRGIRASLIPHQLHIANEVGKRYAPRVLLADEVGLGKTIEAGMIIHQQLLAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFALFDDSRYIEARHDSDNPFETEQLVLCSLDFARRNKQRFEHMLEASWDLMVVDEAHHLVWSEDAPSREYQVVEQLAEQIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYQTFIDEQQKYRPVADAVTLLLSGEQLNNNQLNLMGELISEQNIEPLLKAANSNSGESETARRELISMLMDRHGTSRILFRNTRNGVKGFPHRELHQIKLPLPSQYQTAIKVSDIMGAKKSLEARAWDMLYPEQIYQEFEGENATWWNFDPRVEWLLGFLMANRHEKVLVICAKATTALQLEQVLREREGIRGAVFHEGLSLIERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQSRDIQISVPYLENTAQAVLIRWYHEGLDAFEHTCPTGRTIYDHYYEALLNYLAKPNNQDQEKFGEFIDQCRQQHEQLKQQLEQGRDRLLEMNSNGGEHGLRLAEKISEYDNDTELVNFSLNLFDIVGINQEDRNDNMIVLTPSDHMLVPDFPGLPKDGCTITFDREQSLSREDAQFISWEHPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKRLQLTRFLPPTPLRILMDLKGNNLADQVEFESFNRQLNAVNRHTASKLVNAVQKEVHAILQQAEGLVETQAKSLIEQAEQEADENLAAELSRLEALKTVNPNIRDDELEAIEANRQQLLLNLNQASWRLDAIRLVVVTHQ
What is the function of this protein?
Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations.  Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA.  Does not activate transcription on linear DNA.  Probably not involved in DNA repair.
What are the official names of this protein?
RNA polymerase-associated protein RapA, ATP-dependent helicase HepA.
What is the protein family that this protein belongs to?
Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
Protein: RL21_CAMJ8
Sequence: MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDKELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
What is the function of this protein?
This protein binds to 23S rRNA in the presence of protein L20.
What are the official names of this protein?
50S ribosomal protein L21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL21 family.
Protein: NUON_ECOLI
Sequence: MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit N, NADH dehydrogenase I subunit N, NDH-1 subunit N, NUO14.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 2 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: TRHO_SYNP6
Sequence: MSLVLINFYRFVALGDCDRWRQWLQDLCTALGLRGTILLAPEGINAGLAGNTEAIAQFLSELQQHPPFANLSFKSATVTDWPFARLKVKVKPEIVSLGCPELNPAERTGTLVAPQDWNQLLQDPEVVLIDVRNRFEIALGSFPRAIDPQTDRFRDFPRFVQEQLLPQPPAKVAMFCTGGIRCEKASAYLLEQGIETVYQLEGGILNYLEAIAPEENHWQGDCFVFDERIAVDRQLQTPQHQLCPACGQPVVATTCSHCQDSVQASSSPK
What is the function of this protein?
Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.
What are the official names of this protein?
tRNA uridine(34) hydroxylase, tRNA hydroxylation protein O.
What is the protein family that this protein belongs to?
Belongs to the TrhO family.