PharMolix/UniProtQA huggingface dataset:
Protein: GBPA_ALIFM
Sequence: MNKSSTKTLIALSMMAVSSGVSAHGYVSETNDGIAGSRAALCKFPTSDTQEKNRDCGAVQWEPQSVEGPEGFPEKGPADGQIAGAGLVQFSELNEQTADRWVKRPITAGAQTFEWTFTANHVTRTWKYYMTKQNWNPNAVLTRDSFDLTPFCELEYNMEKPPLYPNTFSHECIVPEREGYQVILAVWDVGDTAAAFYNVIDVKFDGNGGVVDPTWSQGGQINPTRDLNVGERVFTRVFDASGENVSLSTELVIENETQGQANNWTHALATKINKEQQNIGAGQLNDKGEFSPQYGPNPVYLKAGSGLKSVEIGYQLETVEPVYHLDIEGLASEYTIGDSATELDLSLYATGDMNVELTVYNHGKEALANTNVTLKDGDAKSVVMALSKSEKGHHMLVSRIKNMDGELIKQDMSDFHLVEEAVTPPPSGDFDFVFPEGVKDYKAGTKVLAEDSNVYQCKEFPYSGYCVQWTETATNFAPGVGSDWSMAWDKVN
What is the function of this protein?
Probably interacts with GlcNAc residues.  May promote attachment to both epithelial cell surfaces and chitin.
What are the official names of this protein?
GlcNAc-binding protein A.
What is the protein family that this protein belongs to?
Belongs to the GbpA family.
What are the subcellular locations of this protein?
Secreted.
Protein: CINAL_MYCMM
Sequence: MAVSARAGIVVTGTEVLTGRVQDRNGPWIADQLLELGVELAHITICGDRPADIEAQLRFMADQDLDLIITSGGLGPTADDMTVEVVARFCGRELILDAELEDTIANILKRLMARNPGFDPGNFDSVRAANQKQAMIPAGAQVINPVGTAPGLVVPGKPAVMVLPGPPRELQPMWHSAIQMPGAQEAIAGRTTYRQETIRMFGLPESGLAETLRSAETTIPDFGALEITTCLRRGEIEMVTRYEPGAADTYAQVARLLRDRHGDQIYSEDGSQVDDLVARLLADRRIATAESCTAGLLAARLTDRPGSSGYVMGGVVSYSNEAKAELLGVDPALIEMHGAVSEPVAQAMAAGALQRFGADTAVAITGIAGPGGGTEQKPVGTVCFCVLVGDGRNVTRTLRLPGNRSDIRERSTTVAMHLLRRALSE
What are the official names of this protein?
CinA-like protein.
What is the protein family that this protein belongs to?
Belongs to the CinA family.
Protein: DEOD_BACAA
Sequence: MSVHIEAKQGEIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIFTGEETTSEERQTTFNEMIEIALDAAIQQ
What is the function of this protein?
Catalyzes the reversible phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
What are the official names of this protein?
Purine nucleoside phosphorylase DeoD-type, PNP.
What is the protein family that this protein belongs to?
Belongs to the PNP/UDP phosphorylase family.
Protein: DUT_DICT6
Sequence: MVKVLIERIDKDLPLPNYATSGSAALDLYSRIDFELPPFKEIGGGLVIPTGIKIALPEGYLAFVLPRSGLAAKEGISILNTPGLIDSDYRGEIFVNLINFSNKTFYGKRGMRIAQLLVLQYAHVMWEEVSQLPQTERGEGGLGSTGL
What is the function of this protein?
This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
What are the official names of this protein?
Deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTPase, dUTP pyrophosphatase.
What is the protein family that this protein belongs to?
Belongs to the dUTPase family.
Protein: PSBC_PSINU
Sequence: METLFNGTLSLGGRDQETTGFAWWAGNARLTNLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLVSSAVLGFGGIYHALIGPETLEESFPFFGYVWKDKSKMTTILGIHLILLGAGAFLLVLKSVYFGGVYDTWAPGGGDVRKITNLTLSPSILFGYLLKSPFGGEGWIISVDNLEDIIGGHVWLGSICIFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSIFGFTACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGASIGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWDLRAPWLEPLRGPNGLDLNKLRRDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDTEPVLSMTPLN
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII).  It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII.  PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.
What are the official names of this protein?
Photosystem II CP43 reaction center protein, PSII 43 kDa protein, Protein CP-43.
What is the protein family that this protein belongs to?
Belongs to the PsbB/PsbC family. PsbC subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: YDJC_HUMAN
Sequence: MSRPRMRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGRPVGPARRGASSLLGPEGFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPLERGVGGCTWLEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTCGRHMSAHRVSGALARVLEGTLAGHTLTAELMAHPGYPSVPPTGGCGEGPDAFSCSWERLHELRVLTAPTLRAQLAQDGVQLCALDDLDSKRPGEEVPCEPTLEPFLEPSLL
What is the function of this protein?
Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides.
What are the official names of this protein?
Carbohydrate deacetylase.
What is the protein family that this protein belongs to?
Belongs to the YdjC deacetylase family.
Protein: ATPB_BREBN
Sequence: MANGRVVQVMGPVVDVEFDRGHLPAIYNAIKIQHKAQSAGERDIDLTVEVATHLGDNLVRTVAMSSTDGLVRGMEAVDTGAAISVPVGAITLGRVFNVLGEPIDLQELGQVDRRDPIHRKAPEFVDQATTVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDAGVLPKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEEGRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERSIAELGIFPAVDPLASTSRALAPDIVGQEHYDVARSVQKILQRYKELQDIIAILGMDELSDDDKQVVGRARRIQRFLSQSFHVAEQFTGNPGQYVPLKETVRSFKEILEGKHDHLPEGAFLYVGTIEEAVEKAKKMA
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: RL19_DEHM1
Sequence: MEETVNNQETPETSEEETADEETVAVENTAAGKVLPSFGPGDTIKVHARIKEGDKERIQMFQGVVLKVKQAADGGNFTVRRISYGVGVERTFPFLSPNVTKVEVIKRGRVRRARLFYLRKLSGKAARIKEVKQTPS
What is the function of this protein?
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
What are the official names of this protein?
50S ribosomal protein L19.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL19 family.
Protein: PSBI_ORYSJ
Sequence: MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGRDE
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly.  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Photosystem II reaction center protein I, PSII-I, PSII 4.8 kDa protein.
What is the protein family that this protein belongs to?
Belongs to the PsbI family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: LFR_ARATH
Sequence: MQKRELGKSGGNSGGSSGPPAKRGRPFGSTSANSAAAAAAAAAADAMSPSALLGPSLLVHNSFVEQNNRRIVLALQSGLKSEVTWALNTLTLLSFKEKEDIRRDVMPLAKIAGLLDALLLIIDDWRDIALPKDLTRGTRVRTLGTNASVTGFGNEYDALASIQPPGSGIGSSAAEALGKKSTGKHQSSQWWMEEDGLFNLDDEGRSEKQMCAIAASNVIRNFSFMPDNEVVMAQHRHCLETVFQCIHDHMTEDEELVTNSLETIVNLAHLMDLRIFSSLKQSYININEKKAVQAVVGILNSSVKAWNCAAAELLGRLIINPDNEPFISPLIPQIHKRLIDLLSIQAVDAQAAAVGALYNLVEVNMDCRLKLASERWAVDRLLKVIKTPHPVPEVCRKAAMILENLVSEPQNRGLLLAYENAFAELLFQEGKYSDSFARILYELTARSNSRVASARGIWGM
What is the function of this protein?
Involved in leaf and flower development (PubMed:18846319).  Plays roles in leaf development partly by associating with AS2 and repressing KNAT1/BP transcription (PubMed:29775508).  Required for the formation of anther cell layers and normal expression of genes that regulates anther development (PubMed:22461668).
What are the official names of this protein?
Armadillo repeat-containing protein LFR, Protein LEAF AND FLOWER RELATED.
Protein: CPDR_BRUA2
Sequence: MKRILLAEDDNDMRRFLVKALEKAGYHVTHFDNGASAYERLQEEPFSLLLTDIVMPEMDGIELARRATEIDPDLKIMFITGFAAVALNPDSDAPRDAKVLSKPFHLRDLVNEIEKMLIAA
What is the function of this protein?
Component of a regulatory phosphorelay system that controls B. abortus cell growth, division, and intracellular survival inside mammalian host cells.  This signaling pathway is composed of CckA, ChpT, CtrA and CpdR.  CpdR is a response regulator substrate of ChpT.  Unphosphorylated CpdR controls steady-state levels of CtrA in the B. abortus cell, likely via CtrA destabilization and activation of its proteolysis.
What are the official names of this protein?
Response regulator receiver protein CpdR, Phospho-receiver protein CpdR.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DHYS_METTH
Sequence: MLILNVNHMNITQGMGVAELIEEMGRSGVLGAGRVHRATKLLRGMIDDLEMAIFMSVAGPLVPGGMRRIIRDLIDDGTISALITSGANLTHDLLEAFGGAHYRDYGFDDEKLHQEGIGRIGDVYTRSEDFEVFESENQEIFSSIFSAKPHISIQELIHEIGGHLDDDMSIIRTAHLRGVPIYAPGLIDSMLGLQLWMYTQDNRICLDAVKDMHSLSDLVFSHERIGAIILGGGLPKHYTLASTLLRGGVDAAVQITMDRSETGSLSGAPLEEAKSWAKAQAGSNLVTVVGDATALFPVILAGALSEL
What is the function of this protein?
Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.
What are the official names of this protein?
Probable deoxyhypusine synthase, DHS.
What is the protein family that this protein belongs to?
Belongs to the deoxyhypusine synthase family.
Protein: HIS82_PSEPF
Sequence: MSGNFLALAQPGVQQLSPYVPGKPVDELARELDLDPASIVKLASNENPLGASPKALAAIREALDELTRYPDGNGFALKSLLAEQCRVELNQVTLGNGSNDILELVARAYLAPGLNAVFSEHAFAVYPIATQAVGAQAKVVPAKEWGHDLPAMLAAIDANTRVVFIANPNNPTGTWFGAEALDDFLQDVPEHVLVVLDEAYIEYAEGSDLPDGLDFLAAYPNLLVSRTFSKAYGLAALRVGYGLSTPVVADVLNRVRQPFNVNSLALAAACAALKDEEYLAQSRQLNESGMQQLEAGFRELGLSWIPSKGNFICVDLGQVAAPVFQGLLREGVIVRPVANYGMPNHLRVTIGLPAENSRFLEALRKVLARG
What are the official names of this protein?
Histidinol-phosphate aminotransferase 2, Imidazole acetol-phosphate transaminase 2.
What is the protein family that this protein belongs to?
Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
Protein: LHX4_MOUSE
Sequence: MMQSAAVPAEGAVKGLPEMLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVSDSELSFREDQILSELGHTNRIYGNVGDVTGGQLMNGSFSMDGTGQSYQDLRDGSPYGIPQSPSSISSLPSHAPLLNGLDYTVDSNLGIIAHAGQGVSQTLRAMAGGPTSDLSTGSSVGYPDFPTSPASWLDEMDHPPF
What is the function of this protein?
May play a critical role in the development of respiratory control mechanisms and in the normal growth and maturation of the lung.  Binds preferentially to methylated DNA (By similarity).
What are the official names of this protein?
LIM/homeobox protein Lhx4, LIM homeobox protein 4.
What are the subcellular locations of this protein?
Nucleus.
Protein: GALT2_MOUSE
Sequence: MRRRSRMLLCFALLWVLGIAYYMYSGGGSALAAGGGGAGRKGDWNDIDSIKKKDLHHSRGDEKAQGVETLPPGKVRWPDFNQEAYVGGTMVRSGQDPYARNKFNQVESDKLHMDRGIPDTRHDQCQRKQWRVDLPATSVVITFHNEARSALLRTVVSVLKRSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKHFYYAAVPSARNVPYGNIQSRLELRKKLGCKPFKWYLDNVYPELRVPDHQDIAFGALQQGTNCLDTLGHFADGVVGIYECHNAGGNQEWALTKEKSVKHMDLCLTVVDRSPGSLIRLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCGPALSQQWKFSLNLQQ
What is the function of this protein?
Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.  Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b.  Probably involved in O-linked glycosylation of the immunoglobulin A1 (IgA1) hinge region (By similarity).  Involved in O-linked glycosylation of APOC-III, ANGPTL3 and PLTP.  It participates in the regulation of HDL-C metabolism (PubMed:27508872).
What are the official names of this protein?
Polypeptide N-acetylgalactosaminyltransferase 2, Polypeptide GalNAc transferase 2, GalNAc-T2, pp-GaNTase 2, Protein-UDP acetylgalactosaminyltransferase 2, UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 2.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.
What are the subcellular locations of this protein?
Golgi apparatus, Golgi stack membrane; Single- pass type II membrane protein. Secreted. Note=Resides preferentially in the trans and medial parts of the Golgi stack. A secreted form also exists.
Protein: CXE7_ARATH
Sequence: MDSVIAFDRSPMFRVYKSGRIERLLGETTVPPSLTPQNGVVSKDIIHSPEKNLSLRIYLPEKVTVKKLPILIYFHGGGFIIETAFSPPYHTFLTSAVAAANCLAISVNYRRAPEFPVPIPYEDSWDSLKWVLTHITGTGPETWINKHGDFGKVFLAGDSAGGNISHHLTMRAKKEKLCDSLISGIILIHPYFWSKTPIDEFEVRDVGKTKGVEGSWRVASPNSKQGVDDPWLNVVGSDPSGLGCGRVLVMVAGDDLFVRQGWCYAEKLKKSGWEGEVEVMETKNEGHVFHLKNPNSDNARQVVKKLEEFINK
What is the function of this protein?
Carboxylesterase acting on esters with varying acyl chain length.
What are the official names of this protein?
Probable carboxylesterase 7, AtCXE7.
What is the protein family that this protein belongs to?
Belongs to the 'GDXG' lipolytic enzyme family.
Protein: COAD_THEP3
Sequence: MKTAIYPGSFDPVTYGHIDIIERGANLFDKLIVAVLLNPSKKPLFSVEERVELLKAVTYDISNVEIDYFDGLLVDYAKKVKANAIIKGLRMVSDFEYEFQMALINKKLNPSLETIFLMTNAKYGYLSSSVVKEIAQFGGCLSEFVPDIVAQKLMEKFSR
What is the function of this protein?
Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
What are the official names of this protein?
Phosphopantetheine adenylyltransferase, Dephospho-CoA pyrophosphorylase, Pantetheine-phosphate adenylyltransferase, PPAT.
What is the protein family that this protein belongs to?
Belongs to the bacterial CoaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YG1Y_YEAST
Sequence: MKLHFCSQAASSFPSPNPSNFLLPVASCLIPALKRLRTGYCPNITLGFSFQKLCIPDTSMCNFPSAPCTKPSERRCLLEFKARKGYKNRNGPKAEKRRPYVRAHAKW
What are the official names of this protein?
Putative uncharacterized protein YGR051C.
Protein: HXA3A_DANRE
Sequence: MQKATYCDGSAIYSGLPYQSANGLGYDASQQQYLQALHAESEYHRPACSLQSPGISAGLHTSNEMSEVCQQINGTQATVTDTSDNKQPPTAPSGPSSPSSLNQIPNIDSAAKNPVHVSPTPSTRKHIFPWMKESRQNTKQKSCSIISVESCAGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGLGMMPSPGAQSPHSPVSLSSGGGGGGGSAYLSSMHSLVNSVTYDSPSPASYNKPQSNTYSLPTSYPPLNNCPPPQKRYQGTGTATPEYDTHHIQGNNNYGTQVQGSPVYVSGGGGYSDSLVGMGASVFGLTHLPHPSQGNIDYNGAITMGNSHQQGACDSNPCTFTDLTPHYSQGRIQEAPKLTHL
What is the function of this protein?
Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.
What are the official names of this protein?
Homeobox protein Hox-A3a.
What is the protein family that this protein belongs to?
Belongs to the Antp homeobox family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL11_DESAH
Sequence: MAKKVMALIKLQVEAGKANPSPPIGPALGQHGVNIMDFCKAFNARTANDAGSIIPVVITVYQDRSFTFITKTPPASMLLKRAAKISKGSGVPNRDKVGKVTHDQLVEIATLKMEDLNAADVDAAVSIIAGTARSMGIEVV
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL11 family.
Protein: LAMP5_DANRE
Sequence: MEFQLLLLCSVWALGVCAEQEVENLSGLSTNPERDIFVVRENGTTCLMAEFAVRFLIPYDVLALNGIDLITEQTSVAIPRGAQIAGKCGPSESELQISWAAQAFNFHIYFSKEKRVQGSDGKAPEAEVWKINRVQLVYDTSENTHFINAYNPGKHTASTHRLSALVTPAGRSYVCAAQQTLTLISSDHQKGVTVSIYDIQIQPFDINADFVFSEPYKCVTDQREQLEQTLPLVLGLILGLIIVITISVYHFHLKLNAAHTQQPTLPRDRSLYKNM
What is the function of this protein?
Plays a role in short-term synaptic plasticity in a subset of GABAergic neurons in the brain.
What are the official names of this protein?
Lysosome-associated membrane glycoprotein 5, Lysosome-associated membrane protein 5, LAMP-5.
What is the protein family that this protein belongs to?
Belongs to the LAMP family.
What are the subcellular locations of this protein?
Cytoplasmic vesicle membrane; Single-pass type I membrane protein. Cell membrane; Single-pass type I membrane protein. Cell projection, dendrite. Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane; Single-pass type I membrane protein. Cell projection, growth cone membrane; Single-pass type I membrane protein. Early endosome membrane; Single-pass type I membrane protein. Recycling endosome. Endoplasmic reticulum-Golgi intermediate compartment membrane; Single-pass type I membrane protein. Endosome membrane; Single-pass type I membrane protein.
Protein: PSBU_SYNY4
Sequence: MLNAVDAKLTTDFGQR
What is the function of this protein?
Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
What are the official names of this protein?
Photosystem II 12 kDa extrinsic protein, PS II complex 12 kDa extrinsic protein, PSII-U.
What is the protein family that this protein belongs to?
Belongs to the PsbU family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side. Note=Associated with photosystem II at the lumenal side of the thylakoid membrane.
Protein: CPSF6_PONAB
Sequence: MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPTGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASVGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
What is the function of this protein?
Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs.  CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals).  Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation.  The CFIm complex acts as a key regulator of cleavage and polyadenylation site choice during APA through its binding to 5'-UGUA-3' elements localized in the 3'-untranslated region (UTR) for a huge number of pre-mRNAs.  CPSF6 enhances NUDT21/CPSF5 binding to 5'-UGUA-3' elements localized upstream of pA signals and promotes RNA looping, and hence activates directly the mRNA 3'-processing machinery.  Plays a role in mRNA export.
What are the official names of this protein?
Cleavage and polyadenylation specificity factor subunit 6.
What is the protein family that this protein belongs to?
Belongs to the RRM CPSF6/7 family.
What are the subcellular locations of this protein?
Nucleus. Nucleus, nucleoplasm. Nucleus speckle. Cytoplasm. Note=Shuttles between the nucleus and the cytoplasm in a transcription- and XPO1/CRM1-independent manner, most probably in complex with the cleavage factor Im complex (CFIm). Colocalizes with PSPC1 in punctate subnuclear structures often located adjacent to nuclear speckles, called paraspeckles, and corresponding to interchromatin granules-associated zones (IGAZs). Distribution in speckles and paraspeckles varies during the cell cycle. Associates at sites of active transcription on nascent perichromatin fibrils (PFs) and perichromatin granules. Nuclear import is mediated via interaction with TNPO3 independently of CPSF6 phosphorylation status.
Protein: RBP1_MEDTR
Sequence: MADGYWNRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEMHYLSREEDRSGHPMVKDSKTIGSAYDRYLQGQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPFVGYREVRLVSKEAKHRGDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQFSRYPGPRSGGGPRSSGPPRGGHGSRGRR
What is the function of this protein?
RNA-binding protein interacting with the enod40 RNA.
What are the official names of this protein?
RNA-binding protein 1, MtRBP1.
What are the subcellular locations of this protein?
Nucleus speckle. Cytoplasmic granule. Note=Exported into cytoplasmic granules during nodule development. Relocalizes to cytoplasmic granules when associated with enod40 RNA.
Protein: VSIG8_MOUSE
Sequence: MGVRGALHLLLVCLSPALLSAVRINGDGQEVMYLAEGDNVRLGCPYLLDPEDLGTNSLDIEWMQVNSEPSHRENVFLTYQDKRIGHGNLPHLQQRVRFAASDPSQYDASINLMNLQVSDTATYECRVKKTTMATRKVIVTVQARPAVPMCWTEGHMSKGNDVVLKCFANGGSQPLSYKWAKISGHSHPYRAGAYHSQHSFHSELSYQESFHSTINQGLGNGDLLLKGINADDDGLYQCTVANHVGYSVCVVEVKVSDSQRVGMIVGAVLGSLLMLACLALGIWGLICCCCGGGGAGGARGAFGYGVGGGVGGGACGDLASEIRVDAEAPGCKASGRGSRVTHLLGYPTQNVSRSLRRKYAPPPCGGPEDVALVPRTASASCEAGPSPVYIKVKSAEPADCADCAQVEQRSCKDGLLV
What are the official names of this protein?
V-set and immunoglobulin domain-containing protein 8.
What are the subcellular locations of this protein?
Membrane; Single-pass type I membrane protein.
Protein: CLPX_BURMA
Sequence: MADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAAAGVEASLSKSDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKKDDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERDAGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFAMERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTLKGVSKVIIDDNVIEGDGKPLLIYEDTPKVAGSN
What is the function of this protein?
ATP-dependent specificity component of the Clp protease.  It directs the protease to specific substrates.  Can perform chaperone functions in the absence of ClpP.
What are the official names of this protein?
ATP-dependent Clp protease ATP-binding subunit ClpX.
What is the protein family that this protein belongs to?
Belongs to the ClpX chaperone family.
Protein: UREF_COREF
Sequence: MESTRMTRTLAAMQLMDSALPTGAFSHSHGFETYLHRGVIHDASSFGVWLQMFIQQQLTFTDAVVIREVFRSTSLKRVGELDQLITAQAVPEQIRTAGKTMGIRMLEIAEQGYPDPALIWYRREVDQRTLSGHPAIVWALVARALDVAEDEAVAQHLYATSMSLIHNAVRAVPFGQNAGQHLIRQAQEWVTAAVGNSADIEFDDIGSITPGLEIAQMQHENQRARMFMS
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreF.
What is the protein family that this protein belongs to?
Belongs to the UreF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: T2EB_XENLA
Sequence: MDPALLRDRELFKKRALTTPAVEKRPSASSESSKKKRAKLELSSTSGSKPSSDGSNGSFNLKSLSGSSGYKFGVLAKIVNYMKTRHQRGDTYPLTLEEILDETQHLDIGIKQKQWLMSEALVNNPKIEIIDGKYAFKPKYNLKDKKALLRLLDKHDQRGLGGILLEDIEEGLPNAQKAIKALGDQIVFVTRPDKKKILFYNDKSCQFTVDEEFQKLWRSVPVDSMDDEKIEEYLKRQGISSMQESGPKKIIPVQKRKKATSQRRRFKTHNDHLAGVLKDYTDVASGKP
What is the function of this protein?
Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH.  Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
What are the official names of this protein?
General transcription factor IIE subunit 2, Transcription initiation factor IIE subunit beta, TFIIE-beta.
What is the protein family that this protein belongs to?
Belongs to the TFIIE beta subunit family.
What are the subcellular locations of this protein?
Nucleus.