PharMolix/UniProtQA huggingface dataset:
Protein: ATG2_PICPA
Sequence: MAAWMPQNIQKRLLRYVLQQLSLFAEIDLPNLDVSLGTNSKVHLKELQLDPDKVDIPNFYLRNGVVDDMDLTLTLSNGVNIEATGVNLTLAPSMTNGVDFDPGKLSFSLYQSTADLATSVFFVDQDNNELPKTDKELDDEHDSSKNVANDDDSSPLADKENPKQPSKMGNMMAKAVEMALSRLQVQLKDINLTIITDESTFQICIEEASFDTTDGVRKIEFKGAELSVLKPSVYPGDQPQGESQDDSEDDDSVDESSSFDSHPTDFMSSSFIGSREELENSMLNSQSSVYMSATSKLLTKPKHSTRHPSETKPSVTLGHVNEGTLTFEGLQSFENVSIIIDQIHVAVSPIPESLTALLETLSKRLKILRVHSAKSKPSTTTTYTFSSKDGLQEEPEFSDQISTSSSTGFKELKINEIVISLNSALGKNGAFAIDNSLCLSIESLELAMVSEGNLSGTLKTLKMNKSETSEVFSFQPGSNYDVRFEMILDDDNDLYNITILCPKPGVFNLNEEVLNHLLSFCSKIPSTLHSLQSYQYQKAKLASLSNPQSNSNNDQENEIYLQTASFEFILQLTSSDKVKLTSFPLSFNSNTGVIEVERIVVERKFKENQVQGDPPSQDRFKMQPHKSTNSGCLTCRKRQVKCDERKPFCLNCEKSEQKCTGFTHLSKDLPSSSSSLSSDDSYKSILLINGLKTYLFKKPKKVKTFDKSGIQCSYLSPNASEIELIELEMTMSDFTSLIDSLELFFEQLKVVNHPKMDIAKEKTVFRTSFNSRNPVRNPRALGSQTGAMFSHSSLVSFLRINSVSFLLKEALNGFGDVSGRIKSINCNFHVKGFQDFFVGSLDVARIHKLSSQLILEKVDAPGNKKPMLIARLKSSSLTIQLADCLAHYYGEWFSFLHQCNMKEREIVKRQEDIGPKDRARDSNNFVISLHLNNIIIELNPVSLKSKAVLFIKKGCGTVTFGSQRLSISSSLTEITPLLIDDTKNLKNEIKLDSKNSHPLGNSFLLLLMDMGYISMGMLSSVSVSFETESSASLIAPVNVNVMCDTLRLDICADSLQCLLNLIKDLRQPIIVPFEQKYRTQPETPLDALKDVDFDAFLPQKTKDSNNVAATKTRTFSETALNGAFRPKVYSDGSLEIIDNYYEHESVNQGLDNRTYGDLEVFEENSEDDISLENSLNMKHDHFYHTSFMDNTRNTEHVPFKLNLSVEAVYIRLFDGYDWKETRVSILNAVRRVEAKAAAELSRIEKIRNTKLRRDSSASNSGNEGSLQTDDDSATSGSVSEPVIEETLYQSIHLSLPVGMEPTLLAERVNNDVNFKRASSDSLDKTQSPSSVSSKSQVSSPQTRRLKLKRSTFHKVALELRNLSITFKLLSSFDPTTIKNKSSIRNPNSAEIVNRISVEVDDFLITDNIPTSIWKTFVTYLKEAGSRELNSKMVHLDIATIRPTRLLATTEMRIETNVLPLRLYVDQDTLDFLTRFGEFKDLRFVPQVVDDDDLFVSKLHVFPVRLKLDYKPKTVDYAGIRSGKTSEFMNFFILDEASIGLRKGWTWIGGLNNQVNSHTKREYGTPDITRNQLKGVLSGLASINSVVKISSGFKDLIAIPMEEYRRDGRLITGVRKGAFSFAKTTGNELLKLGVKLVAGTQTILENTEQVLGGEGNLARMPVQVKERKQRRDSDEGNFYVITDRQTYERNLKKTSMNESIIGKTSLREANRFDEEYDDDDDDEDDLVNKIKPHLRNTMLDSQLFLDDNEIEDEXRGARRPDESQKTISLYANQPTTMKEGLQLAYQSFGRNIDSAKRAISKASSKVSEDNRTSNIAYEVMKATPVVVLRPIIGTTEAVSKALLGGLNQFDPDNRSKSEDKYKQ
What is the function of this protein?
Lipid transfer protein required for autophagosome completion and peroxisome degradation (PubMed:11533052, PubMed:11856375).  Tethers the edge of the isolation membrane (IM) to the endoplasmic reticulum (ER) and mediates direct lipid transfer from ER to IM for IM expansion.  ATG2 binds to the ER exit site (ERES), which is the membrane source for autophagosome formation, using basic residues in its N-terminal region (NR) and to the expanding edge of the IM through its C-terminal region.  The latter binding is assisted by an ATG18-PtdIns3P interaction.  ATG2 then extracts phospholipids from the membrane source using its NR and transfers them to ATG9 to the IM through its predicted beta-sheet-rich structure for membrane expansion (By similarity).
What are the official names of this protein?
Autophagy-related protein 2, Glucose-induced selective autophagy protein 11, Pexophagy zeocin-resistant mutant protein 7.
What is the protein family that this protein belongs to?
Belongs to the ATG2 family.
What are the subcellular locations of this protein?
Prevacuolar compartment. Preautophagosomal structure membrane; Peripheral membrane protein. Endoplasmic reticulum membrane; Peripheral membrane protein.
Protein: RL30_STRP6
Sequence: MAQIKITLTKSPIGRKPEQRKTVVALGLGKLNSSVVKEDNAAIRGMVTAISHLVTVEDVK
What are the official names of this protein?
50S ribosomal protein L30.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL30 family.
Protein: APT_GRAFK
Sequence: MELKSYVREIADFPKKGVSYKDITPLLLDPEAMRLAVKLFMKNLPHGKIDKVVGIESRGFFFATMLAEKLNAGFIPVRKPGKLPHRTHKENYDLEYGSDSLEIHEDAIKKGEKVLLHDDVLATGGTAAATCKLIEKCGGEIVQCNFLVELEFLKGVDKLKGYDVCSLIKYS
What is the function of this protein?
Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
What are the official names of this protein?
Adenine phosphoribosyltransferase, APRT.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MSRA_RHORT
Sequence: MATATFAAGCFWGVEETFRKIPGVTGTTVGYTGGHFKEPTYRQVCAGDTGHAEAVRVDYDPDKVTYEQLLDVFWAAHDPTQVDRQGPDIGDQYRSAIFYHDAGQEAAAGASRARLEQSGALSRAIATRIEPAGPFWPAEEYHQRYIDKQRARTGVAPACH
What is the function of this protein?
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation.  Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
What are the official names of this protein?
Peptide methionine sulfoxide reductase MsrA, Protein-methionine-S-oxide reductase, Peptide-methionine (S)-S-oxide reductase, Peptide Met(O) reductase.
What is the protein family that this protein belongs to?
Belongs to the MsrA Met sulfoxide reductase family.
Protein: IF3M_HUMAN
Sequence: MAALFLKRLTLQTVKSENSCIRCFGKHILQKTAPAQLSPIASAPRLSFLIHAKAFSTAEDTQNEGKKTKKNKTAFSNVGRKISQRVIHLFDEKGNDLGNMHRANVIRLMDERDLRLVQRNTSTEPAEYQLMTGLQILQERQRLREMEKANPKTGPTLRKELILSSNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFSSRPQAVQGGKALMCVLRAFSKNEEKAYKETQETQERDTLNKDHGNDKESNVLHQ
What is the function of this protein?
IF-3 binds to the 28S ribosomal subunit and shifts the equilibrum between 55S ribosomes and their 39S and 28S subunits in favor of the free subunits, thus enhancing the availability of 28S subunits on which protein synthesis initiation begins.
What are the official names of this protein?
Translation initiation factor IF-3, mitochondrial, IF-3(Mt), IF-3Mt, IF3(mt), IF3mt.
What is the protein family that this protein belongs to?
Belongs to the IF-3 family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: ENPP3_MOUSE
Sequence: MDSRLALATEEPIKKDSLKKYKILCVVLLALLVIVSLGLGLGLGLRKPEEQGSCRKKCFDSSHRGLEGCRCDSGCTGRGDCCWDFEDTCVKSTQIWTCNLFRCGENRLETALCSCADDCLQRKDCCADYKTVCQGESPWVTEACASSQEPQCPPGFDLPPVILFSMDGFRAEYLQTWSTLLPNINKLKTCGIHSKYMRAMYPTKTFPNHYTIVTGLYPESHGIIDNNMYDVHLNKNFSLSSVEKSNPAWWSGQPIWLTAMYQGLKAACYYWPGSDVAVNGSFPTIYRNYSNSVPYERRITTLLQWLDLPKADRPSFYTIYVEEPDSAGHSSGPVSAGVIKALQSVDNAFGMLMEGLKQRNLHNCVNIIVLADHGMDQTSCDRVEYMTDYFPKINFYMYQGPAPRIRTRNIPQDFFTFNSEEIVRNLSCRKPDQHFKPYLTPDLPKRLHYAKNVRIDKAHLMVDRQWLAFRSKGSSNCGGGTHGYNNEFKSMEAIFLAHGPSFIEKTVIEPFENIEVYNLLCDLLHIEPAPNNGTHGSLNHLLKTPFYKPSHAGELSTPADCGFTTPLPTDPLDCSCPALQNTPGLEEQANQRLNLSEGEVAATVKANLPFGRPRVMQKNGDHCLLYHRDYISGYGKAMKMPMWSSYTVLKPGDTSSLPPTVPDCLRADVRVAPSESQKCSFYLADKNITHGFLYPAIKGTNESRYDALITSNLVPMYKEFKKMWDYFHEVLLIKYAIERNGLNVVSGPIFDYNYDGHFDAPDEITQYVAGTDVPIPTHYFVVLTSCKDQTHTPDSCPGWLDVLPFIVPHRPTNIESCSENKTEDLWVEERFQAHAARVRDVELLTGLDFYQEKAQPVSQILQLKTYLPTFETII
What is the function of this protein?
Hydrolase that metabolizes extracellular nucleotides, including ATP, GTP, UTP and CTP (By similarity).  Limits mast cell and basophil responses during inflammation and during the chronic phases of allergic responses by eliminating the extracellular ATP that functions as signaling molecule and activates basophils and mast cells and induces the release of inflammatory cytokines (PubMed:25692702).  Metabolizes extracellular ATP in the lumen of the small intestine, and thereby prevents ATP-induced apoptosis of intestinal plasmacytoid dendritic cells (PubMed:28225814).  Has also alkaline phosphodiesterase activity (By similarity).
What are the official names of this protein?
Ectonucleotide pyrophosphatase/phosphodiesterase family member 3, E-NPP 3, Phosphodiesterase I beta, PD-Ibeta, Phosphodiesterase I/nucleotide pyrophosphatase 3.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type II membrane protein. Apical cell membrane; Single-pass type II membrane protein. Secreted. Note=Detected at the cell surface of basophils (PubMed:25692702). Detected at the apical plasma membrane of bile duct cells. Located to the apical surface in intestinal and kidney epithelial cells. Secreted in serum, and in lumen of epithelial cells (By similarity).
Protein: SURE_CHLPM
Sequence: MTKQDRRPEILVCNDDGIEGEGIHVLAASMKKLGNVTVVAPAEPHSGMSHAMTLGVPLRIKEFRRNNRFFGHTVSGTPVDCIKVALSHIMPVKPDLIVSGINYGSNTATSTIYSGTVAAALEGAIQGVTSIAFSLTTYEHADFTYAGKFARKLARKVLQKGLPADTILSANIPNVPESDIAGVVITRQGRSRWSEDAIERNDMYGNPYYWLNGTLRLQDSEMDKDEYAVRRNFVTITPLSFDLTNRDFLGTLEQWKLQQ
What is the function of this protein?
Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.
What are the official names of this protein?
5'-nucleotidase SurE, Nucleoside 5'-monophosphate phosphohydrolase.
What is the protein family that this protein belongs to?
Belongs to the SurE nucleotidase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FYV10_ASPCL
Sequence: MAAELTSTKLNAENHLLLDQPLLRVPHELARRNFKSVQRLVEREREYVLPALKEAANASLANTQTPDQTLAALDAMISRMQGLKRKMESLQEEEKRIQEQSRKRIQHLECLHQIPSLADVKYDQWSRVRLDRLVIDHMLRSGYTASAQQLAQEKGIVDLVDLDVFTQCQRIAQSLRHGETRDALQWCNENKAALKKSRFNLEFELRLQQYIEIIRTGDRGRFIDAMAHAKRYLTPYIETQSMEIHRAAGLLAFPRDTKADPYKSMYSSDRWTYLSDLFIRTHHELLSLSSRPLLHIALSAGLSALKTPSCHSEYTSPSSNSLSTTTSVCPICSTELKELARNMPYAHHAKSYVENDPIILPNGRIYGQQRLLDMSKKVGCVETGKVKDPTTGEIFDESEMKKVYIM
What is the function of this protein?
Involved in the proteasome-dependent degradation of fructose-1,6-bisphosphatase.
What are the official names of this protein?
Protein fyv10.
What is the protein family that this protein belongs to?
Belongs to the FYV10 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: CLPX_NITOC
Sequence: MNNDKPRRGDDDRLLYCSFCGKSQHEVRKLIAGPSVFICDECVELCNDIIREEMQDRLSSGKSSHLPTPHEIRDILNQYVIGQNHAKKVLSVAVYNHYKRLQLGKKNDDVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQTGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGGRKHPQQEFLQVNTANILFICGGAFAGLEKIIRDRSKKGGIGFSAEVKSVEDKRSMGEVLQAVEPEDLIKYGLIPEFVGRMPVVATLDELDEAALIRILREPKNALTKQFARLFEMENCKVEFREDALRAVATKAMELKTGARGLRSILENVLLDTMYDLPSMDHVSKVVIDESVVKGEAEPLLIYENQETKAASD
What is the function of this protein?
ATP-dependent specificity component of the Clp protease.  It directs the protease to specific substrates.  Can perform chaperone functions in the absence of ClpP.
What are the official names of this protein?
ATP-dependent Clp protease ATP-binding subunit ClpX.
What is the protein family that this protein belongs to?
Belongs to the ClpX chaperone family.
Protein: RR5_TRICV
Sequence: MSTDLKQVNKSKKALQRNDNLSESKFVERLIKISRVSKVTKGGKKLSFRAIVVVGNENGQVGVGVGKADDVVNAFKKAKADGRKNLIKIPITKSLSIPHNVIGIFGACKIIMRPSIEGSGVIAGGSVRTVLEVAGIKNVIAKQLGSNNVLNNARAAVSGLNNLTTKSQVLKKRDLHSNSSEKINS
What is the function of this protein?
With S4 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S5, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS5 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RS3_YERPB
Sequence: MGQKVHPNGIRLGIVKAWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRKGRK
What is the function of this protein?
Binds the lower part of the 30S subunit head.  Binds mRNA in the 70S ribosome, positioning it for translation.
What are the official names of this protein?
30S ribosomal protein S3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS3 family.
Protein: NDK_ECODH
Sequence: MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR
What is the function of this protein?
Major role in the synthesis of nucleoside triphosphates other than ATP.  The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
What are the official names of this protein?
Nucleoside diphosphate kinase, NDK, NDP kinase, Nucleoside-2-P kinase.
What is the protein family that this protein belongs to?
Belongs to the NDK family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NRDR_LIMRJ
Sequence: MRCPHCHKNGSRVVDSRPSEDGSFIRRRRECIHCGFRFTTFERYEETPLLVIKKDGTRQEFSRQKILNGIVRSAEKRPVSMERLTKIADKVEKQIRSIGESEVSSQIIGKFVMNELKGVDEIAYIRFASVYRQFKDVDAFMSELETMMKAEHKK
What is the function of this protein?
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.
What are the official names of this protein?
Transcriptional repressor NrdR.
What is the protein family that this protein belongs to?
Belongs to the NrdR family.
Protein: LEPA_PHOV8
Sequence: MKNIRNFCIIAHIDHGKSTLADRLLEFTKTIQVTEGQMLDDMDLEKERGITIKSHAIQMEYEYGGEKYVLNLIDTPGHVDFSYEVSRSIAACEGALLIVDASQGVQAQTISNLYMALEHDLEIIPVLNKCDMASAMPDEVEDEIIDLLGCKHEDIIRASGKTGMGVEEILKAVVERIPHPTGDEEAPLQALIFDSVFNSFRGIIAYFKIENGVIRKGDKVKFFNTGKEYDADEIGVLKMDMIPRAELRTGDVGYIISGIKTSREVKVGDTITHIARPCEKAIAGFEEVKPMVFAGVYPIEAEDYENLRASLEKLQLNDASLTFQPESSLALGFGFRCGFLGLLHMEIVQERLDREFDMNVITTVPNVSYMVYDKQGHANEVHNPGGMPDPTLIDHIEEPFIDATIITATDYIGPIMTLCLGKRGELVRQNYVSGNRVEIHYKMPLGEIVIDFYDKLKSISKGYASFDYHQSGFRPSKLVKLDILLNGEPVDALSTLTHVDNAYNLGKRMCEKLKELIPRQQFDIAIQAAIGAKIISRETIKAVRKDVTAKCYGGDVSRKRKLLEKQKRGKKRMKQIGNVEVPQKAFLAVLKLD
What is the function of this protein?
Required for accurate and efficient protein synthesis under certain stress conditions.  May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.  Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly.  Binds to ribosomes in a GTP-dependent manner.
What are the official names of this protein?
Elongation factor 4, EF-4, Ribosomal back-translocase LepA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: RL6_PROA2
Sequence: MSRIGKMPVQLADQAKIEIKDNVITVSGPKGTLQQQLVPEVSVDIADGQITVTRADDTKRSRAMHGLYRMLVSNMVDGVTKGFTRKLLISGVGFRAEMKSDLLALTLGYSHQIYFKAPEEVTIACPDPTTIEISGIDKALVGQVAAKIRSFRKPEPYRGKGIKFSDEVVRRKEGKTAGKK
What is the function of this protein?
This protein binds to the 23S rRNA, and is important in its secondary structure.  It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
What are the official names of this protein?
50S ribosomal protein L6.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL6 family.
Protein: URED_MAGMM
Sequence: MRSAATLPYESNPSQGVQGCVRLSFVQRHGQSRLESLYHSDPMRVIIPQTPPGEPVHGVVVTTSGGLVGGDQLDIELIARPHTQLLVMTQAAEKVYRSTGADSTVQIALHVEAGAFLEWLPQETILFDQGRLRRTTQVYLGENARLLAGEMVLFGRSAHGEQLRQGLLRDSWLVHREGALVWADLLKLEGDLQHPLQHPAALAGAKGCATLLLAGEEAAQLLEPLRGWLAEAGMEGPSVKVAAGVVHGLLVVRWLGWDARLLRQGYGQMWSWLRGQLGRPARMPRLWDI
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreD.
What is the protein family that this protein belongs to?
Belongs to the UreD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMG_HALH5
Sequence: MEITEFRQRLEERGFSLSQAQLDQFEHYYHTLVEWNEKMNLTAITDKEGVYLKHFYDSLTAAFYVDFTKVATVVDVGAGAGFPSIPLKIVFPELRVTIVDSLKKRIGFLEHLSETLGLKGTAFYHDRAETFAQKKEHREQYDLVLARAVARLPVLSELCLPLAKVEGTFVAMKGAGANEELTAAQGALKKLGGSVIQNEQFTLPIEESERHVIIIRKERSTPKKYPRKPGTPNKQPLS
What is the function of this protein?
Specifically methylates the N7 position of guanine in position 535 of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase G, 16S rRNA 7-methylguanosine methyltransferase, 16S rRNA m7G methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
Protein: QCR7_MOUSE
Sequence: MAGRSAVSASSKWLDGFRKWYYNAAGFNKLGLMRDDTLHETEDVKEAIRRLPEDLYNDRMLRIKRALDLTMRHQILPKDQWTKYEEDKFYLEPYLKEVIRERKEREEWAKK
What is the function of this protein?
Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol.  In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
What are the official names of this protein?
Cytochrome b-c1 complex subunit 7, Complex III subunit 7, Complex III subunit VII, Ubiquinol-cytochrome c reductase complex 14 kDa protein.
What is the protein family that this protein belongs to?
Belongs to the UQCRB/QCR7 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: MNMA_BRADU
Sequence: MLNSLDLEGRPQDTRVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAAKLGIPHYVLDYEDRFRESVIDNFADSYALGETPVPCIECNRSIKFRDLLKTARELGAQALATGHYVASRRLDDGSRVLVCAADADRDQSYFLFATTQEQLDYLRFPLGDMTKPETRELARRFGLAVADKHDSQDICFVPTGRYTDIITRLRPNAMDPGDIVDLDGRVLGRHNGIANFTVGQRRGLGIAAHAPLFVVRLEAANRRVVVGPREALKMHRISLRDVNWLGGGDIDSAIGNGLEMFVRVRSTRSPQPAWLRGAGGHYEIELVAGEEGVSPGQACVFYDAPSGQARVLGGGFIQSAAAKVASNPARPLVEAVRG
What is the function of this protein?
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
What are the official names of this protein?
tRNA-specific 2-thiouridylase MnmA.
What is the protein family that this protein belongs to?
Belongs to the MnmA/TRMU family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AMP1_PINMO
Sequence: METKRLAYVMFVLVCLFLAMAQPSQASYFSAWAGPGCNNHNARYSKCGCSNIGHNVHGGYEFVYQGQTAAAYNTDNCKGVAQTRFSSSVNQACSNFGWKSVFIQC
What is the function of this protein?
Antimicrobial peptide.
What are the official names of this protein?
Antimicrobial peptide 1, 10.6 kDa protein, PMAP1.
What are the subcellular locations of this protein?
Secreted. Secreted, cell wall.
Protein: RUTE_YERE8
Sequence: MAQILTPDALATLFTDARTHNGWLDKPVEDALLKQAYHLARMGPTSANCCPARFVFICSSEAKERLKPALSSGNLAKTLQAPVTAIVAYDPVFYDALPKLFPQSDARSWFTSSPELATETAFRNSSLQAAYLIIACRALGLDTGPMSGFNNAQVDEIFLAEKGWKSNLLVNIGYGDINKLYERAPRLAFDEACQVL
What is the function of this protein?
May reduce toxic product malonic semialdehyde to 3-hydroxypropionic acid, which is excreted.
What are the official names of this protein?
Probable malonic semialdehyde reductase RutE.
What is the protein family that this protein belongs to?
Belongs to the nitroreductase family. HadB/RutE subfamily.
Protein: CYSN_METEP
Sequence: MTIHQSPEAFGYDAFLRQHQNKEVLRFITCGSVDDGKSTLIGRLLHDTKQIFDDQVTALQRDSRKHGTQGGEVDLALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADLAVILVDARHGLTRQSRRHALLVSLLGIRRVALAINKMDLVGWSQDKFEAIVSGFQAFAAPLNFTEVRAIPLSAKNGDNVVLPGTAATWYTDVPLLRYLEEVPVKSEERAAAFRMPVQWVNRPNSDFRGFSGLIASGSVAPGDAVTVAPSGKTSTIARIFTADGDLERASEGQSVTLVLADEVDASRGAVIATSDAPLTLTDSLDVRLFWAAESDLVPGANLWAKVGTQTVNAVVKAVHRRIDPETGQAGPADKLAVNDIGDVTLTLDRQIAVDPYAENRDTGSLILIDRETTDTAALGLVQRVVASSKVAPAPTASVTASAEPARSGGLLAGLKRLFGG
What is the function of this protein?
With CysD forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway.  APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.
What are the official names of this protein?
Sulfate adenylyltransferase subunit 1, ATP-sulfurylase large subunit, Sulfate adenylate transferase, SAT.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
Protein: ILVD_METB6
Sequence: MTDLRSDTIRKGYERAPNRSLLRSLGVTDREIELPFIGIANAFNTIVPGHTHLRQLSDKVKEGIAAAGGVPFEFGVIGICDGIAMGHEGMRYSLPSRENIADSIELMVQAHRFDGLVCVGTCDKIVPGMLMAAVRTNIPTIVVTGGAMLPGSSGGKDLSLIDVFEGVGKVAAGTMEEDALKELECCAMPGCGSCQGLYTANTMACMTETMGMSLPGCAAVPAVEAAKLRIARESGEAIIPLVKKNSTARDIVTKKSLENAIRVDMALGGSTNTVLHLMAIATEAEIPLSLADFNRIADEIPHICHMLPAGPYSMQALYRAGGIPAVLKRLEKHLDDCPTVSGLSLYQVARNAMIKNEQVIRSLDAPVSPAGGLRILFGSLAPDGAVVKSAAVPKEIWKHTGPARVFESEEPAMAAILSRQIHEGDAVIIRNEGPRGGPGMPEMLSATSALMGVGYKNVVLITDGRFSGGTRGPCIGHVAPEAAVGGPIALVQDGDRIAVDLFMRTIDLLVDPEVLTSRKAAWKPVMRPVTGVLARYAKTVGQANLGAVLR
What is the function of this protein?
Functions in the biosynthesis of branched-chain amino acids.  Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
What are the official names of this protein?
Dihydroxy-acid dehydratase, DAD.
What is the protein family that this protein belongs to?
Belongs to the IlvD/Edd family.
Protein: LEUC_CYTH3
Sequence: MGKTLFEKVWNAHVVTEVKDGPSILYIDKQLIHEVTSPQAFAGIEKRGIGVFRPERTLATPDHNVPTKGQNLPIVEDLSRFQVDKLTENCNKFGVTLYGLGHASQGVVHVVGPETGTTLPGMTIVCGDSHTSTHGAFGSIAFGIGTSEVEQVLATQCLMQTKAKTLKIEINGKLAKGVTAKDVILYVIAQISAAGGTGYFVEYCGSAITSLSMEARMTICNMSIEMGARGGMIAPDETTFNYIKGREFAPKGAKWDEAVAYWKTLYSDSDAVFDKTLKYDAADIGPMITYGTNPGMGISVNKNIPSLDSIEESNKVTFNKALDYMGFHAGDSLIGKQVNWVFLGSCTNGRIEDLRQFAEFVKGKQKAANINALIVPGSKQVEKQAIAEGIDKVLAEAGFELREPGCSACLAMNEDKVPKGEYCVSTSNRNFEGRQGPGARTLLVSPLTAAAIAVSGKIVDVREMLN
What is the function of this protein?
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.
What are the official names of this protein?
3-isopropylmalate dehydratase large subunit, Alpha-IPM isomerase, IPMI, Isopropylmalate isomerase.
What is the protein family that this protein belongs to?
Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily.
Protein: MY108_ARATH
Sequence: MDEKGRSLKNNNMEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSSCITTSNNQFMNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYSGQMGNSYYPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGAASSSDSLWNIGETDEEFWFLQQQQQFNNNGSF
What is the function of this protein?
Transcription factor contributing to the regulation of stamen maturation and male fertility in response to jasmonate signaling.  Required for correct timing of anther dehiscence.  Acts as a negative regulator of abscisic acid-induced cell death.  Not involved in the regulation of BOI.  Regulated by MYB21 and at a lower level by MYB24.  Negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner.
What are the official names of this protein?
Transcription factor MYB108, Myb-related protein 108, AtMYB108, Protein BOTRYTIS-SUSCEPTIBLE 1.
What are the subcellular locations of this protein?
Nucleus.