PharMolix/UniProtQA huggingface dataset:
Protein: RPOZ_TOLAT
Sequence: MARVTVEDAVKQVGNRFDLVLVAARRARQLAVQGKEPLVDEENDKPTVIALREIEEGLISNQFMDAQERIEQQQQEASELAAVAALTQDRDYGF
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: MBF1_CRYNJ
Sequence: MSDWDKPTVIGFRQQKPTVAKGSTLNAAQRAGLVISSESKGAGQSKGPADHQRIAKLDRDDAPKPPEKVSADVGKAVATARMAIKNAEGKSMTQKELATSVNAKPQDIADLESGRAVPDQALLGKLERKLNVKLRGAKNLIGTPLHPKKK
What is the function of this protein?
Transcriptional coactivator that stimulates transcriptional activity by bridging regulatory proteins and TBP, thereby recruiting TBP to promoters occupied by DNA-binding regulators.
What are the official names of this protein?
Multiprotein-bridging factor 1.
What is the protein family that this protein belongs to?
Belongs to the MBF1 family.
Protein: GIP4_PHYIN
Sequence: MKSITTASFALILFGVGAASADHASRVLVLGGGAVPSGTKTYTTGIRATIDGDSFCGGSLISPTHVLTTTACIGYTKPANWVSVGTHYLNGTHDGEQIKVVSAQNHTGFNSTSGSYDVALLRLERPSKFMPVKLPAADDSDVIPGMRSSLVGWGYTSYPNGTKAYELQGVGLEVWSNTDCARIYSLDDTMVCAGGGVGKDSCNGDTGGPLIKERGPGDEDDIVVGLVSLGSRMWCGVPRSVFACVESLGMDQLGH
What is the function of this protein?
Secreted effector that suppresses host plant glucan elicitor-mediated defense responses (PubMed:18624645).  Targets host endoglucanases and inhibits the endoglucanase-mediated release of elicitor-active glucan oligosaccharides from P. infestans cell walls (PubMed:18624645).
What are the official names of this protein?
Glucanase inhibitor protein 4.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1 family.
What are the subcellular locations of this protein?
Secreted.
Protein: NU5M_CARAU
Sequence: MTLIMHSSLLLIFFILMYPLLTTLNPNQQGSNMAGMTKTAVSSAFFISLLPLMIFLNLKTEGIITNWQWMNTQTFDVNISFKFDHYSLIFVPIALYVTWSILEFALWYMHSDPYIDRFFKYLLTFLVAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAVIYNRVGDIGLIMTMAWFAMNLNSWEIQQIFVLSKNFDMTIPLMGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNQLALTTCLCLGALTSLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLFSIMPATSTYFTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSFRLVYFVVMGTPRFLALSPINENNPLVINSIKRLAWGSIVAGLIITQNFLPMKTPIMTMPTTLKMAALLVTIAGLLVAMELANMTSKQMKITPIIPLHHFSNMLGFFPTIVHRLLPKLKLTLGQSAATQLDKTWLEAMGPKGLALTQMTMAKVTNDVSRGMIKTYLTIFLLTLILAILPVLL
What is the function of this protein?
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis.  Complex I functions in the transfer of electrons from NADH to the respiratory chain.  The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
What are the official names of this protein?
NADH-ubiquinone oxidoreductase chain 5, NADH dehydrogenase subunit 5.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 5 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: PRMA_ACIBY
Sequence: MKWLQIHITVDQEQVEFTETLLMSLGAVSVTLDDAEDQALLEPLPGETPLWNKVIVTGIYQQDEQDPIDVDTLEAFLKAQLPDVPMRHEELEDQVWERAWMDYYEPIQIGEKFWIVPEWLEPPEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAKKVYATDIDPQAVLATKQNAELNGVLDRLYVGLPEEFDQEFKPQQADVLVANILAGPLMALAPEFAKLLKSDGDFALAGVIEEQVADVSGVYSEFFDILDVEKREENWCRISGKRKTTN
What is the function of this protein?
Methylates ribosomal protein L11.
What are the official names of this protein?
Ribosomal protein L11 methyltransferase, L11 Mtase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. PrmA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RR11_NICTO
Sequence: MAKAIPKISSRRNGRIGSRKGARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAVANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGCRPPKKRRV
What are the official names of this protein?
30S ribosomal protein S11, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS11 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RS10_THEON
Sequence: MQKARIKLASTNIKALNEVTDQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEGTATFDRFELRVHKRLVDIEADERAMRQIMRIRVPEDVTIEIELIS
What is the function of this protein?
Involved in the binding of tRNA to the ribosomes.
What are the official names of this protein?
30S ribosomal protein S10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS10 family.
Protein: CH601_SYNAS
Sequence: MAAKEIKYDSVARDKVMKGVDTLANAVKVTLGPRGRNVVIEKAWGGPTITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDMAGDGTTTATILAQAIYREGTKLAAAGMNPMSLKRGIDKSVQLVIDELKKISKDIRDKKEITQVGTISANNDNTIGEIISEAMEKVGKEGVITVEEAKGMETTLEIVEGMQFDRGYVSPYFVTDPEKMEVVMEDPYILLYDKKISVMQDLVPILEQIARSGRPMLIVSEDLEGEALATLVVNNIRGTLKCAAVKAPGFGDRRKAMLEDIAILTGGKVVSEELGIKLDSITLTDLGTCKRLHITKDNTTIVDGAGSQADIEGRVKQIRTQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRTLPALAGMDLPDDERPGLNIVKRAVEEPMRQIAANAGFEGSIVVEKVKENTGNFGFNADTEKYVDMMEAGIIDPTKVVRFALQNAASVASLLLTTEAMIAEAPKKKGAGMPGGMPPDMGDMEY
What is the function of this protein?
Together with its co-chaperonin GroES, plays an essential role in assisting protein folding.  The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.
What are the official names of this protein?
Chaperonin GroEL 1, 60 kDa chaperonin 1, Chaperonin-60 1, Cpn60 1.
What is the protein family that this protein belongs to?
Belongs to the chaperonin (HSP60) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FUCO_RAT
Sequence: MWDLKSEWWAVGFGLLLLLAASAQAGGLAPHHYTPDWPSLDSRPLPRWFDEAKFGLFVHWGVYSVPAWGSEWFWWHWQGEQSSAYVRFMKENYPPGFSYADFAPQFTARFFHPEEWADLFQAAGAKYVVLTAKHHEGFTNWPSAVSWNWNSKDVGPHRDLVGELGAAVRKRNIRYGLYHSLFEWFHPLYLLDKKNGLKTQHFVSTKTMPELYDLVNRYKPDLIWSDGEWECPDSYWNSTEFLAWLYNESPVKDQVVVNDRWGQNCSCRHGGYYNCEDKYRPHSLPDHKWEMCTSVDKASWGYRRDMSMSTIVDENEIIEELVQTISLGGNYLLNIGPNKDGVIVPIFQERLLAVGKWLQINGEAIYASKPWRVQSERNKTVVWYTTKDSAVYATFLHWPEDGVVNLQSPKMTSATKITMLGMEGELHWTQDPLEGVLITLPQLPPGTFPVESAWTLKLTKVN
What is the function of this protein?
Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
What are the official names of this protein?
Tissue alpha-L-fucosidase, Alpha-L-fucosidase I, Alpha-L-fucoside fucohydrolase 1, Alpha-L-fucosidase 1.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 29 family.
What are the subcellular locations of this protein?
Lysosome.
Protein: ATPB_NOVAD
Sequence: MATVLSSTGKISQVIGAVVDVTFDGELPAILSALETDNNGNRLVLEVAQHLGENTVRTIAMDSTDGLTRGQPVTNTGAQISVPVGPKTLGRIMNVIGEPIDERGPVGAEQTAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKDADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQLQERITSTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLTPAVVGQEHYETARRVQETLQKYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFHVAEVFTGIPGKFVQVEDTVRSFKAVVDGEYDHLPEAAFYMVGGIDEAVEKAKKLAAEA
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: SPB8_HUMAN
Sequence: MDDLCEANGTFAISLFKILGEEDNSRNVFFSPMSISSALAMVFMGAKGSTAAQMSQALCLYKDGDIHRGFQSLLSEVNRTGTQYLLRTANRLFGEKTCDFLPDFKEYCQKFYQAELEELSFAEDTEECRKHINDWVAEKTEGKISEVLDAGTVDPLTKLVLVNAIYFKGKWNEQFDRKYTRGMLFKTNEEKKTVQMMFKEAKFKMGYADEVHTQVLELPYVEEELSMVILLPDDNTDLAVVEKALTYEKFKAWTNSEKLTKSKVQVFLPRLKLEESYDLEPFLRRLGMIDAFDEAKADFSGMSTEKNVPLSKVAHKCFVEVNEEGTEAAAATAVVRNSRCSRMEPRFCADHPFLFFIRHHKTNCILFCGRFSSP
What is the function of this protein?
Has an important role in epithelial desmosome-mediated cell-cell adhesion.
What are the official names of this protein?
Serpin B8, Cytoplasmic antiproteinase 2, CAP-2, CAP2, Peptidase inhibitor 8, PI-8.
What is the protein family that this protein belongs to?
Belongs to the serpin family. Ov-serpin subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PHYA_ARTBC
Sequence: MSSMASVLFAALAISGVQVTPSRGYGCFPQYSQFWGQYSPYFSLEGRSAISSAVPPGCKITFAQSLQRHGARFPTADKSATYSSLIKRIQEDATEFKDEFAFLKDYKYNLGADDLTPFGESQLYDSGINFFQRYHGLTKDSKVFVRSAGSERVVASAHKFVEGFNKAKGSEKGGATKLDLIISEEDRRKNPIAPQGCDAFDNDETADKITDQFRSTFTQPIVDRVNKKLPGANIKIGDIKSLMAMCPFDTVARTPDASKLSPFCHLFSHEEFRHYDYLETLGKFYGHGPGNSFGPAPGIGYVNELIARLTSSPVKDNTTVDHELDDNPKTFPLGLPLYADFSHDNSMTVIFTAMGLFNATKPLSPTKITDPADASGYSASWTVPFGARAYFEKMVCDHSPSAKQEYVRVLLNDRVFPLQDCHTDFLGRCKLDDFINGLTYARSNGNWDQCEVSPPK
What is the function of this protein?
Catalyzes the hydrolysis of inorganic orthophosphate from phytate.
What are the official names of this protein?
3-phytase A, Allergen Asp n 25 homolog.
What is the protein family that this protein belongs to?
Belongs to the histidine acid phosphatase family.
What are the subcellular locations of this protein?
Secreted.
Protein: RS14_EHRCJ
Sequence: MSRKSVIQRNLKRISICSRLKSKRDELKAIIKDQSISMNDRFLAQVKLSKLPRDSSYIRIRNRCLVTGRPRGCYRKFKVSRIVLRQLGSIGQIPGLTKSSW
What is the function of this protein?
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
What are the official names of this protein?
30S ribosomal protein S14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS14 family.
Protein: RS17_BORBZ
Sequence: MARENKKELIGKVVSDKMSKTIVVEIVQRKMHPIYHKYLKVSKKVKAHDEKEVSKVGDKVKIIEVRPISKDKRWSLVEVLEKLK
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: PEPQ_ECOHS
Sequence: MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTEDVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTRDLKLA
What is the function of this protein?
Splits dipeptides with a prolyl residue in the C-terminal position.
What are the official names of this protein?
Xaa-Pro dipeptidase, X-Pro dipeptidase, Imidodipeptidase, Proline dipeptidase, Prolidase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M24B family. Bacterial-type prolidase subfamily.
Protein: ACCA_WIGBR
Sequence: MNLTFLDFEQPIADLESKINSLVELSQRDKTLNINKEINCLRKKSEDLTKKIFSNLNAWQITKIARHPMRPYALDYIKNIFTDFDELSGDRLYGDDKSIIGGIARLNSRPVMILGHQKGRETKEKIFRNFGMPTPEGYRKALRLMKIADRFNMPLITLIDTPGAYPGIEAEERGQASAIATNLREMSMLKIPIICTVIGEGGSGGALAIGVGDKINMMQYSIYSVISPEGCAAILWKNVDKAPIAAEEMGIIATRLKELNLIDNIIPEPLGGAHRNIKIITSNLKNRILKDLKELDKFTTSDLLNNRYKKLMSYGYN
What is the function of this protein?
Component of the acetyl coenzyme A carboxylase (ACC) complex.  First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
What are the official names of this protein?
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, ACCase subunit alpha, Acetyl-CoA carboxylase carboxyltransferase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the AccA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YLAA_BACSU
Sequence: MLFVLELFSHYVLHFERYFILSRQSTLLIQWSIVVLAGLYLLVHHPKINRQRTMFLAGVILRIVLLAGVSVELIHQVQSTNFTSAYLREDGKELLPLLHFLLYGYVLLTAFHYMLMPRDHGGKGKFYTFDLAVVSLPIVQMIFSFFSYWKEYPDGMEPIAFVFLFFIITLPIALNVVFFKLYWRTDKILLGLFYTLIIGLLVLLLAPYPNQISKDYGAVMPYTIYLAMAGFLMSYHLFQKSGKVYVRVNKWVTMAVMVFFVLLLNPIYNIGTAAFAVSKPANVHDSFNFVGEHISSEKAEQILKSFFPTDETLYLHDTNMDVHYFYSFESKGYKAEVDEVSQLIRNYEYLQKAHGKKLTNQEYKRKSIAFLERHGRVLHKDHIETKVSQEDGQTVVRIYLKNQLHKKDHADDGAVFYWEKETLMGFSEDPSIYQLDSLLHVHITEQDIHDKVEQMFTALNISKQPYQITDIESDSLLGSMVRVETKVGIVLEFEGESGCLHSLSLPMKKNISMANSRLQHQILSIFDARGSEKKKKSSQGDMVMYTDSSKTYEFVEAQGQLNVYVYSDTPDQSFPYTYRNGTLAYEKVASLYQDVIYKKRMRPIIVQRGDERHYAWLIIIQPFGSNRHDAYVVDGETQEVKSLYES
What are the official names of this protein?
Uncharacterized protein YlaA.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: NELFD_PIG
Sequence: MAGAAPGAIMDEDYFGSAAEWGDEADGGQQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKHLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGARINQDHKHKYIHILAYAASVVETWKKNKRVSINKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGHVLPVVSYIRKCLEKLDTDISLIRHFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFILVN
What is the function of this protein?
Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II (By similarity).  The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex (By similarity).
What are the official names of this protein?
Negative elongation factor D, NELF-D, TH1-like protein.
What is the protein family that this protein belongs to?
Belongs to the NELF-D family.
What are the subcellular locations of this protein?
Nucleus.
Protein: HEM6_XANOM
Sequence: MNEFDRVRDYLTDLQDRICAAVEAADGKARFAEDLWKREEGGGGRTRILRDGAVFEQAGIGFSDVSGTRLPPSASAHRPELAGATWRACGVSLVFHPHNPYIPTTHMNVRYFRAERDGEVVAAWFGGGFDLTPFYPFDEDVQHWHRVAQALCEPFGEERYAAHKRWCDEYFFLRHRNETRGVGGLFFDDLGKEFEHDFAYQQAVGNGFLDAYMPIVQRRKDTAYGEREREFQLYRRGRYVEFNLVYDRGTLFGLQSGGRAESILMSLPPRVRWEYGFTPEPGSAEARLADYLIPRDWLG
What is the function of this protein?
Involved in the heme biosynthesis.  Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.
What are the official names of this protein?
Oxygen-dependent coproporphyrinogen-III oxidase, CPO, Coprogen oxidase, Coproporphyrinogenase.
What is the protein family that this protein belongs to?
Belongs to the aerobic coproporphyrinogen-III oxidase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RLME_SALPA
Sequence: MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKIRKPDSSRARSREVYIVATGRK
What is the function of this protein?
Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase E, 23S rRNA Um2552 methyltransferase, rRNA (uridine-2'-O-)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUVA_SHEWM
Sequence: MIGRLRGVLVEKQAPEILLEVAGLGYEVQMPLTSFYELPDLNQEAQIYTHFVVREDAQLLYGFITKQERALFRLLIKTNGVGPKLGLTILSGMTAGEFVACVERDDIATLVKLPGVGKKTAERLLVEMRDKLKSLLETSAGSEREFMLKSNYTPAPVVNTAEEDAIAALLSLGYKPAQASKAVSAAFKEGMSSEDLIKSSLKSML
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: RR4_CUSEX
Sequence: MSRYRGPRFKKIRRLGALPGLTNKRPRTVRDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLINYVRIARKAKGSTGEILIQLLEMRLDNILFRLGMASTIPAARQLVNHRHIFVNGHIVDIPSYRCKPRDIITSKDKPKSGALIKNSIEAFPREELPNHLTLHPAPYKGLINQIIDTKWVGLKINELLVVEYYSRQT
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
Plastid 30S ribosomal protein S4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
What are the subcellular locations of this protein?
Plastid.
Protein: SYH_HELPG
Sequence: MITPKVLSGFKDRLPKDAIQKAQLLAKVSVVFQSFGFVPIETPHLEYAEALLPDASSDIQKEIYRFKDHGDRDVALRFDLTVPLARFVSLHHQILGMPFKRYAIGNVFRGERAQKGRYREFTQCDFDFIGSESLVCDAEIIQVIIASLKALDLEDFCVSINHRKILNGICEYFGVSQVNEALRIVDKLEKIGLDGVGEELKKECDLNSNTIKELLEMVQIKQNDLSHAEFFEKIAYLKDYNENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGYYTGIVYETTLNDMKSLGSVCSGGRYDHLTKNFSKENLQGVGASIGIDRLIVALSEMQLLDERSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYPEAQKIKKPFSYANHKGHEFVAVIGEEEFKSETLSLKNMHSGMQLNCLSFLKALEIIGENDEDL
What are the official names of this protein?
Histidine--tRNA ligase, Histidyl-tRNA synthetase, HisRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: XGPT_ALIF1
Sequence: MANKFVITWDNMQMYTRQLAEQLLPADQWKGILAVSRGGLVPAAILARELNIRHVDTVCISSYDHDHQRDMTVVKAMEGDGEGFIIIDDLVDSGDTAVKLREMYPKGKLVTVCAKPAGVHLVDAYVVDIPQDTWIEQPWDMAVTYVDPIAKK
What is the function of this protein?
Purine salvage pathway enzyme that catalyzes the transfer of the ribosyl-5-phosphate group from 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to the N9 position of the 6-oxopurines guanine and xanthine to form the corresponding ribonucleotides GMP (guanosine 5'-monophosphate) and XMP (xanthosine 5'-monophosphate), with the release of PPi.  To a lesser extent, also acts on hypoxanthine.
What are the official names of this protein?
Xanthine-guanine phosphoribosyltransferase, XGPRT, Xanthine phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: SYL_JANMA
Sequence: MQDKYSPAEVEKSAHDHWQAIDAYKAVENAKDKNGKDKKKFYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGWDAFGMPAENAAMANNVPPAQWTYANIDYMKTQMASMGLAIDWSREMTACRPEYYKWNQWMFLKMLEKGIIYKKTGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPMYYARITDYAEELLDHVDNKLPGWPERVRIMQSNWIGKSTGVRFAFTHDIAEEGKLINDGKLWVFTTRADTIKGVTFCAVAPEHALATFAAKSNPELTDFIAECKLGSVIEADMATMEKKGMPTGLFVKHPLTGQLVEVWVGNYVLITYGDGAVMGVPAHDERDFAFAQKYVLPIHPVIDVPGKTFSDVAWHEWYGDKENGRCINSGKYDGLNYQQAVDAIAADLAELGLGEKKITYRLRDWGISRQRYWGTPIPIIHCKDCGDVPVPEKDLPVVLPEDCVPDGSGNPLNKHEKFLHVDCPQCGKPARRETDTMDTFVDSSWYYMRYCSPNSSDAMVDSRNDYWMPMDQYIGGIEHAVLHLLYARFWTKVMRDFGLVKFDEPFTNLLTQGMVLNETYFREDASGKKTWFNPADVQLQLDDKGRPVSAVLSSDGKAVEIGGTEKMSKSKNNGIDPQAQIDQYGADTARLFTMFASPPEQTLEWSGAGVEGANRFLRRVWAYGYNQAARVANASAFDFATLPEAHKALRRETHKILQQADNDYKRIQYNTVVSASMKMLNTLEAAKLDDSPASNAVISEGLSIFLRILNPVAPHITHALWQELGFAKDHGDILDAPWPQVDPAALEQAEIEMMIQVNGKLRGSIIVAKDADKASIEAAALANESVQKFIEGTPKKIIVVPGKLVNIVA
What are the official names of this protein?
Leucine--tRNA ligase, Leucyl-tRNA synthetase, LeuRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLGX_YERPY
Sequence: MAVLTHGSPTPSGAYFDGKGINFTLFSAHAEQVTLCLFDEQGQERQIAMPARTGDIWHGYLPGGKPGQRYGYRVSGPFDPSRGHRFNPHKLLIDPRTRALEGKVGDDPRFTGGVSQPDVRDSAAALPKCLVIHEEYDWQGDKPPAIPWGNTVIYEAHVRGLTQLHPDIPPELRGTYAALAHPALIEHLKTLGITTLELLPVQFHIDEPRLQKMGLSNYWGYNVLAPFAVDPDYASGREGISPLRELRDAVKALHNAGIEVILDVVFNHSAELDVFGPTLCQRGIDNASYYWLTPDGEYDNITGCGNALRLSHPYVTQWVIDCLNYWRDSCHVDGFRFDLGTVLGRTPAFDQHAPLFAALAADERLSACKLIAEPWDIGLGGYQLGNFPTGFSEWNDQYRDAMRGFWLRGEVPRGTFAQHFAASSRLFEQRGRLPSASINQITAHDGFTLLDLLCFNQKHNQMNGEENRDGSDNNHSNNFGCEGLVADAAIWQRRKACQRALLTTLLLSQGTPMLLAGDEQGHSQQGNNNAYCQNNILTWLDWGSADRALMTFTADLIRLRQQIPALTQDQWWQSGDSNVQWLDSQGQALSDAAWEQGCQQQLQILLSQRWLVLINATDHECEMHLPEGEWEGIPPFGVSDHAERLTTWRGSAHTICVLIKRD
What is the function of this protein?
Removes maltotriose and maltotetraose chains that are attached by 1,6-alpha-linkage to the limit dextrin main chain, generating a debranched limit dextrin.
What are the official names of this protein?
Glycogen debranching enzyme, Limit dextrin alpha-1,6-maltotetraose-hydrolase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 13 family.
Protein: NK1R_CANLF
Sequence: MDNVLQVDSDLFPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPNRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLEKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTVSTVVGAHEEELEDGPKTTPSSLDLTSNGSSRSDSKTMTESFSFYSNMLS
What is the function of this protein?
This is a receptor for the tachykinin neuropeptide substance P.  It is probably associated with G proteins that activate a phosphatidylinositol-calcium second messenger system (By similarity).
What are the official names of this protein?
Substance-P receptor, SPR, NK-1 receptor, NK-1R, Tachykinin receptor 1.
What is the protein family that this protein belongs to?
Belongs to the G-protein coupled receptor 1 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.