PharMolix/UniProtQA huggingface dataset:
Protein: LUXS_STRZT
Sequence: MSKEVIVESFELDHTIVKAPYVRLIGEETGPKGDIISNYDIRLVQPNEDSIPTAGLHTIEHLLAKLIRTRIDGMIDCSPFGCRTGFHMIMWGRHTSAKIAAVIKDSLKEIAETTTWEDVPGTTIESCGNYKDHSLFSAKEWAKLILEQGISDDAFERHVI
What is the function of this protein?
Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment.  The regulation of gene expression in response to changes in cell density is called quorum sensing.  Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).
What are the official names of this protein?
S-ribosylhomocysteine lyase, AI-2 synthesis protein, Autoinducer-2 production protein LuxS.
What is the protein family that this protein belongs to?
Belongs to the LuxS family.
Protein: TERS_BPT4
Sequence: MEGLDINKLLDISDLPGIDGEEIKVYEPLQLVEVKSNPQNRTPDLEDDYGVVRRNMHFQQQMLMDAAKIFLETAKNADSPRHMEVFATLMGQMTTTNREILKLHKDMKDITSEQVGTKGAVPTGQMNIQNATVFMGSPTELMDEIGDAYEAQEAREKVINGTTD
What is the function of this protein?
The terminase small subunit binds to the packaging initiation site and regulates the ATPase activity of the terminase large subunit.  The terminase lies at a unique vertex of the procapsid and is composed of two subunits, a small terminase subunit involved in viral DNA recognition (packaging sequence), and a large terminase subunit possessing endonucleolytic and ATPase activities.  Both terminase subunits heterooligomerize and are docked on the portal protein to form the packaging machine.  The terminase large subunit exhibits endonuclease activity and cleaves the viral genome concatemer once the capsid is full (headful packaging).  Once the capsid is packaged with the DNA, the terminase complex is substituted by neck proteins.
What are the official names of this protein?
Terminase, small subunit, Gene product 16, gp16, Packaging protein Gp16.
Protein: SNPC3_MACFA
Sequence: MAEGSRGVPTCSGVAGRQDPVSGSGGCNFPEYELPELNTRAFHVGAFGELWRGRLRGAGDLSLREPPASALPGSRGIADSDREDAAVARDLDCSLEAAAELRAVCGLDKLKCLEDGEDPEVIPENTDLVTLGVRKRFLEHREETITIDRACRQETFVYEMESHAIGKKPENSADMIEEGELILSVNILYPVIFHKHKEHKPYQTMLVLGSQKLTELRDSIRCVSDLQIGGEFSNTPDQAPEHISKDLYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKLGFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYVDPGTFN
What is the function of this protein?
Part of the SNAPc complex required for the transcription of both RNA polymerase II and III small-nuclear RNA genes.  Binds to the proximal sequence element (PSE), a non-TATA-box basal promoter element common to these 2 types of genes.  Recruits TBP and BRF2 to the U6 snRNA TATA box (By similarity).
What are the official names of this protein?
snRNA-activating protein complex subunit 3, SNAPc subunit 3, Small nuclear RNA-activating complex polypeptide 3.
What is the protein family that this protein belongs to?
Belongs to the SNAPC3/SRD2 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: MURB_MYCTO
Sequence: MKRSGVGSLFAGAHIAEAVPLAPLTTLRVGPIARRVITCTSAEQVVAALRHLDSAAKTGADRPLVFAGGSNLVIAENLTDLTVVRLANSGITIDGNLVRAEAGAVFDDVVVRAIEQGLGGLECLSGIPGSAGATPVQNVGAYGAEVSDTITRVRLLDRCTGEVRWVSARDLRFGYRTSVLKHADGLAVPTVVLEVEFALDPSGRSAPLRYGELIAALNATSGERADPQAVREAVLALRARKGMVLDPTDHDTWSVGSFFTNPVVTQDVYERLAGDAATRKDGPVPHYPAPDGVKLAAGWLVERAGFGKGYPDAGAAPCRLSTKHALALTNRGGATAEDVVTLARAVRDGVHDVFGITLKPEPVLIGCML
What is the function of this protein?
Cell wall formation.
What are the official names of this protein?
UDP-N-acetylenolpyruvoylglucosamine reductase, UDP-N-acetylmuramate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the MurB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CHED_CLOBH
Sequence: MDIKEIKVGIADLNVGKNPDKIITVGLGSCIGIALYDGIKCIGGLSHIMLPDSTQFSKVTNPMKFADLAIPILVEKMEKLGARKNGLKAKICGGASMFNFSDKSMVMDIGNRNGKAVKEKLKELSIPLLAEDIGGNKGRTMIFDTSTGKVYIKTVGLGTKEI
What is the function of this protein?
Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.
What are the official names of this protein?
Probable chemoreceptor glutamine deamidase CheD.
What is the protein family that this protein belongs to?
Belongs to the CheD family.
Protein: ACCA_ECO8A
Sequence: MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA
What is the function of this protein?
Component of the acetyl coenzyme A carboxylase (ACC) complex.  First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
What are the official names of this protein?
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, ACCase subunit alpha, Acetyl-CoA carboxylase carboxyltransferase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the AccA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: G3P_METST
Sequence: MKSIGINGYGTIGKRVADAVSAQDDMKIVGVTKRTPDYEAKAAVEKGYDLYISVPERESQFEEAGIEVAGTADELFEKLDLVVDCTPGGIGAQNKTDIYEKIGLKAIFEGGEDHDAIGSSFNAEANYADNIGEDYVRVVSCNTTGLCRTLKPIYDISGIKKVRAVMVRRGADPSDVKKGPINSIVPTTEVPSHHGPDVQTIIDDINVMTMALLVPTTLMHTHNIMVELEDKITTDDVLDAFENAHRVLPVQKSLKLGSTAEIMEYAKDLGRSRGDMYEIPVWKESVNIENGELFYMQAVHQESDVVPENVDAIRAMLELEEDGEKSILKTNKAMGIL
What are the official names of this protein?
Glyceraldehyde-3-phosphate dehydrogenase, GAPDH, NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TSAD_HALHL
Sequence: MRVLGIESSCDETAAAVYCGRDGLLAHAVHSQVADHAAYGGVVPELASRDHVRKLPGLVGGVLRDAGLTPADLDGVAWTRGPGLPGALMVGAGFARTFAWARGLPAVGVHHMEGHLLAPLLEPDPPAMPLVALLVSGGHTMLVQVADFGRYRVLGESVDDAAGEAFDKTARLLGLPYPGGPAIARLAVEGTPGAVRLPRPMTDRPGLDFSFSGLKTAVLHAVEAAGNDQQARADIAHGFQEAVVDTLVIKCRRAIEQTGAGRLVVSGGVGANARLRERLDEVGRASGFTAHYPRLELCTDNAAMIAYAGLRRLEAGYRDDLDFSVRPRWPLAELS
What is the function of this protein?
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.  Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB.  TsaD likely plays a direct catalytic role in this reaction.
What are the official names of this protein?
tRNA N6-adenosine threonylcarbamoyltransferase, N6-L-threonylcarbamoyladenine synthase, t(6)A synthase, t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD, tRNA threonylcarbamoyladenosine biosynthesis protein TsaD.
What is the protein family that this protein belongs to?
Belongs to the KAE1 / TsaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS20_YERPB
Sequence: MANIKSAKKRAVQSEKRRKHNASRRSMVRTFIKKVYAAIAAGDKDAAQKAFNEMQPIVDRQSCKGLIHKNKAARHKSNLVAQINAMQ
What is the function of this protein?
Binds directly to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS20 family.
Protein: SF3A2_RAT
Sequence: MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPDALPPPPPGGLPLPPMPPTGPAPSGPPGPPQMPPPAPGVHPPAPVVHPPTSGVHPPAPGVHPPAPVVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPPAPAVHPQAPGVHPPAPGIHPQAPGVHPQPPPGVHPAAPGVHPQPPGVHPTPMPPMLRPPLPSDGPGNMPPPPPGN
What is the function of this protein?
Involved in pre-mRNA splicing as a component of the splicing factor SF3A complex that contributes to the assembly of the 17S U2 snRNP, and the subsequent assembly of the pre-spliceosome 'E' complex and the pre-catalytic spliceosome 'A' complex.  Involved in pre-mRNA splicing as a component of pre-catalytic spliceosome 'B' complexes, including the Bact complex.  Interacts directly with the duplex formed by U2 snRNA and the intron.
What are the official names of this protein?
Splicing factor 3A subunit 2.
What is the protein family that this protein belongs to?
Belongs to the SF3A2 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: TRPD_ALKEH
Sequence: MDMQGAIRLVTEGTDLTEAEMTEVMRQIMTGEATPAQIGGFLIGLRMKGETVAEITAAARVMRELATRVTVDEPHLLDTCGTGGDASHTLNVSTACAFVAAAGGARVAKHGNRSVSSSCGSADVLEAAGARLDLNADQVAECIRRVGVGFLFAPQHHSAMKHAIGPRREMGVRTLFNILGPLTNPAGAPHQLLGVYNKHWVVPVAETLRALGSRRVLVVHADDGLDEISIGSDTLVAELNEGEIHEYRITPEQFGLPRAELSDLQVGTAEESLALIREAFAGWEGPAFNIIAINAGAALYAAEKAPTLDAGVAGAAELLRNGSALRKLEAFVRCTREV
What is the function of this protein?
Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).
What are the official names of this protein?
Anthranilate phosphoribosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the anthranilate phosphoribosyltransferase family.
Protein: IPI3_CANGA
Sequence: MDESVIFTTEQNALSTSLYSAEQAVLRQCSTNSRNSAVRVGDKYLFVAQSNKALINVYNISGAHKRETVEQRLPTPEVITCLEVIQNRYEEKSAISDFELPHLLLGSTDGGKIYCWELNSGALLSVKQMAHYQGITKIKSFMDGKYFITSGKDSRVIVWQTIDFVSNNASEPKPICILHDHNLTVNDIAVSMTHGANMSTSGAKLFTASEDSTVRCYDFSFLRGDFRKNRKSQEQDQKMYQPRLLATFTFPAAIEAMSLDPADRALYVGTSEGLFSLPLYYTVKGTSTVANLAQASGSNRNKLYSVVISGHDDDYKKLFSMGQLVCDKLISTPVTKLELTFDATTILVGNKFGRISVVEIASKQILKTLQPLTTADTEEDAITNIIVTTVNNSRQDSILEQHQSNKNVQKLPVLQRVVHDKDHAEHEVWYRAPETPEFSHELESLPPIADFEKYMDSIRSEETVFLTTETTSQVKNVKQELAPASHSNSQEQQELQQELQQVKSAYKELRELHESLFKEHEQLLSSMK
What is the function of this protein?
Component of the RIX1 complex required for processing of ITS2 sequences from 35S pre-rRNA.
What are the official names of this protein?
Pre-rRNA-processing protein IPI3.
What is the protein family that this protein belongs to?
Belongs to the WD repeat IPI3/WDR18 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL4_RALPJ
Sequence: MELKLLQDNGQLGAGVAASPEVFGRDYNEALVHQVVVAYQANARSGNRKQKDREEVKHTTKKPWRQKGTGRARAGMSSSPLWRGGGRIFPNSPEENFSQKVNKKMYRAGMRSIYSQLAREGRINVVDSLSVDAPKTKLLADKFRAMGLDSVLVITDNLDENLFLASRNLAHVLVVEPRHADPLSLVHYKKVLVTKAAVAQIEELLK
What is the function of this protein?
Forms part of the polypeptide exit tunnel.
What are the official names of this protein?
50S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
Protein: MODA_PSEAE
Sequence: MTTRLPQLLLALLASAVSLAASADEVQVAVAANFTAPIQAIAKEFEKDTGHRLVAAYGATGQFYTQIKNGAPFQVFLSADDSTPAKLEQEGEVVPGSRFTYAIGTLALWSPKAGYVDAEGEVLKSGSFRHLSIANPKTAPYGLAATQAMDKLGLAATLGPKLVEGQNISQAYQFVSSGNAELGFVALSQIYKDGKVATGSAWIVPTELHDPIRQDAVILNKGKDNAAAKALVDYLKGAKAAALIKSYGYEL
What is the function of this protein?
Part of the ABC transporter complex ModABC involved in the transport of molybdenum into the cell (Probable).  Binds tungstate and molybdate (PubMed:31627455, PubMed:25172858).  Can also bind chromate, with lower affinity (PubMed:31627455).  Plays an essential role in recruitment of molybdate for nitrate reduction (PubMed:25172858).
What are the official names of this protein?
Tungstate/molybdate/chromate-binding protein ModA.
What is the protein family that this protein belongs to?
Belongs to the bacterial solute-binding protein ModA family.
What are the subcellular locations of this protein?
Periplasm.
Protein: ISPG_ECOHS
Sequence: MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK
What is the function of this protein?
Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.
What are the official names of this protein?
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin), 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase.
What is the protein family that this protein belongs to?
Belongs to the IspG family.
Protein: RS8_GEOSM
Sequence: MCMTDPVADMLTRIRNAGMAKHQKVDIPSSNLKVSLATVLRAEGFIKNFKVIADNKQGILRVYLKFIDEKEPVINEIKRISKPGGRVYVNSDKIKQVKNGLGVAILSTSKGLVTDKTAREMGIGGEVLCTVW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.
Protein: BORE1_DANRE
Sequence: MAPRKRTQNAKSKKNPKAPKLEAFLLDFDDEVHTIVERLKEKTNNLLKDADNLYKTALIKLPMAVRKMNWIEYCNLEKPKSPVDDSKVREEAAQVELAIAGNHTIPKVAAKEAKSSANSEDENMAPLKSTMKKKKASKKAPSTSKKPRTLSISKQGGTIQRTTRKPLITPARSFLDSSIIGATPLITPRFDPRLPKTPALRSALHREKVYSMSVNGSPLSAGGEDIVISVPIGNGECIQLLASEMDSVDLSQLDEKALRSIRNLQNRLTTLCGSSK
What is the function of this protein?
Component of the chromosomal passenger complex (CPC), a complex that acts as a key regulator of mitosis.  The CPC complex has essential functions at the centromere in ensuring correct chromosome alignment and segregation and is required for chromatin-induced microtubule stabilization and spindle assembly (By similarity).
What are the official names of this protein?
Borealin, Cell division cycle-associated protein 8, Dasra-B, DasraB, DrDasraB.
What is the protein family that this protein belongs to?
Belongs to the borealin family.
What are the subcellular locations of this protein?
Nucleus. Chromosome, centromere. Cytoplasm, cytoskeleton, spindle. Note=Localizes on chromosome arms and inner centromeres from prophase through metaphase and then transferring to the spindle midzone and midbody from anaphase through cytokinesis.
Protein: SDCS_STAA3
Sequence: MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFLLTLLFFHPQDLPWKGVYVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFILAIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVMIMIPIGLAIIKEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGYEISFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVVQTIFVLASLLWITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQMASVGFWVNLISAIIIILVVYYVMPIVLGIDINQPLPLK
What is the function of this protein?
Mediates the transport of the dicarboxylates fumarate, malate, and succinate across the cytoplasmic membrane via a Na(+)-electrochemical gradient.
What are the official names of this protein?
Sodium-dependent dicarboxylate transporter SdcS, Na(+)/dicarboxylate symporter.
What is the protein family that this protein belongs to?
Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. NADC subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: UPPP1_STRAW
Sequence: MSVINVGQAVVLGAVEGVTEFLPVSSTGHLKITEGLMGIPVDDNAVVGFSAVIQVGAIAAVLVYFFKDIVRIVSAWGRGLRNRDERHHHDYKFAWWVIYATIPIVIVGLAAKSLIEGPLASLWVVAASLIVGSGVMWAADQMGRHKRGEDDTSFKDAMLVGSSQILALLFPGFSRSGATMSTALILDLDRVAATRLSFFLGIPALTGAGLYELKDALGTGVGVAPLAVGTIVSFVVAYGSISWLLKFVAKHSFNAFVIYRIVIGVLLLGLLGTGVLS
What is the function of this protein?
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP).  Confers resistance to bacitracin.
What are the official names of this protein?
Undecaprenyl-diphosphatase 1, Bacitracin resistance protein 1, Undecaprenyl pyrophosphate phosphatase 1.
What is the protein family that this protein belongs to?
Belongs to the UppP family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: NAGB_LACLM
Sequence: MKVIVVKNQLEGGKIGLDLLKESINNGAKTLGLATGSTPVEFYNQIVNSDLDFTNMVSVNLDEYVGLDGSNEQSYRYFMTKHLFGEKPFKENFLPNGKATDLEAEAKHYDQIIEENPIDWQILGIGQNGHIGFNEPGTPAEITTHVVDLQESTIKANARFFESEADVPRKAISMGLASIMKSKNIVLMAYGKEKAEAIKGMVEGEVTTELPASILQNHANVTVIADEAAVSLLSK
What is the function of this protein?
Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
What are the official names of this protein?
Glucosamine-6-phosphate deaminase, GlcN6P deaminase, GNPDA, Glucosamine-6-phosphate isomerase.
What is the protein family that this protein belongs to?
Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
Protein: AATR3_SCHPO
Sequence: MDNLKKKYQHHLSLESASREYGPFQMLGRIQSDSDIKMLSFAGGEPNPSKFPIHKLSVSFPEVNSWEKDTNKDATVSYELSNNANEGSLDLLGALQYGQCQGIPELVKFIKDHVGQIHMPQYKDWDIKITNGNTIGLEYCLRLLVNRGDCILIEKYTYPAAITAMRPLGVKFIPIDMDENGMLPESFEKVMETWDSSLGARPHVLYTIPTGQNPTGSTLTLERRKKFLTLAKKYDIIIVEDEPYYFLQMEKYDANWKPDKQAFNISSFKKKLIPSLLHLDTDGRVLRVDSFSKLIVPGLRLGWITGNSLFIDRITRYAEVCTESPSGVSQVVLYAILNRWGQNGFLEWLQDLQNSYTMRRNALLLAADKHLPKSVCKYHSPKAGLFLWVELDKNRLICSNMDKSISEIEMEIFVELVNNGVKPVCGQLFMGEPNSADKIFFRFAYSLADLSTFEAGLERFTSTIQKYFQL
What is the function of this protein?
Has aromatic amino acid transaminase activity.
What are the official names of this protein?
Aromatic amino acid aminotransferase C569.07.
What is the protein family that this protein belongs to?
Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUTA_CAUST
Sequence: MQVGVFIPIGNNGWLISETSPQYMPSFELNKEITQKAETYGFDFALSMIKLRGFGGKTQFWEHNLESFTLMAGLAAVTSKIKIFATVATLTIPPAIVARMASTIDSIAPGRFGVNLVTGWQKAEYSQMGLWPGEAHYTDRYNYLAEYTTVLKDLLETGVSDFKGKYFTMDDCRVSPHPKETKLICAGSSDEGLAFTAQYADYSFALGKGTNTPTAFASVNKRLEAAAEKTGRDVQSFILFMIIADETDEKAMAKWQSYRDGADQEALAWLTQQAAPNAKAGATTNTQQLAAPESAVNLNMGTLVGSYESIAKMLDEIAAVPGTAGVLLVFDDFLRGVEDFGTRIQPLMKSRT
What is the function of this protein?
Catalyzes the pyrimidine ring opening between N-3 and C-4 by an unusual flavin hydroperoxide-catalyzed mechanism, adding oxygen atoms in the process to yield ureidoacrylate peracid, that immediately reacts with FMN forming ureidoacrylate and FMN-N(5)-oxide.  The FMN-N(5)-oxide reacts spontaneously with NADH to produce FMN.  Requires the flavin reductase RutF to regenerate FMN in vivo.
What are the official names of this protein?
Pyrimidine monooxygenase RutA.
What is the protein family that this protein belongs to?
Belongs to the NtaA/SnaA/DszA monooxygenase family. RutA subfamily.
Protein: Y1966_KLEP3
Sequence: MFAGLPSLSHEQQQKAVERIHELMAQGMSSGQAIALVAEELRATHTGEQIVARFEDEDEDQDEDEDD
What are the official names of this protein?
UPF0181 protein KPK_1966.
What is the protein family that this protein belongs to?
Belongs to the UPF0181 family.
Protein: IF1_SOLUE
Sequence: MSKEDSIEVTGTVLEKFPSGLFSVQLEHERVVLAHLAGRLRRNRIRVLAGDKVTLELSPYDLTKGRITFRHR
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds.  Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).  Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
What are the official names of this protein?
Translation initiation factor IF-1.
What is the protein family that this protein belongs to?
Belongs to the IF-1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SPDS1_HYONI
Sequence: MEVTNQSNGCSNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKEFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIGPAQELFEKPFFESIARALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPIDDESGPKTIAPLKFYNSEIHQASFCLPSFAKRVIESKGK
What are the official names of this protein?
Spermidine synthase 1, SPDSY 1, Putrescine aminopropyltransferase 1.
What is the protein family that this protein belongs to?
Belongs to the spermidine/spermine synthase family.
Protein: PCNA1_PBCV1
Sequence: MDDDNVLFHIRTLQGNVIKSLFDCLKEILHDVMLSFGPTGIRISALDGAKVSLVHLKLDSESFEEYKCEHTYELGVNVLNMFKLLRSAGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMKLIEIDSVEIEVGDIEFDTIIVMPANYFQRICRDMSDITDHLVIVKKGDEVSFNSDYTCVTDFASQKTIIGDSDNGQITCNNDTDYESKFSLKYLTSFCKASGMSSAVEIYLKESYPLILKYTVGSMGALKFVIAPILS
What is the function of this protein?
Sliding clamp subunit.  Responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication (By similarity).
What are the official names of this protein?
Probable DNA polymerase sliding clamp 1, Proliferating cell nuclear antigen homolog 1, PCNA 1.
What is the protein family that this protein belongs to?
Belongs to the PCNA family.
Protein: RL20_LACLS
Sequence: MARVKGSVATRKRRKRILKLAKGYYGAKHRLFKTAKEQVMNSYYYAFRDRRQKKRDFRKLWIARINAAARMNGLSYSKLMHGLKLADIEVNRKMLADIAIADAAAFTALAEEAKKALAK
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
Protein: VL1_HPV64
Sequence: AQGHNNGICWHNQLFLTVVYTTRSTNFSVCVGTQSTSTNPPYANTNFKEYLRHAEEYDLEFVFQLCKITLTTDVMTYIHSMSSSILEQWNFGLTPPPSGTLEETYRYVTSQAITCQRPQPPKESEDPYAKMTFWEVDLKEKFSAELDQFPFGR
What is the function of this protein?
Forms an icosahedral capsid with a T=7 symmetry and about 55 nm diameter.  The capsid is composed of 72 pentamers linked to each other by disulfide bonds and associated with L2 proteins.  The capsid encapsulates the genomic DNA, but does not bind DNA.  Essential for the initial attachment to the host cell (By similarity).
What are the official names of this protein?
Major capsid protein L1.
What is the protein family that this protein belongs to?
Belongs to the papillomaviridae L1 protein family.
What are the subcellular locations of this protein?
Virion.
Protein: RL35_PSEPK
Sequence: MPKMKTKSGAAKRFLKTASGFKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVERMLRVR
What are the official names of this protein?
50S ribosomal protein L35.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL35 family.
Protein: Y1831_STAA1
Sequence: MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVPFTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLKSEQSQQAIESMIQQQLQKLTKDQLSIKQITSQIDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLDQHVDNATDLLCDRARNYLSSAKGTQDINDMLDTFFHEKGKLIGMLQMFMTKESIADRIQQELIRLTSHPKARTIVTSLITNEYQTFKDKPLNELLDASQFNEIAENLSVYVTTYASNQANKPVVTLMPQFVDYLEGQLSSKLANLIIEKLSIHLSTIMKKVDLRGLIEEQINTFDLDYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV
What are the official names of this protein?
UPF0754 membrane protein SAHV_1831.
What is the protein family that this protein belongs to?
Belongs to the UPF0754 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.