PharMolix/UniProtQA huggingface dataset:
Protein: RBM38_MOUSE
Sequence: MLLQPACSPSVFPRPSAAPSAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAVGVQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPATPVPSLSSPYLEYTPASPAYAQYPPATYDQYPYAASPAAATSFVGYGYPAAVPQALSAAAPAGTTFVQYQAPQLQPDRMQ
What is the function of this protein?
RNA-binding protein that specifically bind the 3'-UTR of CDKN1A transcripts, leading to maintain the stability of CDKN1A transcripts, thereby acting as a mediator of the p53/TP53 family to regulate CDKN1A.  CDKN1A is a cyclin-dependent kinase inhibitor transcriptionally regulated by the p53/TP53 family to induce cell cycle arrest.  Has the ability to induce cell cycle arrest in G1 and maintain the stability of CDKN1A transcripts induced by p53/TP53.  Also acts as a mRNA splicing factor.  Specifically regulates the expression of FGFR2-IIIb, an epithelial cell-specific isoform of FGFR2 (By similarity).  Plays a role in myogenic differentiation.
What are the official names of this protein?
RNA-binding protein 38, RNA-binding motif protein 38, RNA-binding region-containing protein 1, ssDNA-binding protein SEB4.
What is the protein family that this protein belongs to?
Belongs to the RBM38 family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol. Nucleus.
Protein: Y2061_SULIK
Sequence: MKRLPAVAGSFYESDPKKLKMQIEWSFRHNIGPRDIPKQTYEKKKRDNLFFVVPHAGYIYSGPVAAHSYYYLVSEGRPDVVIILGPNHTGLGSYVSAWPKGEWETPLGSVKIDEEILMQLVKESEVIDLDEKSHLYEHSIEVQLPFLQYFFDDDFKIVPIVIMMQTPEIAEFLADAIYNVMQKNPDKDIVVLASSDMNHYDPHEITVKKDEEAIEKIQQLDYKGLYEVVEGKDVTLCGYGPIMVNLILAKKFGKKAYILKHATSGDTSGPKDSVVGYLAARFGS
What are the official names of this protein?
MEMO1 family protein M164_2061.
What is the protein family that this protein belongs to?
Belongs to the MEMO1 family.
Protein: V010_FOWPN
Sequence: MGSLVRLLKELYVPGKDICISPRGVYTILMNIMIGCKKETRDKIKDLLGIFGNYVPIPDKSEYYVEYYDDKDELINKSIMLIEEGYPIKRDFINSSYDIFNAKVVSFTDDTISETINKWVELSTRGLIKDFSISLADDIRLAIINVLYFKSKWKYPFDTELTSKHPFKKYNGTDVMIDTMMIQDVAFYYKHDEDIRSQVVMLEYEDYRFVMFIIIPDSVTGIDGVVDSLNNGKNINKIISKKDMTLKEIVLYLPKFELEDDVDLKDALIHMGCNDLFKSGELVGISDTKTLRIGNIRQKSVIKVDEYGTEAASVTESCTTDGIKKIPIVKANVPFMFLVADVQTKIPLFLGIFQG
What are the official names of this protein?
Uncharacterized serpin-like protein FPV010.
What is the protein family that this protein belongs to?
Belongs to the serpin family. Poxviruses subfamily.
Protein: AROB_SHEDO
Sequence: MQQIQVNLGDRSYPIHIGLDLLKQQQTFQSLQSKKVFIVTNDVVAPLYLTQVKAALADCASVDVFVLPDGEKNKDLAHLEQIFSALLEKNYARDTTLLALGGGVIGDMTGFAAACYQRGVPFVQVPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQPQCVIIDTQCLHSLPKAEFDAGMAEVIKYGIIWDAEFFLWLENNIAALKALDTQALTYAIAKCCAIKADIVSQDETEQGVRALLNLGHTFGHAIEAQMGYGNWLHGQAVAAGSVLAAKTALALGLLDALSVQRIENLFRAFDLPIDGPQSMAFSDYMRHMRRDKKVLASKIRLILPQAIGQAGIYSDVDEALLAQVINPS
What is the function of this protein?
Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
What are the official names of this protein?
3-dehydroquinate synthase, DHQS.
What is the protein family that this protein belongs to?
Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DTD_PSEPK
Sequence: MRGLLQRVRGARVEVAGEVVGAIDQGLLVLVAVEPEDSREQADKLLHKLLNYRVFSDEQGKMNLSLKDVGGGLLLVSQFTLAADTRNGMRPSFSTAAPPALGAELFDYLLQQAKAQYADVASGRFGADMQVHLVNDGPVTFMLQI
What is the function of this protein?
An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs.  Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS.  Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site.  By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
What are the official names of this protein?
D-aminoacyl-tRNA deacylase, DTD, Gly-tRNA(Ala) deacylase.
What is the protein family that this protein belongs to?
Belongs to the DTD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MURI_STRU0
Sequence: MDNRPIGFLDSGVGGLTVVRELMRQLPHESIVYVGDSARAPYGPRPADQIREFTWELVNFLLTKNVKMIVFACNTATAVAWEEVKNALSIPVLGVILPGSSAAIKSTTSGKVGVIGTPMTIQSDIYRQKIQLLAPQIEVLSLACPKFVPIVESNETKSSVAKKIVYETLEPLVGKVDTLVLGCTHYPLLRPIIQNVMGSEVTLIDSGAECIRDISVLLNYFQINASREEKKADNLFFTTAGTDTFKEIANAWLEESIDVEHTDL
What is the function of this protein?
Provides the (R)-glutamate required for cell wall biosynthesis.
What are the official names of this protein?
Glutamate racemase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/glutamate racemases family.
Protein: COL12_DANRE
Sequence: MKDDFNDEEEVQSFGYKRFGIQEGNECTKCKNDWALRVAIALLYVLCALLTIAVAVLGYKVVQRMDNVTEGMQNYGGKITAVETDLKKLDDQTGEKSENATSELHSFKLEFQTLQKQLSDVIVKTSNNRAVLKELQLAGEDMQSGHLSLRDLLESNANVISKVNHTLNTYNSLIDGLKTETARLQSDLHVQTSEQGQNSHSISTLNFTQTQQRNLISSLQRSVEDTGQAVQKLKNDYQSLQQVARQTKADADWLREKVQNLQALAANNSLLTRSNSDSLEDVTSQLTTLSEQVQNTSTITDSHDQSLRELMDQQRDHDNATSIRFDALEARLDSNEGEMDRITGNVSFTTQLLRAISTDLNGLRTCSETVTRHSELLHGLNNSVAETRAESTELKAQQEELAVRLDKEVSSLSIVMDEMKLVDNKHSQLITNFTILQGPPGPRGPRGDKGSMGLPGKTGPKGEKGEKGAPGDAGPKGEKGPAGPPGVPGLKGPPGSRGSPGPKGSRGSGGRQGPSGEKGDPGIPGMPGRDGQPGPTGPQGPQGLRGPAGPAGLEGARGPVGPIGPPGPPGLPGLPAPPIVVPPVDPQGFVNRQVAPPPTTTPGCPPQWKGFREQCYHFSAPMESLNFDEAKERCSNLSSSMLIINDEEEQLWIKRQISGKGYFWLGLKWKPGQPDNWSHGHEAGEDCAGLIHEASWNDFFCTERIGFICERTNESKVPVL
What is the function of this protein?
Scavenger receptor that displays several functions associated with host defense.  Binds to carbohydrates (By similarity).
What are the official names of this protein?
Collectin-12.
What are the subcellular locations of this protein?
Membrane; Single-pass type II membrane protein.
Protein: SYS_CHRSD
Sequence: MLDPKLLRSDLPLVAERLARRGFTLDTARLEALESRRRELQTETERLQNERNTRSKAIGQAKASGEDIQPLLDEVSDLGERLDAAKARLAEVQAEWDESVAALPNLPHDSVPQGLDEADNVELHRWGTPGTFDFEVRDHVDLGAKFGYLDFEMAAKLTGSRFAVMRGPIARLHRALAQFMLDKQTREHGYEECYVPYIVNDASLTGTGQLPKFGEDLFKLEGDHDFYLIPTAEVPLTNIAREQIFTPAELPLKLTAHTPCFRSEAGAYGRDTRGMIRQHQFDKVEMVQIVDPATSYDALESMRGHAEAILQALELPYRVVTLCAGDMGFGAAKTYDLEVWLPSQETYREISSISNCEDFQARRMQARMRHPEQKKPQLVHTLNGSGLAVGRCLLAVLENCQQADGSIVIPEVLRGYMDGVERINA
What is the function of this protein?
Catalyzes the attachment of serine to tRNA(Ser).  Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
What are the official names of this protein?
Serine--tRNA ligase, Seryl-tRNA synthetase, SerRS, Seryl-tRNA(Ser/Sec) synthetase.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CEMA_PHAVU
Sequence: MKKKSISLLYLISIVFLPWCISFTFKKSLESWFINWWNTSQSEIFLNDIKEKSILKKFIELKELFFLDDMLKECPKTYLQNLRTGIYKETIQLIKTHNEDRMNTILHFSTNIICFFILSGYSILGNQELILINSLVREFIYNLSDTIKAFSILLLTDLCIGFHSTRGWELIMGFVSKDFGFAQNDQIISGLVSTFPVILDTIFKYWIFRYLNRISPSLVVIYHSMND
What is the function of this protein?
May be involved in proton extrusion.  Indirectly promotes efficient inorganic carbon uptake into chloroplasts.
What are the official names of this protein?
Chloroplast envelope membrane protein.
What is the protein family that this protein belongs to?
Belongs to the Cema family.
What are the subcellular locations of this protein?
Plastid, chloroplast inner membrane; Multi-pass membrane protein.
Protein: PKHA8_RAT
Sequence: MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTRMDLIIPGEQYFYLKARSVAERQRWLVALGSAKACLTDSRTQKEKEFAENTENLKTKMSELRLYCDLLVQQVDKTKEVATAGVADSEEGIDVGTLLRSTCNTFLKTLEECMQIANAAFTSELLYHTPPGSPQLAVLKSSKMKHPIIPIHNSLERPIELNSCENGSLSVEVNGDEELLMKTKKSSLYLKSTKADCNISSEENTDGNTTVQGERMKEDGEENLESHDRDLAQPGSDSVCSPESPWEDSEEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVARVRNSATEALLWLKRGLKFLKGFLTEVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFSAGMQRDLSLYLPAMEKQLAILDTLYEIHGLESDEVV
What is the function of this protein?
Cargo transport protein that is required for apical transport from the trans-Golgi network (TGN).  Transports AQP2 from the trans-Golgi network (TGN) to sites of AQP2 phosphorylation.  Mediates the non-vesicular transport of glucosylceramide (GlcCer) from the trans-Golgi network (TGN) to the plasma membrane and plays a pivotal role in the synthesis of complex glycosphingolipids.  Binding of both phosphatidylinositol 4-phosphate (PIP) and ARF1 are essential for the GlcCer transfer ability.  Also required for primary cilium formation, possibly by being involved in the transport of raft lipids to the apical membrane, and for membrane tubulation (By similarity).
What are the official names of this protein?
Pleckstrin homology domain-containing family A member 8, PH domain-containing family A member 8, Phosphatidylinositol-four-phosphate adapter protein 2, FAPP-2, Phosphoinositol 4-phosphate adapter protein 2.
What are the subcellular locations of this protein?
Golgi apparatus, trans-Golgi network membrane. Membrane; Peripheral membrane protein. Note=Binds through its PH domain to PtdIns(4)P and ARF1, and subsequently localizes to TGN exit sites.
Protein: SSRP_STRP3
Sequence: MAKGEGHILAQNKKARHDYHIVETVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNADPERTRKLLLKKREITHLENELKGSGMTLVPLKVYLKDGFAKVLIGLAKGKHEYDKRETIKRRDQERDIKKQMKHYNAR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: KAD_STAEQ
Sequence: MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDVIDILDHL
What is the function of this protein?
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP.  Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
What are the official names of this protein?
Adenylate kinase, AK, ATP-AMP transphosphorylase, ATP:AMP phosphotransferase, Adenylate monophosphate kinase.
What is the protein family that this protein belongs to?
Belongs to the adenylate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LIPB_KLULA
Sequence: MSKLMLIGTNYWYPSKFGCTIFRKVRFQSTLKCTSTARTQPIDPSAKTIRHLQFVKEIPFETGIDIQEKFVRAHLDIKQLQSKIKREMTNLQKEHNAEIQLNFHEQMILDNINQMKPNPIVLTFQFEPTYTGGKRVKKQITDEQIARYEGFIPSKQKYNKKPKFVQAERGGQVTFHGPGQIVAYIILDLKTFQNLPAKCLVSTIDNAAMNALKVVPKFQGSDEPLNLITQKTNDTGVWVSNQEKIASIGIHVRRSVTSHGICINVDPDLSYMNSFTMCGLSEKKATSIREQVPDSSTSVNDVAVAFVNQLAKLLGITTVERIQLDDLPIYTD
What is the function of this protein?
Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes.  Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity).
What are the official names of this protein?
Octanoyltransferase, mitochondrial, Lipoate biosynthesis protein, Lipoate-protein ligase, Lipoyl ligase, Lipoyl/octanoyl transferase, Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase.
What is the protein family that this protein belongs to?
Belongs to the LipB family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: NUP88_DROME
Sequence: MSLTDVLELNKTELFAKIRNGLPVVQRTQNLLDCKDDLLFAWHAKDSCLLVRNWRSSLAAKVNIQFQTLIPSSLVSLEVDRVLASNEGSLVALSGPRGVVIMELPRRWGPDGYYKDGKPVITCRTFGLDTQLFLKNPHLEVRQVRWHPHSVSDSTLLVLLNNNTIRVYNHSKLRHVWQVGPPVLRSGANNSLCDFGELAVDFDIAPAAKPRVTEPETAGNNETTLDKSNKTLVAAKSLPKQERIEWPMVVLRENGNIYILMTGVDSENTRLQGPVTITPQAHDNYGLESCALMIIPSLPPTIVIAESNGKLHHALLMEAEATEHSFNEVDDSVLIEPAEYVVHVLETVELELGISAPATGKEGGNCPIYLKRDLINELRYFAYHNAGLHAVTVSFIAELQRYLESESDEDRLELAVSASAEYILCTKFDSSETVNAVFGLALLQIPAGIVLLLGSGQVISLKLVIDAQLLVTPNENKPVDSEVSQQESGPPFVDTIKSLLQRSVNQPILADKLSSPSAQESFELLNQAIEVLREQYLKRHDLVRAAFTRHINQIQLKKEQQLQEIQDLEQERELISERAHKLAERFEEISYNQELLVRKCNALMQRANASLPNSVIAEREFSQEVIRLNKVTQSLAAGLETAKKTFNKQRYHIAQSQEDLKKNAYELPEKQHRTITEILTQLTGEIDRQITDVKRINKIVGI
What is the function of this protein?
Essential component of nuclear pore complex (PubMed:10921908, PubMed:14638854, PubMed:17032737).  Required for the anchoring of Nup214 and emb on the nuclear envelope and thereby attenuates nuclear export signal (NES)-mediated nuclear export (PubMed:14638854).  Together with Nup214, required for the nuclear import of the Rel family transcription factors dorsal (dl) and Dorsal-related immunity factor (Dif) and the activation of an immune response (PubMed:10921908, PubMed:17032737).
What are the official names of this protein?
Nuclear pore complex protein Nup88, 88 kDa nuclear pore complex protein, Nucleoporin Nup88, Protein members only, dNup88.
What are the subcellular locations of this protein?
Nucleus, nuclear pore complex. Nucleus membrane; Peripheral membrane protein; Cytoplasmic side. Chromosome. Nucleus, nucleoplasm. Note=Is recruited to non-active chromatin sites (PubMed:20144761). Localization to the nuclear rim is promoted by Nup214 (PubMed:17032737).
Protein: RLP15_ARATH
Sequence: MEGKVFLGHNLIWVMLLMGQLHGYKSCIDEEKIALFELRKHMISRTESESVLPTWTNDTTSDCCRWKGVACNRVSGRVTEISFGGLSLKDNSLLNLSLLHPFEDVRSLNLSSSRCSGLFDDVEGYKSLRKLRKLEILDLASNKFNNSIFHFLSAATSLTTLFLRSNNMDGSFPAKELRDLTNLELLDLSRNRFNGSIPIQELSSLRKLKALDLSGNEFSGSMELQGKFCTDLLFSIQSGICELNNMQELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFDNDFEGSFSFGSLANLSNLMVLKLCSKSSSLQVLSESSWKPKFQLSVIALRSCNMEKVPHFLLHQKDLRHVDLSDNNISGKLPSWLLANNTKLKVLLLQNNLFTSFQIPKSAHNLLFLDVSANDFNHLFPENIGWIFPHLRYLNTSKNNFQENLPSSLGNMNGIQYMDLSRNSFHGNLPRSFVNGCYSMAILKLSHNKLSGEIFPESTNFTNILGLFMDNNLFTGKIGQGLRSLINLELLDMSNNNLTGVIPSWIGELPSLTALLISDNFLKGDIPMSLFNKSSLQLLDLSANSLSGVIPPQHDSRNGVVLLLQDNKLSGTIPDTLLANVEILDLRNNRFSGKIPEFINIQNISILLLRGNNFTGQIPHQLCGLSNIQLLDLSNNRLNGTIPSCLSNTSFGFGKECTSYDYDFGISFPSDVFNGFSLHQDFSSNKNGGIYFKSLLTLDPLSMDYKAATQTKIEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEFGGLLELRALNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQLTELTSLSVFKVSHNNLSGVIPQGRQFNTFDAESYFGNRLLCGQPTNRSCNNNSYEEADNGVEADESIIDMVSFYLSFAAAYVTILIGILASLSFDSPWSRFWFYKVDAFIKKVRNLLL
What are the official names of this protein?
Receptor-like protein 15, AtRLP15.
What is the protein family that this protein belongs to?
Belongs to the RLP family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type I membrane protein.
Protein: GDU5_ARATH
Sequence: MRQFPSIRGNINEKMMTTMVESQTRSPWRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTEDEEKQTESGEKVVAKAFEEKILVIMAGQNNPTFLATPVAAKICLDCVNMEKKEGQNGESKVTEENH
What is the function of this protein?
Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism.  Stimulates amino acid export by activating nonselective amino acid facilitators.
What are the official names of this protein?
Protein GLUTAMINE DUMPER 5.
What is the protein family that this protein belongs to?
Belongs to the GLUTAMINE DUMPER 1 (TC 9.B.60) family.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.
Protein: T2FA_DICDI
Sequence: MSESTNNPNEKTYKINLVKGTKKWNIAKFSNKIDLSSFSKPVRMYKFNPIANMINNESNNFGQPTTSTYTNNHYSYKNIQPTMTSAPNGTNSTGTTPNTTTTTTTTTTTTTTTTTAAGTPGAPNPAAATQPFVRKKRYEAKPVNPKTIPWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQSDGSIKAVPCNDWYNFRPKKEFQSLTTEEAEDFMKKKNQEWDVFTSRLQKKTDPSGSGSGGSESSGKKSIEELEEAEHRNRNEDPNRYKTTNEEKKKKKAPARRREREDEGNGEDGDAPDFESKFDDDDDDTYMDGDGLTGEDENQIEEDEEEEDVDLTEGGLEMKKMIKKQQQQNDSEDDLADDDDKKDNNGGTGGGDDEDDDEDDEDPDQDDLSNLPKVFGKSNADGTTNSSVKKEDDGGKDSKSSKKSKKKDKDSSPKSKEKKSKKNKSDSSVDNRESKKIKKEPSSPQAVQPNSPSQQQQQQQQNIDPNDPPFTEEYIKIVLQKSKKVKSLDLINIFKGPLKNPDNKPIFLAMVHNVARVVEENGVKYLIPK
What is the function of this protein?
TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB.  It promotes transcription elongation (By similarity).
What are the official names of this protein?
General transcription factor IIF subunit 1, Transcription initiation factor IIF subunit alpha, TFIIF-alpha.
What is the protein family that this protein belongs to?
Belongs to the TFIIF alpha subunit family.
What are the subcellular locations of this protein?
Nucleus.
Protein: STR8_ARATH
Sequence: MRVSPAATLSVSLTTPLPITLTKARFSGEPLRLKQYVLSNQICSRPKHLLSEFKPTRRWTFSCKCRNRGRNGYAKFDDEGEDFIVVNFYRFVSIGDPEAEIEKHLSFLKDLNIRGRIYLNEQGINAQYSGPSKDALAYVEWLKGDDRFSDLLVQMSPAMNRHAFPKLKLQNKPSLVQYEGGISHLPLLDPPMRAKPLEPSEWKRKLKDLTDDDEASPSNSGKSYILLDVRNGYEWDVGHFRGAHRPEVDCFRNTSFGLSDEKEAPSDPLINVDKEKTDILMYCTGGIRCDVYSTVLRQRGFKNLYTLKGGVSHYLKEEGTAEWVGNLFVFDSRLSLPPAAYNDNVVDKAVGDNVVDEAGRTPQTPVDTSFARCYLCNSQVQELRHRNCANLDCNRLFLCCAECVVDLKGCCCSDCISAPRLRPVLHGVKRYEKWHVYRDSEEQNAPLV
What are the official names of this protein?
Rhodanese-like domain-containing protein 8, chloroplastic, Sulfurtransferase 8, AtStr8.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RL6_NOSS1
Sequence: MSRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPANVSVSQEGETLQVTRRDETRTSRQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLVLNMGYSHQVQIEPPDGIQFVVENNTNVIVSGYDKEIVGNTAAKVRAVRPPEPYKGKGIRYAGEVVRRKAGKTGKGGKK
What is the function of this protein?
This protein binds to the 23S rRNA, and is important in its secondary structure.  It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
What are the official names of this protein?
50S ribosomal protein L6.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL6 family.
Protein: TPST2_BOVIN
Sequence: MRLSMRRALLAAGLALALVLAVHLGQRVLECQAVLGGPRGPRRTMRPEQEDLMMVGADHVEYRYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEETRIIPRVLAMRQAWSKSGREKLRLDEAGVTDEVLDAAMQAFILEVIAKHGEPARVLCNKDPFTLKSSVYLSRLFPNSKFLLMVRDGRASVHSMITRKVTIAGFDLSSYRDCLTKWNKAIEVMYAQCMEVGRDKCLPVYYEQLVLHPRRSLKVILDFLGIAWSDAVLHHEDLIGKPGGVSLSKIERSTDQVIKPVNLEALSKWTGHIPGDVLRDMAQIAPMLARLGYDPYANPPNYGNPDPIVINNTHRVLKGDYKTPANLKGYFQVNLNSTSSHLGSS
What is the function of this protein?
Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides, using 3'-phosphoadenylyl sulfate (PAPS) as cosubstrate.
What are the official names of this protein?
Protein-tyrosine sulfotransferase 2, Tyrosylprotein sulfotransferase 2, TPST-2.
What is the protein family that this protein belongs to?
Belongs to the protein sulfotransferase family.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Single-pass type II membrane protein.
Protein: ATP6_CITBB
Sequence: MVHPYLFLNFFRELLHPLGFSEAGADAVVYTWLIMIGLVVLSIAATKRLQAVPSGLQNFMEVIVGGIENMLVETMGEHGKPFFPLVATLALFILVSNLIGLVPGFFPPTANINTTAACAVVVFVTTHIVGVKHHGAGYIKHFLGPIAWLAPMMFFIEVIGHLSRVISLTLRLFGNMNGHELVLIIFFGLAPFIVPLPMMLMGVLVSFIQAFVFMLLAMIYIQGSLEHAH
What is the function of this protein?
Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
What are the official names of this protein?
ATP synthase subunit a, ATP synthase F0 sector subunit a, F-ATPase subunit 6.
What is the protein family that this protein belongs to?
Belongs to the ATPase A chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: SYH_SULNB
Sequence: MINPLRGMKDLTFDEAQRFVHIVKTAITIAKRYGYSYIETPILEETALFKRSVGDSSDIVSKEMYQFEDKGGNDVCMRPEGTAGVVRAFISAKLDRQPVKQKFYYYGPMFRYERPQKGRLREFHQFGCESFGEASVYEDFTIIIMISQIFQALGIGFELKINSLGCPECMPPYRQNLVGFLTEISEDLCTDCNRRIGMNPIRVLDCKNEACQSLLKQSPKLIENLCEHCDTDFKKLTVLLDDAGIAYEVDTNLVRGLDYYNKTAFEFVSNEIGSQSAIAGGGRYDKLVEYLDGKPTPAVGFAIGIERIMELVQMPETKKEGYYMGAMIPEAIEKIIMLGNRKRATDKVTVEYSSKGFKSHMKGVDKANARYALLIGEDELKNGTVWLKDLETKEEKSILLSEV
What are the official names of this protein?
Histidine--tRNA ligase, Histidyl-tRNA synthetase, HisRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AROC_SHEDO
Sequence: MSGNSIGQNFVVTTFGESHGVALGCIIDGCPPGLELSAEDMQHDLDRRRPGTSRYTTARREADEVKILSGVFEGKTTGTSIGLMIENTDQRSQDYSNIKDTFRPGHADYTYQQKYGMRDYRGGGRSSARETAMRVAAGAVAKKYLKQVHGIEVTGYLSQLGPISAETIDLTQVEQNAFFFPDVSKLEALDEYMRELRKSGDSIGAKVSVIATGVPVGLGEPVFDRLDADIAHALMGINAVKGVEIGDGFAVVNQKGSQGRDLMSPLGFESNHAGGVLGGISSGQPIVAHMALKPTSSISVPGQSMTVQGDTVEMVTKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRHRAQNNAVVSDTPKIGMR
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: PNP_HYDCU
Sequence: MSKFIKSFQYGKHEVRFETGEIARQADGAVMVAMGDTQLLVTVVGAKNAKAGQDFFPLTVQYQEKAYAAGRIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVIATVVSLDPEIGTEVPAMLGTSAALSISGIPFDGPIGAAVVGYKDNDYILNPSSQELQESDLELSVAGTSDAVLMVESEASELSEEIMLGAVMFGHEQMQVAIDAIKELKAEVGKPAWNWEAAEEDIDLKTKVFDAIRSDIEAAYDIADKMDRYAAIDAAKTKVMEALAATEENPEGYDAGDIEKMVGKLQKEIVRGRIIAGEPRIDGRDTQTIRSIDCQVGILPKVHGSALFTRGETQAIVVTTLGTEKDAKMVDDLTGSYNDRFMLHYNFPPYSVGECGRVGSPGRREIGHGMLARRGVAALLPTADEFPYTIRVVSEITESNGSSSMATVCGTSMSLMHAGVPLAAPIAGIAMGLVKEESGFAVLSDILGDEDHLGDMDFKVAGTEQGVTALQMDIKITGITQEIMHIALKQAKEGRLHILKEMEKAIGSSNQDVATTAPRFFTVKVKPEKVREIIGKGGATIRSITEETGVTIEIDDDGNVKIAAVDDESANAAKARIAEITAEPEIGKVYDAKVVKIVDFGAFVSYMPGREGLVHVSQIADERVEDVNEYLKEGQEIKVRLTDVDKQGRVKLSIKAV
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.