PharMolix/UniProtQA huggingface dataset:
Protein: LYR_PROMI
Sequence: MSLGIRYLALLPLFVITACQQPVNYNPPATQVAQVQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVKCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTVIVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
What is the function of this protein?
Amino-acid racemase that catalyzes the interconversion of L-lysine and D-lysine.  To a lesser extent, is also able to interconvert arginine enantiomers (Ref. 1, PubMed:23118975).  Cannot use methionine, asparagine, alanine, leucine, glutamine, phenylalanine and histidine as substrates (Ref. 1).
What are the official names of this protein?
Lysine racemase.
What is the protein family that this protein belongs to?
Belongs to the alanine racemase family. Bsr subfamily.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor; Periplasmic side. Periplasm.
Protein: CYB_DANRE
Sequence: MTSLRKTHPVLKIANDALVDLPTPLNISAWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVVHICRDVNFGWLIRSIHANGASFFFICLYIHIARGLYYGSYLYNETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFIIIAMVILHLLFLHETGSNNPLGLNPNMDKIPFHPYFSNKDLLGFVIMLFSLSLLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGMAFRPVTQFLFWTLVADMLVLTWIGGMPVEHPYIIIGQMASILYFSLFLVLFPITGILENKALQWS
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: ZIPA_PSE14
Sequence: MEIGLREWLIVIGIIVIAGILFDGWRRMRGSKGKLKFRLDRSFSNLPDEEETTSAEVLGPPRVLDTHKEPQLDEHDLPSMSASPREGKRSNSDKRGNSDKKRKDEPQQGDLNLDLDGPSLFTGRDDDFPDDKPAQRITEDKDLPPVEEVLVISVISRSEGGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMANAVKPGVFDLDDIDHFSTRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELDGELKDDQRSVMTAQTIEHYRQRIVEFERRALTQRRG
What is the function of this protein?
Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring.  Also required for the recruitment to the septal ring of downstream cell division proteins.
What are the official names of this protein?
Cell division protein ZipA.
What is the protein family that this protein belongs to?
Belongs to the ZipA family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass type I membrane protein. Note=Localizes to the Z ring in an FtsZ-dependent manner.
Protein: DTD_CLOTE
Sequence: MRVVVQRVKSSKVEVDGKIIGSIKGGLNVLLGICKGDTQKDIEYLVDKILGLRIFEDECGKMNKSLLDVKGELLVISQFTLYGDCRKGKRPSFIEALGGEEAKKLYEEFIKKCKEVLGEVQMGEFGADMLVSIENDGPVTLMIDSKKVF
What is the function of this protein?
An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs.  Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS.  Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site.  By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
What are the official names of this protein?
D-aminoacyl-tRNA deacylase, DTD, Gly-tRNA(Ala) deacylase.
What is the protein family that this protein belongs to?
Belongs to the DTD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CPCF_NOSS1
Sequence: MTNELINGVALADTPEKLVKAVQELALAKDVAAIPTLIAVFGYNNPTAAAIASTALVQLGEVAVPQLLTQIDDYNYGARAYSIRTLAAIADPRALDVLIDAAATDFAPSVRRAAAKGLGNLHWHKLEFPDNQTAPKKALETLLFISQDAEWSIRYAAIVGLQGLVNIPDLQQPIHTRLKEMLASDAEKAVRARILLAQSQ
What is the function of this protein?
Required for the chromophorylation of the CpcA gene product.
What are the official names of this protein?
Phycocyanobilin lyase subunit beta, Phycocyanin operon protein CpcF.
What is the protein family that this protein belongs to?
Belongs to the CpcE/RpcE/PecE family.
Protein: PSF3_HUMAN
Sequence: MSEAYFRVESGALGPEENFLSLDDILMSHEKLPVRTETAMPRLGAFFLERSAGAETDNAVPQGSKLELPLWLAKGLFDNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQTGQKGLNDFQCWEKGQASQITASNLVQNYKKRKFTDMED
What is the function of this protein?
Required for correct functioning of the GINS complex, a complex that plays an essential role in the initiation of DNA replication, and progression of DNA replication forks (PubMed:17417653, PubMed:28414293).  GINS complex is a core component of CDC45-MCM-GINS (CMG) helicase, the molecular machine that unwinds template DNA during replication, and around which the replisome is built (PubMed:32453425, PubMed:34694004, PubMed:34700328, PubMed:35585232).
What are the official names of this protein?
DNA replication complex GINS protein PSF3, GINS complex subunit 3.
What is the protein family that this protein belongs to?
Belongs to the GINS3/PSF3 family.
Protein: MURQ_BACAN
Sequence: MLENLSTEHRNEKTMNLDEMNIKEVLQSMNEEDRTVALAVEKEIEHIEKVVRVVIQSFEEEGRLIYIGAGTSGRLGILDAVECPPTFGTDDKMVQGFIAGGLKAFTKAVEGAEDREELAEEDLKSIGLNEKDTVIGIAASGRTPYVIGGLKYANSVGASTASISCNKNAEISKYAKLNVEVETGAEILTGSTRLKAGTAQKLVLNMISTASMIGVGKVYKNLMVDVQSTNEKLVERSKRIIVEATGVSYEVAAEHYEKAERNVKAAIVMVLLQCEYGEALEKLKQAKGFVKKAL
What is the function of this protein?
Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate.
What are the official names of this protein?
N-acetylmuramic acid 6-phosphate etherase, MurNAc-6-P etherase, N-acetylmuramic acid 6-phosphate hydrolase, N-acetylmuramic acid 6-phosphate lyase.
What is the protein family that this protein belongs to?
Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
Protein: TRMB_OCEIH
Sequence: MRQRNKPWADEYLQENNHIVISDPKSKKGNWSQLFNNNNPIHVEIGSGKGQFILGMAKQYPEINFIGIELAKSIIVSAVQKIEEENLANVFMLNENAIDVREMFADDEISMIYLNFSDPWPKNRHEKRRLTYGRFLEQYQDILGANGEVILKTDNRGLFEYSVVSFSQNGMNINEINVDLHAIQDETNVMTEYEEKFSTKGQPIYRCKAAFEK
What is the function of this protein?
Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
What are the official names of this protein?
tRNA (guanine-N(7)-)-methyltransferase, tRNA (guanine(46)-N(7))-methyltransferase, tRNA(m7G46)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
Protein: M1_I79A0
Sequence: MSLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDRAVKLYRKLKREITFHGAKEIALSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRSLRQMVATTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRAIGTHPSSSAGLKDDLLENLQTYQKRMGVQMQRFK
What is the function of this protein?
Determines the virion's shape: spherical or filamentous.  Clinical isolates of influenza are characterized by the presence of significant proportion of filamentous virions, whereas after multiple passage on eggs or cell culture, virions have only spherical morphology.  Filamentous virions are thought to be important to infect neighboring cells, and spherical virions more suited to spread through aerosol between hosts organisms.
What are the official names of this protein?
Matrix protein 1, M1.
What is the protein family that this protein belongs to?
Belongs to the influenza viruses Matrix protein M1 family.
What are the subcellular locations of this protein?
Virion membrane; Peripheral membrane protein; Cytoplasmic side. Host nucleus.
Protein: NANT_YERPB
Sequence: MSISVGPSREDKPLSGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLISAAFISRWFGGLVLGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLIIGIGMAGEYGSSSTYVMESWPKNMRNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRMLFYIGLLPIIFALWLRKNLPEAEDWEKAQSKQKKGKQVTDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVSTLLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPTYLKMDLGYDPHTVGNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIPLFAIQGSSILFLGGLLFLQQMLGQGIAGLLPKLLGGYFDTEQRAAGLGFTYNVGALGGALAPILGASIAQHLSLGTALGSLSFSLTFVVILLIGFDMPSRVQRWVRPSGLRMVDAIDGKPFSGAITAQHARVVTQK
What is the function of this protein?
Catalyzes the proton-dependent transport of sialic acid.
What are the official names of this protein?
Sialic acid transporter NanT, Sialic acid permease, Sialic acid/H(+) symporter.
What is the protein family that this protein belongs to?
Belongs to the major facilitator superfamily. Sialate:H(+) symporter (SHS) (TC 2.A.1.12) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: UBE2C_XENLA
Sequence: MASQNVDPAAASSVASRKGQESGTSAARGSVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAYKKHLHEQYQKQVREKEI
What is the function of this protein?
Catalyzes the covalent attachment of ubiquitin to other proteins.  Acts as an essential factor of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated ubiquitin ligase that controls progression through mitosis.  Acts by initiating 'Lys-11'-linked polyubiquitin chains on APC/C substrates, leading to the degradation of APC/C substrates by the proteasome and promoting mitotic exit.
What are the official names of this protein?
Ubiquitin-conjugating enzyme E2 C, (E3-independent) E2 ubiquitin-conjugating enzyme C, E2 ubiquitin-conjugating enzyme C, UBC-X, Ubiquitin carrier protein C, Ubiquitin-protein ligase C.
What is the protein family that this protein belongs to?
Belongs to the ubiquitin-conjugating enzyme family.
Protein: RRP41_ARCFU
Sequence: MSEFNEKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRYIEVGEEMDEITEGGEDA
What is the function of this protein?
Catalytic component of the exosome, which is a complex involved in RNA degradation.  Has 3'->5' exoribonuclease activity.  Can also synthesize heteromeric RNA-tails (Probable).
What are the official names of this protein?
Exosome complex component Rrp41.
What is the protein family that this protein belongs to?
Belongs to the RNase PH family. Rrp41 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLYA_POLAQ
Sequence: MFDRQNTLAKTDPQLWAAIQNENKRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGYPGKRYYGGCEFVDVAEQLAIDRVKALFGAEAANVQPHCGASANQAVFLAFLKPGDTFMGMSLAEGGHLTHGMALNMSGKWFNPIAYGLDKNEEIDYEQMERLAREHKPKLIIAGASAYSKKIDFERIGKLAKEVGAIFMVDMAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIILMKAEHEKAINSAVFPGLQGGPLMHVIAGKAAAFKEAAEPGFKDYQKQVVANAKALAETLIARGLRIVSGGTDSHVMLVDLRAKKMTGKEAEHVLGEAHITCNKNGIPNDPEKPMVTSGIRLGSPAMTTRGFKEAEAVQVGNFIADVLDNPNDPENIAKVRAQVAELTKRFPVYG
What is the function of this protein?
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier.  This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules.  Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
What are the official names of this protein?
Serine hydroxymethyltransferase, SHMT, Serine methylase.
What is the protein family that this protein belongs to?
Belongs to the SHMT family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GYAR_PYRAB
Sequence: MSKPRVFITREIPEVGIEMLEKEFEVEVWEDEREIPREILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRGEVPPTLVNREVLKVRKPGFQ
What are the official names of this protein?
Glyoxylate reductase.
What is the protein family that this protein belongs to?
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GyaR subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: URE2_RHOPT
Sequence: MIPGELFIEDGEIELNAGRKTVTLTVSNTGDRPIQVGSHYHFFETNPALKFDRGKARGMRLDIAAGTAVRFEPGQSRDVQLVELAGKRTIYGFRGDVMGKL
What are the official names of this protein?
Urease subunit beta, Urea amidohydrolase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the urease beta subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VP4_ROTB2
Sequence: MSLRSLLITTEAVGETTQTSDHQTSFSTRTYNEINDRPSLRVEKDGEKAYCFKNLDPVRYDTRMGEYPFDYGGQSTENNQLQFDLFTKDLMADTDIGLSDDVRDDLKRQIKEYYQQGYRAIFLIRPQNQEQQYIASYSSTNLNFTSQLSVGVNLSVLNKIQENKLHIYSTQPHIPSVGCEMITKIFRTDVDNENSLINYSVPVTVTISVTKATFEDTFVWNQNNDYPNMNYKDLIPAVTKNSIYHDVKRITKIHEYINSKKKKNGVGKIGGIQIAESKDGFWKILTKNYQIKLKFGIEGYGVMGGTFGNWLIDSGFKTVETNYEYQRNGKTINATTVASVKPSRKCGTRSPVFGQLQFSGEMMVLSHNDILTVFYTEREWALSNAIYAKNFATDFKRQFEVTAQSDELLVRTNVVPHTIKNTPGKALMEYSHGGFGQIDTSDYTGMALTFRFRCVSEDLPEGYYDKDKALTFANVGLTSFQDRQETNGTYWVYNTSTVGFGSCYPKKEFEYDINVTYTTLLPSDPEFTTGGTNYAQSVTAVLEESFINLQNQVNEMLTRMNISDLTSGVMSVFSVATSFPQILDGISDLLKAASSAFKKVKGKVGNVAKRLRGKRYVRLFDEDISIEETPRFLDSIRSSRRPSILSNMFNDDETFTALHTLASRTNSVASDVTYIQPIITTRIANSTPPVIAPASSVTYAKLKDISKIINAEIDPKSIMEFNQVSNTISILDSTKKLAQYAVDPDVIDGILNKMVGGHARSLFSLKVRKHLLDAVEKDAFVKYNYHDLMGKLLNDRELLDITNNLSSQKQFELAKEFRDLLINALA
What is the function of this protein?
Forms the head of the spikes and mediates the recognition of specific host cell surface glycans.  It is the viral hemagglutinin and an important target of neutralizing antibodies.
What are the official names of this protein?
Outer capsid protein VP4, Hemagglutinin.
What is the protein family that this protein belongs to?
Belongs to the rotavirus VP4 family.
What are the subcellular locations of this protein?
[Outer capsid protein VP4]: Virion. Host rough endoplasmic reticulum. Host cell membrane. Host endoplasmic reticulum-Golgi intermediate compartment. Note=The outer layer contains 180 copies of VP4, grouped as 60 dimers. Immature double-layered particles assembled in the cytoplasm bud across the membrane of the endoplasmic reticulum, acquiring during this process a transient lipid membrane that is modified with the ER resident viral glycoproteins NSP4 and VP7; these enveloped particles also contain VP4. As the particles move towards the interior of the ER cisternae, the transient lipid membrane and the non-structural protein NSP4 are lost, while the virus surface proteins VP4 and VP7 rearrange to form the outermost virus protein layer, yielding mature infectious triple- layered particles.
Protein: TRPG_MYCTU
Sequence: MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTPERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTSSVFHTNVGVLQGLPDPFTATRYHSLTILPKSLPAVLRVTARTSSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
What is the function of this protein?
Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan.  In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate.  In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia (By similarity).
What are the official names of this protein?
Anthranilate synthase component 2, AS, ASII, Anthranilate synthase, GATase component, Anthranilate synthase, glutamine amidotransferase component.
Protein: TRPF_SYNJB
Sequence: MGRLFVKICGITRQDQAEAIAALGVSALGFIAVPNTPRYLPLSEMARWVGSLPGPVEKVGVFLDQDPRAIAAWVETVGLTAVQLHGQESPQDCQQLGEWLPGIRRIKALRVRQPQDLEVANLYRDCVEMLLLDAYHPQQAGGTGRTLNWPELARLSRERALPLPWLLAGGLNPDNVLQALSHLQPSGIDLSSGVERRPGDKDIDKVRHLLQQLGSQGWEIAPTLPPITPSATG
What are the official names of this protein?
N-(5'-phosphoribosyl)anthranilate isomerase, PRAI.
What is the protein family that this protein belongs to?
Belongs to the TrpF family.
Protein: RNH2_METS3
Sequence: MDVLGIDEAGRGSVLGPLVIAGVIVPEKMDIVLERMGVKDSKRLTPNRRTILSRKLKKMFEYDLVVISAQDIDNMRADGINLNEIERIGMEKILSNLNPEKAIVDAVDIKAERFQNKLANDTGVNVVAEHKADDNYIEVSAASIIAKQERDAHIAEINKDYIKMGGIGSGYPSDPITKKFLTNFTYDEMPDFVRKSWATVEKMKNSQ
What is the function of this protein?
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
What are the official names of this protein?
Ribonuclease HII, RNase HII.
What is the protein family that this protein belongs to?
Belongs to the RNase HII family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RECF_OCEIH
Sequence: MHIEKLELTNYRNYDQLEIAFDDQINVIIGENAQGKTNLMEAIYVLSFARSHRTPREKELIQWDKDYAKIEGRITKRNQSIPLQISITSKGKKAKVNHLEQHRLSDYIGSVNVVMFAPEDLTIVKGAPQIRRRFMDMELGQIQPTYIYHLAQYQKVLKQRNHLLKQLQRKPNSDTTMLEVLTDQLIEHASILLERRFIYLELLRKWAQPIHRGISRELEQLEIQYSPSIEVSEDANKEKIGNIYQMKFAEVKQKEIERGTTLAGPHRDDLIFFVNGKDVQTYGSQGQQRTTALSIKLAEIELIYQEVGEYPILLLDDVLSELDDYRQSHLLNTIQGKVQTFVSTTSVEGIHHETLQQAELFRVTDGVVN
What is the function of this protein?
The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility.  RecF binds preferentially to single-stranded, linear DNA.  It also seems to bind ATP.
What are the official names of this protein?
DNA replication and repair protein RecF.
What is the protein family that this protein belongs to?
Belongs to the RecF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PRMA_LACDB
Sequence: MKLLEIKIESSYDVEDALAYFATEDLKALGTEARRRSDFEQAGWLHDSTVVDMDDIPNLPDELEFIAYFDEETDPEEMVKCFKDKLAELAGYGLKTAPGEISVDYVADQDWNTVWKKYYHVINLSRHLAIVPEWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISRKHD
What is the function of this protein?
Methylates ribosomal protein L11.
What are the official names of this protein?
Ribosomal protein L11 methyltransferase, L11 Mtase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. PrmA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMH_PARL1
Sequence: MSDNGQNSASPHIPVMLADVLDVLKPRDGGVYVDGTFGAGGYTRAILGSADCAVLAIDRDPTAILRGRALATEFAGRLTLIEGRFGDMKRLVRELGHGTVDGVVLDIGVSSMQLDQAERGFSFQQDGPLDMRMGGEGPSAADVVNHFDEADLARIIAVYGEEKRARAVARAIVAARQTAELHRTLELADLVASVIHRKPQDRIHPATRTFQALRIFVNDELGELARGLSGAEDLLHEGGRLAVVAFHSLEDRIVKRFLTARTGRAGRANRYMPERDEVAPSFREIAHKAMKASEEEVEINVRARSAKLRAAERTAAPALPLDLAALGFRAVPTLDGSLA
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GCH1_SALPC
Sequence: MPSLSKEAALVHDALVARGLETPLRPPMDELDNETRKSLIAGHMTEIMQLLNLDLSDDSLMETPHRIAKMYVDEIFAGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILTALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHP
What are the official names of this protein?
GTP cyclohydrolase 1, GTP cyclohydrolase I, GTP-CH-I.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase I family.
Protein: SYG_MYCCT
Sequence: MSKSIEKMISHLKNQGFVFQGSEIYGGLANSWDYGPLGCEVKNKLKKVWWDFFVKKNPLNIGLDSSIILNSKVWKASGHIDGFNDPLIDCKNCKSRWRADKLIEEFDPSINTGIMSNLQLEEYINQNNIVCKKCQKKDFTQIRKFALMFKTNQGVLEDDSSIVYLRPETAQGIFINFKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFFDPNDSNDWFKYWLEQIEIFLTQKISLDKNNYKIRENLKDELAHYALKTSDIEFNFPFGWGELWGISHRSDFDLKVHQNLSKEDLTVLKEENNQKILANVIEPSVGVERLMLAIFWQAYTEEQLEENNSRIVLKLPYNLAPYQVAITPLSKQLNQNANQLFLELLKDFDAIYDETGNIGKRYRRQDAIGTPFVITYDFQTLEDQKVTIRYRDTMKQERILISQLKDFLNSQFN
What is the function of this protein?
Catalyzes the attachment of glycine to tRNA(Gly).
What are the official names of this protein?
Glycine--tRNA ligase, Glycyl-tRNA synthetase, GlyRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SHE9_LODEL
Sequence: MLLPVLRASSRIVMRHSVVFNCIRLQSNKPERSQQINELKLREIIEGTNFGTEATKKRKLEEERKKLEKEREAERQREEKKEREAKLEEANKQNEADFSSTKTGKLKGEDSEVDHKKDEGLRIENKIIATTDSSVDATDIPNIAEEVNETIQKEIGGLPSEKQKKQSALTKKITQYLDSAHDTILTVTRALNDVTGYSAIERLKKSIEEQEEDLKNAKKYVKECKLTYGDAIQKRSHSQREVNELLTRKHNWSPEDLERFTELYRNDHENDVWEKECEKKLEEAELKVDAVQLKLTQLILTRYHEEQIWSDKIRRSSTWGTWVLMGLNVLLFVFATFLVEPWKRKKLVLGFEDKVKTVLVGIAQENDAVLNPIIEKLDQEQKDGSTGHNLEKSGYLTLEDEGGQTTSLPASLDSTSSQPPSAPVLSKEQQGSRILRAKASIKFFILQAQYAIVSSWHRVRVTCVKSYTALTTPSIEFLKLDKVEFGLYTFIISILSCGLGSLATIYCR
What is the function of this protein?
Required for the maintenance of the structure of the mitochondrial inner membrane.  Involved in mitochondrial morphology.  Causes growth arrest when highly overexpressed (By similarity).
What are the official names of this protein?
Sensitive to high expression protein 9 homolog, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the SHE9 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: PGK_STRZT
Sequence: MAKLTVKDVDLKGKKVLVRVDFNVPLKDGVITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKAGKSLAPVAADLAAKLGQDVVFPGVTRGAELEAAINALEDGQVLLVENTRYEDVDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLEKADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGKLILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTEK
What are the official names of this protein?
Phosphoglycerate kinase.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RIBBA_BACC4
Sequence: MFHRIEEALEDLKKGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSHNTDSHHTAFTVSIDHVSTTTGISAHERATTIQELLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAKLCGAEPAGVICEIINEDGTMARVPDLIECAKQFDIKMITIEDLIAYRRHHETLVTREVEITLPTDFGTFHAIGYSNSLDTKEHIALVKGDISTGEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALAQIEREGKGVLLYMRQEGRGIGLLNKLRAYKLQEEGFDTVEANEKLGFPADLRDYGIGAQILKDLGLQSLRLLTNNPRKIAGLQGYDLEVIERVPLQMPAKEENKSYLQTKVNKLGHLLNL
What is the function of this protein?
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
What are the official names of this protein?
Riboflavin biosynthesis protein RibBA.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the GTP cyclohydrolase II family.
Protein: HCAF_ECOLU
Sequence: MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGIQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVNETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
What is the function of this protein?
Part of the multicomponent 3-phenylpropionate dioxygenase.  Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively.
What are the official names of this protein?
3-phenylpropionate/cinnamic acid dioxygenase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family.