PharMolix/UniProtQA huggingface dataset:
Protein: PSBM_PROM1
Sequence: METTSFGFAASLLFVGVPTIFLIGLFVSTSDGEKSSFYSDTSKGRLSPEPKK
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  This subunit is found at the monomer-monomer interface.
What are the official names of this protein?
Photosystem II reaction center protein M, PSII-M.
What is the protein family that this protein belongs to?
Belongs to the PsbM family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Single-pass membrane protein.
Protein: SSRP_STRPC
Sequence: MAKGEGHILAQNKKARHDYHIVETVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNADPERTRKLLLKKREITHLANELKGSGMTLAPLKVYLKDGFAKVLIGLAKGKHEYDKRETIKRRDQERDIKKQMKHYNAR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: SUT5_ORYSI
Sequence: MEEGRRGDREAKSAAGWTALSTTKTTLEEKRRLQANGSVGGDAGTSGFRRIVRLFFACMVAGGIQYGWALQLSLLSPYSQTLGISHSYVSLTWICGPIAGFVVQPIVGYYSDRCTMKMGRRRPFILVGCLIICISVMIIGFSADIGRHLGDTKEHCSTYTGPRWSAAMVYIVGFWFLDFANNTVQGPARAMMADLSAGHHGPNVGQSIFSLWMAIGSVLGYLSGANGKWHEWFPWLKTAACCDACANLKGAFFTAVLLIVVSMTVTMYLADEMPLDKQDVDTSGGGGCAVFVDLFKSLRNLPPAMFKVLAVTAVTWLSWFPFIQYNTDWMGREIYHGEPQGTAAKADVYDAGVREGAMGLLFCSVALGVTSFVIPKLCRRLTSKVVWSISNFLVFALMAVMVAVGMVSMRGYRPSLAAGLTGPDPTLKAVALVVFALIGIPQAVLFSVPWAVASEVTAEEGGGQGLAIGVLNIAIVVPQLVIALTAGPIDGAFNKGNTPAFGIGGAFAFICGVLALIWLPKTRGVSNAAVVAGGH
What is the function of this protein?
Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system).  May also transport other glucosides (By similarity).
What are the official names of this protein?
Sucrose transport protein SUT5, Sucrose permease 5, Sucrose transporter 5, OsSUT5, Sucrose-proton symporter 5.
What is the protein family that this protein belongs to?
Belongs to the glycoside-pentoside-hexuronide (GPH) cation symporter transporter (TC 2.A.2.4) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RL19_ALKCK
Sequence: MSNLITEITSEQLRTDHPDFRPGDTLSIHVKVVEGTRERIQVFEGVVIKRRGSGISETFTARKISYGVGVERTFPLHSPKIDKIEVKRYGKVRRAKLYYLRSLRGKKARIKEIRR
What is the function of this protein?
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
What are the official names of this protein?
50S ribosomal protein L19.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL19 family.
Protein: ARLY_THIDA
Sequence: MSTSSTPPQGAWSGRFSEPVSEIVKRYTASIPFDYRLAEFDIQGSLAHAAMLHHVGVLSADDLAAIRGGMGELLEEIRAGRFAWSLDKEDVHLNIEAALTAKIGDAGKRLHTGRSRNDQVATDIRLYLRDAIDRILAGLKACQTSLVDLAEAHADTVMPGFTHLQVAQPVTFGHHLLAYFEMLARDAERMADCRRRVNRLPLGAAALAGTSYPIDRAYVARELGFEAVCENSLDAVSDRDFAIEFAAAAALVMTHLSRLSEELILWMSPRFGFIDLADRFCTGSSIMPQKKNPDVPELVRGKTGRVNGHLVALLTLMKGQPLAYNKDNQEDKEPLFDTVDTLADTLAIYADMLRGVTVKPDAMHAAVMQGFATATDLADYLVKKGLPFRDAHEVVARAVRVADESGRDLADLPLDELQTFSPIIGDDVYALLTLEGSLAARDHFGGTAPAQVRAAVARARGRL
What are the official names of this protein?
Argininosuccinate lyase, ASAL, Arginosuccinase.
What is the protein family that this protein belongs to?
Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TRPD_HAEIE
Sequence: MQHNQLLEQLYSGHSLSTSESTALFNAVIQGELSNEQIAAMLIALKVRGANTEEITGAVAASLQNAKVFPRPDYPFADIVGTGGDGQNTINISTASAIVAASMGAKVAKHGNRSVSSKSGASDVLTALGVNVNVTLEQARQALDEIGVCFLFAQQYHSGFRHVAPVRAALKTHTIFNILGPLINPARPTYHLLGVYAPELVKTYAETAVALEHQHSFVVHGSGLDEVALHGETQVAEIKNGKIEYFTLTPEDFGLKTQSLESLRGGEPQENTQYLTALLQGKGKAEHANAVAANTALLLKLFGYDDLKQNVQNVLAHLVSGKAFETLQKLTTY
What is the function of this protein?
Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
What are the official names of this protein?
Anthranilate phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the anthranilate phosphoribosyltransferase family.
Protein: GATC_XANP2
Sequence: MSVDQATVRRVAHLARISVREDELGHLQNELNAILEFVEQLADLDVSGVEPLTSVVPVELPMREDVVTDGHCPEKVLANAPDAEGGFFTVPKVVE
What is the function of this protein?
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases.  The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Asp/Glu-ADT subunit C.
What is the protein family that this protein belongs to?
Belongs to the GatC family.
Protein: FABZ_ERWT9
Sequence: MTTETHTLKIEEIIELLPHRYPFLLVDRVLEFEESKYLRAVKNVSVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVATVDGKIVCEATMMCARSREA
What is the function of this protein?
Involved in unsaturated fatty acids biosynthesis.  Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
What are the official names of this protein?
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase, (3R)-hydroxymyristoyl-ACP dehydrase, Beta-hydroxyacyl-ACP dehydratase.
What is the protein family that this protein belongs to?
Belongs to the thioester dehydratase family. FabZ subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ENGB_PSEPW
Sequence: MQVKNPILGLCQKATFALSAAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFSLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWARASGMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGLEEAYKVLAGWMELEDKPVA
What is the function of this protein?
Necessary for normal cell division and for the maintenance of normal septation.
What are the official names of this protein?
Probable GTP-binding protein EngB.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
Protein: SRP19_PONAB
Sequence: MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQKTGGADQSLQQGEGSKKGKGKKKK
What is the function of this protein?
Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) (By similarity).  Binds directly to 7SL RNA (By similarity).  Mediates binding of SRP54 to the SRP complex (By similarity).
What are the official names of this protein?
Signal recognition particle 19 kDa protein, SRP19.
What is the protein family that this protein belongs to?
Belongs to the SRP19 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus, nucleolus. Nucleus, nucleoplasm. Note=Although the signal recognition particle complex acts in the cytoplasm, it assembles at least in part in the nucleus and/or the nucleolus. SRP19 nuclear import may be mediated by IPO8/Imp8 and TPNO1/Trn.
Protein: ZN577_HUMAN
Sequence: MKNATIVMSVRREQGSSSGEGSLSFEDVAVGFTREEWQFLDQSQKVLYKEVMLENYINLVSIGYRGTKPDSLFKLEQGEPPGIAEGAAHSQICPGFVIQSRRYAGKDSDAFGGYGRSCLHIKRDKTLTGVKYHRCVKPSSPKSQLNDLQKICAGGKPHECSVCGRAFSRKAQLIQHQRTERGEKPHGCGECGKTFMRKIQLTEHQRTHTGEKPHECSECGKAFSRKSQLMVHQRTHTGEKPYRCSKCGKAFSRKCRLNRHQRSHTGEKLYGCSVCGKAFSQKAYLTAHQRLHTGDKPYKCSDCGRTFYFKSDLTRHQRIHTGEKPYECSECEKAFRSKSKLIQHQRTHTGERPYSCRECGKAFAHMSVLIKHEKTHIRETAINSLTVEKPSSRSHTSLYMSELIQEQKTVNTVPIEMPSSGTPPLLNKSERLVGRNVVIVEQPFPRNQAFVVNQEFEQRISLTNEVNVAPSVINYILYLTDIVSE
What is the function of this protein?
May be involved in transcriptional regulation.
What are the official names of this protein?
Zinc finger protein 577.
What is the protein family that this protein belongs to?
Belongs to the krueppel C2H2-type zinc-finger protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: Y888_HELPY
Sequence: MVLEVKNLSFKYSQKLILDKLSFSVPKNSITSILAPNGSGKTTLLKCLLGLLKPLEETEIKACNKDILPLKPYEKAKLIAYIPQVEYYAFNFSVLDFVLMGKATHLNLFAMPKAKHIKEATSVLERLDLESLKDQGINDLSGGQRQMVLLARSLLQRTPLLLLDEPTSALDLKNQALFFDAIKDEMKKRELSVLVNIHDPNLVARHSTHVVMLKDKKLFLQASTPIAMTSHNLSALYDTPLEAIWHDNKLVVYAL
What is the function of this protein?
Part of a binding-protein-dependent transport system for an iron chelatin.  Probably responsible for energy coupling to the transport system (Potential).
What are the official names of this protein?
Probable iron chelatin transport ATP-binding protein HP_0888.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: Y694_STAES
Sequence: MRIYINEIKLKDDGVYCFSEESTEGLEEVGQMLVDSDNYGFAYLLDDGQSYSYLIFVQETWSMLHENRDKRIIINNHLELKHFQEELDYVLNNIEGNNNYGKEFVSAVEKTFELE
What are the official names of this protein?
UPF0738 protein SE_0694.
What is the protein family that this protein belongs to?
Belongs to the UPF0738 family.
Protein: NRDR_ECOK1
Sequence: MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
What is the function of this protein?
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.
What are the official names of this protein?
Transcriptional repressor NrdR.
What is the protein family that this protein belongs to?
Belongs to the NrdR family.
Protein: D1861_ARATH
Sequence: MAKTALTPPASGSEVPRSGTPGDASGNKPQTDATGVSATDTASQKRGRGRPPKAKSDSSQIGAVSAKASTKPSGRPKRNVAQAVPSTSVAAAVKKRGRAKRSTVTAAVVTTATGEGSRKRGRPKKDDVAAATVPAETVVAPAKRRGRKPTVEVAAQPVRRTRKSTSVAPVAANVGDLKKRTALLQKKVKEAAAKLKQAVTAIDEVQKLADGM
What is the function of this protein?
May bind DNA.
What are the official names of this protein?
Putative DNA-binding protein At1g48610, AT-hook DNA-binding motif-containing protein At1g48610.
What are the subcellular locations of this protein?
Nucleus.
Protein: SAPK1_ORYSJ
Sequence: MERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEHVQREIMNHRSLKHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVTPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILSVQYSIPDYVRVSADCRHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSMQLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIENSGDFVCAL
What is the function of this protein?
May play a role in signal transduction of hyperosmotic response.
What are the official names of this protein?
Serine/threonine-protein kinase SAPK1, Osmotic stress/abscisic acid-activated protein kinase 1, stress-activated protein kinase 1, OsSAPK1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
Protein: O264_CONBE
Sequence: MEKLTILLLVAAVLMSTQALIQSDGEKRQQAKINFLSXRKSTAESWWEGECKGWSVYCSWDWECCSGECTRYYCELW
What are the official names of this protein?
Conotoxin Bt6.6, Conotoxin BeB54.
What is the protein family that this protein belongs to?
Belongs to the conotoxin O2 superfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: CARB_BACAA
Sequence: MPKRLDINTILVIGSGPIVIGQAAEFDYSGTQACQSLKEEGYKVILVNSNPATIMTDTATADKVYIEPLTLEFVSRIIRKERPDAILPTLGGQTGLNMAVELAKSGVLEECGVEILGTKLSAIEQAEDRDLFRTLMQELNEPTPPSEIIHNLDEAYGFVNEIGYPVIVRPAFTLGGTGGGICHNEEELIEIVTSGLKHSPVTQCLLEKSIAGCKEIEYEVMRDSNDNAIVVCNMENIDPVGVHTGDSIVVAPSQTLSDREYQMLRNTSLRIIRALGIEGGCNVQLALDPYSFQYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEIVNPVTQKTYACFEPALDYVVSKIPRWPFDKFESANRTLGTQMKATGEVMSIGRNLEESLLKAVRSLELGIYHLELDHLKELDKETMKKRIIKADDERLFIVAEAIRQGVTKEEINEWCEMDFFFLQKVENIVNMEREVKANVGNMEVLQTAKEMGFSDHYIAAAWNKTEREIYDMRKENNMTPVFKMVDTCAAEFESATPYYYSTYADENELIVTDRKSVVVLGSGPIRIGQGVEFDYATVHSVWAIKEAGYEAIIINNNPETVSTDFSISDKLYFEPLTIEDVMHIIDLEKPEGVIVQFGGQTAINLAAKLEEHGVKILGTSLEDLDRAEDRDKFEAALTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSYVLGGRAMEIVYRQEELLHYMKNAVKVHADHPVLIDRYMVGKEIEVDAISDGENVFIPGIMEHIERAGVHSGDSIGVYPPQSLSEKLKEQIIEHTIALGKGLNIVGLLNIQFVVFKDQVYVIEVNPRASRTVPFLSKITGVPMANVATKVILGQDLVEQGYGTGYHPEEKEVYVKAPVFSFAKLRSVDTTLGPEMKSTGEVMGKDLTLEKALYKGLVASGINIPTHGSVIITVADKDKEEAMEIAKRFHEIGYNLLATAGTAQSLTEQNIPVQVVNKIDSEDYNLLDIIRQGKAQFVINTLTKGKQPARDGFRIRRESVENGVACLTSLDTTRAILRVLESMTFSAHSMKEITQTKRHEVVHA
What are the official names of this protein?
Carbamoyl-phosphate synthase large chain, Carbamoyl-phosphate synthetase ammonia chain.
What is the protein family that this protein belongs to?
Belongs to the CarB family.
Protein: 3SDC7_OPHHA
Sequence: MKTLLLTLVVVTIVCLDLGYTRKCLNTPLPLIYTTCPIGQDKCVKMTIKKLPSKYDVIRGCIDICPKSSADVEVLCCDTNKCNK
What is the function of this protein?
Acts as a beta-blocker by binding to beta-1 and beta-2 adrenergic receptors (ADRB1 and ADRB2).  It dose-dependently decreases the heart rate (bradycardia), whereas conventional cardiotoxins increases it.  At 100 mg/kg, intraperitoneal injection into mice provokes labored breathing, impaired locomotion, lack of response to external stimuli, and death (after 30 min).
What are the official names of this protein?
Beta-cardiotoxin CTX27, OH-27.
What is the protein family that this protein belongs to?
Belongs to the snake three-finger toxin family. Short-chain subfamily. Aminergic toxin sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: SRSF8_HUMAN
Sequence: MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSPPRVSKRKSKSRSRSKRPPKSPEEEGQMSS
What is the function of this protein?
Involved in pre-mRNA alternative splicing.
What are the official names of this protein?
Serine/arginine-rich splicing factor 8, Pre-mRNA-splicing factor SRP46, Splicing factor SRp46, Splicing factor, arginine/serine-rich 2B.
What is the protein family that this protein belongs to?
Belongs to the splicing factor SR family.
What are the subcellular locations of this protein?
Nucleus.
Protein: MNME_PROMM
Sequence: MMSSPIPHQQTIAAVATAVAPGQGGIAVVRLSGPAAEVVGRSVVSIPGQQLWVSHRVLYGHVMDESGKERIDEVLVLLMKGPRSFTGEDVVEIHCHGGLMAVQRVLERVLAQPHVRRALPGEFSQRAVLNGRLDLTQAEAISELVAARSRRAAQLAMTGVDGGIQRRITSLRERLLDQLSELEARVDFEEDLPPLDGAELLLELQCVRRELEQLVEDAKRGDVLRQGLQVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDVLESEIVLEGVPITLVDTAGIRATQDALEQLGIDRSHQALAAADVAVLVFDLSLGWTADDAALLAQIPDDLPRLLVGNKADLQPASMAASLMVASLGNEVDGKTVDVMLSALTGQGEEALIKAVLKTCGASEAQGLVVALNQRQQDLAAAAAIALARTQEAAEHQLPWDFWTIDLRQAISSLGEITGEEITEAVLDRIFSRFCIGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LDCA_ECOLI
Sequence: MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM
What is the function of this protein?
Releases the terminal D-alanine residue from the cytoplasmic tetrapeptide recycling product L-Ala-gamma-D-Glu-meso-Dap-D-Ala.  To a lesser extent, can also cleave D-Ala from murein derivatives containing the tetrapeptide, i. e.  MurNAc-tetrapeptide, UDP-MurNAc-tetrapeptide, GlcNAc-MurNAc-tetrapeptide, and GlcNAc-anhMurNAc-tetrapeptide.  Does not act on murein sacculi or cross-linked muropeptides.  The tripeptides produced by the LcdA reaction can then be reused as peptidoglycan building blocks; LcdA is thereby involved in murein recycling.  Is also essential for viability during stationary phase.
What are the official names of this protein?
Murein tetrapeptide carboxypeptidase, LD-carboxypeptidase A, Muramoyltetrapeptide carboxypeptidase.
What is the protein family that this protein belongs to?
Belongs to the peptidase S66 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RR4_GOSBA
Sequence: MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRPGKKSQYRIRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPQARQLVNHRHILVNGRTVDIPSYRCKPRDIISARDEQKSRTLIQNYLDSSTNEELPKHLTFHTLQYKGLVNQIIDRKWVGLKINELLVVEYYSRQT
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S4, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: NADE_STRE4
Sequence: MTLQEDIIRQLEVKAVIDPKQEIRQSVDFLKAYLLKHPFLKTYVLGISGGQDSSLAGKLAQMAIEELRAETGDEQYQFIAVRLPYGVQADEADAQKALAFIQPDQALTVNIKEAVDGQLRALEAAGLEISDFNKGNIKARQRMISQYAIAGQTAGAVIGTDHAAENVTGFFTKFGDGGADILPLFRLTKRQGKALLKVLKADPSLYEKVPTADLEDKKPGLADEVALGVTYQEIDDYLEGHTISAEAQARIEDWWHKGQHKRHLPITIFDDFWK
What is the function of this protein?
Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD.  Uses ammonia as a nitrogen source.
What are the official names of this protein?
NH(3)-dependent NAD(+) synthetase.
What is the protein family that this protein belongs to?
Belongs to the NAD synthetase family.
Protein: TOLB_BURCM
Sequence: MRLMTKLGFRALVASCLIAAGAAANAQVNVLITGVGSTQFPIATANFANEAGLPQQVTSIVRADLARSGKFTNIDAGSTPVPETASVDLGAWKAKGANAFVAGSVNREANGQYKVNFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGNRYQLQISDSDGQNARIALSSTEPIISPAWSPSGTKVAYVSFERKKPIVYIHDLPTGRRYMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTEPYYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRISPDGKLLAYISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGSAPPQILSVQGGSVREPSWGPFMQ
What is the function of this protein?
Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
What are the official names of this protein?
Tol-Pal system protein TolB.
What is the protein family that this protein belongs to?
Belongs to the TolB family.
What are the subcellular locations of this protein?
Periplasm.
Protein: MOAA_HAEIE
Sequence: MQSIPIKNVGESRLVDPFQRQYYYLRLSITDQCNFRCTYCLPDGYQPEANKPSFLTLKEITHLAQAFAEMGTEKIRLTGGEPTLRKDFISIAESIANIEGIRQLAVTTNGYRMAKDVADWKKVGITSINVSVDSLDPKMFHQITGINKFDDVMRGIDRAFEAGYNKVKVNSVLMKNLNDKEFEQFLVWVKDRPIQMRFIELMQTGEMDSFFDRYHLSGQVLADKLLKNGWILQHKSHTDGPAKVFTHSDYAGEIGLIMPYEKNFCASCNRLRVSAKGKLHLCLFGEEGIELRDLLQSHEQQAILQARIFAALQGKREHHYLHIGDTGVRNHLASIGG
What is the function of this protein?
Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
What are the official names of this protein?
GTP 3',8-cyclase, Molybdenum cofactor biosynthesis protein A.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily. MoaA family.
Protein: SYE_STRTD
Sequence: MAKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFIIRIEDTDRKRHVEDGERSQLDNLRWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELAAERERQEAAGETPRYINEFLGMTEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDIVKGDIEFEGGNIGGDWVIQKRDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLITNSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQKKLDWMSNDYIKHADFDKVFALCKPFLEEAGRLTDKAEKLVELYKPQMTAAEEIVPLTDLFFEDFPELTAAEKEVMAGETVPTVLEAFKAKLEAMSDDEFVTENIFSQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPETIFLLGREKSIKHIDQVLATL
What is the function of this protein?
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
What are the official names of this protein?
Glutamate--tRNA ligase, Glutamyl-tRNA synthetase, GluRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EXOC5_ORYSJ
Sequence: MPSATDPPAALPLTLDLDDFKGDFSFDALFGTLVDELLPEFRGDDAPGAPPPPPPVLGAAPPVFPAVDELLGLFKHSCKELVDLRRQIDKRLQNLKKEVATQDAKHRKTLGELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSAESQRETASQTIDLIKYLMEFNSTPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDVGRHGVPSAVGSANASRGLEVAVANLQEYCNELENRLLARFDTASQRREMSTMAECAKILSQFNRGTSAMQHYVATRPMFIDVDIMSIDIQVVLGEEGPQADHICIAEGLSVLYKEIADTVRREATTIMAVFPSPNEVMSILVQRVLEQRVTAILDKLLIKPSLANLPPIEEGGLLHYLRVLAVAYDKTKELAKELQSISCGDLDIEGLTESIFVSHKDEYTEFEQASLRQQYQSKMAELRAEAKQQSESTGTIGRSNGAAVTTSLQQQISVTVVTEFVRWNEEAISRCTLLFSQPATVAANVRSIFACLLDQVSQYLTEGLDHARESLNHAATQRDRYVIGTSVSRRVATAAANAAEAAAAAGESSFRSFMIAVQRCASSVAILQQYFSNTISRLLLPVDGAHPSACEDMGSAVSVVEAAAHKGLLQCIDTVMSEVERLLSSEQKATDYRTPDDGAAPDHRPTNACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRLHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYKTAKIASMLNSIMAE
What is the function of this protein?
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
What are the official names of this protein?
Exocyst complex component 5, Exocyst complex component Sec10.
What is the protein family that this protein belongs to?
Belongs to the SEC10 family.
Protein: BCHB_CERS5
Sequence: MKLTLWTYEGPPHVGAMRVATGMTGLHYVLHAPQGDTYADLLFTMIERRGKRPPVSYTTFQARDLGSDTAEVFQQACRDAYERFQPQAIMVGASCTAELIQDDTGGLADALSLPVPVVHLELPSYQRKENFGADESFLQICRKLAKPTERTAQVSCNILGPTALGFRHRDDVTEITQLLNAMGIAVNVVAPMGSSPADIARLGAAHFNVLLYPETAESAARWAEKTLKQPYTKVVPIGVGATRDFIAEVAKLAGVEPKADESRLRQPWWSASVDSTYLTGKRVFLFGDATHVIAAARIARDEVGFEVVGMGCYNREYARPLRAAAKDYGLEALITDDYLEVEEAIQALAPELILGTQMERHIAKRLGIPCAVISAPVHVQDFPARYSPQMGFEGANVIFDTWIHPLTMGLEEHLLTMFREDFEFHDEAGPSHHGGKAVPASAPRAEATADEGSTPEEAVPPVAAEATSGEIVWLSDAEKELKKIPFFVRGKARRNTEKFAAEKGLTRISIETLYEAKAHYAR
What is the function of this protein?
Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide).  This reaction is light-independent.  The NB-protein (BchN-BchB) is the catalytic component of the complex.
What are the official names of this protein?
Light-independent protochlorophyllide reductase subunit B, DPOR subunit B, LI-POR subunit B.
What is the protein family that this protein belongs to?
Belongs to the ChlB/BchB/BchZ family.