PharMolix/UniProtQA huggingface dataset:
Protein: UUP_BUCAI
Sequence: MSLINIHNASLSFSNLQILEKSTFHINKNERVCLIGKNGAGKSTLLKIINKKQDLDEGQIIYKKNTTTAYLEQNNPKNLNISIYDFIALGLKEHEKNKKKHTNEIVKIEKIIELIKLNKNTLLSHLSGGLLRKVALGRVLVREPDILLLDEPTNHLDMKTIKWLETFLKKFSGSILFVSHDRNFIQNVSTRIIDLDRGKLVSWPGDYENFIKLKNESYRIEKIQKQLFDKNLEKEEQWIRKGIKARSTRNEGRVKKLKILQKEQKDYKKIEKINNIEINQSKNYLGKIIFKLDNIDFLVNNKIIIKNFSSIIQHGDKLALIGDNGCGKSTLIKIIIGENKPQKGKIYIGKGLKISYFDQNRSFLNPNKSIIENIDYGKEKILLNSREQHIIRYLKNFLFKPNQLKSLVKTLSGGECNRLLLAQLFLKPSNVLILDEPTNDLDLDTLQLLEKIIIAYKGTVIIVSHDKTFIKNTAKKCWFFEKNGFINTHFSQYDSLKKEKNNFHKEKIQKNKSKINLAIKIKNNFKKELNAILYEIETIELDIKTLQKKVNEPDFFKKTLEEKLPTLKMLAQKERKLGKKILFWEKLEKNIINTKI
What is the function of this protein?
Probably plays a role in ribosome assembly or function.  May be involved in resolution of branched DNA intermediates that result from template switching in postreplication gaps.  Binds DNA and has ATPase activity.
What are the official names of this protein?
ATP-binding protein Uup.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. ABCF family. Uup subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=Associates with ribosomes.
Protein: RM37_RAT
Sequence: MALASGPAMRALAGSARLGLGGYGAPKRGAYEWGVRSTRKPEPRPLDRVYEIPGLEPITYEGKKHFVPWLAKPIFPPWERGWIDPRFHRAAPIHEQPLYKEQPCYIFHQRCRLLEGMKQALWLTKTKLIEGLPKKVLSLVDDPTNHIENQEQRVLDIISHSRLWHSTEDIPKRETYCPLIVDNLLQLCKSQIIKHPSLARRTSAQNCSLATTWNRESLLLQVRGTSSTMLSAKDPLPPIASREEVEATRSHVLETFYPISPTIDLQECHVYEVKEDTGFREGYPYPHPHTLYILEKANLRPQRFLPEQLRAKMLLFAFANALAQARLLYGNTARVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLTSSEGVKNLVWTDSDQLLYQHFWCRPVIKKKVVVEPVGPVDFQPETFKKFLALYLHGAV
What are the official names of this protein?
39S ribosomal protein L37, mitochondrial, L37mt, MRP-L37.
What is the protein family that this protein belongs to?
Belongs to the mitochondrion-specific ribosomal protein mL37 family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: UDP_SALTY
Sequence: MSKSDVFHLGLTKNDLQGAQLAIVPGDPERVEKIAALMDKPVKLASHREFTSWRAELDGKAVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPMEFPAVADFACTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESHAVKIVVEAARRLL
What is the function of this protein?
Catalyzes the reversible phosphorylytic cleavage of uridine to uracil and ribose-1-phosphate.
What are the official names of this protein?
Uridine phosphorylase, UPase, UrdPase.
What is the protein family that this protein belongs to?
Belongs to the PNP/UDP phosphorylase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y2318_METBF
Sequence: MTKEVLIHQIIDVLARAGFALSDRCNIRPRSFDVAARKDETLLLCKVLFNIDGLNEETAREMKYLAEYLGGSAIVVGAKTRDQMLEDSVVYMRYDILALNVQTLYDYFIENVPPLVSAAPGGLYVSIEGDILKKARMGQSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFGVELAKPINILKSCGSRKPRKKAESRTETQEKPYTLLPEDLILNTISMLGYDVLPTTQAPFKAISRDKSSVILTGVSEFNTTVVKRAHLMSSISCVTETQSVFIINGHSKIKSVENTVMIEKKELDKISDSQELLNFIEERRETHDEK
What are the official names of this protein?
Putative HTH-type transcriptional regulatory protein Mbar_A2318.
Protein: URE1_BURVG
Sequence: MTLRLSRRAYAEMFGPTTGDRVRLADTELLIEIERDYTIYGEEVKFGGGKVIRDGMGQSQRVAADVPDTIITNAVILDHWGIVKADIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEVIAGEGLIVTAGGIDTHIHFISPQQIDEALASGVTTMLGGGTGPATGTNATTCTPGPWHMERMLQAADGWPINLGFLGKGNVSVPQPLVEQIAAGAIGLKLHEDWGTTPAAIDNCLSVADDTDTQVAIHTDTLNEGGFVESTVAAFKGRTIHTYHTEGAGGGHAPDILKVCGESNVLPSSTNPTRPYTINTLDEHLDMLMVCHHLDPSIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQAMGRVGEVIIRTWQTAHKMKVQRGALPEDNARNDNFRAKRYVAKYTINPAITHGIAHEVGSIEPGKWADLVLWEPAFFGIKPSMILKGGMIAMAQMGDPNASIPTPQPVHYREMFATRGGALARTSLTFVSQMAADAGIAERYGLAKWIVPVRNCRNVTKADMIHNAWRPSISVDPETYDVIADGQLLTCEPATVLPMAQRYFLF
What are the official names of this protein?
Urease subunit alpha, Urea amidohydrolase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TIP13_ARATH
Sequence: MPINRIAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGSNGHEPLPSNDF
What is the function of this protein?
Potential aquaporin, which may facilitate the transport of water and small neutral solutes across cell membranes.
What are the official names of this protein?
Aquaporin TIP1-3, Gamma-tonoplast intrinsic protein 3, Gamma-TIP3, Tonoplast intrinsic protein 1-3, AtTIP1;3.
What is the protein family that this protein belongs to?
Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
What are the subcellular locations of this protein?
Vacuole membrane; Multi-pass membrane protein. Note=Tonoplast.
Protein: HEM3_CYTH3
Sequence: MNKTVRIGTRGSKLALWQAEHVAACLQTKGLEPQIVIIDTTGDKILDQSLSKIGSKGLFTEELEEQLHAGTIDIAVHSAKDLQTHLKGGMYILAITERELVNDVLVSHKPIDTLKNNPDLIIGTSSTRRRALLRKFYPQAKMVDMRGNLQTRIRKMEEGACDAMLLAYAGMHRMGYDSLIKEKLSLEEFIPAAGQGTLAIEAASTLDKEKAAVIRAVLNDAATETAVSAERAFLRTLEGGCSIPVFALAVERDTDYLLTGGIVSLDGTKYLRKEIRFTAADAEQRGVELATVLLKDGADEILAEIKKGLSKS
What is the function of this protein?
Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
What are the official names of this protein?
Porphobilinogen deaminase, PBG, Hydroxymethylbilane synthase, HMBS, Pre-uroporphyrinogen synthase.
What is the protein family that this protein belongs to?
Belongs to the HMBS family.
Protein: ATPD_FERNB
Sequence: MMYSAIASKYALALYNISKTNGKTETYKELLNILGDIYNLASVYLNNQAIKPENRVQFVLNIMKELKIEYDEIFRKFINLLIVNKRLKYINQIISFFDYTILEDKGLIPVNVTSAMELSKEEEEILSKFVEKYTNRKPVFNVTVDDSLIAGVVVEFAGKTLDVTVKGRLQNIARNILNREG
What is the function of this protein?
This protein is part of the stalk that links CF(0) to CF(1).  It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.
What are the official names of this protein?
ATP synthase subunit delta, ATP synthase F(1) sector subunit delta, F-type ATPase subunit delta, F-ATPase subunit delta.
What is the protein family that this protein belongs to?
Belongs to the ATPase delta chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RSMA_THEVB
Sequence: MIRARKRFGQHWLRSEAILAQIIAAAELHPGDRVLEIGPGRGALTRPLLVSGAEVVAVELDRDLCGQLRRQFDSERFQLIEGDILRLDLAPLGCNKVVANIPYNITGPLLGHLLGSIARPRRPAFERLILLVQKEIGDRLMASPGSKAYGALSVRVQFLATCEKVCAVPPRAFQPPPKVDSVVVCLRPHRTLPRVGSPQWLETLLKQGFATRRKMLANALKSLVEPEQVRQALLQLGRDANSRAEALSLEDWLALSEVLRQLQQN
What is the function of this protein?
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle.  May play a critical role in biogenesis of 30S subunits.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase A, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase, 16S rRNA dimethyladenosine transferase, 16S rRNA dimethylase, S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: 6PGL_XYLFT
Sequence: MIPTNDAHITLMNYDDPLEWAQSVTRELENILLQEITQRGRASLLLSGGTTPALVYETLATRPLDWSKIDIGLVDERWLSPQDKDSNAWLVRHTLLEHAKHATFLPLIRPGKTLNQCVHDANLQITHSPPPCAVVLGMGNDGHTASLFPGSLDLQKAINTPQPYVALDATGCPGAGVWPLRITLTPAGLNNIPHRLLLLRGKQKLKVLETALSCKDALDYPIRTAIDLPNARLRVHWCA
What is the function of this protein?
Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
What are the official names of this protein?
6-phosphogluconolactonase, 6PGL.
What is the protein family that this protein belongs to?
Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
Protein: UPPP_CAMFF
Sequence: MDFLNAVILGIVEGLTEFLPVSSTGHMILSAKLLGLEQTSVLKCFEVVIQLGSILAVVFMFFDRLKEDFNLWIKLAIGFVPTAIIGFLAYKHIKTFFEPSTVAYMLIIGGIVFIVVELWHKKINYEGDTKTLHEVSFKQAFIIGLSQCFAMIPGTSRSGSTIITGLLCGLSREVAARFSFLLAIPTMFAATAYDSYKNADIFVQNKEALWIFLVGGFMAFIVALIVIKLFLKFVSKFSYISFGIYRIILGSIFLIYIL
What is the function of this protein?
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP).  Confers resistance to bacitracin.
What are the official names of this protein?
Undecaprenyl-diphosphatase, Bacitracin resistance protein, Undecaprenyl pyrophosphate phosphatase.
What is the protein family that this protein belongs to?
Belongs to the UppP family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: LONM_CAEBR
Sequence: MYRAGALVLRSATLRRTRFLAAHQNFATISSQRSSVLLAKSLESSIGGAGNQKKFYSSKDHDDPIAVDDSLELYKDLGGMSPIQVPADMPNVPILAINRYPLFPGFIKKVDIVKDDNLKALIRRQLSLKQPYAGVFVKKDDENKEETIVSLSEVYPTGSFVQIIEVRDQGSVLELVLSAHRRIRVIEPIEDVVAPKTDTPLNGRRARGKRAGLPPTPPPTPPLSTPTSAPEASATSPEEKEEKKDPERKGIVMVRTENVVADPVPKNNETKATMMAIVQTIRDVVQFNQLFGQQINLLLHPSQNVIDNPVYLCDLVATLVQSAETKDLQEMMDETDVSKRLKIALLLIQKEKAVAKLKHDINKDVEKKVQDHHRKYLLNEQLKVIKKELGIEKDEKTTIIEKIDERMKTLAVPEYALKVINEEKTKLQFLDPHSSEFSVTRNYLEWLTSVPWGLTSPENRRLSHAKKALDEGHYGMKDVKERIMEFIAVNLLRKSVGGKILCFHGPPGVGKTSIAKSIANALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKMIQCMKKVKTENPLVLIDEVDKIGGAGFHGDPASALLELLDPEQNANFNDHFLDVPVDLSRVLFICTANEISKIPGPLRDRMEMIDVSGYLAEEKVAIAHQHLIPQLRKETSLSADQLNIEDSALEELIKHYCRESGVRNLQQHIERIFRKAALQIAEQQPEDEQPAATTAISENSDAEPVSTPSDPPTFTPEKINISTENLQKFVGRPKFTSDRMYEVTPPGVIMGLAWTAMGGSALYIETVLKRPVDVTSDKDGSIETTGNLGDVMKESVRTALTVSKGILAREQPDNKFFDKSHIHIHVPEGATPKDGPSAGVTLVSSLLSLALNRPVVQDMAMTGEISLTGKVLPVGGIREKIIAARRVGAKRVFLPAENRRDFDDLPEFMKSELDIRFVSHYDELYEHLFQ
What is the function of this protein?
ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix.  May also have a chaperone function in the assembly of inner membrane protein complexes.  Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome.  Binds to mitochondrial DNA in a site-specific manner.
What are the official names of this protein?
Lon protease homolog, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the peptidase S16 family.
What are the subcellular locations of this protein?
Mitochondrion matrix.
Protein: RISC_METTH
Sequence: MIKVGICDTTFARYDMGGAAIDELKKHTAGIKIIRRTVPGIKDLPVACKKLIEEEGCEMVMALGMPGPEEKDKVCAHEASTGLIQAQLMTNTHILEVFVHEDEEDDPEELKVLADNRAREHAQNLIMMLFKPDRLTREAGMGLREGKPDAGPL
What are the official names of this protein?
Riboflavin synthase.
What is the protein family that this protein belongs to?
Belongs to the DMRL synthase family.
Protein: Y900_AQUAE
Sequence: MTRVLLRTFPPGAKPPVRNSWVCMRKTESTTYSSKNQGAQVMVAVMKFSEDIPLTTLLETAPECEEILMKYGLQKIKEDGVYEIVVPRLTLRGFITLMNLKEKERDELVSKLEEIYNKKLSGG
What are the official names of this protein?
Uncharacterized protein aq_900.
Protein: G1PDH_STAMF
Sequence: MLNRSIHEITLPLKVIIGSNILDKIPDYLLKMKLTNQYKAGIITGPTTYNVAGKIVEEAMKNNGYIVEVWKARDARIETANQIVEETKKHGIKIFLGVGGGKSIDLAKYAAYKNNGYMISVPTAASHDGIASPFASLKGTSKPTSTPTTTPYAIIADIDMISKAPPRLIRSGVGDLLGKLTAVKDWQLAHRLKGEYYGEYAAQLALLSAKHVIRYHELIASGNPDGIRIVVEALISSGVAMCIAGSSRPASGSEHLFSHALDLLAPGKALHGEQVALGTIMMLYLYGDPKWKKIKRIMKKIGLPTTAEEIGIPIETIVKALTIAHKIRPNRYTILGEKGLTEEAAWRLVRETGII
What is the function of this protein?
Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P).  The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea.
What are the official names of this protein?
Glycerol-1-phosphate dehydrogenase [NAD(P)+], G1P dehydrogenase, G1PDH, Enantiomeric glycerophosphate synthase, sn-glycerol-1-phosphate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the glycerol-1-phosphate dehydrogenase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NIKD_ECO57
Sequence: MPQQIELRNIALQAAQPLVHGVSLTLKRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHAVTRSLVSAHLALYGMELAS
What is the function of this protein?
Part of the ABC transporter complex NikABCDE involved in nickel import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Nickel import ATP-binding protein NikD.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: SSPH2_GEOTN
Sequence: MDVRRAQEIASSPVMANVTYNGQRIYIEHVDQQKGVATIHPLDNPSQKQSVPVASLEEHS
What are the official names of this protein?
Small, acid-soluble spore protein H 2, SASP H 2.
What is the protein family that this protein belongs to?
Belongs to the SspH family.
What are the subcellular locations of this protein?
Spore core.
Protein: RECX_TRIL1
Sequence: MTGSNQPSDCYLAALRLLTGRDYTCAALRRKLQQKRFAAEEAQQAVERLIREGYLQDQRYAERLVAAVRQNGSFTGYRLQQELRRRGVPPELIDQVLRESPADGDELERARHLVERRYAGFDPQAADERQLRRVAGFLQRRGYRSDLIRQLFEK
What is the function of this protein?
Modulates RecA activity.
What are the official names of this protein?
Regulatory protein RecX.
What is the protein family that this protein belongs to?
Belongs to the RecX family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: COAD_BUCAT
Sequence: MNKTAIYPGTFDPITYGHLDIITRATKIFDSITIAISNNFTKKPIFNLKERIELTRKVTLHLKNVKKILGFNDLLANLAKKEKANILIRGVRTIFDFDYEIKLAAINKQIYPDLDSIFLLSSKEVSFISSSFVKEIAKYKGDIKPYLPKEAHSALLRKLNNDSIK
What is the function of this protein?
Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
What are the official names of this protein?
Phosphopantetheine adenylyltransferase, Dephospho-CoA pyrophosphorylase, Pantetheine-phosphate adenylyltransferase, PPAT.
What is the protein family that this protein belongs to?
Belongs to the bacterial CoaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LUXS_STRPN
Sequence: MSKEVIVESFELDHTIVKAPYVRLIGEETGPKGDIISNYDIRLVQPNEDSIPTAGLHTIEHLLAKLIRTRIDGMIDCSPFGCRTGFHMIMWGRHTSAKIAAVIKDSLKEIAETTTWEDVPGTTIESCGNYKDHSLFSAKEWAKLILEQGISDDAFERHVI
What is the function of this protein?
Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment.  The regulation of gene expression in response to changes in cell density is called quorum sensing.  Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD) (By similarity).
What are the official names of this protein?
S-ribosylhomocysteine lyase, AI-2 synthesis protein, Autoinducer-2 production protein LuxS.
What is the protein family that this protein belongs to?
Belongs to the LuxS family.
Protein: RS11_SALTO
Sequence: MPPKARAGAAVKKVRRKERKNVAHGQAHIKSTFNNTIVSVTDPTGAVISWASAGQVGFKGSRKSTPFAAQLAAEAAARRAMEHGMRKVDVFVKGPGSGRETAIRSLQAVGLEVGQISDVTPQPHNGCRPPKRRRV
What is the function of this protein?
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA.  Forms part of the Shine-Dalgarno cleft in the 70S ribosome.
What are the official names of this protein?
30S ribosomal protein S11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS11 family.
Protein: RL23_METAC
Sequence: MSSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQILEDVEKMYGFKVKSVRTMTTMKGMKKAVLAFEEPEAAHEIATRIGLM
What is the function of this protein?
Binds to 23S rRNA.  One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.
What are the official names of this protein?
50S ribosomal protein L23.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL23 family.
Protein: ATP6_YEAST
Sequence: MFNLLNTYITSPLDQFEIRTLFGLQSSFIDLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWGLYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLINLFTLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLKDAVYLH
What is the function of this protein?
Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain.  F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk.  During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.  Key component of the proton channel; it may play a direct role in the translocation of protons across the membrane.
What are the official names of this protein?
ATP synthase subunit a, F-ATPase protein 6.
What is the protein family that this protein belongs to?
Belongs to the ATPase A chain family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: NUSB_SODGM
Sequence: MKPAARRRARECAVQALYSWQLSHNDIADIEVQFLAEQDTSDVDVAYFRDLYAGAATNAQELDKLMAPYLSRQLEELGHVERAVLRIALFELSKRQDVPYKVAINEAIELAKTFGAEESHKFINGVLDKVAPQIRPNRK
What is the function of this protein?
Involved in transcription antitermination.  Required for transcription of ribosomal RNA (rRNA) genes.  Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
What are the official names of this protein?
Transcription antitermination protein NusB, Antitermination factor NusB.
What is the protein family that this protein belongs to?
Belongs to the NusB family.
Protein: FOLD_XANOP
Sequence: MTASAPAASTSARLLDGRRIAEELLDGLKSRVDARLAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLPQCTSEAELAALIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLSHTDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVIDVGINRLDDGRLVGDVGFDAAAQRAAWITPVPGGVGPMTVATLMQNTIEAADAAGIEGAGVGIR
What is the function of this protein?
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
What are the official names of this protein?
Bifunctional protein FolD.
What is the protein family that this protein belongs to?
Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
Protein: SYS_SHEB2
Sequence: MLDPKFLRNELEVTAERLATRGFILDIAHLTQLEEKRKLLQVATEELQASRNAISKSIGQAKARGEDVEAIMAQVGDLGSQLDARKIELAAVLEEVNAIAMSMPNLPDESAPIGADETENVEVRRWGTPRTFNFPIKDHIDLGEGLNGLDFKNAVKITGSRFIVMKGQVARLNRAIGQFMLDLHTIEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVKPEDSMAALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPAQNTYREISSCSNMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSITIPEVLRPYMGGLTQIG
What is the function of this protein?
Catalyzes the attachment of serine to tRNA(Ser).  Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
What are the official names of this protein?
Serine--tRNA ligase, Seryl-tRNA synthetase, SerRS, Seryl-tRNA(Ser/Sec) synthetase.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SSRP_MYCS5
Sequence: MKIIATNKNAKRNYEILKTFEAGIKLEGWEVKSARASSVELKNAYCSIYKDEVFLKESYFKKYMLLKVEETKNRKLLLHKKEILKIKQELQKNLSLIPTKIYFNSNSLIKVELALGRGLKKYDKREKLKKEEVEKKLKKILKF
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: TX132_LYCSI
Sequence: MMKVLVVVALLVTLISYSSSEGIDDLEADELLSLMANEQTRKECIPKHHECTSNKHGCCRGNFFKYKCQCTTVVTQDGEQTERCFCGTPPHHMAAELVVGFGKKIFG
What are the official names of this protein?
U1-lycotoxin-Ls1q, Toxin-like structure LSTX-A32.
What is the protein family that this protein belongs to?
Belongs to the neurotoxin 19 (CSTX) family. 04 (U1-Lctx) subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: PLIA_BOTJA
Sequence: MRLILLSSLLLLGIFLANGHEQDPDGKVLNSLIDALMHLQREFANLRGAFLTVHKARSFGSGSERLYVTNKEIKNFEALRQICEQAEGHIPSPQLENHNKAFANVLERHGKEAYLVVGDSANFTNWAAGEPNKAAGACVKADTHGSWHSTSCDDNLLVVCEFYFIL
What is the function of this protein?
This phospholipase A2 inhibitor binds directly phospholipase A2 in the presence or absence of calcium.
What are the official names of this protein?
Phospholipase A2 inhibitor, alpha-PLI.
What is the protein family that this protein belongs to?
Belongs to the alpha-type phospholipase A2 inhibitor family.
What are the subcellular locations of this protein?
Secreted. Note=Secreted in plasma.
Protein: LAMB3_HUMAN
Sequence: MRPFFLLCFALPGLLHAQQACSRGACYPPVGDLLVGRTRFLRASSTCGLTKPETYCTQYGEWQMKCCKCDSRQPHNYYSHRVENVASSSGPMRWWQSQNDVNPVSLQLDLDRRFQLQEVMMEFQGPMPAGMLIERSSDFGKTWRVYQYLAADCTSTFPRVRQGRPQSWQDVRCQSLPQRPNARLNGGKVQLNLMDLVSGIPATQSQKIQEVGEITNLRVNFTRLAPVPQRGYHPPSAYYAVSQLRLQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSLSPQCNQFTGQCPCREGFGGLMCSAAAIRQCPDRTYGDVATGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGYCNRYPVCVACHPCFQTYDADLREQALRFGRLRNATASLWSGPGLEDRGLASRILDAKSKIEQIRAVLSSPAVTEQEVAQVASAILSLRRTLQGLQLDLPLEEETLSLPRDLESLDRSFNGLLTMYQRKREQFEKISSADPSGAFRMLSTAYEQSAQAAQQVSDSSRLLDQLRDSRREAERLVRQAGGGGGTGSPKLVALRLEMSSLPDLTPTFNKLCGNSRQMACTPISCPGELCPQDNGTACGSRCRGVLPRAGGAFLMAGQVAEQLRGFNAQLQRTRQMIRAAEESASQIQSSAQRLETQVSASRSQMEEDVRRTRLLIQQVRDFLTDPDTDAATIQEVSEAVLALWLPTDSATVLQKMNEIQAIAARLPNVDLVLSQTKQDIARARRLQAEAEEARSRAHAVEGQVEDVVGNLRQGTVALQEAQDTMQGTSRSLRLIQDRVAEVQQVLRPAEKLVTSMTKQLGDFWTRMEELRHQARQQGAEAVQAQQLAEGASEQALSAQEGFERIKQKYAELKDRLGQSSMLGEQGARIQSVKTEAEELFGETMEMMDRMKDMELELLRGSQAIMLRSADLTGLEKRVEQIRDHINGRVLYYATCK
What is the function of this protein?
Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.
What are the official names of this protein?
Laminin subunit beta-3, Epiligrin subunit bata, Kalinin B1 chain, Kalinin subunit beta, Laminin B1k chain, Laminin-5 subunit beta, Nicein subunit beta.
What are the subcellular locations of this protein?
Secreted, extracellular space, extracellular matrix, basement membrane.