PharMolix/UniProtQA huggingface dataset:
Protein: IF2_MYCA9
Sequence: MAGKARVHELAKELGVTSKEVLARLSDQGEFVKSASSTVEAPVARRLRESFGGGDKPAPAASNGAAAEAAAPPKKAGPKPGAPKPAPKKVAEPVVEAPVAPEPPAAPAAPAAPAPKPSPAARPAAAEAAAPAPAPAPAPRPGATPGPKPGAPRVPRVGNNPFSSAQPAERPAPRPQAPRPGAPRPGGASPSNMPPRPSPGSMGPRPPRPGGGPRPGGGPRPGGAGRPGGGGGGNYRGGGTGTGAPAGGPPGAGGGFRGRPGGGGGGGRPGQRGGAAGAFGRPGGAPKRGRKSKRAKRAEYENMQAPVVGGVRLPHGNGEVIRLARGASLSDFAEKIDANPASLVQALFNLGEMVTATQSVGDETLELLGGEMNYVVQVVSPEDEDRELLESFDLTYGEDEGGEEDLRTRPPVVTVMGHVDHGKTRLLDTIRKANVREGEAGGITQHIGAYQVAVEHDGTERPITFIDTPGHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVAVNKIDKEGADPAKIRAQLTEYNLVAEDFGGDTMFVDISARQGTNIEQLLEAVLLTADAALDLRANPDMEAQGVAIEAHLDRGRGPVATVLIQRGTLRVGDSIVAGDAYGRVRRMVDEHGEDVEEALPSRPVQVIGFTSVPGAGDNLLVVDEDRIARQIADRRSARKRNALAARSRKRISLDDLDAALKETSQLNLILKGDNAGTVEALEEALLGIAIDDEVQLRVIDRGVGGVTETNVNLASASDAIIIGFNVRAEGKATELANREGVDIRYYSVIYQAIDEIESALKGMLKPVYEEVELGRAEIRAMFRSSKVGNIAGCLVTSGIIRRNAKARLLRDNIVVAETVTISSLRREKDDVVEVRDGYECGLTLTYNDIKEGDVIEAYELREKERV
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
What are the official names of this protein?
Translation initiation factor IF-2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LGK_LIPST
Sequence: MPIATSTGDNVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQPIKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDAIASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAAGRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYYDFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVDQELVDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVDHYRRYAPSQEIDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVPAGAKEAITFAWQGMEALVGRSIPVPTRVETRQHYVLGKVSPGLNYRSVMKKGMAFGGDAQQLPWVSEMIVKKKGKVITNNWA
What is the function of this protein?
Levoglucosan kinase that catalyzes the transfer of a phosphate group from ATP to levoglucosan (1,6-anhydro-beta-D-glucopyranose, LG) to yield glucose 6-phosphate in the presence of magnesium ion and ATP (Ref. 1, PubMed:21719279, PubMed:26354439).  In addition to the canonical kinase phosphotransfer reaction, the conversion requires cleavage of the 1,6-anhydro ring to allow ATP-dependent phosphorylation of the sugar O-6 atom (Ref. 1, PubMed:21719279, PubMed:26354439).
What are the official names of this protein?
Levoglucosan kinase, LGK.
What is the protein family that this protein belongs to?
Belongs to the anhydro-N-acetylmuramic acid kinase family.
Protein: UBP3_YEAST
Sequence: MNMQDANKEESYSMYPKTSSPPPPTPTNMQIPIYQAPLQMYGYTQAPYLYPTQIPAYSFNMVNQNQPIYHQSGSPHHLPPQNNINGGSTTNNNNINKKKWHSNGITNNNGSSGNQGANSSGSGMSYNKSHTYHHNYSNNHIPMMASPNSGSNAGMKKQTNSSNGNGSSATSPSYSSYNSSSQYDLYKFDVTKLKNLKENSSNLIQLPLFINTTEAEFAAASVQRYELNMKALNLNSESLENSSVEKSSAHHHTKSHSIPKHNEEVKTETHGEEEDAHDKKPHASKDAHELKKKTEVKKEDAKQDRNEKVIQEPQATVLPVVDKKEPEESVEENTSKTSSPSPSPPAAKSWSAIASDAIKSRQASNKTVSGSMVTKTPISGTTAGVSSTNMAAATIGKSSSPLLSKQPQKKDKKYVPPSTKGIEPLGSIALRMCFDPDFISYVLRNKDVENKIPVHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLTMYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELLPFKSSSGNDVEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQKRN
What is the function of this protein?
Has an ATP-independent isopeptidase activity, cleaving at the C-terminus of the ubiquitin moiety in natural or engineered linear fusion proteins, irrespective of their size or the presence of an N-terminal extension to ubiquitin (PubMed:12778054, PubMed:17632125).  Plays a role in regulation of silencing by interacting with SIR4 (PubMed:8752220).  Also, in conjunction with BRE5, cleaves ubiquitin, leading to the subsequent mono-ubiquitination of SEC23 (PubMed:12778054).  Required for ribophagy, a process which relocalizes ribosomal particles into the vacuole for degradation in response to starvation (PubMed:20508643).
What are the official names of this protein?
Ubiquitin carboxyl-terminal hydrolase 3, Deubiquitinating enzyme 3, Ubiquitin thioesterase 3, Ubiquitin-specific-processing protease 3.
What is the protein family that this protein belongs to?
Belongs to the peptidase C19 family.
Protein: LIMK1_MOUSE
Sequence: MRLTLLCCTWREERMGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYWARYGESCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGDGDTYTLVEHSKLYCGQCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASAHGKRGLSVSIDPPHGPPGCGTEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLIQETSRLLQLTLEHDPHDSLGHGPVSDPSPLSSPVHTPSGQAASSARQKPVLRSCSIDTSPGTSSLASPASQRKDLGRSESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKNMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENRNVVVADFGLARLMIDEKNQSEDLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEQWLETLRMHLSGHLPLGPQLEQLERGFWETYRRGESSLPAHPEVPD
What is the function of this protein?
Serine/threonine-protein kinase that plays an essential role in the regulation of actin filament dynamics (PubMed:15056216, PubMed:16204183).  Acts downstream of several Rho family GTPase signal transduction pathways (PubMed:15056216).  Activated by upstream kinases including ROCK1, PAK1 and PAK4, which phosphorylate LIMK1 on a threonine residue located in its activation loop.  LIMK1 subsequently phosphorylates and inactivates the actin binding/depolymerizing factors cofilin-1/CFL1, cofilin-2/CFL2 and destrin/DSTN, thereby preventing the cleavage of filamentous actin (F-actin), and stabilizing the actin cytoskeleton.  In this way LIMK1 regulates several actin-dependent biological processes including cell motility, cell cycle progression, and differentiation.  Phosphorylates TPPP on serine residues, thereby promoting microtubule disassembly.  Stimulates axonal outgrowth and may be involved in brain development (By similarity).
What are the official names of this protein?
LIM domain kinase 1, LIMK-1, KIZ-1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Cytoplasm, cytoskeleton. Cell projection, lamellipodium. Note=Predominantly found in the cytoplasm (By similarity). Localizes in the lamellipodium in a CDC42BPA, CDC42BPB and FAM89B/LRAP25-dependent manner.
Protein: TIG_RICTY
Sequence: MGIIVLKNEGLNFHARISTPLSEIDYDIQKELLDLTKKVKVAGFRVGKVPISIVKKKYGISIRNDIIEKRINNLVNHVIKEYNLNIIGRPKIEELQNEPDKALEFTVKIELLPKITIPDLKKISLDRPKLAVNSKDVEAQLEKLAALTKCYTKESKTKIKDGDQVTIDAIGYIKDRAFDEGKLNDFKVIIGSNTLIPGFEQQLIGSKTGSKVDVNVTFPENYHARNLSGKDAHFVVQIKAVHTAEPTVIDEEFAKKFQSNSLEELRTHFAKQIENESEEAINTIMKMNLFDKLEKLLDFDVPESLLEQEKNILKSETDKNKHDGSLLNGKSSKEIIEYYNKLALRRVRIGLLLAEYAKFKNLQLEPDDLKKVIMQQARNFPGQENMIFDFYKNNPRAIEGLRGPALEDKTVQYIFNNEIQLKEKRYSKEELEKYLETEEQQRISLI
What is the function of this protein?
Involved in protein export.  Acts as a chaperone by maintaining the newly synthesized protein in an open conformation.  Functions as a peptidyl-prolyl cis-trans isomerase.
What are the official names of this protein?
Trigger factor, TF, PPIase.
What is the protein family that this protein belongs to?
Belongs to the FKBP-type PPIase family. Tig subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm.
Protein: 3SIM2_DENAN
Sequence: MKTLLLTLVVVTIVCLDLGYTLTCVTTKSIGGVTTEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATCPKVDNNDPIRCCGTDKCND
What is the function of this protein?
Binds irreversibly to M1 (CHRM1) muscarinic acetylcholine receptors, and reveals a slightly weaker effect on M3 (CHRM3) receptors.  The mechanism of toxin-receptor interaction comprises at least two steps.  The first step is fast with no competition between the toxin and the antagonist.  The second step is slow with formation of a more stable toxin-receptor complex and inhibition of the antagonist binding.
What are the official names of this protein?
Muscarinic toxin 2, MT2, MTx2.
What is the protein family that this protein belongs to?
Belongs to the snake three-finger toxin family. Short-chain subfamily. Aminergic toxin sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: GCH1_ECOK1
Sequence: MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN
What are the official names of this protein?
GTP cyclohydrolase 1, GTP cyclohydrolase I, GTP-CH-I.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase I family.
Protein: K1C3_XENLA
Sequence: MSFRSSSSYSVQSKNVSGGGGFGSSYGGGSSSSFGGGYGAGFGGGYGAGFGGGASSGFSSSSSGGFGAAAASSSFSSFGGNDKQTMQNLNDRLASYLEKVRALEAANADLELKIREWYEKQKGSGIGAASKDFSKYFEIISDLRNKILFATIDNPRVVLQIDDAKLAADDFRLKFENELALRQSVEADINGLRRVLDELTLARGDLEMQIESLTEELAYLKKNHEEEMSIAKGSAAGQVTVEMDAAPGVDLNKILSDMRADYETLAEKNRRDAELWFNQK
What are the official names of this protein?
Keratin, type I cytoskeletal 47 kDa.
What is the protein family that this protein belongs to?
Belongs to the intermediate filament family.
Protein: ILVD_ALIB4
Sequence: MRSDEVKKGFDRTPHRSLLRATGLKDEDFDKPFIGVANSFIELIPGHFFLDKVSAIIKEEIRANGCVPFEFNTIGVDDGIAMGHDGMLFSLPSRELIANSIETVMNAHKLDAMIAIPNCDKIVPGMIMGALRVNVPTIFVSGGPMQKGYTKDGTPIDLATAFEAVGKFEAGDISEEQLKDIECNACPSGGSCSGMFTANSMNTLMEAMGIALPGNGTILALTPQREVLYRQAARRICEIAKDKASREKYKLKNILNENAVKNAFAVDMAMGGSSNTVLHMLAISKEAGVNFELKDINAISKRVSHIAKISPSLSTVHMEDINKAGGVNAVMKEMTKRGNDILADNLTISGETVLEKIKDAYIKDTNIIHTIDNPYSQVGGLAILYGNLAEQGAVIKTAGITGSRVFTGTAVCFDGQPEAIKGIVSGKVKAGNVVVIRYEGPKGGPGMQEMLAPTSLIMGMGLGSSVALITDGRFSGATRGASIGHVSPEAAEGGMIGLLKDGDEIHIDVDQYILSVNLSDEEIAKRKADFKPLKKPLNSSWLGQYRALVTNASSGAVLKTDL
What is the function of this protein?
Functions in the biosynthesis of branched-chain amino acids.  Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
What are the official names of this protein?
Dihydroxy-acid dehydratase, DAD.
What is the protein family that this protein belongs to?
Belongs to the IlvD/Edd family.
Protein: SCO2_DANRE
Sequence: MLRLRVFDRHKRLWSVLQSTIRGNNISNHIPNTTCRSSAPPHLCARQRAFYSQNSPKTPNPGSSAGIKLRTRLVVTLLFGGGIIGTWWYVHQEKEKRIQMQRLEQLRKVALGQGDFHLLDHTGQRRTKRDFLGHWVLLYFGFTHCPDICPDELEKLTSVVHILDKDPSLPSVQPLFITVDPERDDVSAMARYVKDFHPRLVGLTGSAEEVKQAGRDFRVYASNGPKDEDGDYIVDHSIVIYLVNPDGLFIDYYNRMKNDTQIAESIRNHMKTFVRLFPD
What is the function of this protein?
Copper metallochaperone essential for the synthesis and maturation of cytochrome c oxidase subunit II (MT-CO2/COX2).  Involved in transporting copper to the Cu(A) site on MT-CO2/COX2.  Also acts as a thiol-disulfide oxidoreductase to regulate the redox state of the cysteines in SCO1 during maturation of MT-CO2/COX2.
What are the official names of this protein?
Protein SCO2 homolog, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the SCO1/2 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Single-pass membrane protein.
Protein: TILS_BACSU
Sequence: MKSVKDFLNKHNLTLKGATIIVGVSGGPDSMALLHALHTLCGRSANVIAAHVDHRFRGAESEEDMRFVQAYCKAEQLVCETAQINVTAYAQEKGLNKQAAARDCRYQFFEEIMSKHQADYLALAHHGDDQVETMLMKLAKGTLGTGLAGMQPVRRFGTGRIIRPFLTITKEEILHYCHENGLSYRTDESNAKDDYTRNRFRKTVLPFLKQESPDVHKRFQKVSEALTEDEQFLQSLTKDEMNKVITSQSNTSVEINSSQLLALPMPLQRRGVQLILNYLYENVPSSFSAHHIQQFLDWAENGGPSGVLDFPKGLKVVKSYQTCLFTFEQWQCKNVPFEYQISGAADETAVLPNGYLIEARHYADSPEEHGNAVFITSEKKVRFPLTIRTRKAGDRIKLKGMNGSKKVKDIFIDKKLPLQERDNWPIVTDASGEIIWIPGLKKSIFEDLVIPNSDRIVLQYRQHEKCRGQAKS
What is the function of this protein?
Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner.  Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.
What are the official names of this protein?
tRNA(Ile)-lysidine synthase, tRNA(Ile)-2-lysyl-cytidine synthase, tRNA(Ile)-lysidine synthetase.
What is the protein family that this protein belongs to?
Belongs to the tRNA(Ile)-lysidine synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS8_PAEAT
Sequence: MTMTDPVADMLTRLRNANSAYHDTVSMPYSKLKARVADILKAEGYIAGWKEEDAEVGKKLTIDLKFGPNRERSIAGVRRISKPGLRVYAKSTNLPHVLGGLGIAILSTSSGLLTDKQAGKKGVGGEVLAYVW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.
Protein: TRMD_BURMS
Sequence: MDEATQSAIQFDVVTLFPEMFRALTDWGITSRAVKQGRFGLRTWNPRDFTTDNYRTVDDRPYGGGPGMVMLAKPLEAAIGAAKAAQAAQGVATSRVVMMSPQGAPLTHERVARMAAEPGVVLLCGRYEAIDQRLIDRCVDEELSLGDFVLSGGELPAMALMDAVVRLLPGVLNDAQSAVQDSFADGLLDCPHYTRPEEYEGVRVPDVLLGGHHAEIERWRRQEALRNTIAKRPDLIARARREKLLSRADEAWLASLAKEAKQAS
What is the function of this protein?
Specifically methylates guanosine-37 in various tRNAs.
What are the official names of this protein?
tRNA (guanine-N(1)-)-methyltransferase, M1G-methyltransferase, tRNA [GM37] methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase TrmD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLGA_YERP3
Sequence: MRVLHVCSELFPLLKTGGLADVIGALPAAQLAEGADVRIILPAFPDLRRGIPETVLVREIDTFAGRVALRYGHYRGIGIYLIDAPALYDRAGSPYHDASLYAYSDNYQRFALLGWMACELACGLDGYWRPEVVHAHDWHAGLTCAYLAARGRPARSVFTVHNLAYQGLFSAHHLSELQLPAEFFQIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALAHQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLTESKPIFAVVSRLTAQKGLDLVLEALPELLALGGQLVVLGSGDTTLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVDCALENLADGSASGFVFNECEAQALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQLAAVDYLSLYRRL
What is the function of this protein?
Synthesizes alpha-1,4-glucan chains using ADP-glucose.
What are the official names of this protein?
Glycogen synthase, Starch [bacterial glycogen] synthase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
Protein: MNMA_ACIF2
Sequence: MADKKALIALSGGVDSAVAALLMQGQGYELTGVTMRLWPRSRCCDEKDIEDAAEICARLGIPYTVLDYREAFRRQVVDVFVAEYQAGRTPNPCARCNQFLKFDALLAEGEKLGATMLATGHYARLAETSSGTALLRGRDHAKDQSYFLFAIGAGILSRLRFPVGGMNKDEVRAMARKHGLPVAAKQDSQDICFVPDGDYRRFLEDYAGLDMAQEGEMVDSSGQVLGHHPGTLHFTVGQRKGLGGGSDQPRYVLALDPAQNRVIVGGEDELYRGVVSLAECNWLTDLSPGETHAVTVKLRYRSRAESAMLHLLSDARAELRFREPQRAVTPGQAAVCYQGERLLGGGWIQGTE
What is the function of this protein?
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
What are the official names of this protein?
tRNA-specific 2-thiouridylase MnmA.
What is the protein family that this protein belongs to?
Belongs to the MnmA/TRMU family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CPSF4_MOUSE
Sequence: MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPPLPQQTQPPTKRAPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
What is the function of this protein?
Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition.  CPSF4 binds RNA polymers with a preference for poly(U) (By similarity).
What are the official names of this protein?
Cleavage and polyadenylation specificity factor subunit 4, Cleavage and polyadenylation specificity factor 30 kDa subunit, CPSF 30 kDa subunit, Clipper homolog, Clipper/CPSF 30K.
What is the protein family that this protein belongs to?
Belongs to the CPSF4/YTH1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL392_ARATH
Sequence: MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF
What are the official names of this protein?
60S ribosomal protein L39-2.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL39 family.
Protein: RBL_FLAPR
Sequence: MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEDNQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFEGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMLKRAVFARELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLATEGNEIIREATKWSPELAAACEVWKEIKFEFQAMDTLDTDKDKDKKR
What is the function of this protein?
RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process.  Both reactions occur simultaneously and in competition at the same active site.
What are the official names of this protein?
Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit.
What is the protein family that this protein belongs to?
Belongs to the RuBisCO large chain family. Type I subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: DECR2_RAT
Sequence: MTQQPPDVEEDDCLSEYHHLFCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRCLPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLGTFNVSRVLYEKFFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLAVEWGPQNIRVNSLAPGAISGTEGLRRLGGPKASSKFKYLSSPIPRLGTKTEIAHSVLYLASPLASYVSGIVLVVDGGSWMTLPNDIGRLLEFESSSAKL
What is the function of this protein?
Auxiliary enzyme of beta-oxidation.  Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome.  Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.  Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.
What are the official names of this protein?
Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], 2,4-dienoyl-CoA reductase 2, DCR-AKL, pVI-AKL.
What is the protein family that this protein belongs to?
Belongs to the short-chain dehydrogenases/reductases (SDR) family. 2,4-dienoyl-CoA reductase subfamily.
What are the subcellular locations of this protein?
Peroxisome.
Protein: MED23_XENLA
Sequence: MESQLQSIFEEMVKTEIIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSVLPQESHEQCVQWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRMVCEALINSDSLEWERTQLWILTFKLIRKIIGGVDYKGVRDLLKVILEKIQTVPDTVSSAVVQQLLAAREVVAYILERNACLLPAYLAVTEVLKLYPEGKLPHWLLGDLVSDFVDSFRPTARIGSICGRCSLLPVVNNSGAICNSWKLDPLTLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVLEDQLVDLVVYAMERSETEEKYDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDITKPQSTHSFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLQMTDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGNVNIPLPGSNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKMAQAKSTFALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAGVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTIARATHVTDFFTGSESIQGTWCKDILQTIISFTPHNWALHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSLQGSPPLFLCLLWKMLLETDQINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEMLNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELIPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMQLRDRTNLKRKLVHAIIGSLKDNRPQGWCLSDTYLKFGMNPRDDNPWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVNILNSPSLTSETEWVGYPFQLFDFTACHKAYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLPEVLIPIVKTEYQLLYVYHLIGPFLQRFQQERTRCMIEIGVAFYEMLLNVDQCSTHLSFMDPVCDFLYHMKYMFTGDSIKDQVEKIICNLRPALKLRLRHITHISTESAAPPPPPMNSGSPAPQPNQVPVSVPLTVTQ
What is the function of this protein?
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes.  Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery.  Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
What are the official names of this protein?
Mediator of RNA polymerase II transcription subunit 23, Mediator complex subunit 23.
What is the protein family that this protein belongs to?
Belongs to the Mediator complex subunit 23 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: REM13_ARATH
Sequence: MANSRIYPQFFHTLVPSFHTHLMIPEDFFSEYIEGRSVAELKLDFSDKSWEVKLSDRRITDGWEEFVVANDFRIGDVVAFRYVGNLVFHVSNLGPNYYEIEHNDGESLLRKRLHQVDFSSNNGDVCDSEELPKEKKAKTNSEEADAVSSSSSADKSCFMAIITALDLTTDTLYLPLHFTSANGLTRKNREIILTDGGERSRVLDLRFDESSGTFYISRGWRNFCDENGQKAGGFFLFKLVGKGETLVLSFCPTESINGEENITREDSKDECSSLDSLMNIVEKKKYIPKPRGSPYSSYSPSHKQFVTFTLPPDYARIGKLSLSAPFVRENGINKPGEICLLDKHGRKWLTSLLLDSKGTMSLGKGWKEFVKANSLETGFTLKLIWEETTPVLSLCSPESNSDREQEEISKAIEKHSLFIDPSNRDKISNNDKEENMSWERKKDHLKSRDSTLSSQKQFVTITITPSSDRLVSLSNDSCLVVVSLLYFDMRLPKVFTRENGINKPGRITLLGKDGIKQQTNLLFDKANGAMSLGHGWKDFVKDNGLKTGDSFTLKLIWEDQTPVLSLCPADCSIDREAGGGRSETNQKKSLPIEPSTCKKIRKDVNIKDDNSKEKNDKEESKSVDGERKYLRGTYLTPSSQKHFVTLTITPSSIKKDRLILSPQFARKNNIDKPGMIYLLDTDGTKWLISLQRDKKGTMSLGKGWKEFAEANDFKLGESFTMELVWEDTTPMLSLLRTEFRSSKANEKESISSEHKTRESSPTIKNRIVTPALTPEDVKACKLILPSQFMKKIRTVDKERNHLKGRDLNPSCQKQFVTFTITPTCVGKNRLILSAQFARENNINQPGTIYLLDTDGRKWLTTVKRDKKGTMSLGKGWKEFADTKDLKSGDSFTMELIWEDTNPVLSLLRTKFSSSKSNKEESIFLEPKSRDSSSPTIVNRFVTLALTPEDVTACKLILPSQFMKANGINNKLGKITLLGENGVEWPGYMLSLDGTLALGNGWEGFCEANGVKLGQTFTLEFVNEQDTTTTPVLKFSSVETIYKNVN
What are the official names of this protein?
B3 domain-containing protein REM13, Protein REPRODUCTIVE MERISTEM 13.
What are the subcellular locations of this protein?
Nucleus.