PharMolix/UniProtQA huggingface dataset:
Protein: YIDD_RICAE
Sequence: MTRILLLLLGFYQYFISPLLGNNCRFHPTCSEYAKEAISMHGSIKGLWFTFKRIIKCQPFCNGGYDTVPISIKNSKPLNKKI
What is the function of this protein?
Could be involved in insertion of integral membrane proteins into the membrane.
What are the official names of this protein?
Putative membrane protein insertion efficiency factor.
What is the protein family that this protein belongs to?
Belongs to the UPF0161 family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: RT12_BRANA
Sequence: MPTFNQLIRHGREEKRRTDRTRALDKCPQKLGACLRVSTRTPKKPNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSQVLIRGGRVKDLPGVKFHCIRGVKDLMGIPGRRRGRSKYGAEKPKSI
What is the function of this protein?
Protein S12 is involved in the translation initiation step.
What are the official names of this protein?
Ribosomal protein S12, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: PLPK1_ARATH
Sequence: MALMKKSLSAALLSSPLLIICLIALLADPFSVGARRLLEDPKPEIPKLPELPKFEVPKLPEFPKPELPKLPEFPKPELPKIPEIPKPELPKVPEIPKPEETKLPDIPKLELPKFPEIPKPELPKMPEIPKPELPKVPEIQKPELPKMPEIPKPELPKFPEIPKPDLPKFPENSKPEVPKLMETEKPEAPKVPEIPKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQKPELPKVPEVPKPELPTVPEVPKSEAPKFPEIPKPELPKIPEVPKPELPKVPEITKPAVPEIPKPELPTMPQLPKLPEFPKVPGTP
What is the function of this protein?
Positive regulator of germination and plant growth.
What are the official names of this protein?
Protein PELPK1, Proline-rich protein 10, Protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1.
What are the subcellular locations of this protein?
Secreted, cell wall.
Protein: IF2_CLOPE
Sequence: MSKIRVYELAKELRVPSKVLINVLMDEFGVEVKNHMSVIEDEDAALIKELLAGSEANSELVAEYEAELAEEVNNAAKKKKKRKKGSEDDNLEQDVEVIEIGKTITVKELAEKLNKPVNDVIKTLIFTGVMAAINQEIDFETAEKVAEKYEVAVYEKEEENTLEEFEEETDVEEENLAKRPPIITVMGHVDHGKTSLLDAIRKSKVTSTEAGGITQHIGAYTVEVNGETLTFLDTPGHEAFTAMRARGAQITDVVILVVAADDGIMPQTVEAINHCKAANVPMIVAINKMDREGANPDRVKQELTEHGLVVEDWGGDIIAVPVSAKTRENIDTLLEMVLLTSEMQELKADAGRKAKGTVVEAKLDKGRGAVATLLVQNGTLHMGDSIIVGSTYGRIRAMFDDSGKKIKSAGPSIPVEVLGLSEVPAAGDRFTVVKDEKTARNMAEARKEKIRQESFATSHRVSLEDLYSQIKEGSVKELSVIVKADVQGSVEAIKASLEKLSTDDVKVRVIHGAVGAISETDITLAAASNAIVIGFNVRPDNNAVAASERDGVEVKTYRVIYDAIEDIKSAMIGMLDPEYKEVVLGTAEIRATYKISNVGTIAGGYVLTGKLVRNADVRVIREGIVIFESKLASLKRFKDDVKEVNAGYECGFSVEKFNDIKEGDIIEAYTMEAVQRKEL
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
What are the official names of this protein?
Translation initiation factor IF-2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MINE_NOSS1
Sequence: MILELLDKLFLRTPDTSRSHVKRRLQLVIAHDRAGLDPETLEKMRKEILDIVCRYVEVEPDGLEFALESNQRTTALIANLPIRRVKPELPIFDETSQ
What is the function of this protein?
Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites.  This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
What are the official names of this protein?
Cell division topological specificity factor.
What is the protein family that this protein belongs to?
Belongs to the MinE family.
Protein: Y1936_BACCR
Sequence: MRDNTIGSLIWLRLIRFTNQSNQLSNEFLKRFDLTTAQFDVLLQIRTYQPLTQMELAEKVTVTQGGISRMLTRLEKEGYIVRKQDWKTKTISLTEQGEAALERALPEQLAFQSSFFDDVLNEEEQKILYELMTKVHKHSEKKELPQE
What are the official names of this protein?
Uncharacterized HTH-type transcriptional regulator BC_1936.
Protein: HMDH2_SOLTU
Sequence: MDVRRRSEKPVYPSKVFGADEKPLKPHNNQQQEDNNTLLIDASDALPLPLYLTNGLFFTMFFSVMYFLLSRWREKIRNSTPLHVVTLSELGAIVSLIASVIYLLGFFGIGFVQTFVSRGNNDSWDENDEEFLLKEDSRCGPATTLGCAIPAPPARQISPMAPPQPAMSMVEKPSPLITPASSEEDEEIINSVVQGKFPSYSLVIQLGDVSAAASLRKEVMQRITGKSLEGLPLEGFTYESILGQCCEMPIGYVQIPVGIAGPLLLNGKEFSVPMATTEGCLVASTNRGCKAIYASGGATCIVLRDGMTRAPCVRFGTAKRAAELKFFVEDPIKFETLANVFNQSSRFGRLQRIQCAIAGKNLYMRFVCSTGDAMGMNMVSKGVQNVLDYLQNEYPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIITEEVVKKVLKTEVAALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVFIATGQDPAQNIESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGANREAPGSNARLLATVVAGSVLAGELSLMSAISAGQLVNSHMKYNRSTKASS
What is the function of this protein?
Catalyzes the synthesis of mevalonate.  The specific precursor of all isoprenoid compounds present in plants.
What are the official names of this protein?
3-hydroxy-3-methylglutaryl-coenzyme A reductase 2, HMG-CoA reductase 2, HMG2.2.
What is the protein family that this protein belongs to?
Belongs to the HMG-CoA reductase family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein.
Protein: SYGB_VIBVY
Sequence: MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTALAEHQADKIVEKRGPAVSAAFDAEGNATKAAQGWARGCGITVDQAERMITDKGEWLLFKQEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTTQFIRPVKTLTMLMGSDLIQGEILGVASDRVIRGHRFMGEREFTIESAEQYPAILEERGKVMADYEMRKAIILADAQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFPVYTEDKQLLPNFIFVSNIESKEPRYVIEGNEKVVRPRLADAEFFFNTDRKSKLIDRLPMLENAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDDLPSNGVSAAVAMADKLDTIVGIFGIGQAPKGSDPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSHFRELEAAEALAAANKRVGNILAKFDGELAAEIDLALLQEDAEKVLAENVEVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNLFLQIADISLLQK
What are the official names of this protein?
Glycine--tRNA ligase beta subunit, Glycyl-tRNA synthetase beta subunit, GlyRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CRAS2_URTCR
Sequence: GASCDCHPFKGTYWFGTSNCPSGHGYRKKCDSFF
What is the function of this protein?
Peptide with both antimicrobial and neurotoxin activities.  Cationic AMP with antimicrobial activity against both Gram-positive bacteria (B. subtilis) and Gram-negative bacteria (E. coli and S. enterica).  Shows no significant antimicrobial activity against bacteria S. aureus and P. aeruginosa, as well as the fungus C. albicans.  In vivo, induces reversible paralytic activity towards the shrimp P. paucidens.  May act by impairing sodium or potassium channels in the prey.
What are the official names of this protein?
Crassicorin-II, BDS-like antimicrobial peptide, BDS-like AMP.
What is the protein family that this protein belongs to?
Belongs to the sea anemone type 3 (BDS) potassium channel toxin family.
What are the subcellular locations of this protein?
Secreted. Nematocyst.
Protein: RNT_SHEPC
Sequence: MSDICDANKLKHRFRGYFPVVIDVETAGFNSQTDALLEIAVTLLKMDDEGMLGIDKTLHFHIEPFEGANLEPAALAFNGIDPNNPLRGAVSEKEAFLDIFKAVKKAQKAADCHRCIIVAHNAAFDHGFVSKAIERCDLKRSPFHPFATFDTATLAGLAIGHTVLAKACMMAGIPFDNKEAHSALYDTERTAELFCYIVNRWKQLGGWPLLAAAGAQDAESDTEE
What is the function of this protein?
Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang.  Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A).  Also appears to be involved in tRNA biosynthesis.
What are the official names of this protein?
Ribonuclease T, Exoribonuclease T, RNase T.
What is the protein family that this protein belongs to?
Belongs to the RNase T family.
Protein: VF165_ASFWA
Sequence: MANPNKRIMNKKSKQASISSILNFFFFYIMEYFVAVDNETSLGVFTSIEQCEETMKQYPGLHYVVFKYTCPADAENTDVVYLIPSLTLHTPMFVDHCPNRTKQARHVLKKINLVFEEESIENWKVSVNTVFPHVHNRLSAPKLSIDEANEAVEKFLIQAGRLMSL
What are the official names of this protein?
Uncharacterized protein F165R, pF165R.
What is the protein family that this protein belongs to?
Belongs to the asfivirus F165R family.
What are the subcellular locations of this protein?
Host membrane; Single-pass membrane protein.
Protein: RL28B_MYCTO
Sequence: MSAHCQVTGRKPGFGNTVSHSHRRSRRRWSPNIQQRTYYLPSEGRRIRLRVSTKGIKVIDRDGIEAVVARLRRQGQRI
What are the official names of this protein?
50S ribosomal protein L28-2.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL28 family.
Protein: ARNB_SALPA
Sequence: MLDFLPFSRPAMGAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQ
What is the function of this protein?
Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N).  The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
What are the official names of this protein?
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase, UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase, UDP-Ara4O aminotransferase, UDP-4-amino-4-deoxy-L-arabinose aminotransferase.
What is the protein family that this protein belongs to?
Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.
Protein: ALST_TAMSI
Sequence: MPSSISWGLLLLAALSCLGPGSLAQDAQETEASKQDQEHPASHRIAPHLAEFALSFYRVLARQSNTTNIFFSPVSIATALAMLSLGTKGDTHTQILEGLDFNLTEMAEADIHQGFQNLLQTLNRPNTQLQLTSGNGLFIDRNLKLLDKFLEDVKSLYHSEAFSTNFTNTQEARQQINSYVEKGTQGKIVELLKELDRDTVLALVNYIFFKGKWKQPFNEEQTREKDFHVDEATTVRVPMMNRLGMFHLHHCSTLASWVLQMDYLGNATAIFLLPDKGKMQHLEDTVTTEILTKFLKNRQTTKSQLYFPKVSISGTYDLKDVLSSLGITKVFSSEADLSGVTEEAPLSVSKALHKAVLDIDEEGTEAAGGTVLGNIRSTLRYEVIFDRPFLVVIYEHHTKSPLFVGKVVNPTQQ
What are the official names of this protein?
Alpha-1-antitrypsin-like protein CM55-ST.
What is the protein family that this protein belongs to?
Belongs to the serpin family.
Protein: TAF4_HUMAN
Sequence: MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPPTSQATTALTAVVLSSSVQRTAGKTAATVTSALQPPVLSLTQPTQVGVGKQGQPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNPLQPVPVVKPAVLPGTKALSAVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLQAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCPGPGSGAEGSGPGSVVPGSSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
What is the function of this protein?
The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription (PubMed:33795473).  TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) (PubMed:33795473).  The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 (PubMed:33795473, PubMed:10594036, PubMed:8942982).  TAF4 may maintain an association between the TFIID and TFIIA complexes, while bound to the promoter, together with TBP, during PIC assembly (PubMed:33795473).  Potentiates transcriptional activation by the AF-2S of the retinoic acid, vitamin D3 and thyroid hormone (PubMed:9192867).
What are the official names of this protein?
Transcription initiation factor TFIID subunit 4, RNA polymerase II TBP-associated factor subunit C, TBP-associated factor 4, Transcription initiation factor TFIID 130 kDa subunit, TAF(II)130, TAFII-130, TAFII130, Transcription initiation factor TFIID 135 kDa subunit, TAF(II)135, TAFII-135, TAFII135.
What is the protein family that this protein belongs to?
Belongs to the TAF4 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: NLRC4_MOUSE
Sequence: MNFIRNNRRALIQRMGLTVTKQICDDLFALNVLNNQEANVIYCEPLEQEAARKIIHMTMQKGSAACNLFLKSLENWDYFVYQDLTGQNLSYQVTEEDLNVLAQNLKDLYNSPAFLNFYPLGEDIDIIFNLEKTFTEPIMWKKDHRHHRVEQLTLGSLLEALKSPCLIEGESGKGKSTLLQRIAMLWASGGCRALKGFRLVFFIHLRSARGGLFETLYDQLLNIPDFISKPTFKALLLKLHKEVLFLLDGYNEFHPQNCPEIEALIKENHRFKNMVIVTTTTECLRHIRHVGALTAEVGDMTEDSAKDLIEAVLVPDQVERLWAQIQESRCLRNLMKTPLFVVITCAIQMGRQEFQAHTQTMLFQTFYDLLIQKNSHRYRGGASGDFARSLDYCGDLALEGVFAHKFDFEPEHGSSMNEDVLVTIGLLCKYTAQRLKPTYKFFHKSFQEYTAGRRLSSLLTSKEPEEVSKGNSYLNKMVSISDITSLYGNLLLYTCGSSTEATRAVMRHLAMVYQHGSLQGLSVTKRPLWRQESIQSLRNTTEQDVLKAINVNSFVECGINLFSESMSKSDLSQEFEAFFQGKSLYINSENIPDYLFDFFEYLPNCASALDFVKLDFYERATESQDKAEENVPGVHTEGPSETYIPPRAVSLFFNWKQEFKTLEVTLRDINKLNKQDIKYLGKIFSSATNLRLHIKRCAAMAGRLSSVLRTCKNMHTLMVEASPLTTDDEQYITSVTGLQNLSIHRLHTQQLPGGLIDSLGNLKNLERLILDDIRMNEEDAKNLAEGLRSLKKMRLLHLTHLSDIGEGMDYIVKSLSEESCDLQEMKLVACCLTANSVKVLAQNLHNLIKLSILDISENYLEKDGNEALQELIGRLGVLGELTTLMLPWCWDVHTSLPKLLKQLEGTPGLAKLGLKNWRLRDEEIKSLGEFLEMNPLRDLQQLDLAGHCVSSDGWLYFMNVFENLKQLVFFDFSTEEFLPDAALVRKLSQVLSKLTLLQEVKLTGWEFDDYDISAIKGTFKLVTA
What is the function of this protein?
Key component of inflammasomes that indirectly senses specific proteins from pathogenic bacteria and fungi and responds by assembling an inflammasome complex that promotes caspase-1 activation, cytokine production and macrophage pyroptosis.  The NLRC4 inflammasome is activated as part of the innate immune response to a range of intracellular bacteria.  It senses pathogenic proteins of the type III secretion system (T3SS) and type IV secretion system (T4SS) such as flagellin and PrgJ-like rod proteins via the Naip proteins (Naip1, Naip2 or Naip5): specific Naip proteins recognize and bind pathogenic proteins, driving assembly and activation of the NLRC4 inflammasome.  The NLRC4 inflammasome senses Gram-negative bacteria such as L. pneumophila and P. aeruginosa, enteric pathogens S. typhimurium (Salmonella) and S. flexneri and fungal pathogen C. albicans.  In intestine, the NLRC4 inflammasome is able to discriminate between commensal and pathogenic bacteria and specifically drives production of interleukin-1 beta (IL1B) in response to infection by Salmonella or P. aeruginosa.  In case of L. pneumophila infection the inflammasome acts by activating caspase-7.
What are the official names of this protein?
NLR family CARD domain-containing protein 4, Caspase recruitment domain-containing protein 12, Ice protease-activating factor, Ipaf.
What are the subcellular locations of this protein?
Cytoplasm, cytosol. Inflammasome.
Protein: TKT_STAAS
Sequence: MFNEKDQLAVDTLRALSIDTIEKANSGHPGLPMGAAPMAYTLWTRHLNFNPQSKDYFNRDRFVLSAGHGSALLYSLLHVSGSLELEELKQFRQWGSKTPGHPEYRHTDGVEVTTGPLGQGFAMSVGLALAEDHLAGKFNKEGYNVVDHYTYVLASDGDLMEGISHEAASFAGHNKLSKLVVLYDSNDISLDGELNKAFSENTKARFEAYGWNYLLVKDGNDLEEIDKAITTAKSQEGPTIIEVKTTIGFGSPNKAGTNGVHGAPLGEVERKLTFENYGLDPEKRFNVSEEVYEIFQNTMLKRANEDESQWNSLLEKYAETYPELAEEFKLAISGKLPKNYKDELPRFELGHNGASRADSGTVIQAISKTVPSFFGGSADLAGSNKSNVNDATDYSSETPEGKNVWFGVREFAMGAAVNGMAAHGGLHPYGATFFVFSDYLKPALRLSSIMGLNATFIFTHDSIAVGEDGPTHEPIEQLAGLRAIPNMNVIRPADGNETRVAWEVALESESTPTSLVLTRQNLPVLDVPEDVVEEGVRKGAYTVYGSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENILNQVMSL
What is the function of this protein?
Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
What are the official names of this protein?
Transketolase, TK.
What is the protein family that this protein belongs to?
Belongs to the transketolase family.
Protein: CAPSD_PLRVW
Sequence: MSTVVVKGNVNGGVQQPRRRRRQSLRRRANRVQPVVMVTAPGQPRRRRRRRGGNRRSRRTGVPRGRGSSETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGILKAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNQFQIPQGGAKTYQARMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNPK
What is the function of this protein?
Major capsid protein that self-assembles to form an icosahedral capsid with a T=3 symmetry, about 23 nm in diameter, and consisting of 180 capsid proteins monomers.  Most of the 180 monomers are the major capsid protein, but a small percentage contain the minor capsid protein, which has a long C-terminal extension.
What are the official names of this protein?
Major capsid protein, Coat protein, CP, P3.
What is the protein family that this protein belongs to?
Belongs to the luteoviruses capsid protein family.
What are the subcellular locations of this protein?
Virion.
Protein: YR013_MIMIV
Sequence: MEYLNLYKHLKKFIDSENEIIIDISENYPGLRFDINNKSGINLMIALADLSYVINHANQLKYANLLSQFRYNLFLDLKFLNNELKCNEFIDNIINQIPNNIQDYLLEFKNKNYSTDELSYIDNCDLKLKLMKKSFDEIASLSTHSQSVIELYCRIIYNDPSSFDFSVNGITLPNLKKFSNDFL
What are the official names of this protein?
Uncharacterized protein R13.
Protein: ASSY_PSEP1
Sequence: MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKKKSPYSMDANLLHISYEGGVLEDTWTEHEEDMWRWSVSPENAPDQATYIELTYRNGDIVAIDGVEKSPATVLADLNRIGGANGIGRLDIVENRYVGMKSRGCYETPGGTIMLKAHRAIESITLDREVAHLKDELMPKYASLIYTGYWWSPERLMLQQMIDASQVNVNGVVRLKLYKGNVTVVGRKSDDSLFDANIATFEEDGGAYNQADAAGFIKLNALRMRIAANKGRSLL
What are the official names of this protein?
Argininosuccinate synthase, Citrulline--aspartate ligase.
What is the protein family that this protein belongs to?
Belongs to the argininosuccinate synthase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LDCI_SALTI
Sequence: MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLKLIENNSRLCGVIFDWDKYNLELCEEISKLNEYMPLYAFANSYSTLDVSLNDLRMQVRFFEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKKTLDVKSIHFDSAWVPYTNFSPIYQGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNIDNEHMYLDPIKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAFDLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPKMVMTPYTAFQKELHGETEEVYLEEMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKENTK
What are the official names of this protein?
Inducible lysine decarboxylase, LDC.
What is the protein family that this protein belongs to?
Belongs to the Orn/Lys/Arg decarboxylase class-I family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DAGK_STAA2
Sequence: MRKRARIIYNPTSGKELFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE
What is the function of this protein?
Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid.  Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthetic pathway.
What are the official names of this protein?
Diacylglycerol kinase, DAG kinase, DAGK.
What is the protein family that this protein belongs to?
Belongs to the diacylglycerol/lipid kinase family.
Protein: GCSP_MYCBT
Sequence: MSDHSTFADRHIGLDSQAVATMLAVIGVDSLDDLAVKAVPAGILDTLTDTGAAPGLDSLPPAASEAEALAELRALADANTVAVSMIGQGYYDTHTPPVLLRNIIENPAWYTAYTPYQPEISQGRLEALLNFQTLVTDLTGLEIANASMLDEGTAAAEAMTLMHRAARGPVKRVVVDADVFTQTAAVLATRAKPLGIEIVTADLRAGLPDGEFFGAIAQLPGASGRITDWSALVQQAHDRGALVAVGADLLALTLIAPPGEIGADVAFGTTQRFGVPMGFGGPHAGYLAVHAKHARQLPGRLVGVSVDSDGTPAYRLALQTREQHIRRDKATSNICTAQVLLAVLAAMYASYHGAGGLTAIARRVHAHAEAIAGALGDALVHDKYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFGVAAAAPAHADIATRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEFGRQHPFAPASDTAGLRQLVADLQSWLVLITGYDAVSLQPNAGSQGEYAGLLAIHEYHASRGEPHRDICLIPSSAHGTNAASAALAGMRVVVVDCHDNGDVDLDDLRAKVGEHAERLSALMITYPSTHGVYEHDIAEICAAVHDAGGQVYVDGANLNALVGLARPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPFLPGHPFAPELPKGYPVSSAPYGSASILPITWAYIRMMGAEGLRAASLTAITSANYIARRLDEYYPVLYTGENGMVAHECILDLRGITKLTGITVDDVAKRLADYGFHAPTMSFPVAGTLMVEPTESESLAEVDAFCEAMIGIRAEIDKVGAGEWPVDDNPLRGAPHTAQCLLASDWDHPYTREQAAYPLGTAFRPKVWPAVRRIDGAYGDRNLVCSCPPVEAFA
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Glycine dehydrogenase (decarboxylating), Glycine cleavage system P-protein, Glycine decarboxylase, Glycine dehydrogenase (aminomethyl-transferring).
What is the protein family that this protein belongs to?
Belongs to the GcvP family.
Protein: PAN2_KLULA
Sequence: MNNWQLSYQSPEDLTYHLKKPYLQYDKKEKQVTKVVFDTEANLIWAGDSYGRVSSYDPTYSLYTRHTAHIGSMPVVDLLSNKNGILSLSSDSLHFSNRRGVTQMSLTSADIAQLSDMKTMCYYTNNQNQVLCAGGNTASGIISVDLIKGTLASSTYFTSKVKHMSSNNKLVAIGKQAGSIDLFDPVSNRVIHSLSGHSASITSMDFKDNTLVTAGKSKTFGYLQSDQFINVYDVRIMKQLPPISFSKTPNFVGNHTSSKFPIGADFLQLHPVLPTVVAVASSSGSFDFIDLVNPSLRTPYIHPCKSISQFTLSPSGDYLAFLEEESMINMWNRSNSMSGFTNSAAVLEYQDYPEDSFIPYRVEVGQESYPLSSIGLPYYSETLLSAWPHTVFKTEGIISKKIEGSSSSETDNNSTKSVNRSLSHLSSSKYSLQPYNKFKYGPRNVIEPYKSLRERRKKMVSTTEDNQHRKELLEYKPSNNIDIPPAYSKLQMIYGKFGVMDFDFGGFNTTQYSGLETDIDCVYINEIIHLYRFVPEVYNFVVNCLEDEHIQEKSVLTELGFLFDMMTRANGKICRASNFVDVLESISTANELGLFTDEISTVSGHAGKPSLDEGNLSSHIYNLNLSVDADAEEIMKRSYGKYMTVAQKFNIFLLDRLISEEVERKLHSTDAIVLEELFGLNVDTEIHTLSTCGNFVRQPHLVSSLVVLSPASNNVKYSNKKLSNQTILPYIESSMCRFKQLTARCSKCEKLQNQEYESIVRNLPPLLSLNICLSPEEWTTAKTVNGWLSNHFFATISKDRPILKLQATDLKTSNAIFKYELMSYVARITDDFGEEHLVTYAKILDQKIQQYKWYMFNDFLVQEIDEDEALNISYWWKTPEIVVYSDAEEIRKPFVSVSKLKVDTDILYRDYFSEGIRKDVIRQYRLLTKDEAPGPGTLVALDAEFVSLTEPYLEINCKGMKTLLKPAKKSLARVSLLRGEGELEGVPFIDDYIINECHIEDYLTQFSGIEPGDLDPKLSKKSLVKRQVFYRKMWLLLQLGCVFVGHGLTNDFRQINIYVPESQIRDTSLYYLKGKRYLSLRYLAFAVLRKQVQTGNHDSIEDAHTALLLYRKYLELKEKGVFEMYLENIYDEGRKFGFKVPDTI
What is the function of this protein?
Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover.  PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1.  PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex.  Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exonucleolytic degradation by XRN1.  May also be involved in post-transcriptional maturation of mRNA poly(A) tails.
What are the official names of this protein?
PAN2-PAN3 deadenylation complex catalytic subunit PAN2, PAB1P-dependent poly(A)-specific ribonuclease, Poly(A)-nuclease deadenylation complex subunit 2, PAN deadenylation complex subunit 2.
What is the protein family that this protein belongs to?
Belongs to the peptidase C19 family. PAN2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.