PharMolix/UniProtQA huggingface dataset:
Protein: ERF35_ARATH
Sequence: MGKQINIESSATHHQDNIVSVITATISSSSVVTSSSDSWSTSKRSLVQDNDSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEEDVGFRFEEPFNWQND
What is the function of this protein?
Probably acts as a transcriptional activator.  Binds to the GCC-box pathogenesis-related promoter element.  May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
What are the official names of this protein?
Ethylene-responsive transcription factor ERF035.
What is the protein family that this protein belongs to?
Belongs to the AP2/ERF transcription factor family. ERF subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: RUVB_BACFN
Sequence: MEEDFNIRDHQLTSRERDFENALRPLSFEDFNGQDKVVDNLRIFVKAARLRAEALDHVLLHGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLSPVVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINLHLEYYDDDILSNIISRSAGILDVPCSSQAAGEIASRSRGTPRIANALLRRVRDFAQVKGSGSIDTEIANYALEALNIDKYGLDEIDNKILCTIIDKFKGGPVGLTTIATALGEDAGTIEEVYEPFLIKEGFLKRTPRGREVTELAYKHLGRSLYNSQKTLFND
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time.  Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange.  Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration.  The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration.  Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvB.
What is the protein family that this protein belongs to?
Belongs to the RuvB family.
Protein: RS11B_YEAST
Sequence: MSTELTVQSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKVSAAAGKANKQFAKF
What is the function of this protein?
Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.  The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules.  The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain.  The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel.
What are the official names of this protein?
40S ribosomal protein S11-B, RP41, S18, Small ribosomal subunit protein uS17-B, YS12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y4558_MYCA1
Sequence: MPRTDDDSWEITESVGATALGVAAARAAETESENPLISDPFARVFLDAAGDGMWNWFAAPNLPAQIAEAEPDLKPRMQGMVDYMAARTAFFDNFFLAATRAGVRQVVILAAGLDSRAWRLPFEDGTTVYELDQPRVLEFKATTLAEYGARPTCHLVSVPVDLRHDWPAALRQAGFDAHAPSAWSAEGLLPFLPAAAQQLLFERVQTLAAPGSRIAVEAPGPDFLDEAARERQRQTMQRVRDLMADLEPDRDIPDVQDLWYFEEREDVGDWLGRHGWDVTVTPAPELMARYDRRPPHDIEDATPQTRFVAAQRTERTRPDR
What is the function of this protein?
Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
What are the official names of this protein?
Putative S-adenosyl-L-methionine-dependent methyltransferase MAV_4558.
What is the protein family that this protein belongs to?
Belongs to the UPF0677 family.
Protein: OGG1_THEVO
Sequence: MDFNQYFLPLFQGEASLIINKKVEEFKLFDRKNKDALFEELCFCILAANTSARMALDMQNRIGKGFLYLSENELREKLKAFKYRFYNVRPRYIVESRDIVDELPYIVSMDNKEEARDLLVENVYGFGYKEASHFLRNVGVFDFAILDKHILEWLSRYFQVKKNTSRKNYLYNESIFREIAKSVGMEPGVLDLYIWYMETGTVIK
What is the function of this protein?
Catalyzes the excision of an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 8-oxoG) from DNA.  Also cleaves the DNA backbone at apurinic/apyrimidinic sites (AP sites).  Prefers oligomers containing 8-oxoG:C, 8-oxoG:T and 8-oxoG:G base pairs, and is less effective on oligomers containing 8-oxoG:A mispairs.
What are the official names of this protein?
8-oxoguanine DNA glycosylase/AP lyase.
What is the protein family that this protein belongs to?
Belongs to the type-2 OGG1 family.
Protein: MSHR_SAIOE
Sequence: MPIHGAPRKLLGSLNSTPTATPKLGLAANHTGAPCLEVSIPDGLFLSLGLVSLVENVLVVAAIAKNRNLHSPMYCFICCLALSDLLVSGSNMLEMAVVLLLEGGALATRASVVQQLHNTIDVLTCSSMLCSLCFLGAIAVDRHISIFYALRYHSIMTLPRAQRVIAAIWVASILSSTLFITYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGITRLHKRQPPAHQGFGLRGAATLTILLGIFFLCWGPFFLHLKLVVFCPQHLTCSCIFKNFKVFLTLIICNTIIDPLIYAFRSQELRRTLKEVLLCSW
What is the function of this protein?
Receptor for MSH (alpha, beta and gamma) and ACTH.  The activity of this receptor is mediated by G proteins which activate adenylate cyclase.  Mediates melanogenesis, the production of eumelanin (black/brown) and phaeomelanin (red/yellow), via regulation of cAMP signaling in melanocytes.
What are the official names of this protein?
Melanocyte-stimulating hormone receptor, MSH-R, Melanocortin receptor 1, MC1-R.
What is the protein family that this protein belongs to?
Belongs to the G-protein coupled receptor 1 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: DNLJ_FRATW
Sequence: MTPNEFFSIKYHILAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSVLDRVGGEVLAGFETIKHKKKMTSLANVFSLEELRDFYDKIEYDIELECEPKMDGLAISIFYKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVRGEIILDKQSFLSLNEYMQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFSKDFVYPETQFELMQLLQSFGFTISDNMFLAKNFSEVEEYHHKMSHQRADLAYDIDGLVFKVNNIKLQDTIGYTARGPKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGGVIVSNATLHNINEIKRKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQMVEMPTNCPVCDSKIENVNDQAIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKYPADIYKLNFEQLTGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALANHFGSLESFRDAKFEELIEINDIGEIMANNIVSFWHDSLNIKIVEEFLAIGIKIQNPVKVEHAYNESFTGKTVVITGSFENYGRTELTQLLKSIGAKVTSSVSKKTDMVICGDNAGSKLTKAQELGVEVILEDNLKDLL
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
Protein: NS1_FPV19
Sequence: MSGNQYTEEVMEGVNWLKKHAENEAFSFVFKCDNVQLNGKDVRWNNYTKPIQNEELTSLIRGAQTAMDQTEEEEMDWESEVDSLAKKQVQTFDALIKKCLFEVFVSKNIEPNECVWFIQHEWGKDQGWHCHVLLHSKNLQQATGKWLRRQMNMYWSRWLVTLCSVNLTPTEKIKLREIAEDSEWVTILTYRHKQTKKDYVKMVHFGNMIAYYFLTKKKIVHMTKESGYFLSTDSGWKFNFMKYQDRHTVSTLYTEQMKPETVETTVTTAQETKRGRIQTKKEVSIKCTLRDLVSKRVTSPEDWMMLQPDSYIEMMAQPGGENLLKNTLEICTLTLARTKTAFELILEKADNTKLTNFDLANSRTCQIFRMHGWNWIKVCHAIACVLNRQGGKRNTVLFHGPASTGKSIIAQAIAQAVGNVGCYNAANVNFPFNDCTNKNLIWIEEAGNFGQQVNQFKAICSGQTIRIDQKGKGSKQIEPTPVIMTTNENITIVRIGCEERPEHTQPIRDRMLNIKLVCKLPGDFGLVDKEEWPLICAWLVKHGYQSTMANYTHHWGKVPEWDENWAEPKIQEGIISPGCKDLETQAASNPQSQDHVLTPLTPDVVDLALEPWSTPDTPIAETANQQSNQLGVTHKDVQASPTWSEIEADLRAIFTSEQLEEDFRDDLD
What is the function of this protein?
Multifunctional protein which displays endonuclease and helicase activities required for initiating and directing viral DNA replication.  Also plays a role in viral packaging and transactivation of several promoters.  Binds site-specifically to 2-3 approximate tandem copies within the origins of replication (Ori), unwinds this hairpin region and nicks one DNA strand thereby initiating the rolling circle replication (RCR).  Cooperatively binds Ori with host PIF and probably other host factors, which activate the nickase function of NS1.  Becomes covalently attached to the 5' end of the nick and provides a 3'OH for priming DNA synthesis.  The helicase activity unwinds DNA in a 3'-5' direction on the longer strand.  Inhibits the host cell cycle during the G1/S transition, the S-phase, and the G2/M transition.  These arrests may provide essential cellular factors for viral DNA replication.  Promotes apoptosis in host cell.
What are the official names of this protein?
Initiator protein NS1, NS1, NCVP1, Non-capsid protein NS-1, Non-structural protein 1, Non-structural protein NS1.
What is the protein family that this protein belongs to?
Belongs to the parvoviruses initiator protein NS1 family.
What are the subcellular locations of this protein?
Host nucleus.
Protein: SYR_EXISA
Sequence: MSYERKYAEALSRVIGEELTIDQIEALIEKPKHEAHGDLAFPCFQLAKAYRKAPVMIATDIANELNDELFTKVEAAGPYVNVFLSRDVVSKEIINTVLEEKSEYATHEARNETIVTDFSSPNIAKPFSMGHLRSTVIGNAINQIARKNGYDVVGVNHLGDWGTQFGKLMVAYKKWGDEEAVRANPIAELLKLYVHFHEEAKTQPELEDEGRAWFKKLEDGDAEATELWQWFRDESLKEFQKVYDLLGVKFESFNGEAFYNDKMGRVVEMLEAKNLLVESEGAMVVSLEEENLPPCLIKKKDGATLYATRDLAAAIYRYETYNFVQANYVVGGEQALHFKQLFSVLRKLGYDFVDGMHHVPFGLILQEGKKMSTRKGRIVLLEEVLKEAIEKAQANIEQKNPDLANAQDVARMVGVGAVVFHDLKNERINNIEFDLDSMLKFEGETGPYVQYTNARANSLLRKGNYDGSPFTGADDDYSWGVVTMLNAFPHVITRAHERREPSIISRYVLDLAQAFNKYYGHVRVLEEDAGKQSRLALVKAVTLVLTEGLRLLGVEAPEEM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NIFE_METTM
Sequence: MNHSTGNCSSKENFSADTTADLKVEEVPEAVINTLSPRREHFTRSCSGGGPRCNRESLPGMVTQRSCVYGGARVVLMPITDAAHLVHGPVGCAACTWDIRGSRSSKSELYRMGFSTGLEEKDVVFGGEDKLLECILEINEIHSPSAIFVYSTCVSGVIGDDIAAVCRTAENKTGKWVIQVQSEGFRSFNKSLGHQLACDVILRHIIGRGDAEVRENSVNLVGEFNVAGDLWEIKGLLEKMGIHVVSSITGDSTVAEISEAHTAQLNIVQCSKSSGYIAEEMKRKYGIPYINVNFFGIKETMDSLLSISDFFDLNAEERISSMAEKTHEMIRGYRRALEGKKVAIYVGGNKAWSLIRAFRDLGMEVIMSGTQNGLPEDYLKIMEKSGRELILFDDANPVELSELLRKYRPDLVVSGAKEKYLSYKLGIPFCEFNHDRIKPFSGFGGFLNFAEEVKRTLESPIWTLASKKRLSGPGGMSGEA
What is the function of this protein?
This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor).
What are the official names of this protein?
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE.
What is the protein family that this protein belongs to?
Belongs to the NifD/NifK/NifE/NifN family.
Protein: G1_ORYSJ
Sequence: MSSSSAAALGSDDGCSPAELRPSRYESQKRRDWQTFTQYLAAHRPPLELRRCSGAHVLEFLRYLDRFGKTRVHEPPCPSYGGRSPSAAGPVAAAAAACQCPLRQAWGSLDALVGRLRAAYDERHGRAGEPDAVAGAGAVATDSTSSSSAAAANPFAARAVRLYLRDVRDAQAMARGISYHKKKKRRGGNMNGARGGGGGGARAGVNDGDATAPPVAVTPGLPLPPLPPCLNGVPFEYCDFGSVLGGAHGAHGGHGGGGGGFYGAGVYLPFLYNTFS
What is the function of this protein?
Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light (By similarity).  Transcription regulator that restrains empty glumes growth, lemmas of the sterile florets located at the lateral side of the rice spikelet, to maintain their small size, probably by repressing lemma identity via transcription regulation.
What are the official names of this protein?
Protein G1, Protein ELONGATED EMPTY GLUME.
What is the protein family that this protein belongs to?
Belongs to the plant homeotic and developmental regulators ALOG protein family.
Protein: RIN1_RAT
Sequence: MEDPGETEAHPLGATSLNFVPGYQQEEKPSPDPLYDTPDARGVQAGGSQQPARTVSLRERLLITRPVWLQLRANAAAALHVLRTEPPGTFLVRKSNTRQCQTLCVRLPEASGPSFVSSHYLQESPGGISLEGSELTFPDLVQLICAYCHTRDILLLPLPLPRAIHQAATHKELEAISHLGMEFWSSSLNTKNQQRPSEAPQIPRLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLPGTSSSQTERLPPRQLLQRESSVGYRVPGSASGPSLPPLPSLQEVDCCSPSSSEEEGSSGSPTTSPRLSRPRHRRPLLRSMSSAFCSLLAPERQVGRAATMLMQNRYTAVGQLVQDLLTQVRVGPESRELQGIRQALSRARAMLSAELGPEKLLPPERLELVLEKSLHRSVLKPLRPILAARLRRRLSTDGSLGRLAEGFRLARTQGPGAFGSHLNLSSPVEIEPVRQKLLQLLRAYSPSAQIKWLLQACKLLYTALKTQAGENAGADEFLPLLSLVLAQCDLPDLLLEAEYMSELLEPTLLTGEGGYYLTSLSASLALLSGLSQAHALPLSPAQELQRSLALWEQRRLPATHNFQHLLRVAYQDPSTGCTSKTLAVPPGSSIATLSQLCATKFRVTQPDAFGLFLYKDQGYHRLPPEALVHRLPTTGYLIYRRAERPETQRAATEKTKTGNERPERGAWEEEKGGLNGEGKSEIAVDQEGKDQARGGHMQLEEQKAEGCPALEE
What is the function of this protein?
Ras effector protein, which may serve as an inhibitory modulator of neuronal plasticity in aversive memory formation.  Can affect Ras signaling at different levels.  First, by competing with RAF1 protein for binding to activated Ras.  Second, by enhancing signaling from ABL1 and ABL2, which regulate cytoskeletal remodeling.  Third, by activating RAB5A, possibly by functioning as a guanine nucleotide exchange factor (GEF) for RAB5A, by exchanging bound GDP for free GTP, and facilitating Ras-activated receptor endocytosis (By similarity).
What are the official names of this protein?
Ras and Rab interactor 1, Ras interaction/interference protein 1.
What is the protein family that this protein belongs to?
Belongs to the RIN (Ras interaction/interference) family.
What are the subcellular locations of this protein?
Cytoplasm. Membrane. Cytoplasm, cytoskeleton. Note=Some amount is membrane- associated.
Protein: NSUN2_DROME
Sequence: MGRNQKQNFFAARKRQKRENGPKRTDRQAQPYEEIKRDNAFFIKYYQLQKICATDEEWTQFLASIRDNLPTTFRVTGFKDEAKALLSIIETQLFTEYVRAVAELHQKAPEDVERPLCLPWYPNGLAYQLHLTRKDIRRSEPLYRLHNFLIVETTAGGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAAPEEHKIPPGFVLANDVDNNRCYMLVHQAKRLNSPCLLVTNHDSSVFPNLVTTKPDGSKAILKFDKILCDVPCSGDGTLRKNPDIWLKWNLAQAYNLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENEAVLQRIIKDADGALELVDAGHLVPGLKYKPGMTDWKLATKEVDQIFTRFEEVPESLHTIIRPGMFPLPADEMAKIGLEKCLRVLPHLQDSGGFFVAVLEKRRQLSFEKNDVVELVKLNETAKQPAAEPQVDADGKPIEEKSVPWGPQRKKRRLHGYKEDPYVFFGENDPDYQAIKEFYQLDESLSQRCLLTRCVTEKKKNIYYCSEPIRDLVLNNENNIKIINTGVKTFVRCENRHTVHPFRLAQEGLQTSNAFMGASRRIQVEREDLVMMLNCTDPTQPPSTHELKKETQERCKELGVGSCILKYVDQRFTLYTVGWRGTSSLRAYVQKDETIHILRLLGADLSKFETNKYEDARVAAAAAADAEVGKSAEAEADSSGDGDATESTFSGSGAIDVTVAAETTGTPMDTEVVATS
What is the function of this protein?
RNA methyltransferase that methylates tRNAs.  Methylates cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA(Leu)(CAA) precursors.  Required for short-term memory.
What are the official names of this protein?
tRNA (cytosine(34)-C(5))-methyltransferase, NOP2/Sun domain family member 2 ortholog.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. TRM4 subfamily.
What are the subcellular locations of this protein?
Nucleus, nucleolus.
Protein: DAPAT_PROM3
Sequence: MVQVNSNYLKLKAGYLFPEIARRIKSFSEANPDAALIRLGIGDVTEPLPLACRNAMKVAIDEMGTNTGFHGYGPEQGYDWLREAIAKHDFQNKGCQINAEEIFVSDGSKCDSSNILDILGSSNRIAVTDPVYPVYVDSNVMAGRTGEANQSGRYAGLSYLPINAENGFAAKIPSEPVDLIYLCFPNNPTGAVATRAQLQEWVNYARTNSVLILFDAAYEAFIQNPDLPHSIYEIEGARECAIEFRSFSKNAGFTGTRCAFTVVPKGLKGKSDDGSDVELWNLWNRRQSTKFNGVSYIIQRGAEAVYSAQGQGEINALVSFYMRNAAIIRRELTAAGIEVHGGEHAPYVWLKTPDDMDSWGFFDHLLHNANVVGTPGSGFGAAGEGYFRLSAFNSRVNVDEAMRRIRAL
What is the function of this protein?
Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis.  Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate.
What are the official names of this protein?
LL-diaminopimelate aminotransferase, DAP-AT, DAP-aminotransferase, LL-DAP-aminotransferase.
What is the protein family that this protein belongs to?
Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.
Protein: KAD_SALSV
Sequence: MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIVVDYVLEFDVPDELIVDRIVGRRVHAASGRVYHVKFNPPKVEGKDDVTGEDLTTRKDDQEETVRKRLVEYHQMTAPLIGYYQKEAEAGNTKYAKVDGTQAVADVRAALEKILG
What is the function of this protein?
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP.  Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
What are the official names of this protein?
Adenylate kinase, AK, ATP-AMP transphosphorylase, ATP:AMP phosphotransferase, Adenylate monophosphate kinase.
What is the protein family that this protein belongs to?
Belongs to the adenylate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MXII_SHISO
Sequence: MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQVSQIMEMVSNPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS
What is the function of this protein?
Necessary for the secretion of IPA invasins.
What are the official names of this protein?
Protein MxiI.
What is the protein family that this protein belongs to?
To S.typhimurium PrgJ.
Protein: RL4_HELMI
Sequence: MPKVALYNTEGAQVGEIELNDAIFGIEPNEAVMHQAVVTQLAAWRRGTHKVKSRGEVSGGGKKPWRQKGTGRARAGTSRSPLWRGGAIIFGPQPRSYKIAMPKKVRRLALKSALSDKVRSGNLIVVDALEMDAPKTKVIAGILNKLKVERKALLVTADIDETVFKSARNIPGVSPVEAVGINVYDILNHDKLVITKNAVAKVEEVFA
What is the function of this protein?
Forms part of the polypeptide exit tunnel.
What are the official names of this protein?
50S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
Protein: TATA_MARN8
Sequence: MGISIWQLLIVLGIVILLFGTKKLRNIGSDLGGAIRGFKKSMSDEEEKNAEQQPLEKQNAEQQAQAEDKPKEKQG
What is the function of this protein?
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.  TatA could form the protein-conducting channel of the Tat system.
What are the official names of this protein?
Sec-independent protein translocase protein TatA.
What is the protein family that this protein belongs to?
Belongs to the TatA/E family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: ALAC_ECOLI
Sequence: MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE
What is the function of this protein?
Involved in the biosynthesis of alanine (PubMed:20729367).  Catalyzes the transamination of pyruvate by glutamate, leading to the formation of L-alanine and 2-oxoglutarate.  Is also able to catalyze the reverse reaction (PubMed:20729367).
What are the official names of this protein?
Glutamate-pyruvate aminotransferase AlaC.
What is the protein family that this protein belongs to?
Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: OBG_ACTSZ
Sequence: MKFIDEALIRIEAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVYLIADENLNTLIDYRFEKRFAAERGENGRSSDCTGKRGKDITLRVPVGTRAIDHDTKEILGDLTKHGSKLLIAKGGYHGLGNTRFKSSVNRAPRQKTMGTPGEKRDLQLELMLLADVGMLGLPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVARVGSDRSFVVADIPGLIENASEGAGLGIRFLKHLERCRVLIHLVDIAPLDESDPADNIAIIENELFQYSEKLADKPRWLVFNKIDTMSDEEATARVEEIVERLGYEDNYFLISAATGKNVSELTHDIMDFLEAHPRETEEDKPADEVKFKWDDYHQQAMESAVDEDDDFWDDWSEEDDEGVETIYERGGN
What is the function of this protein?
An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate.  Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control.
What are the official names of this protein?
GTPase Obg, GTP-binding protein Obg.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AATR2_DICDI
Sequence: MTEKSNIIKDYTYFLSKRGKLKEASPIRSLFQYSSLPGMISLGGGLPNASTFPFKSINIELKDGSKLEIEGSDLEEAFQYSPTPGLPRLQKALKDLQIRQHNLCPPDEAGKEWNLIISNGSQESLANAFEVLIDDNDSIITENPTYSGTLSILKPLSLNICGIETDRYGMIPEKLQRLLSEWDHSKFKFPRVIYLIPCGQNPSGTTMNHQRKLDIYSICSKYNLLIIEDDPYYYLQFESSENADDDDGASCSSLNLGKSLLSMDVDGRVLRFDSLSKILSSGLRIGFVTGNKQLLEKINFHQQSTTLHSSGLSQAVVLSLLNKWGVEKWNQHISFIQRFYLEKRNQMIDSIDKHLKGLVEFNIPSAGMFIWFKLPVEDSKTLIFKNAVEKKILLVPGISFSTDSTKPSQFVRASYSTASKEQIDEAIKRFADLLNEELKK
What is the function of this protein?
Has aromatic amino acid transaminase activity.
What are the official names of this protein?
Aromatic amino acid aminotransferase DDB_G0287711.
What is the protein family that this protein belongs to?
Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEF_WOLPM
Sequence: MSILPIVIAPDERLITRASEVTDINDKIKELVNDMFETMYDAEGLGLAAVQVGVLKRIFVMDIQLETIENEPAGYGSTGKFYMINPEITELSDEQVILKEGCLSIPEQSHEIKRPKYLTVKYKDLDNEEQTLKASGWLARCIQHELDHLNGILYIRHLSKLKYDMAMKKAQKVKKHYEQ
What is the function of this protein?
Removes the formyl group from the N-terminal Met of newly synthesized proteins.  Requires at least a dipeptide for an efficient rate of reaction.  N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
What are the official names of this protein?
Peptide deformylase, PDF, Polypeptide deformylase.
What is the protein family that this protein belongs to?
Belongs to the polypeptide deformylase family.
Protein: RIBBA_PARD8
Sequence: MSEIQLNTIEEAIEDFREGKFLIVVDDEDRENEGDFIIAAEKVTPEKINFMLKNGRGVLCAPITEERCQELELDMQVANNTSLLGTPFTITVDKLGGKCTTGVSMYDRAETILALADPKTKPSDLGRPGHINPLRARSRGVLRRAGHTEAAVDLARLAGLYPAGALIEIINEDGTMARLPQLIEVAKKFDIKIICIKDLIAYRLRTESIVENGVEVDLPTEYGHFRLIPFRQKSNGLEHIALIKGKFEKDEPILVRVHSSCATGDIFGSMRCECGEQLHEAMRRIDQEGKGVIVYLNQEGRGIGLMEKMKAYKLQEDGLDTVDANLHLGHQADERDYGVGAQILRHIGVTKMRLMSNNPVKRVGLEAYGLEVVENVPIEVKPNPYNEFYMKTKKERMGHVLHNIK
What is the function of this protein?
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
What are the official names of this protein?
Riboflavin biosynthesis protein RibBA.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the GTP cyclohydrolase II family.