PharMolix/UniProtQA huggingface dataset:
Protein: ALG1_PONAB
Sequence: MAASCLVLLALCLLLPLLLLGGWKRWRRGRTARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVGPRVFQYGVKVVFQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYERFFGRLSHLNLCVTNAMREDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGTHSPFRARSEPEDPATERSAFTERDAGSGLVTRLHERPALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHSLPSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNLRESQQLRWDESWVQTVLPLVMDT
What is the function of this protein?
Catalyzes the addition of the first of nine mannose moieties to form a dolichol-lipid linked oligosaccharide intermediate required for proper N-linked glycosylation.
What are the official names of this protein?
Chitobiosyldiphosphodolichol beta-mannosyltransferase, Asparagine-linked glycosylation protein 1 homolog, Beta-1,4-mannosyltransferase, GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase, GDP-mannose-dolichol diphosphochitobiose mannosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 33 subfamily.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Single-pass type II membrane protein.
Protein: RL14_AGRRK
Sequence: MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYASIGDVIVVSIKEAIPRGRVKKGDVMKAVVVRTAKDIRRPDGSVIRFDTNAAVLIDNKKEPIGTRIFGPVPRELRAKNHMKIISLAPEVL
What is the function of this protein?
Binds to 23S rRNA.  Forms part of two intersubunit bridges in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL14 family.
Protein: NC101_ARATH
Sequence: MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGTGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQELVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNWFTQQMDVGNGNYYHLPDLESPRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQRDDGHVITNDDDHMIMMNTSTGDHHQSGLLVNDDHNDQVMDWQTLDKFVASQLIMSQEEEEVNKDPSDNSSNETFHHLSEEQAATMVSMNASSSSSPCSFYSWAQNTHT
What is the function of this protein?
Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', and to the tracheary elements (TE) specific regulating cis-element (TERE), 5'-CTTNAAAGCNA-3', in the promoter of target genes (e. g.  genes involved in secondary wall biosynthesis, cell wall modification such as xylan accumulation, and programmed cell death) (PubMed:20935069, PubMed:20952636, PubMed:20488898).  Involved in xylem formation in roots and shoots, especially regulating metaxylem vessel differentiation by promoting immature xylem vessel-specific genes expression, especially genes regulating programmed cell death (PCD) and secondary wall formation in tracheary elements (TE) (PubMed:16103214, PubMed:20952636, PubMed:20488898).  Can activate MYB25, MYB46, MYB58, MYB63, MYB83, MYB103, CESA4, LBD15, LBD30, ERF115, XCP1, XCP2, NAC010/SND3, KNAT7, ASL19 and ASL20 expression (PubMed:17890373, PubMed:18952777, PubMed:19088331, PubMed:19122102, PubMed:19808805, PubMed:20935069, PubMed:20952636).
What are the official names of this protein?
NAC domain-containing protein 101, ANAC101, Protein VASCULAR RELATED NAC-DOMAIN 6.
What is the protein family that this protein belongs to?
Belongs to the plant vascular related NAC-domain protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: CULP1_MYCBO
Sequence: MTPRSLVRIVGVVVATTLALVSAPAGGRAAHADPCSDIAVVFARGTHQASGLGDVGEAFVDSLTSQVGGRSIGVYAVNYPASDDYRASASNGSDDASAHIQRTVASCPNTRIVLGGYSQGATVIDLSTSAMPPAVADHVAAVALFGEPSSGFSSMLWGGGSLPTIGPLYSSKTINLCAPDDPICTGGGNIMAHVSYVQSGMTSQAATFAANRLDHAG
What is the function of this protein?
Shows esterase activity, with a preference for short- and medium-chain fatty acids.
What are the official names of this protein?
Carboxylesterase Culp1, Cutinase-like protein 1, Culp1.
What is the protein family that this protein belongs to?
Belongs to the cutinase family.
What are the subcellular locations of this protein?
Secreted.
Protein: Y1406_BRUAB
Sequence: MAQGDDNKQAIGQIIRQEQALIFPSLDENDAFSLGQRIRDIAVKDKLGIAIDISLWDRRLFFAATAGATADNTEWLRRKFNVVRRFHVSTYRLVLEQNREDRMFAPYKALDVADYALAGGGFPIRVSGAGVIGAVIVSGLPQREDHNLVVRAVAEHVGQDPVALALPAA
What are the official names of this protein?
UPF0303 protein BruAb1_1406.
What is the protein family that this protein belongs to?
Belongs to the UPF0303 family.
Protein: Y370_MYCPN
Sequence: MLKLAVGIFISPTLTRFSTGFNLAGSVLDQVLDYVPWIGNGHRYGNNHRGVDDITAPKTGAGSSSGTSTNTSGSRSFLPTFSNVGVGLKANVQGTLGGSQTTTTGKDIPKWPTLDPANLQLWTGAGWRNDKASNKQSDENHTTFKSATGSGQQGGSTTGGSAGNPDSLKQDKISKSGQNLTTQDGAPQSNSTTESASNYDHLPPNLTPTSDWPNALSFTNKNNAQRAQLFLRGLLGSIPVLVNRSGSDDSNKFQATDQKWSYTDLKSDQTKLNLPAYGEVNGLLNPALVETYFGTTRAGGSGSNTTSSPGIGFKIPEQNNDSKAVLITPGLAWTPQDVGNLVVSGTSLSFQLGGWLVTFTDFVKPRAGYLGLQLTGLDASDATQRALIWAKRPWAAFRGSWVNRLGRVESVWDLKGVWQDQAQAAAQAATTAAATGDALPEHPNALAYQISSTDKDSYKASTQSSGQTNSQNTSPYLHLIKPKKVENTTQLDQGLKTCWTPTRFAPSCAKALVQTIPPKPNPNPSKQPHRCLGRIVVTLAVCLVVGVLEEQTAPIRWTSPPLNGWVGGLWGNYPVGVGGIVVRILKVCKTLLFISIFISIFFLNCSLTLFIWTTASLATGLTVVGHFTSTTTTLKRQQFSYTRPDEVALRHTNAINPRLTPWTYRNTSFSSLPLTGENPGAWALVRDNTAKGITAGSGSQQTTYDPTRTEAALTTATTFVLRRYDLAGRCTTSTFRS
What are the official names of this protein?
Putative adhesin P1-like protein MPN_370.
What is the protein family that this protein belongs to?
Belongs to the adhesin P1 family.
Protein: LTN1_CAEEL
Sequence: MSKQQRRKGNAKNASSAAAHEYLAQGGATFVGLTPEMNIFEVASSNRLHQVVEIDDETRIVMKKLTKKDCQTREKGLKELMELINTENSSIESSYEHFCGLVAQLTTDGSPTVRMLTMKVISQFLTKLKKSASKGLKKIIPFVLFAKSDVTNGVAAAASAVIRDGFDADKKRQVVELFVPNTFDLAAKIAEGKHELSLPAEYDASEDLETRKMRLETQSLNTFLSYIKEYGNESKLWEEPARKLFSNSEFIKKTFAGKKEALKVQLLNISYKFSDNIEVILSNPVISTYIQASLDAQTFSTECATAWEGILILLPDERFHAKCSLQKGIYPRLLNLIRKKGNHWRVLKHYLLPAVSVLLQKLENPALITSIITSFTDNLPWQAEASMNAIHCWFCTFSDFVKWILGNDRINLEILKDLSPLIVEMSNQSMHFNTAEATECISGLIHWIIEKKVLENPAEFFDLLKTSIYEVAPPEKSRLFADSLTLPAKHLELAHLHGNLLSNPDVDFHIIRNLARASNSEYFEETCRNINNFEFIENSDRFDMLQAVEIVKLIEMKPSLSLQIKNNHVGRQLLLSENSEIWEKSLKNVPAGVFQEMVNFWHEKRNGKAIAQAVNFLKKMGIQLDTNAAAENVDFLISLLQSLDSKEDPEERKNLVLKLLSALFDAEDEPKLEHFESLKSHLNGDFEQFFEKLFANMEEEDAERVLEIAARFDKLVGFCDADSRGEIAGKMILGRREFDEMSEKLHFLELDVLTVSQHTTIITDALSRPIEHLEEKEATKMVKELGRLALFSVASNYNSSIHQLFAWQMIRVISALGNRYCLKFLDEELQQLRIELEKRVIKSEEIQKLINDGCCCAPNFITDTYGIPEKRQKFEEYSEDMDTKIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLANLTFVKRFIQCGGEIFRAENLEFRDFTLCGIITVLDTSTDILIDSPHSFSENPLLEALTTLYLELFVVLTDATKRGAYSEQSVEEWNEFYTPTIHTYCIRLFRTIRRDQQPTPFVRALLRALFVISEFPTSFSNDDDVANQEFIPELSVFKYPAFQESCIAQAFSLFASNNEHIQLIAYSVARLLMPIMFKLENAAALKSNEDSELPVSTNRRKLSLPVMISKSYPKDHHNPHVGPLLLDLTLLPLENTKDSGFSQEHRVAYCDVIDPFFKNALNALMLDQPFEFRQVPIGCRIPKSQERAYYLESDLSASPIFFDKFASRLLFKSMTLLPAAIRLFYKGMPNCFMPMFQETVTKYASRLLIEQELGKVREAKFEGEMKVRTVPVTGEIIAEYVVEETKMKLTIGLPPDYPLSVPSLTLDKAIVKTDRAKKWLLQLNAYLFHQNGAILEGIEMWKRNVDKGVEGVEDCTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLCRNNFT
What is the function of this protein?
E3 ubiquitin-protein ligase.  Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation.  Ubiquitination leads to vcp/p97 recruitment for extraction and degradation of the incomplete translation product.
What are the official names of this protein?
E3 ubiquitin-protein ligase listerin, RING-type E3 ubiquitin transferase listerin.
What is the protein family that this protein belongs to?
Belongs to the LTN1 family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol.
Protein: ATPG_SHEB2
Sequence: MAGAKEIKTKIASVKNTQKITSAMEMVAASKMRRAQERMAASRPYAESMRKVIGHVAQGSLEYKHPYLEVREAKRVGYIVVATDRGLCGGLNVNLFKKVIADVKSWKAQGAEFEFCPIGARSVQFFKNFGGQVSAHASGLGDAPKLADLIGTVGVMLEAYNEGKLDRLYVVFNKFVNTMTQTPVIEQLLPLPKSEDDETAHRWDYIYEPDPKALLDTLLVRYVESQVYQGVVENIASEQAARMVAMKSATDNAGELINDLQLVYNKARQAAITQELSEIVSGASAV
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
What are the official names of this protein?
ATP synthase gamma chain, ATP synthase F1 sector gamma subunit, F-ATPase gamma subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase gamma chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: CLPP_CERSK
Sequence: MKDPIDLYMNTLVPMVVEQTSRGERAYDIYSRMLKERIIFLSGPVHDGMSSLICAQLLFLEAENPSKEIAMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRVMVHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVRHTGQDLETVEAALERDNFMSAEDAKAWGLIDEILESRNRPDDTAK
What is the function of this protein?
Cleaves peptides in various proteins in a process that requires ATP hydrolysis.  Has a chymotrypsin-like activity.  Plays a major role in the degradation of misfolded proteins.
What are the official names of this protein?
ATP-dependent Clp protease proteolytic subunit, Endopeptidase Clp.
What is the protein family that this protein belongs to?
Belongs to the peptidase S14 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y525_MYCTU
Sequence: MPEETQVHVVRHGEVHNPTGILYGRLPGFHLSATGAAQAAAVADALADRDIVAVIASPLQRAQETAAPIAARHDLAVETDPDLIESANFFEGRRVGPGDGAWRDPRVWWQLRNPFTPSWGEPYVDIAARMTTAVDKARVRGAGHEVVCVSHQLPVWTLRLYLTGKRLWHDPRRRDCALASVTSLIYDGDRLVDVVYSQPAAL
What are the official names of this protein?
Uncharacterized protein Rv0525.
Protein: KAD_FRATN
Sequence: MRIILLGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDEFIIKIVKDRISKNDCNNGFLLDGVPRTIPQAQELDKLGVNIDYIVEVDVADNLLIERITGRRIHPASGRTYHTKFNPPKVADKDDVTGEPLITRTDDNEDTVKQRLSVYHAQTAKLIDFYRNFSSTNTKIPKYIKINGDQAVEKVSQDIFDQLNKR
What is the function of this protein?
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP.  Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
What are the official names of this protein?
Adenylate kinase, AK, ATP-AMP transphosphorylase, ATP:AMP phosphotransferase, Adenylate monophosphate kinase.
What is the protein family that this protein belongs to?
Belongs to the adenylate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RECR_FLAJ1
Sequence: MEFSSKLIEKAVNEMSQLPGIGKRTALRLVLHLLKQPKEQTGFLSQALLNMREDIKFCENCHNISDTKVCEICANSVRNHQTICVVEDIRDVMAIENTGQYKGIYHVLGGKISPIEGVGPSQLNISSLVEKVKSGKVVEIIFALSSTMEGDTTNFYIYKQIAESEIIISTIARGISVGDELEYADEITLGRSILHRVPFEKTFKNN
What is the function of this protein?
May play a role in DNA repair.  It seems to be involved in an RecBC-independent recombinational process of DNA repair.  It may act with RecF and RecO.
What are the official names of this protein?
Recombination protein RecR.
What is the protein family that this protein belongs to?
Belongs to the RecR family.
Protein: Y4143_NOCFA
Sequence: MASATILARVGDKQALGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDAQTTAFVEVKTRRGLGFGTPAEAVTFTKRQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTPGHRPVIDHLKAVF
What are the official names of this protein?
UPF0102 protein NFA_41430.
What is the protein family that this protein belongs to?
Belongs to the UPF0102 family.
Protein: RL23_LEGPH
Sequence: MNAERLMMVLREPHTSEKATVMADKFKQFTFKVLKNATKTEIKLAVEHIFNVKVKSVSVVNVKGKSKRFKQTSGKRSDWKKAFVSLHADQDIDFTVTE
What is the function of this protein?
One of the early assembly proteins it binds 23S rRNA.  One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.  Forms the main docking site for trigger factor binding to the ribosome.
What are the official names of this protein?
50S ribosomal protein L23.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL23 family.
Protein: CYB_PLEAU
Sequence: MTNIRKSHPLMKIINNSLIDLPAPSNISSWWNFGSLLGICLALQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHIGRGLYYGSYLYMETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTNLVEWIWGGFSVDKATLTRFFAFHFLFPFIISAMVMGHLLFLHETGSNNPTGIPSNMDMIPFHPYYTIKDILGLLVMIMSLLALVLFSPDMLGDPDNYSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIIIPLLHTSKQRSMTFRPLSQCMFWLLVADLLALTWIGGQPVEHPYIIIGQLASILYFLIITTLMPLAGLLENRLLKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: RL18_SALTY
Sequence: MDKKSARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: YVBC_VACCC
Sequence: MRMHITAFFTIHNIKMIIYNRPHMAYSFQTFHEYIIHAVFQRGGYLDGAADIVEERFSVSFSPSLTFTRFGIGSTAPFLNLILIISFPCTSTAVT
What are the official names of this protein?
Uncharacterized 10.8 kDa protein.
Protein: VF171_ASFB7
Sequence: MVVYDLLVSLSKESIDVLRFVEANLAAFNQQYIFFNIQRKNSITTPLLITPQQEKISQIVEFLMDEYNKNNRRPSGPPREQPMHPLLPYQQSSDEQPMMPYQQPPGNDDQPYEQIYHKKHASQQVNTELNDYYQHILALGDEDKGMDSMLKLPEKAKRGSDDEDDMFSIKN
What are the official names of this protein?
Uncharacterized protein H171R, pH171R.
What is the protein family that this protein belongs to?
Belongs to the asfivirus H171R family.
What are the subcellular locations of this protein?
Virion.
Protein: TBL32_ARATH
Sequence: MTTALFSPSNRRKRRLTHFFFTVLAFILLAAFIYGHDFISFSRRSLHSPTIVHQSAIVVVVDEPPPPPPTSPPPPSPPPPSPPPPSPPPPSPPPPAFAVGKTPEGCDVFKGNWVKDWSTRPLYRESECPYIQPQLTCRTHGRPDSDYQSWRWRPDSCSLPSFNATVMLESLRGKKMMFVGDSLNRGMYVSLICLLHSQIPENSKSMDTFGSLTVFSLKDYNATIEFYWAPFLLESNSDNATVHRVSDRIVRKGSINKHGRHWRGADIVVFNTYLWWRTGFKMKILEGSFKDEKKRIVEMESEDAYRMALKTMVKWVKKNMDPLKTRVFFATMSPTHYKGEDWGGEQGKNCYNQTTPIQDMNHWPSDCSKTLMKVIGEELDQRAEFPVTVLNITQLSGYRKDAHTSIYKKQWSPLTKEQLANPASYSDCIHWCLPGLQDTWNELFFAKLFYP
What is the function of this protein?
Probable xylan acetyltransferase that plays a role in xylan acetylation and normal deposition of secondary cell walls (PubMed:26745802).  Required for 2-O-monoacetylation, 3-O-monoacetylation and 2,3-O-diacetylation of xylosyl residues in xylan (PubMed:26745802).  Required for the formation of 3-O-acetylated, 2-O-glucoronic acid-substituted xylosyl residues (PubMed:26745802).  May act as a bridging protein that binds pectin and other cell wall polysaccharides.  Probably involved in maintaining esterification of pectins (By similarity).
What are the official names of this protein?
Protein trichome birefringence-like 32.
What is the protein family that this protein belongs to?
Belongs to the PC-esterase family. TBL subfamily.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Single-pass type II membrane protein.
Protein: MGLA2_PHOPR
Sequence: MTTINKNEFLLEMTGISKEFPGVKALDKVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYEKNEGDIVFLGKSINFSSSKEALEAGVSMVHQELNQVLQRTVMDNIWLGRYPTKGFFVDQKKMYEETKKVFEELDIDIDPNVKVATLSVSQMQMLEIAKAFSYDAKIVIMDEPTSSLTEKEVNHLFKIIKKLKEKGCGIVYISHKMEEIFEICDEITILRDGIWVDTRPLEGLTMDQIIGMMVGRELTQRFPEKTNTPKETILAVKNLTALNQPSVNDVSFELRKGEILGIAGLVGAKRTDIVETLFGIRERSSGDIILHGKHLKNKDAHEAINNGFALVTEERRSTGIYSNLDITFNSLVANVEQYKEGFGLLSNRKMKSDTQWVIDAMSVKTPSHKTMIGSLSGGNQQKIIIGRWLLTGPEILMLDEPTRGIDVGAKFEIYQLILELANKDKGIIIISSEMPELLGITDRILVMSNGRAAGIVETKNTTQNEILSLASRYL
What is the function of this protein?
Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Galactose/methyl galactoside import ATP-binding protein MglA 2.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Galactose/methyl galactoside importer (TC 3.A.1.2.3) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: NUOA1_CHLT3
Sequence: MLESYFPIFVVISIAIILAVVLLSIGKIIGPKRNNPEKLTPYESGMDPVGSTRTRVTVRFYLVAMIFIVFDIEVIFMYPWAVSFRELSGFYGLIPMVTFVLILLAGYYYILKKKALDWDEE
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit A 1, NADH dehydrogenase I subunit A 1, NDH-1 subunit A 1, NUO1 1.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 3 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: CAR_HALS3
Sequence: MDPASSDMGGEATGEHLADELCEAYLGDNEDDGGDELQRLSRERDFWKHMFNQLVAEYPEGILITAADGTVTHWNERFSDHMKMARSDALGEDASDVFSTAEESETLPEAVVRTGDTVEEEEPHDVPTDSLCQYHGVPLRAPTGDVVGSFGVVPDISEKVKNQRELHDLHETVSSNVGEHLSELSESIDEVGSFAEETEAFAGEEIERMEGVADEVSNQSATIEEIASSAEEVSQASQRAQDRATEGEQTAETAIDRMGAVQESAERVNDTIDGLTSQADEMSEIIDAINDIADQTNMLALNASIEAARAGEKGEGFAVVADEVKSLAEESQERADEIEQMIVEMVETTDQTADRIGQTTTEIEEAITAVRETLDSLQEIRKAVDETATGVKEVAGATDDHAASTEQVAATTDEAVDKLTELEDRLDNLSQIASEQHDRVAEIEDMVDELVE
What is the function of this protein?
Mediates chemotaxis towards arginine.  Probably transduces the signal to the histidine kinase CheA.
What are the official names of this protein?
Transducer protein Car, Cytoplasmic arginine transducer protein.
What is the protein family that this protein belongs to?
Belongs to the methyl-accepting chemotaxis (MCP) protein family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AMY1_CAPAA
Sequence: GIYCIFEGGTPDDR
What are the official names of this protein?
Alpha-amylase 1, 1,4-alpha-D-glucan glucanohydrolase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 13 family.
Protein: STLP3_ORYSJ
Sequence: MKRRHWSHPSCGLLLLVAVFCLLLVFRCSQLRHSGDGAAAAAPDGGAGRNDGDDVDERLVELAAVDPAAMAVLQAAKRLLEGNLARAPERHRDVALRGLREWVGKQERFDPGVMSELVELIKRPIDRYNGDGGGGGEGEGRRYASCAVVGNSGILLAAEHGELIDGHELVVRLNNAPAGDGRYARHVGARTGLAFLNSNVLSQCAVPRRGACFCRAYGEGVPILTYMCNAAHFVEHAVCNNASSSSSGAADATAAAPVIVTDPRLDALCARIVKYYSLRRFARETGRPAEEWARRHEEGMFHYSSGMQAVVAAAGVCDRVSVFGFGKDASARHHYHTLQRRELDLHDYEAEYEFYRDLESRPEAIPFLRQRNSGFRLPPVSFYR
What is the function of this protein?
Possesses sialyltransferase-like activity in vitro.  Transfers sialic acid to the glycoprotein asialofetuin.  The transferred sialic acid is linked to galactose of Gal-beta-1,3-GalNAc through alpha-2,6-linkage.
What are the official names of this protein?
Sialyltransferase-like protein 3, OsSTLP3.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 29 family.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Single-pass type II membrane protein.
Protein: SSRP_STRPB
Sequence: MAKGEGHILAQNKKARHDYHIVETVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNADPERTRKLLLKKREITHLANELKGSGMTLAPLKVYLKDGFAKVLIGLAKGKHEYDKRETIKRRDQERDIKKQMKHYNAR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: LPXK_BLOPB
Sequence: MFDRIWFKSSFFYLFLLPFSWLYGVISTLNRISYQYGWRKVYRFSVPIIIIGNLTIGGNGKTPMVLWLVEHLKRRGWKVGVISRGYKGKSNNYPIIINMNSHSEECGDEPMLIWKRTGVSVAVSPKRADAVAALLRKQELDIIISDDGLQHYALFRDIEWVIVNSVLRFGNGCWLPAGPMRERINRLHTVQAIIANGSEVGIQSGEVLMQLFPIAVVNILTGERKPLYFLNNVVAIAGIGYPTQFFDTLRSYGIIPIRSISFSDHHVYSEKMLTSLTKKDEILLMTEKDAVKCIDFAHDNWWYVHTEVKINKIDTHNLLSMVENKIRYYKGSRYNVQ
What is the function of this protein?
Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
What are the official names of this protein?
Tetraacyldisaccharide 4'-kinase, Lipid A 4'-kinase.
What is the protein family that this protein belongs to?
Belongs to the LpxK family.
Protein: GD_SUHVR
Sequence: MLLAALLAALVARTTLGADVDAVPAPTFPPPAYPYTESWQLTLTTVPSPFVGPADVYHTRPLEDPCGVVALISDPQVDRLLNEAVAHRRPTYRAHVAWYRIADGCAHLLYFIEYADCDPRQVFGRCRRRTTPMWWTPSADYMFPTEDELGLLMVAPGRFNEGQYRRLVSVDGVNILTDFMVALPEGQECPFARVDQHRTYKFGACWSDDSFKRGVDVMRFLTPFYQQPPHREVVNYWYRKNGRTLPRAHAAATPYAIDPARPSAGSPRPRPRPRPRPRPKPEPAPATPAPPDRLPEPATRDHAAGGRPTPRPPRPETPHRPFAPPAVVPSGWPQPAEPFQPRTPAAPGVSRHRSVIVGTGTAMGALLVGVCVYIFFRLRGAKGYRLLGGPADADELKAQPGP
What is the function of this protein?
Envelope glycoprotein that binds to host cell entry receptors.  May trigger fusion with host membrane, by recruiting the fusion machinery composed of gB and gH/gL (By similarity).
What are the official names of this protein?
Envelope glycoprotein D, gD, Protein gp50.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae glycoprotein D family.
What are the subcellular locations of this protein?
Virion membrane; Single-pass type I membrane protein. Note=During virion morphogenesis, this protein probably accumulates in the endosomes and trans-Golgi where secondary envelopment occurs.
Protein: GCH1L_MYCBO
Sequence: MSVRLADVIDVLDQAYPPRLAQSWDSVGLVCGDPDDVVDSVTVAVDATPAVVDQVPQAGLLLVHHPLLLRGVDTVAANTPKGVLVHRLIRTGRSLFTAHTNADSASPGVSDALAHAVGLTVDAVLDPVPGAADLDKWVIYVPRENSEAVRAAVFEAGAGHIGDYSHCSWSVAGTGQFLAHDGASPAIGSVGTVERVAEDRVEVVAPARARAEVLAAMRAAHPYEEPAFDIFALVPPPVGSGLGRIGRLPKPEPLRTFVARLEAALPPTATGVRAAGDPDLLVSRVAVCGGAGDSLLATVAAADVQAYVTADLRHHPADEHCRASQVALIDVAHWASEFPWCGQAAEVLRSHFGASLPVRVCTICTDPWNLDHETGRDQA
What are the official names of this protein?
GTP cyclohydrolase 1 type 2 homolog.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
Protein: CRCB_HELPS
Sequence: MNFIFLWAALGGAIGSSLRYFVGKMMPSKFLMFESFPLGTFSVNVIGCFVIGFMGHLAVKKVFGDDFGIFFVTGVLGGFTTFSSYGLDTLKLLQKSQYIEAVSYALGTNILGLIGVAIGWFLAKNFVGIN
What is the function of this protein?
Important for reducing fluoride concentration in the cell, thus reducing its toxicity.
What are the official names of this protein?
Putative fluoride ion transporter CrcB.
What is the protein family that this protein belongs to?
Belongs to the CrcB (TC 9.B.71) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.