PharMolix/UniProtQA huggingface dataset:
Protein: LEUD_PSEA7
Sequence: MKPYTQTTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPGQDNSKRPLNPDFVLNQPRYQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSYADIFFNNSFKNGLLPIILAEAEVDELFRQVEANEGYQLSIDLAAQTVTRPDGKVLGFEVDPFRKHCLLNGLDDIGLTLQDADAIRAFEGGYRQQQPWLFR
What is the function of this protein?
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
What are the official names of this protein?
3-isopropylmalate dehydratase small subunit, Alpha-IPM isomerase, IPMI, Isopropylmalate isomerase.
What is the protein family that this protein belongs to?
Belongs to the LeuD family. LeuD type 1 subfamily.
Protein: GLPB_HAEIG
Sequence: MNFDVAIIGGGLAGLTCGIAIQQRGKRCVIINNGQAAIDFASGSLDLLSRMPSTSNGESRTVENLKENITALRNELPAHPYSLLGAEKVLAKAQDFERLANELHLDLIGSTEKNHWRVTGLGSLRGAWLSPNSVPTVQGNELFPHKRIAVLGIEGYHDFQPQLLAANLVLNPQFEHCEVTSGFLNIPQLDELRKNAREFRSVNISQLLEHKLAFKDLVKEIIESSQGAEAVFLPACFGLENQEFMTALRDATKLALFELPTLPPSLLGMRQRIQLRHKFESLGGLMINGDSALNATFEGNKVRCINTRLLEDEEITADNFVLASGSFFSKGLISEFDKIYEPVFESDIIGVEGFNQKDRFTWTVHRFAHPQPYQSAGVAINAQCQVQKCGQFLTNLYAVGNVIGGFNALELGCGSGVAVVTALAVADEILAK
What is the function of this protein?
Conversion of glycerol 3-phosphate to dihydroxyacetone.  Uses fumarate or nitrate as electron acceptor.
What are the official names of this protein?
Anaerobic glycerol-3-phosphate dehydrogenase subunit B, Anaerobic G-3-P dehydrogenase subunit B, Anaerobic G3Pdhase B.
What is the protein family that this protein belongs to?
Belongs to the anaerobic G-3-P dehydrogenase subunit B family.
Protein: GET3_MAGO7
Sequence: MSTALIDVDSMEPSLQSILDQKSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLISTDPAHNLSDAFSQKFGKEARLIDGFTNLSAMEIDPNGSMQDLLAGQGADEGGAAADGMAGMGGMMQDLAFAIPGIDEAMSFAEVLKQVKSLSYETIIFDTAPTGHTLRFLQFPSVLEKALAKVSQLSSQYGPLLNGFLGGQGQLPNGQSLPEMMEKLEQLRETISEVNTQFKDENLTTFVCVCIAEFLSLYETERMIQELASYNIDTHCIVVNQLLFPKKGSKCDHCDARRRMQKKYLDQIEELYDEFNVVKMPMLIEEVRGKEKLEKFSEMLVKPYVPPEADE
What is the function of this protein?
ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum.  Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol.  This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion.  This process is regulated by ATP binding and hydrolysis.  ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins.  ATP hydrolysis is required for insertion.  Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting.
What are the official names of this protein?
ATPase GET3, Arsenical pump-driving ATPase, Arsenite-stimulated ATPase, Golgi to ER traffic protein 3, Guided entry of tail-anchored proteins 3.
What is the protein family that this protein belongs to?
Belongs to the arsA ATPase family.
What are the subcellular locations of this protein?
Cytoplasm. Endoplasmic reticulum.
Protein: TBL37_ARATH
Sequence: MGFKLNSLFLLLSLLILTILSGADQALAYVKKPHVSQRNKTALAAVAGRGGGKEMLKGRKQTSGCNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTVPRFDGEAFLKKWRGKRVMFVGDSLSLNMWESLACMIHSSVPNTKTTFLKRTPLSSLTFQEYDVTLFLYRTPYLVDISKESVGRVLNLGAIEDGADAWKNMDLLVFNSWHWWTHTGVQSQGWDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQTRVFFQGISPTHYMGREWNEPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVYLLDITTLSQLRKDAHPSTYGGDGGTDCSHWCLPGLPDTWNQLLYAALSM
What is the function of this protein?
May act as a bridging protein that binds pectin and other cell wall polysaccharides.  Probably involved in maintaining esterification of pectins (By similarity).  May be involved in the specific O-acetylation of cell wall polymers (By similarity).
What are the official names of this protein?
Protein trichome birefringence-like 37.
What is the protein family that this protein belongs to?
Belongs to the PC-esterase family. TBL subfamily.
What are the subcellular locations of this protein?
Membrane; Single-pass type II membrane protein.
Protein: ADDB_STREM
Sequence: MKLLYTEISYSMTEILVKEARAYADKGYRVFYIAPNSLSFEKERSVLALLPEQGSFAITVTRFEQMARYFTLAKAANRQALDDNGLAMIFYRVLMQLQEDELKVFHRLRTDQAFIAQLVELYKELQAANLTAFDLTTLDRPEKQEDLITIMTKAEQLIAQGDYDQSSRLAQLAEAIKSKSLDDELRQTVLVIDGFTRFSAEEEQLLALLNEACEEIVIGAYISQKAYRLAFTKGNLYEASLAFIQQLAQQFQTKPIYTTSEKVFDVSFSRLTQLLEANHDYSQLDWQLSAKDKSKVVIWQALNQKEELEHVTKAIREKLYQGYRYKDMLVLLGDVASYQLQIGPIFEKFEIPYYIGKQEPMSAHPLVQFVESLERGRRYNWRREDIVNLLKSGLFGRFQEGELDQLEQYLVFADIQGFTKFSRPFTLNSSRQYPLPLLNQLRLAVVTPLQQLFKSQKQLGASLLDKLMTFFKTIQLADNFEALAGSRREADREKDEEVWKTFTGILETFYQVFGQEKMTLADCLALIKMGMQTAHYRTVPATLDVVSIKSYDLVEPHSKPFVFAIGLSRSHFPKQTKNTSLISDQERASINEQTASYQRLDVPSFENIKKNHQTALSLFNAATQELVLSLPTSLTNSSDDVSPYLKELIALGVPVIEKGKNRLSHSAADIGNYKALLSRLVAINRQGIADDMTSEDRNFWTVALRYLKRRLADEQLSLPAFEHHLTTKPVAPEVIETRFPSQQPLSLSSSALTVFYNNQYKYFLKYVLGLQEPESIHPDARIHGQYLHRIFELVTKDRSNAAFDQKLGAAIAAVNQQSAFQQVYQADAEGRYSLEVLKGIAYSTAPVLNLNQGMQVAKQEEAFELALGHQALIRGVIDRIDQLADGRLGIVDYKSSARVFDIGAFYNGLSPQLVTYLAALKNKGQGLFGAMYLHMQEPRLSLSDFKVLDDQLVAAAYKELTYKGIFLAQAKEYLANGSYHLNNTLYETDELETLLAYNEQLYLSAVKQIKTGHFLINPYTADGKSVQGDQLKAITRFEADLDLGYARRLVVLPAKERRQAFLTRMNEEIKHED
What is the function of this protein?
The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease.  Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination.  This subunit has 5' -> 3' nuclease activity.
What are the official names of this protein?
ATP-dependent helicase/deoxyribonuclease subunit B, ATP-dependent helicase/nuclease RexB.
What is the protein family that this protein belongs to?
Belongs to the helicase family. AddB/RexB type 2 subfamily.
Protein: RS13_NATPD
Sequence: MSTEEPQADEEDEDLQYFVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAVEEYGDEVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVRGQRTKSTGRTEGTIGVNVEAIKEEQAEDGGDEE
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: MATK_LIQOR
Sequence: MEESQGYLELYKSGQHDFLYPLIFQEYIYVLAHDHGLNRSILLENLGSDNKFSSLIVKRLITRMYQQNRLIISANDSNQNPFLGHNKDLYSQIISEGFAVIVEIPFPLRLVSSLERKEIVKSHNLRSIHSVFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNSLINPKKSIFVFSKRNQRLFLFLYNSHVYEYESVFVFLRNQSSHLRSTSSGALLERIYFYGKIKHLVEVFANDFQAILWLFKDTFVHYVRYQGKSILASKGTPLLMNKWKYYLVNFWQCNFYVWSQPVRIYINQLSNHSLYFLGYISSVGLNPSVVRNQMLENSFIIDNAIKKFDIIVPIIPLIGSLAKAKFCNVLGHPISKPARADSSDSDIIDRFVRICRNLSHYHSGSSKKKSLYRIKYILRLSCARTLARKHKSPVRAFLKRLGSELLEEFLTEEEQVLSLIVPASSTSRRLYRGRIWYLDIICINDLANHE
What is the function of this protein?
Usually encoded in the trnK tRNA gene intron.  Probably assists in splicing its own and other chloroplast group II introns.
What are the official names of this protein?
Maturase K, Intron maturase.
What is the protein family that this protein belongs to?
Belongs to the intron maturase 2 family. MatK subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: NDUF3_BOVIN
Sequence: MAAAFVLRNLYRARPALRSPPSELPWAPRRGHRLTPADDELYQRTRISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLFWMLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAALIPPPGGTALTSQAQAAE
What is the function of this protein?
Essential factor for the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
What are the official names of this protein?
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.
What are the subcellular locations of this protein?
Nucleus. Mitochondrion inner membrane.
Protein: VSAC_TRYBB
Sequence: LHPQQALAQTAGRPLADVVGKTLCTYSKTAKRQAANLAQTLQRASSAAKQSRQAQQLAALALAKLPDYKEAAATLLIYATHKIQDAQASIENWTGENTKLVGQAMYSSGRIDELMLLLEGHREDGANGQDKTCLGAAAGGNTVNEFVKTECDTESGHNIEADNSNIGQAATTLSQESTDPEASGGASCKITANLATDYDSHANELPLLGGLLTIHNAGGFKTGQSLQTAAPTNKLISALKNKGAGVAAKLATVTSAAPTSKQELKTLLASKGERAKLQAANDEYNNWKPGAKPEDFDAHIKKVFGAEDGKDSAYALALEGISIEVPQKPGTTESKQLYSMQPKDLMAALIGTIAEIQKAAATKAPCPKHKLTSAESDALCSKIKDANECNSKPFCSYNSTETDTAKKCQFNETKADKSGVSLPKTGPTGTEATTDKCKDKTKDECKSPNCKWEGETCKDSSILVTKKFALSLVSAAFASLLF
What is the function of this protein?
VSG forms a coat on the surface of the parasite.  The trypanosome evades the immune response of the host by expressing a series of antigenically distinct VSGs from an estimated 1000 VSG genes.
What are the official names of this protein?
Variant surface glycoprotein ANTAT 1.1C, VSG.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor, GPI-anchor. Note=A soluble form is released from ruptured cells by the action of a PI-PLC.
Protein: RL11_CLOAB
Sequence: MAKKVVGLIKLQLPAGKATPAPPVGPALGQHGVNIMAFCKEYNAKTANQAGFTIPVVITVYQDRSFSFILKTPPAAVLIKKAAGIESGSGVPNKNKVGKITKEQVKEIAQTKMPDLNAASLEAAMSMIAGTARSMGVEVVD
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL11 family.
Protein: RNC_STAAN
Sequence: MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAESAYKQLKQIK
What is the function of this protein?
Digests double-stranded RNA.  Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S).  Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon.  Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
What are the official names of this protein?
Ribonuclease 3, Ribonuclease III, RNase III.
What is the protein family that this protein belongs to?
Belongs to the ribonuclease III family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HSLO_STRU0
Sequence: MDKIIKSISETGSFRAFVLDSTQTVKTAQEKHQTLSSSTVALGRTLIANQILAANQKGDSKITVKVIGDSSFGHIISVADTKGHVKGYIQNTGVDIKKTATGEVLVGPFMGNGHFVTIIDYGTGNPYTSTTPLITGEIGEDFAYYLTESEQTPSAVGLNVLLDEEDKVKVAGGFMVQALPGASEEEIARYEKRLQEMPAISTLLAAEDPSDALLSAIYGDEGYKRLSEDSLSFQCDCSKDRFESALMSLPNTDLQDMIDQDHGAEIICQFCQTRYQFSEDDLKGIINDKA
What is the function of this protein?
Redox regulated molecular chaperone.  Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation.  Plays an important role in the bacterial defense system toward oxidative stress.
What are the official names of this protein?
33 kDa chaperonin, Heat shock protein 33 homolog, HSP33.
What is the protein family that this protein belongs to?
Belongs to the HSP33 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ARLY_SYNS9
Sequence: MAGGVTGGADGTWSDRFEQGLHPFIEVFNASIGFDLTLLQEDLDGSIAHARMLGSCGVISVEEAEQLVQGLETIRSEAHAGTFQPGLADEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRLDELEGDLQRLQRALVAQADLHRRTMIPGYTHLQRAQPLCLAHHLLAYVEMLERDRLRLHDVRSRVNICPLGAAALAGTPVPIDRQQTAKALGFDAIYANSLDAVSDRDFCVEFSAAASLVMAHLSRLAEEVIAWASEEFRFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKGLPLAYNKDFQEDKEALFDAFRTTRDCIEAMAILFEEGLEFRTERLNTAVEQDFSNATDVADYLVAKGVPFREAYQLVGAVVRRCLDEGCLLRDLSLAAWQELHPAFEADLHDALAPQAVVAARRSEGGTGFDRVDEQLGRWLQHLNGTQPVG
What are the official names of this protein?
Argininosuccinate lyase, ASAL, Arginosuccinase.
What is the protein family that this protein belongs to?
Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y929_HAEIN
Sequence: MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHSMCLDFAADEIKKGDYENYHFTELQKQLIETSWRNQEPYLYGRFDFGYDGNNLKMFEYNADTPTSLLEAAVVQWQWLEQIEGLKHRDQFNWIHEELIKHFQFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLAVEDIGYNSETKKFVDLNDQPIEMLFKLYPLEWLSHAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPHLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNNGVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
What is the function of this protein?
May be a ligase forming an amide bond.  Shows ATPase activity (By similarity).
What are the official names of this protein?
Putative acid--amine ligase HI_0929.
What is the protein family that this protein belongs to?
Belongs to the glutathionylspermidine synthase preATP-grasp family.
Protein: SYFA_FRATM
Sequence: MQIVEQMKDKALAELNLVKDKKTLDDIRVKYLGKKGELTEMMKLIATLPNDEKPKLGQAVNIAKQALQEAINLKLANFEEQELNEKLAQEKIDITLTGVGQNQGSLHPVTKTLNRIEAFFKQNGFAIEFGPEIESDYYNFETLNIPSHHPARAMHDTFYIDETHVLRTHTSGVQIRTMEKQQPPIRIIAPGRVYRCDSDITHTPMFHQVEGLLVDKDVSFADLKGLLHAFLNSFFEKDLKVRFRPSYFPFTEPSAEADIECVMCDGKGCRVCKHTGWLEVLGCGMVHPKVLKAGNIDSEKYQGFAFGMGVERLSMLRYGIDDLRMFFENDLRFLKQF
What are the official names of this protein?
Phenylalanine--tRNA ligase alpha subunit, Phenylalanyl-tRNA synthetase alpha subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RK33_WELMI
Sequence: MPAKTGPRVVVFLECFHCTQKGAQKKFPGVFRYITKKNRHNKSTPLELKKFCPFCLKHTIHKERKK
What are the official names of this protein?
50S ribosomal protein L33, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: CDPD1_VIBCH
Sequence: MTIWVLSLAMKNTIYHAPLTFGLYALAGVLFALYTSRVCPFLATLSTREIATQVGAVFILAWLIRHTLLRQHIWARKQQFIQLDTALLFAMSLPLALYYNLQYQFTLDSNLKVLFGMTLFGFFTGALLQLSSKLRTLRQMPQSQNLALSSDERRSLVKQLIGLIVLLISTLTVMLSMVAIKDIHWLENNPARLLDGSGKISIVKEFAFLSLVLGGYITAILVLWSRMMKEILDHQERSLQAVTQGNLQVRLPVYSNDELGNVAMLTNQMLDSLEATQNEVKTTRDVAIVSLSALAESRDNETGAHILRTQEYVKALAEYLAAFPQYSTLLTPAYIELLYKSAPLHDVGKVGIPDSVLLKPGKLTDEEFTVMKEHPRIGAQALAIAERHLGTSSFLAIAKEIALTHHEKWDGTGYPAQLQGEAIPLSGRLMALADVYDALISARVYKPAFSHDKAKAIIVEGSGHHFDPAVVEAFLAVEEKFVAIAAHFKDAA
What is the function of this protein?
Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP in vitro.  Increases motility and decreases biofilm formation in vivo.
What are the official names of this protein?
Cyclic di-GMP phosphodiesterase VC_1295.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: PSTB_THEKO
Sequence: MNFAIETVNLNVYYGQNHVIKDVDLKIPNKGVFALMGPSGCGKSTMLRTFNRLIELNEDARVEGEVRLFGENIYSEDVDPIEVRKKVGMVFQYPNPFPHLTIYDNVAIGLKLNGLVKSREELDERVEWALKKAALWDEVKDRLNDYPGNLSGGQRQRLVIARALAMKPEVLLMDEPTANIDPVGTAKIEELLLELKEDYTIVLVTHSPAQAARVADYVAFLYLGELIEVGPARKVFENPEHELTEKYVTGALG
What is the function of this protein?
Part of the ABC transporter complex PstSACB involved in phosphate import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Phosphate import ATP-binding protein PstB, ABC phosphate transporter, Phosphate-transporting ATPase.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: CA1_CONST
Sequence: MGMRMMFTVFLLVVLATTVVSFPSDRASDGRDDEAKDERSDMHESDRKEICCNPACGPKYSCGR
What is the function of this protein?
Alpha-conotoxins act on postsynaptic membranes, they bind to the nicotinic acetylcholine receptors (nAChR) and thus inhibit them (PubMed:3196703).  Is active on muscle nAChR (IC(50)=113 nM on adult subtype (alpha-1-beta-1-gamma-delta/CHRNA1-CHRNB1-CHRNG-CHRND) and IC(50)=142 nM on fetal subtype (alpha-1-beta-1-delta-epsilon/CHRNA1-CHRNB1-CHRND-CHRNE)) (PubMed:9174364, PubMed:35357806).  On mice muscle receptors, its higher affinity site is the alpha/delta nAChR subunit interface (PubMed:9174364).  On Torpedo receptors, it does not distinguish between alpha/delta and alpha/gamma acetylcholine-binding sites (PubMed:9174364).  In vivo, causes paralysis followed by death when injected into goldfish (PubMed:3196703).  In contrast, has no effect on mice, when similar doses are intraperitoneally or intracerebrally injected (PubMed:3196703).
What are the official names of this protein?
Alpha-conotoxin SI.
What is the protein family that this protein belongs to?
Belongs to the conotoxin A superfamily.
Protein: RS11_BURO1
Sequence: MAKASNTAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGSRKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTPIPHNGCRPPKRRRI
What is the function of this protein?
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA.  Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
What are the official names of this protein?
30S ribosomal protein S11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS11 family.
Protein: KDSA_CUPNH
Sequence: MKLCGFEAGLDKPFFLIAGPCVIESEQMALDTAGELKAITAELGIPFIYKSSFDKANRSSGKSFRGLGMEKGLEILATVKREIGVPVLTDIHEIDEIKPVAAVVDVLQTPAFLCRQTDFIRACAQSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLPDDVFMACERGVSFGYNNLVSDMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREFVPVLSRAAVATGVAGLFMETHPDPSKAMSDGPNAVPLSRMKELLAVLKELDTLVKRAGFLEDNFGWPACA
What are the official names of this protein?
2-dehydro-3-deoxyphosphooctonate aldolase, 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase, KDO-8-phosphate synthase, KDO 8-P synthase, KDOPS, Phospho-2-dehydro-3-deoxyoctonate aldolase.
What is the protein family that this protein belongs to?
Belongs to the KdsA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: G1095_PHOV8
Sequence: MRTFKSLMISLCMGTTLCMCLPQTTTAQTVSSGDSWTWDKGTIVIDTPERPTGQKSVLGLTTPKMEVVRVGFVGLGMRGPGAVERFTYIPGTQIVALCDYEASRAEKCQDILKKASMPKAAIYSGEKGYEELCKRTDIDLVYIAADWLHHFPVAKCALENGKNVAIEVPSAMNLQECWDLINLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDHYWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDRITTLVAMDTKSVVGKDLVEKRTGEECKEFRNGDHTTTLLRTANGKVIEIQHNVMTPQPYNRLYQLTGSKGFANKYPVEGYALDAAQLTASGVQPKVDDLNSHGFLPQAEMEALVEKYQHPILKKYGEMAKEVGGHGGMDFIMDSRLVYCLQNGLPLDMDVYDLAEWCCLAELGAISMDNGCAAVAFPDFTRGEWNVTKGYKHAYASPEDENANMEKAKAFTAKLKEQGAKEWAKEAKKKKK
What is the function of this protein?
Glycosidase.
What are the official names of this protein?
Glycosyl hydrolase family 109 protein 5.
What is the protein family that this protein belongs to?
Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.
Protein: SYFA_STRP8
Sequence: MDLQAQLEELKTKTLETLQSLTGNHTKELQDLRVAVLGKKGSLTELLKGLKDLSNDLRPVVGKQVNEVRDLLTKAFEEQAKIVEAAKIQAQLDAESIDVTLPGRQMTLGHRHVLTQTSEEIEDIFLGMGFQIVDGFEVEKDYYNFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTLDQHDFSKGPLKMVSPGRVFRRDTDDATHSHQFHQIEGLVVGKNISMRDLKGTLEMIIKKMFGEERSIRLRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPSVLEMSGVDAKEYSGFAFGLGQERIAMLRYGINDIRGFYQGDQRFSEQFN
What are the official names of this protein?
Phenylalanine--tRNA ligase alpha subunit, Phenylalanyl-tRNA synthetase alpha subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMH_ELUMP
Sequence: MNNWTHIPVLTKEIGQMLITDINGVYIDGTLGLGGHTKYLLGLLGKEAKIIGFDKDYNAVKMAEANVADGRLTAINLSYEAAPKVLKDLKIQGGADGVLLDLGLSSYQLDDASRGFSFMGGGPLDMRFDISGQKTAADVVNSYTAEELERIFANYGEETNARNAAAAIVRARVDKKIKTTSELANILAPVLPRRGKTHGATRVFQALRIEVNDELGTVERFIKVLPEVLKPGGRAAVITFHSLEDRIVKNIFKQMSAEGEVKLVNKHVIEPEWEEVKNNRRSRSAKLRVAEKI
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: D10_FOWPN
Sequence: MGEYYKNKLLLRPSVYSDNIQKIKLVAYEYGKLHAKYPLSVIGIMKTIDDKFVLCHRYNSFLFSEIAFTKDKRRKIRLFKKYSKYMSNIERDILSYKLSLPNNYNTNHIDIIFPGGKIKDLESITNCLVREIKEELNIDSSYLAICKNCFVYGSIYDRLIDKDFEVIALYVETDLTSRQILNRFIPNREIKGISFIDARDINKDYLYTNVIKYIINAVRTSASNS
What is the function of this protein?
Decapping enzyme required for the removal of the 5'-end m7GpppN cap tethered to viral and host mRNAs to allow their decay in cells.  May therefore accelerate viral and cellular mRNA turnover to eliminate competing host mRNAs and allow stage-specific synthesis of viral proteins.  Acceleration of the turnover of cellular transcripts may even promote the shutoff of host protein synthesis (By similarity).
What are the official names of this protein?
mRNA-decapping protein D10.
What is the protein family that this protein belongs to?
Belongs to the Nudix hydrolase family.
Protein: GORAB_DANRE
Sequence: MAAWAGFSEEELRKLQHNGEVANQAVSVTLGRGRKPAQTNRSRQQLQRERALQLAAKQKEISQSLLPDQQLTRPPEPPASSHPAPPAETPDEQSVPVKHEAEPVKPDPASPVQSIPPADFKELDKQEVELREKNRLQQLQWEQRIMEEKNKKRKALLTKTIAEKSKQTQAEAIKLKKIQRELQVLDDSVSSDIGVLRKLIEQSSMDYSLAWKRFEKAEAEYVAAKMDLHRKTEVKEQLTEHLCAIIQQNELRKARKLEELMLQLELNAEEVPSPDQTQLQDKQKEPVTENGPAAELERCTEANGSSMSKDSSITETKISQDNQESEAADVSADGLR
What are the official names of this protein?
RAB6-interacting golgin, N-terminal kinase-like-binding protein 1, NTKL-BP1, NTKL-binding protein 1, SCY1-like 1-binding protein 1, SCYL1-BP1, SCYL1-binding protein 1.
What is the protein family that this protein belongs to?
Belongs to the GORAB family.
What are the subcellular locations of this protein?
Cytoplasm. Golgi apparatus.
Protein: DDL_STRCO
Sequence: MSTENLPQNPEQSPRRPPRKPRVAVVFGGRSSEHGISVVTAGAVLAAIDRTRYDVLPIGITRDGRWALTADEPERMAITERRTPDVEELAESTEGGVLLPVDPANREVVYSEPGSVPKALGEVDVVFPVLHGPYGEDGTLQGLLELSGVPYVGAGVLASAVGQDKEYMKAVFTSYGLKVGPYAVIRPREWEQDRSGARKKIVDFAGEHGWPLFVKPARAGSSIGITKVDDLAGLDEAIEEARRHDPKILVEAALRGREIECGVLEFEDGPRASVPAEIPPPSEHAYYDFEAKYIDSTPGIVPAPLTAEETAEVQRLAVAAFDAASCEGLVRADFFLTEDDEFVINEINTMPGFTPISMYPQMWQASGVSYPELVDRLVQAALRRPTGLR
What is the function of this protein?
Cell wall formation.
What are the official names of this protein?
D-alanine--D-alanine ligase, D-Ala-D-Ala ligase, D-alanylalanine synthetase.
What is the protein family that this protein belongs to?
Belongs to the D-alanine--D-alanine ligase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SDC3_MOUSE
Sequence: MKPGPPRRGTAQGQRVDTATHAPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLEGSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDMALAAPTAPAMLPTTVIQPVDTPFEELLSEHPSPEPVTSPPLVTEVTEVVEESSQKATTISTTTSTTAATTTGAPTMATAPATAATTAPSTPEAPPATATVADVRTTGIQGMLPLPLTTAATAKITTPAAPSPPTTVATLDTEAPTPRLVNTATSRPRALPRPVTTQEPDVAERSTLPLGTTAPGPTEMAQTPTPESLLTTIQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAAAKPSPPLGTLPKGARPGPGLHDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA
What is the function of this protein?
Cell surface proteoglycan that may bear heparan sulfate.  May have a role in the organization of cell shape by affecting the actin cytoskeleton, possibly by transferring signals from the cell surface in a sugar-dependent mechanism (By similarity).
What are the official names of this protein?
Syndecan-3, SYND3.
What is the protein family that this protein belongs to?
Belongs to the syndecan proteoglycan family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type I membrane protein.