PharMolix/UniProtQA huggingface dataset:
Protein: KOG1_YEAST
Sequence: MPEIYGPQPLKPLNTVMRHGFEEQYQSDQLLQSLANDFIFYFDDKRHKTNGNPIPEEDKQRDVNRYYQPITDWKIMKDRQKTVSAALLLCLNLGVDPPDVMKTHPCARVEAWVDPLNFQDSKKAIEQIGKNLQAQYETLSLRTRYKQSLDPCVEDVKRFCNSLRRTSKEDRILFHYNGHGVPKPTKSGEIWVFNRGYTQYIPVSLYDLQTWLGAPCIFVYDCNSAENILINFQKFVQKRIKDDEEGNHDVAAPSPTSAYQDCFQLASCTSDELLLMSPELPADLFSCCLTCPIEISIRIFLMQSPLKDSKYKIFFENSTSNQPFGDSKNSFKSKIPNVNIPGMLSDRRTPLGELNWIFTAITDTIAWTSLPRPLFKKLFRHDLMIAALFRNFLLAKRIMPWYNCHPVSDPELPDSITTHPMWKSWDLAMDEVLTKIVIDLKNAPPATALESQMILQQQETLQNGGSSKSNAQDTKAGSIQTQSRFAVANLSTMSLVNNPALQSRKSISLQSSQQQLQQQQQQQQQFTGFFEQNLTAFELWLKYASNVRHPPEQLPIVLQVLLSQVHRIRALVLLSRFLDLGPWAVYLSLSIGIFPYVLKLLQSPAPELKPILVFIWARIMSIDYKNTQSELIKEKGYMYFVTVLVPDWGVNGMSATNGSAMINSGNPLTMTASQNINGPSSRYYERQQGNRTSNLGHNNLPFYHSNDTTDEQKAMAVFVLASFVRNFPLGQKNCFSLELVNKLCFYIDNSEIPLLRQWCVILLGLLFADNPLNRFVCMNTGAVEILLKSLKDPVPEVRTASIFALKHFISGFQDAEVILRLQQEFEEQYQQLHSQLQHLQNQSHLQQQQSQQQQQHLEQQQMKIEKQIRHCQVMQNQLEVIDLRKLKRQEIGNLISILPLINDGSSLVRKELVVYFSHIVSRYSNFFIVVVFNDLLEEIKLLEKSDINTRNTSDKYSVSQGSIFYTVWKSLLILAEDPFLENKELSKQVIDYILLELSAHKELGGPFAVMEKFLLKRSSKAHQTGKFGFNSSQVQFVKSSLRSFSPNERVDNNAFKKEQQQHDPKISHPMRTSLAKLFQSLGFSESNSDSDTQSSNTSMKSHTSKKGPSGLYLLNGNNNIYPTAETPRFRKHTEPLQLPLNSSFLDYSREYFQEPQMKKQEADEPGSVEYNARLWRRNRNETIIQETQGEKKLSIYGNWSKKLISLNNKSQPKLMKFAQFEDQLITADDRSTITVFDWEKGKTLSKFSNGTPFGTKVTDLKLINEDDSALLLTGSSDGVIKIYRDYQDVDTFKIVSAWRGLTDMLLTPRSTGLLTEWLQIRGSLLTTGDVKVIRVWDAHTETVEVDIPAKTSSLITSLTADQLAGNIFVAGFADGSLRVYDRRLDPRDSMIRRWRAGNDKQGVWINNVHLQRGGYRELVSGATNGVVELWDIRSEDPVESFVDQNVTSQYGSQQKPTTMTCMQVHEHAPIIATGTKQIKIWTTSGDLLNSFKNSHNNGVTSTLAATGIPKSLSYSSTSDAFLSSMAFHPHRMMIAATNSHDSIVNIYKCEDERIDYF
What is the function of this protein?
Component of TORC1, which regulates multiple cellular processes to control cell growth in response to environmental signals.  Nutrient limitation and environmental stress signals cause inactivation of TORC1.  Active TORC1 positively controls ribosome biogenesis via control of rRNA, ribosomal protein and tRNA gene expression, and rRNA processing.  TORC1 positively controls protein biosynthesis by regulation of mRNA stability, translation initiation factor activity, and high-affinity amino acid permeases that serve to provide amino acids for use by the translation machinery.  TORC1 also promotes growth by sequestering a number of nutrient and general stress-responsive transcription factors in the cytoplasm.  TORC1 negatively controls macroautophagy, a process to recycle surplus cytoplasmic mass under nutrient starvation conditions.  KOG1 may have a role in binding and recruiting substrates of TORC1.
What are the official names of this protein?
Target of rapamycin complex 1 subunit KOG1, TORC1 subunit KOG1, Kontroller of growth protein 1, Local anesthetic-sensitive protein 24, Regulatory-associated protein of TOR, Raptor.
What is the protein family that this protein belongs to?
Belongs to the WD repeat RAPTOR family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein; Cytoplasmic side. Vacuole membrane; Peripheral membrane protein; Cytoplasmic side. Note=Also localizes to membranous structures within the cell interior, probably endosomal or Golgi membranes.
Protein: HIS4_PSEA8
Sequence: MLIIPAIDLKDGACVRLRQGLMEDATVFSDDPVAMAAKWVDGGCRRLHLVDLNGAFEGKPVNGEVVTAIARRYPDLPIQIGGGIRSLETIEHYVRAGVSYVIIGTKAVKQPEFVGEACRAFPGKVIVGLDAKDGFVATDGWAEVSEVQVIDLARRFEADGVSAIVYTDISKDGMMQGCNVEATAALANATRIPVIASGGIHNLGDIQKLLDARTPGIIGAITGRAIYEGTLDVAEAQALCDNFKA
What are the official names of this protein?
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL23_DECAR
Sequence: MNQERLMQVLLAPQISEKATYVADKYEQVIFRVASDATKPEIKAAVELLFKVEVEGVQVANVKGKVKRFKGATGRRKGWKKAYVSLKPGQEINFVEGGNA
What is the function of this protein?
One of the early assembly proteins it binds 23S rRNA.  One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.  Forms the main docking site for trigger factor binding to the ribosome.
What are the official names of this protein?
50S ribosomal protein L23.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL23 family.
Protein: G6PD_ECO57
Sequence: MAVTQTAQVCDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE
What is the function of this protein?
Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.
What are the official names of this protein?
Glucose-6-phosphate 1-dehydrogenase, G6PD.
What is the protein family that this protein belongs to?
Belongs to the glucose-6-phosphate dehydrogenase family.
Protein: AMPP2_AJECH
Sequence: MAIYSQVPWTLPRYKFEVKVHPLAATSNLQPDDGYKIELRAENTVDKYPAKQHARRVAAQIRQGLGLIFLMGQKSTLHEDSDQERSLRQRRYFFYLSGVDEADCDLTYDIKTDKLTLYVPDFDLRRAIWMGPTLERKAALRKFDVDEVNYHSALDEDVKKWAKNQDTGSTIYLLHGSQGPAENPPNVTIDSKALKLAMDACRVIKDEHEIQLIRRANDISAAAHLEILRGIKSMSNESHIEGSFLNTSVSLGAHKQAYQIIAASGSNAATLHYSKNNEPLKGRQFVCLDAGAEWNCYASDVTRTFPITHQWPSIEAKQIYQLVQEMQESCIALVKEGVRYLDLHFLAHSILIKGFLTLGIFKGGTLDEVKKSGASLLFFPHGLGHHIGLEVHDVSPQSIMAQGINDDSNNILILPTCVSPCTTSSPALISGMVITIEPGIYFSQLALDNAKPEQLKYIDMARVKNYMAVGGVRIEDDILVTKTGYENLTKVPKGDDMLEIIRQGKKGNDSPCVDRPTW
What is the function of this protein?
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides.
What are the official names of this protein?
Probable Xaa-Pro aminopeptidase HCDG_07916, Aminoacylproline aminopeptidase, Prolidase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M24B family.
Protein: RL6_BURP0
Sequence: MSRVGKSPIALQGAEVKLADGAITVKGPLGTITQAVNPLVNVANNDGTLNLSPVDDSREANALSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGIKAETPTQTEIVIKGIDKQKVGQVAAEVRGYRPPEPYKGKGVRYADEVVILKETKKK
What is the function of this protein?
This protein binds to the 23S rRNA, and is important in its secondary structure.  It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
What are the official names of this protein?
50S ribosomal protein L6.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL6 family.
Protein: VAPA_MOUSE
Sequence: MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL
What is the function of this protein?
Binds to OSBPL3, which mediates recruitment of VAPA to plasma membrane sites.  The ORP3-VAPA complex stimulates RRAS signaling which in turn attenuates integrin beta-1 (ITGB1) activation at the cell surface.  With OSBPL3, may regulate ER morphology.  May play a role in vesicle trafficking.
What are the official names of this protein?
Vesicle-associated membrane protein-associated protein A, VAMP-A, VAMP-associated protein A, VAP-A, 33 kDa VAMP-associated protein, VAP-33.
What is the protein family that this protein belongs to?
Belongs to the VAMP-associated protein (VAP) (TC 9.B.17) family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Single-pass type IV membrane protein. Cell membrane; Single-pass type IV membrane protein. Cell junction, tight junction. Nucleus membrane. Note=Present in the plasma membrane and in intracellular vesicles, together with SNARE proteins. May also associate with the cytoskeleton. Colocalizes with OCLN at the tight junction in polarized epithelial cells.
Protein: RL15_CUPTR
Sequence: MQLNNLKPAAGSKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLYRRLPKRGFTSLTKAFTAEVTLRDIERLEAAEVDLLVLKQAGLVGDLVKSAKVIKAGELTRKVTIKGLGATAGAKAAIEAAGGQIAA
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L15.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL15 family.
Protein: RS12_FRASN
Sequence: MPTIQQLVRKGRQDKVEKTKTPALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVRLNSGIEVTAYIPGVGHNLQEHSIVLVRGGRVKDLPGVRYKIVRGALDTQGVRNRKQARSRYGAKKEKG
What is the function of this protein?
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone.  Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together.  The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.
Protein: IFNE_PIG
Sequence: MINKSFFEIMLVLLASSTGFSRELKLVLSQQRRVNRESLKLLNKLQTSSIQQCLPHRKNFLLPQKSMNPHQYQKQQALAILHEMLQQIFSLFRAVISLDGWEESHMEEFLVELHQQLEYLEALMRLQAEQKSDTLCSENLTLQVKMYFQRIRDYLENQDYSSCAWTIVRVEINRCLFFVFQLTGKLSKQGMEP
What is the function of this protein?
Type I interferon required for maintaining basal levels of IFN-regulated genes, including 2'-5'-oligoadenylate synthetase, IRF7 and ISG15, in the female reproductive tract.  Directly mediates protection against viral and bacterial genital infections (By similarity).
What are the official names of this protein?
Interferon epsilon, IFN-epsilon, Interferon epsilon-1.
What is the protein family that this protein belongs to?
Belongs to the alpha/beta interferon family.
What are the subcellular locations of this protein?
Secreted.
Protein: S61A2_DANRE
Sequence: MAIKFLEVIKPFCAVLPEIQKPERRIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAVVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYLSPPESFGTVLEDPIHAIIYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSVGALLF
What is the function of this protein?
Component of SEC61 channel-forming translocon complex that mediates transport of signal peptide-containing precursor polypeptides across the endoplasmic reticulum (ER).  Forms a ribosome receptor and a gated pore in the ER membrane, both functions required for cotranslational translocation of nascent polypeptides.
What are the official names of this protein?
Protein transport protein Sec61 subunit alpha-like 2.
What is the protein family that this protein belongs to?
Belongs to the SecY/SEC61-alpha family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein.
Protein: SYDND_DESAH
Sequence: MTDLLGDMRRTHTCGELRVTDVDTEVTLMGWVQRRRDHGGVIFIDFRDKEGITQIVFNPEVNPEVHAKAQTIRSEYVLGVKGRVVNRPDDMVNPKMVTGGIEILVDELKILSRAETPAFQIEDRIEASETVRLKYRHLDLRRPKLQQNIIARHTASRAVRDYLNDLGFLDIETPFLTRSTPEGARDYLVPSRVNHGQFYALPQSPQLFKQMLMISGFDRYYQIVRCFRDEDLRADRQPEFTQIDMEMSFVGEDEIMEITEGLIKTVFKRVRDIDLELPFQRITYAESIDRFGIDRPDMRFGLELNDLSDLVENTGFKVFASVVKKGGLVKAINAKGCANFTRKQIDELTDFAAIYKAKGLAWVKVKADGTWQSPIAKFFTDDEKKAIEVRLDMEKDDIVFFVADNPKITNEALGQLRNELARRLELIDNNTYRFVWVTHFPLVEYDEGEKRYQAIHHPFTAPLEEDLEKLDTDPLNVRSRAYDMVLNGIEIGGGSIRIHSTELQEKVLNTLGIGKEEANDKFGFLLNALGSGTPPHGGLAFGFDRLVMLLCQEESIRDVIAFPKTQRATCLLTEAPSKAAPAQLQELSIRVVNIEE
What is the function of this protein?
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn).  Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
What are the official names of this protein?
Aspartate--tRNA(Asp/Asn) ligase, Aspartyl-tRNA synthetase, AspRS, Non-discriminating aspartyl-tRNA synthetase, ND-AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TADA1_PONAB
Sequence: MATFVSELEAAKKNLSEALGDNVKQYWANLKLWFKQKISKEEFDLEAHRLLTQDNVHSHNDFLLAILTRCQILVSTPDGAGSLPWPGGSAAKPGKPKGKKKLSSVRQKFDHRFQPQNPLSGAQQFVAKDPQDDDDLKLCSHTMMLPTRGQLEGRMIVTAYEHGLDNVTEEAVSAVVYAVENHLKDILTSVVSRRKAYRLRDGHFKYAFGSNVTPQPYLKNSVVAYNNLIESPPAFTAPCAGQNPASHPPPDDAEQQAALLLACSGDTLPASLPPVNMYDLFEALQVHREVIPTHTVYALNIERIITKLWHPNHEELQQDKVHRQRLAAKEGLLLC
What is the function of this protein?
Probably involved in transcriptional regulation.
What are the official names of this protein?
Transcriptional adapter 1, Transcriptional adapter 1-like protein.
What is the protein family that this protein belongs to?
Belongs to the TADA1 family.
Protein: PARB_RICFE
Sequence: MAKNKGLGRGLSSLLGEEVISIESEIIQIINIDKIRPNENQPRKNFEYDKIKELADSILNNGLLQPIIVDNNFQIIAGERRWRACKLAKVLEIPVIIKNLDARESMEIALIENIQRTDLTVMEEARGFKYLVENFNYTTEKLAERLGKSRSHIANLLRLNNLPQSIQDKVNENILSMGQARCLINHEHAEVMADHIISNDLNVRQTEELVRQWYKNEYTKSPNNNNKVGKRFLKDNATDNDLESLVKVLSEKFGIKVTIENYSLGGKLIFHYKNLEELDLILLKLN
What is the function of this protein?
Involved in chromosome partition.  Localize to both poles of the predivisional cell following completion of DNA replication.  Binds to the DNA origin of replication (By similarity).
What are the official names of this protein?
Probable chromosome-partitioning protein ParB.
What is the protein family that this protein belongs to?
Belongs to the ParB family.
Protein: STDH_YEAST
Sequence: MSIVYNKTPLLRQFFPGKASAQFFLKYECLQPSGSFKSRGIGNLIMKSAIRIQKDGKRSPQVFASSGGNAGFAAATACQRLSLPCTVVVPTATKKRMVDKIRNTGAQVIVSGAYWKEADTFLKTNVMNKIDSQVIEPIYVHPFDNPDIWEGHSSMIDEIVQDLKSQHISVNKVKGIVCSVGGGGLYNGIIQGLERYGLADRIPIVGVETNGCHVFNTSLKIGQPVQFKKITSIATSLGTAVISNQTFEYARKYNTRSVVIEDKDVIETCLKYTHQFNMVIEPACGAALHLGYNTKILENALGSKLAADDIVIIIACGGSSNTIKDLEEALDSMRKKDTPVIEVADNFIFPEKNIVNLKSA
What are the official names of this protein?
Catabolic L-serine/threonine dehydratase.
What is the protein family that this protein belongs to?
Belongs to the serine/threonine dehydratase family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: RSGA_CLOP1
Sequence: MEGIIIKGIGGFYYIKTDEGIIECKARGKFRYNSLKPMVGDRVTIKVENGKGVIEDIHERSSELIRPTVANVTQAFVVFAIKNPDINLDLLNRFLTLCEYNDIHAVVCLNKEDLCTEEEKENLKELINDIGYEVLFINAKEGKGFDALKERLEHNITVLCGPSGAGKSTLLNSFIDREHMETGSVSEKIGRGKHTTRHSELIDVDNGYLVDTPGFTTLDVTFIDRDSLKYCFPEFNDYNNLCKFNGCNHYKEPKCAVKEAVEEGKINKLRYDFYIKTLEEIINRRGN
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Helps release RbfA from mature subunits.  May play a role in the assembly of ribosomal proteins into the subunit.  Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.
What are the official names of this protein?
Small ribosomal subunit biogenesis GTPase RsgA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RHLC_GORGO
Sequence: MSSKYPRSVRCCLPLCALTLEAALILLFYFFTHYDASLEDQKGLVASYQVGQDLTVMAAIGFGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSALSVLISAGAVLGYVNLVQLVVMVLVEVTALGTMRMVISNIFNTDYHMNMTHFYVFAAYFGVTVAWCLPKPLPDIKEDKDQIATIPSLSAMLGTLFLWMFWPSFNSALLRSPIERKNAVFNTYYALAVSVVTAISVSSLAHPQGKINMTYMHNAVLAGGVAVGTSCHLITSPWLAMVLGLVAGLISIGGAKCLPGCCNRVLGIHDSSVMHYNFSLLGLLGEITYIVLMVLHTVGAGNGMVGFQVLVSTGELSLALAIAVTSGLLTGLLLNLKIWKAPHAAKYFDDQVFWKFPHLAVGF
What is the function of this protein?
May be part of an oligomeric complex which is likely to have a transport or channel function in the erythrocyte membrane.
What are the official names of this protein?
RH-like protein IC, Rhesus-like protein IC.
What is the protein family that this protein belongs to?
Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: RNC_ECOK1
Sequence: MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
What is the function of this protein?
Digests double-stranded RNA.  Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S).  Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon.  Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
What are the official names of this protein?
Ribonuclease 3, Ribonuclease III, RNase III.
What is the protein family that this protein belongs to?
Belongs to the ribonuclease III family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RIMP_SYNE7
Sequence: MAHPLIPAILDLARPIADDLDLEVVQAVFHTNQSPPILRLDIRSRVGDTGLEDCERMSRSFELALDEANIIPDAYVLEISSPGLSDTLESDRDFLSFKGFPVQVTSRSPNDDTVEQQGTLLGRDADSVYLNKRGRTVRIARSQVLEVKLIEQL
What is the function of this protein?
Required for maturation of 30S ribosomal subunits.
What are the official names of this protein?
Ribosome maturation factor RimP.
What is the protein family that this protein belongs to?
Belongs to the RimP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ALR_AQUPY
Sequence: MRRAVLEILEERIIHNVKEIHRFSGKRIIAVVKANAYGIGVREVSRILEGLEEVDAFAVACTQEGVELRECGIKKKILILGGILEEDVKLLEEYDLTPVISDPEHLKVLKDRNIKFHVKYDTGMGRLGFTNEIIKDPRVEGVMSHFSSPADRNFSKLQIKRFEEILKNYEKVKYIHLESSAGLIYRVPFTTHVRVGLAIYGEKPLKDYPLEVKPALRLRARLISVKELPENYPVSYGRTYITKRKTKLGVVAFGYADGLMKTLSNRSFLIFEGRKVPIIGNITMDMTMVDLSGTEARTGDWVYIVNEERSFTPLARDAGTIPYEIMCNLSRRVERLVIKKR
What is the function of this protein?
Catalyzes the interconversion of L-alanine and D-alanine.
What are the official names of this protein?
Alanine racemase.
What is the protein family that this protein belongs to?
Belongs to the alanine racemase family.
Protein: PDGFB_SHEEP
Sequence: MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLLHGDSLDEDGAELDLNLTRSHSGGELESLSRGRRSLGSPTVAEPAVIAECKTRTEVSEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQDRKVQVKKIEIVRKKKIFKKATVTLVDHLACRCETVMARAVTRTPGSSQEQRAARTPQTRVTIRTVRVRRPPKGKHRKFKHTHDKTALKETLGA
What is the function of this protein?
Growth factor that plays an essential role in the regulation of embryonic development, cell proliferation, cell migration, survival and chemotaxis.  Potent mitogen for cells of mesenchymal origin.  Required for normal proliferation and recruitment of pericytes and vascular smooth muscle cells in the central nervous system, skin, lung, heart and placenta.  Required for normal blood vessel development, and for normal development of kidney glomeruli.  Plays an important role in wound healing.  Signaling is modulated by the formation of heterodimers with PDGFA (By similarity).
What are the official names of this protein?
Platelet-derived growth factor subunit B, PDGF subunit B, PDGF-2, Platelet-derived growth factor B chain, Platelet-derived growth factor beta polypeptide.
What is the protein family that this protein belongs to?
Belongs to the PDGF/VEGF growth factor family.
What are the subcellular locations of this protein?
Secreted. Note=Released by platelets upon wounding.
Protein: YGCE_ECOLI
Sequence: MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
What are the official names of this protein?
Uncharacterized sugar kinase YgcE.
What is the protein family that this protein belongs to?
Belongs to the FGGY kinase family.
Protein: CAPSD_TMVDA
Sequence: MSYSITSPSQFVFLSSVWADPIELLNVCTSSLGNQFQTQQARTTVQQQFSEVWKPFPQSTVRFPGDVYKVYRYNAVLDPLITALLGTFDTRNRIIEVENQQSPTTAETLDATRRVDDATVAIRSAINNLVNELVRGTGLYNQNTFESMSGLVWTSAPAS
What is the function of this protein?
Capsid protein self-assembles to form rod-shaped virions about 18 nm in diameter with a central canal enclosing the viral genomic RNA.
What are the official names of this protein?
Capsid protein, Coat protein.
What is the protein family that this protein belongs to?
Belongs to the virgaviridae capsid protein family.
What are the subcellular locations of this protein?
Virion.
Protein: CCME_ACICJ
Sequence: MMSRKKRRLWIVIACGIGLSTAVALMLFAFRSSLSFFMSPEQVAARHPPPGRVFRLGGIVQANTVVMGTRNGAPYTTFRITDGRASIPVVYTGVLPGLFRQGQGVVTIGAMAKGDSEFMASTVLAKHGADYMPRDVEMALRKAGKWNPKFGPPPNAGAWDDKSPAQIEASNNG
What is the function of this protein?
Heme chaperone required for the biogenesis of c-type cytochromes.  Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
What are the official names of this protein?
Cytochrome c-type biogenesis protein CcmE, Cytochrome c maturation protein E, Heme chaperone CcmE.
What is the protein family that this protein belongs to?
Belongs to the CcmE/CycJ family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass type II membrane protein; Periplasmic side.
Protein: DEOC2_MESFL
Sequence: MKLNNYIDATLLKPDATLIEINKFVDLCIIKNVRCICVHISRIAVVKEIIKNTKISISGTVSFPFGNATTKLKINEIKECLKLGANEIDFVANIGNIKDHDWEKVNSEFQKIRNSFKDIIIKVIFETCLLTEEEIIKCCQIAVKNKLDFVKTSTGYSKMGATIEHVKLMKKIVNNECKVKASGGIKTKNFALELVEAGAERIGTSSISEVLN
What is the function of this protein?
Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.
What are the official names of this protein?
Deoxyribose-phosphate aldolase 2, DERA 2, 2-deoxy-D-ribose 5-phosphate aldolase 2, Phosphodeoxyriboaldolase 2, Deoxyriboaldolase 2.
What is the protein family that this protein belongs to?
Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GUAC_KLEP3
Sequence: MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELEREFTFKHSGQTWSGVPIIAANMDTVGTFSMAKALATFGILTAVHKHYTVEEWQAFVQGASADVLKHVMVSTGTSDADFEKTQQILSQNPQLKFVCIDVANGYSEHFVQFVAKAREAWPQKTIIAGNVVTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIISDGGCTMPGDVAKAFGGGADFVMLGGMLAGHEESGGTIVEENGEKFMLFYGMSSESAMTRHVGGVAKYRAAEGKTVKLPLRGPVDNTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNSL
What is the function of this protein?
Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP.  It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
What are the official names of this protein?
GMP reductase, Guanosine 5'-monophosphate oxidoreductase, Guanosine monophosphate reductase.
What is the protein family that this protein belongs to?
Belongs to the IMPDH/GMPR family. GuaC type 1 subfamily.