PharMolix/UniProtQA huggingface dataset:
Protein: RSGA_PSEPG
Sequence: MAKRQLNRRQNWRIEKIQGERAARAAKREQHALQELEGGDLGPEQLGLVIAHFGVQVEVEAQDGEGAGQVFRCHLRANLPALVTGDRVVWRAGNQGIGVIVAQMPRSTELCRPNNHGQLKPVAANVDLIVIVFAPAPEPHPNLIDRYLVAAEHAGLRPLLLLNKADLINDENGPGLHALLEVYRELGYPLLEVSAHQGDGMQRLQQQLDGHISVFVGQSGVGKSSLVNSLLPDAGTRVGDLSEWSGQGTHTTTTARLYHFPNGGDLIDSPGIREFGLGHVSRDDVEDGFIEFRDLFGTCRFRDCKHDREPGCALLKALDEGRIKPQRMNSYRSIIASLTEDSY
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Helps release RbfA from mature subunits.  May play a role in the assembly of ribosomal proteins into the subunit.  Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.
What are the official names of this protein?
Small ribosomal subunit biogenesis GTPase RsgA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: STRA6_BOVIN
Sequence: MSTQAAGNQTSSGATDSEDSYDSWYIDEPQGGQELQPEGLVPSCQPNVPPSLYHTCLAVLSILVLFLLAMLVRRRQLWPRCGHGRPGLPSPVDFLTGDRPRTVPAAVFMVLFSSLCLLLPTEDPLPFLSLASPPGRDGEAETSRGPWKILALLYYPALYYPLAACATVRHGAAHLLGSLLSWAHLGVQVWQRAECPESPKIYKYYSLLASLPLLLGLGFLSLWYPVQLVRSFGHGAATGSKGLQSSYSEEYLRTLLCQKKLKSSSHTCKRGFASQAWMYFRHSVYIPQRGFRLPLKLVLSVTLTGTAIYQVALLLLVGVVPTIQKVRAGITTDVSYLLAGFGIVLSEDRQEVVELVKHHLWALEVCYISALVLSCLLTFLMLVHSLVTHRTNLRALHRGGALDIGPLTQSPRPSRQAIFCWMSFTAYQTAFTCLGLLVQQILFFLGTLTLAFLVFMPMLHGRNLLLLHYLKSSWPFWLTLALAVTLQNAAAHWAFLDTHHGRPGLTNRRALYAATFLLFPVNVLVGTMVAAWRVLLSALYNAVHLGRMDLSLLPLRAATLDPGYHTYCNFLRMEASQSHPAATAFCALLLRTQRPKPRATPQDGLRLGEEEEGIQLLQTKDLVAKGAGPRARQGRARWGLAYTLLHNPALQAFRKTALPGARPNGAQP
What is the function of this protein?
Functions as retinol transporter.  Accepts all-trans retinol from the extracellular retinol-binding protein RBP4, facilitates retinol transport across the cell membrane, and then transfers retinol to the cytoplasmic retinol-binding protein RBP1 (PubMed:17255476, PubMed:18419130).  Retinol uptake is enhanced by LRAT, an enzyme that converts retinol to all-trans retinyl esters, the storage forms of vitamin A.  Contributes to the activation of a signaling cascade that depends on retinol transport and LRAT-dependent generation of retinol metabolites that then trigger activation of JAK2 and its target STAT5, and ultimately increase the expression of SOCS3 and inhibit cellular responses to insulin.  Important for the homeostasis of vitamin A and its derivatives, such as retinoic acid.  STRA6-mediated transport is particularly important in the eye, and under conditions of dietary vitamin A deficiency.  Does not transport retinoic acid (By similarity).
What are the official names of this protein?
Receptor for retinol uptake STRA6, Retinol-binding protein receptor STRA6, Stimulated by retinoic acid gene 6 protein homolog.
Protein: DER_SHEPW
Sequence: MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGIDGTEEGIETRMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLAPYAEAMGITKDGEGEESEEEREYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIPMEREGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLGFALNAGRALVIAVNKWDGIDQEVKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLYESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVVHGNQVKKLPDSYKRFMMNYYRRSLKVIGTPIQIRFQDGGNPFEGMNTKKLTVSQERRRKRMVGHIRDKNKD
What is the function of this protein?
GTPase that plays an essential role in the late steps of ribosome biogenesis.
What are the official names of this protein?
GTPase Der, GTP-binding protein EngA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
Protein: RPOZ_VIBPA
Sequence: MARVTVQDAVEKVGNRFDLVLIAARRARQMQTGGKDALVPEENDKPTVIALREIEEGLITKEVLDARERQEQQEQEAAELAAVSSIAHNR
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: YFJD_ECOLI
Sequence: MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
What are the official names of this protein?
UPF0053 inner membrane protein YfjD.
What is the protein family that this protein belongs to?
Belongs to the UPF0053 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RS6_PORGI
Sequence: MNNYETVFILTPVLSDAQMKEAVDKFTGLLKQEGAVIVNEENWGLRKLAYPIQKKSTGFYQLVEFQANPDVIAKLETNFRRDERVIRFLTFRQDKFAAEYAAKRRSLKAKTEEVKEA
What is the function of this protein?
Binds together with S18 to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S6.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS6 family.
Protein: CBPM_ECO5E
Sequence: MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
What is the function of this protein?
Interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA.  Together with CbpA, modulates the activity of the DnaK chaperone system.  Does not inhibit the co-chaperone activity of DnaJ.
What are the official names of this protein?
Chaperone modulatory protein CbpM.
What is the protein family that this protein belongs to?
Belongs to the CbpM family.
Protein: DNAJ_CERS5
Sequence: MAKRDYYEVLGVSRGASADELKKAYRTKAKELHPDRNADNPQAEAQFKEVNEAYDVLRDADKKAAYDRYGHAAFEGGMGGGGGARGAYGQQADFASAFSDVFEDLFGDFMGGRGGAARSRAQRGSDLRYNLRVTLDEAYRGVQKTINVPASVACDSCKGTGAEGGAEPVTCPTCSGMGKVRAQQGFFTVERTCPTCNGMGQIVKNPCKSCHGAGRVEKERTLSVNIPAGVETGTRIRLAGEGEAGMRGGPSGDLYIFIEVREHALFQRDGVHLFCRVPVSITAAALGGEVEVPTIDGGSSRVKIPAGSQTGKQMRLRGKGMPALRGGGAGDMLIELAVETPVNLTARQKELLREFEKLSEDNNPEGKSFFSKVKGFWDGMTG
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.  Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
What are the official names of this protein?
Chaperone protein DnaJ.
What is the protein family that this protein belongs to?
Belongs to the DnaJ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL18_RUEPO
Sequence: MANSKRTLFLKRRLRVRNKLRKVNAGRLRLSVHRSNKNISAQLIDDVRGVTLAAASTMEKDLGVVGKNNVEAAKKVGAAIAERAKKAGVEEAYFDRGGFLFHGKVKALADAAREGGLKI
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: COBT_CHLPD
Sequence: MRQKLEELLTAIQSPDRSLAIVAQAHLDDLTKPKGSLGCLEEIALSYVVATGRIKPVLERKKICCFAGDHGVAAEGVSAFPPEVTPQMVYNMLNGGAAINVLARHAGAELSVVDVGVNHDFPDLPGLLRRKVRYGSRNMSLEPAMSENETIHALMVGAELARDAALAGFHLLGTGEMGIANTTPAAALFAVLLDIPVETITGRGTGIDDARLNHKIAVIRKAIKVNEASLSTPLGTLAALGGYEIAAIAGFVLGASVCRVPVVIDGFISTAGAVAAMFLSPAVADYLFFSHLSGEQGHRIVMEKLARKPILDLDLRLGEGTGGALAMRIIEASVNVYNEMQTFSSAGVSGKTEE
What is the function of this protein?
Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
What are the official names of this protein?
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, NN:DBI PRT, N(1)-alpha-phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the CobT family.
Protein: AROC_BURTA
Sequence: MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMALTEADVQLELDRRKPGTSRHVTQRQEPDQVEILSGVFEGVTTGAPIALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGVRDYRGGGRSSARLTAPVVGAGAIAKKWLRERFGVEVRGYMSALGEIEIPFVDWSHVRENPFFAPNADIVPQLEGYMDALRKDGDSIGARIDVVASGVPVGWGEPLFDRLDADIAHAMMGINAVKGVEIGAGFASVAQRGSVHGDELTPDGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSITKAGEPAVIETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVSTATPKIAARAPQAQ
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: SYI_LACJO
Sequence: MRVKDTLNLGKTKFKMRGNLPVREAEWQKEWEENKLYEQRLKLNEGKPRFDLHDGPPFANGNIHMGHSLNKISKDIIVRFKNMNGYYAPYVPGWDTHGLPVEQQLAKKGVDRKTMDRAKYRELCRQFAEEQVQKQMADFKRLGVMADWDHPYITLQPKFEAEEIRVFGEMFKKGYIYKGKKPVYWSWSSESTLAEAEVEYHDIKSPRIYVAFPIKDGKGILDSDTSLVIWTTTPWTIPSNVGITVNPKFDYSVVEVNGKKYVIGSQRLSAVAEDLGWEDYKVVKTLKGTDFDRMTYQHPLYDVTGVIMNDTYVTADDGTGLVHNATGFGEDDYNVGRRYGLPVFSPMDAQGRFTKEVPDPDLVGMFYDDANKVVADKLEKAGALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILAEIEKANFIPAWGKTRLYNMIKDRGDWVISRQRAWGVPLPIFYAEDDTPIVTPETIEHVAQIFEKEGSNAWYTYTAEELLPEGFKSEHSPNGKFRKETDILDVWFDSGSSWAGVMQERDGLGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVIKQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNTMRFMLANTSDFDPKEDAIAYPDMSGVDQYMEIKLNRLIEEAIEAYNKFDFNSVYKKVFSFISNDLSAFYLDFAKDILYIDAEDSETRRSMQTVIYDVLVKLTKLMTPILPHTMEEVWGYLKEPEDYVQLANMPEVDHFANEDEVLADWNAFMKVRSDVLKALEKARNAKVIGKSFEAHVTLYPTEETKALLDKLNANIRQILIVSDLTISDEEAPENAEKLPTASIVVEHAAGEVCPRCRRTTTDVGSDPRFPELCARCAAIVAENFPEAEKEGLEK
What is the function of this protein?
Catalyzes the attachment of isoleucine to tRNA(Ile).  As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities.  One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP.  The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
What are the official names of this protein?
Isoleucine--tRNA ligase, Isoleucyl-tRNA synthetase, IleRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: REDT_TRIIF
Sequence: MSKFWLLLLLVAAFQFAHSYPAAEYELDETTNDEVRQFIGDGYFEDEGDDGDEERFKIKPGKVLDKFGKIVGKVLKQLKKVSAVAKVAMKKGAALLKKMGVKISPLKCEEKTCKSCVIFKIPTENSFCLTIRFMKTNIATYLVVAGEINRKSKFEEKLKLGNMPRCVNVEGFIGKVCMKGIEGHAKSSSGQANVNFCLGLVAEKFGVGAKLCGIYANKKVRVKISPQLFPGATSLDGDIVKLDDNGEDATTLDVDEVEID
What is the function of this protein?
Pore-forming protein that induces lysis of T. cruzi trypomastigotes, bacteria E. coli and human red blood cells (PubMed:11751887).  The parasite lysis is much more important than the hemolysis, probably due to difference in membrane composition (PubMed:11751887).  Its action on protozoan parasites and bacteria may indicate a role in the control of microorganism growth in the salivary glands (PubMed:11751887).
What are the official names of this protein?
Trialysin, Triatoma infestans cytolysin.
What is the protein family that this protein belongs to?
Belongs to the redulysin-like family.
What are the subcellular locations of this protein?
Secreted. Target cell membrane.
Protein: PTCA_HUMAN
Sequence: MALPCTLGLGMLLALPGALGSGGSAEDSVGSSSVTVVLLLLLLLLLATGLALAWRRLSRDSGGYYHPARLGAALWGRTRRLLWASPPGRWLQARAELGSTDNDLERQEDEQDTDYDHVADGGLQADPGEGEQQCGEASSPEQVPVRAEEARDSDTEGDLVLGSPGPASAGGSAEALLSDLHAFAGSAAWDDSARAAGGQGLHVTAL
What are the official names of this protein?
Protein tyrosine phosphatase receptor type C-associated protein, PTPRC-associated protein, CD45-associated protein, CD45-AP, Lymphocyte phosphatase-associated phosphoprotein.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.
Protein: DEF12_ARATH
Sequence: MAKPCAAFLVFLCLSMLILSIPDISCQMNDCDCDHDHRCGEWEDESHGNCKQHHLRVVCTCTLDCLDISSTSNA
What are the official names of this protein?
Putative defensin-like protein 12.
What is the protein family that this protein belongs to?
Belongs to the DEFL family.
What are the subcellular locations of this protein?
Secreted.
Protein: GAT1B_XENLA
Sequence: MDYTTLTTQDPLQNYTESALASTSEDSEFLYGLGGENSPGHYGGIVSSRAVGGFRHSPVLQTFPLHWPETSAGIPQSLTTYGRSPGTLPLYPSAASALGSITSPPLYSATPFLLGSAPLAERDGSPKFLETLKTERTSPLTSDILSLEPRSPSLLQVGYLGGGGQEFSHSLFQSTEDRECVNCGATVTPLWRRDLSGHYLCNACGLYHKMNGQNRPLIRPKKRLIISKRAGTQCSNCHTSTTTLWRRNAGGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKVSSKSKKKKQLENPFEPPKTGVEEPSPYQYGPLLFHGQMPTMGHMLSPPHHFLQSPRMSHSTPAVSYRYSASGVTPPELA
What is the function of this protein?
Transcription factor that acts synergistically with tal1/scl and lmo2 to specify embryonic dorsal mesoderm to a hematopoietic fate.
What are the official names of this protein?
GATA-binding factor 1-B, Transcription factor xGATA-1B.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL4_TREPS
Sequence: MEKTVYSVEGVALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTVIEDFTVESGKTRDLIQVLRHFAQRERTVFILQNDDALLKRAGRNIPTLSFLSYNRLRAHDLFYGRKVLVLETAVHKIADFYRSKDAAQDGTY
What is the function of this protein?
Forms part of the polypeptide exit tunnel.
What are the official names of this protein?
50S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
Protein: MTLD_AERS4
Sequence: MKTLHFGAGNIGRGFIGKLLADASHQVTFADVNETLIDQLNHRQEYKVHVVGADQKLDVVRNVAAVSSAGHEVIARIITADLVTTAVGPNILDKIASTLAKGLQARFDAGNLSPLNVIACENMVRGTSHLKQEVLKYLPVAYHATHESCVGFVDSAVDRIVPPAAANDDPLEVTVESFSEWIVDQTQFKGELPQVAGMEPTDNLMAFVERKLFTLNTGHIVTAYLGKLRGYRTIREAIEDPVIRSKVRRAMEESGAVLVKRYGFDPRLHAAYIEKILARFANPYLVDEIDRVGRQPLRKLAAGDRLVKPLLGTLEYGLPSDHLQEGIAAALHYCNADDPQAVELQALLAELGPAQALARVTGLAADSDIVSAIVARYDSLK
What are the official names of this protein?
Mannitol-1-phosphate 5-dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the mannitol dehydrogenase family.
Protein: CYB_BOSJA
Sequence: MTNIRKSHPLMKIVNNAFIDLPAPPNISSWWNFGSLLGVCLILQILTGLFLAMHYTPDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWILMADLLTLTWIGGQPVEHPYITIGQLASIMYFLLILVLMPTAGTVENKLLKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: CARB_SULIY
Sequence: MKETPKKVLVIGSGPIKIAEAAEFDYSGSQALKALKEEGIETVLVNSNVATVQTSKKFADKLYMLPVVWWAVEKVIEKERPDGIMIGFGGQTALNVGVDLHKKGVLQKYGVKVLGTQIDGIEKALSREKFRETMIENNLPVPPSLSARSEEEAIKNAKIVGYPVMVRVSFNLGGRGSMVAWTEEDLKKNIRRALSQSYIGEVLIEKYLYHWIELEYEVMRDKKGNSSVIACIENLDPMGVHTGESTVVAPCQTLDNLEYQNMRTYTIEVARSINLIGECNVQFALNPRGYEYYIIETNPRMSRSSALASKATGYPLAYVSAKLALGYELHEVINKVSGRTCACFEPSLDYIVTKIPRWDLSKFENVDQSLATEMMSVGEVMSIGRSFEESLQKAVRMLDIGEPGVVGGKIYEAKMSKVEALKYLKERRPYWFLYVAKAFKEGATIDEVYEVTGISKFFLNKIKGLVDFYETLKILKEIDEETLKLAKKLGFSDEQISKALNKSTQYVRKIRDQSNIIPVVKLIDTLAGEWPSVTNYMYLTYNGTEDDLEFSQGNKLLIVGAGGFRIGVSVEFDWSVVSLMEAASKYFDEVAVLNYNPETVSTDWDIARKLYFDEINVERVLDLIKKEKFRYVATFSGGQIGNSIAKELEENGVRLLGTSGSSVDIAENREKFSKLLDKLGISQPNWVSATSLEEIKKFVNEVGFPVLVRPSYVLSGSSMKIAYSEEELYEYVRRATEISPKYPVVISKYIENAIEAEVDGVSDGNRVLGITLEHVEEAGVHSGDATMSIPFRKLSENSVNKMRENVLSLARELNIKGPFNVQFVVKDNTPHIIELNLRASRSMPFSSKAKGINLINEAMKAIFNGLDFSEDYYEPPSKYWAVKSPQFSWSQLRGTYPFLGPEMKSTGEAASFGVTFYDALLKSWLSSIPNRIPNKNGIALVYGDKNLDYLKDTAVNLVKFGLTVYSISELPLQGIETIDKTKAEELVRAKKVEIVVTDGYLKKFDYNIRRTAVDYNIPVILNGRLGYEVSKAFLDYDSLTFFEISEYGGGI
What are the official names of this protein?
Carbamoyl-phosphate synthase large chain, Carbamoyl-phosphate synthetase ammonia chain.
What is the protein family that this protein belongs to?
Belongs to the CarB family.
Protein: LUXP_VIBPA
Sequence: MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISDYWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNITTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKATKQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMAEAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
What is the function of this protein?
Binds to the signaling molecule autoinducer 2 (AI-2), a furanosyl borate diester, (3a-methyl-5,6-dihydrofuro-[2,3d][1,3,2]dioxaborole-2,2,6,6a-tetraol).  This complex then interacts with the LuxQ sensor protein (By similarity).
What are the official names of this protein?
Autoinducer 2-binding periplasmic protein LuxP.
What is the protein family that this protein belongs to?
Belongs to the bacterial solute-binding protein 2 family.
What are the subcellular locations of this protein?
Periplasm.
Protein: PYRB_OLEA2
Sequence: MQDQERFIWPHKDLLDVTQLSREQIRHLLDLAGQFHEINQRPVKKVPTLKGKTVVLFFAEPSTRTKTSFDMAGKRLSADTFSLAKSGSSLVKGESLKDTALTLQAMSPDVIVIRHTSSGAAQFLAERLECAVVNAGDGWHAHPTQALLDAFSLNRAWNGQFEGKTLLILGDIAHSRVARSNVHLLTRMGARVRLCAPRTLLPAGADTWPVEIFDNLNKAVQGVDAVMALRLQLERQQAGLLPDLREYASRYCLNLNHMQHAAPGARVLHPGPMNRGVEISSALADAGQSLVLDQVASGVATRMAILFLHATRKDTGDR
What are the official names of this protein?
Aspartate carbamoyltransferase, Aspartate transcarbamylase, ATCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
Protein: BARD1_CAEEL
Sequence: MFENTKKALETFRTAIECVKCKKPRGDLQYLGSSCKHAYCWECIATFQQKPSGKRSSVARHMCPSCAFPLDTSKITEAHMLKTCFDTLSELNDLLQKVGTTSLTQAEFACTQNIFNKEKTPADAVEKFLETQAHMPDEMGQLGEEDDDLMCKDENRENSNSPELDIFHDYSKEASPTRNSTKRPSTVSVHERKPKRSSILKTSVKNEPAAPVVDLFASQVPQRTHQNDLLTPFIERRSTAPAATGVATYAQAFGSSSNPVKAEIIEEDIFSKAIPLTKRQASMSASAKKQPKLEPEEPEEVPSTSRSRKNSIKSDKIERRSQSPMSFGEKSMSVKSEQRRSSYGTRRGEAVLVNSIRNNRIPQLRSAVEAGTCVNEKEDGKTPLYVAVENSSLEAVKILVEAGAVINASCGSTLETTLHEAVRRQNTQIVEYLLSKGASIKIRNIAGKTVEEMAKSDPKIRKIIEKFKTEQRVLQPVVAPPKSRLHFVQLIDEKMLTESEKRKLPGKINIVPADMDSPTHVVVTVDLKTRVLNINKEHIGEILKAIIKSGMIVSRDWLRACIIDPSKVDDDRSYMVQKVRWMEGEVFENTIEQWKKTITKMQPKLFAGCKFFIPKPKYNFLDRPALFEIIRSAGGQAAAREPIIDEKDPPPYHNANLKPNFVLYSLTHDIGDKFRDCTKYNLVSEQWLIEAILGCSITTPPH
What is the function of this protein?
Constituent of the CeBCD complex that possesses E3 ubiquitin-protein ligase activity (PubMed:16628214).  When bound to chromatin, the brc-1-brd-1 heterodimer within the CeBCD complex is inactive during normal conditions, but in response to DNA damage, the brc-1-brd-1 heterodimer associates with other proteins such as the recombinase rad-51 or the E2-ubiquitin-conjugating enzyme let-70, which activate the CeBCD complex as an E3-ubiquitin ligase (PubMed:16628214).  Moreover, association between the brc-1-brd-1 heterodimer and rad-51 and let-70, probably requires DNA checkpoint proteins such as atl-1 and mre-11 in order to induce ubiquitination at DNA damage sites (PubMed:16628214).  To this end, the brc-1-brd-1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability (PubMed:14711411, PubMed:30383754).  Plays a role in triggering cellular responses at damage sites in response to DNA damage that may be induced by ionizing radiation for example (PubMed:14711411, PubMed:30383754).  In particular, protects against chromosome non-disjunction and nuclear fragmentation during meiotic double-strand break repair to ensure sister chromatid recombination and aid chromosome stability (PubMed:14711411).
What are the official names of this protein?
BRCA1-associated RING domain protein 1, BARD1, Ce-BRD-1, Cebrd-1, RING-type E3 ubiquitin transferase BARD1.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Chromosome. Note=Co- localizes with brc-1 in germline nuclei at meiotic prophase I (PubMed:30383754). At the transition between mid- and late- pachytene, localization together with brc-1 is less diffuse and becomes a linear pattern along the chromosomes (PubMed:30383754). In late pachytene nuclei, co-localizes with brc-1 at crossover sites and the short arm of homologous chromosomes (PubMed:30383754).
Protein: ATPB_CAPBU
Sequence: MRINPTTSDPEVSIREKKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGKPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMESKLKK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, chloroplastic, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein.
Protein: Y816_SYNY3
Sequence: MTKSPNLTVAVIGTGFGQAVHIPALQYHQQTQAIAIYHRDLAKAQEVAKSNDLAYSYNNLEELLANPEVQAVTIASPPFLHYEMAKQAILAGKHVLLEKPMTLRVEETIELYHLARQREVQVIPDFEFRFVPAWQYVAELLGQGILGQLKLIKVDWLVGSRANPNRAWNWYAQREKGGGALGALASHTFDYLHWLFGPAQSLAANLSVAIAERPDPLDNNRLKPVTAEDTALISLTLANDVPCQINITSVAHGGRGHWLEIYGEKGSLVLGSDNLKDYVHGFRIFHHPVGQPMQELTVPTRLDFPKVFADGRLAPVVRVVDEWVQSINQKRTPTPSLRHGVYSQLLMDLTKQAHQEKHWVAVPDLDRLLAQ
What are the official names of this protein?
Uncharacterized oxidoreductase sll0816.
What is the protein family that this protein belongs to?
Belongs to the Gfo/Idh/MocA family.