PharMolix/UniProtQA huggingface dataset:
Protein: CAPS2_SIFVH
Sequence: MARRNRRLSSASVYRYYLKRISMNIGTTGHVNGLSIAGNPEIMRAIARLSEQETYNWVTDYAPSHLAKEVVKQISGKYNIPGAYQGLLMAFAEKVLANYILDYKGEPLVEIHHNFLWELMQRQSGAGLGVTSGFIYTFVRKDGKPVTVDMSKVLTEIEDALFKLVKK
What is the function of this protein?
Self-assembles to form a helical, filamentous nucleocapsid mesuring 1980 nm in length and 24 nm in width.  Together with capsid protein 1, wraps arounds the DNA and maintains it in an A-form.  Capsid proteins probably maintain the DNA in A-form by non-specific desolvation and specific coordination of the DNA phosphate groups by positively charged residues.  This certainly protects the viral DNA under conditions such as the extreme desiccation of its host.
What are the official names of this protein?
Major capsid protein 2, MCP2.
What are the subcellular locations of this protein?
Virion.
Protein: BBSC_THAAR
Sequence: MKSNSNGKVALIVNADDAVGEAVALRLAGSGVQLALAGADAGRLDKLASQLAGKGATVMAVATAAVEAGAIRDSVAQVKARYGRIDVLVHNESALAANLPEISDADVGAALDTGLAAPFHYLRAVVPGMREAGFGRVVNISDLRYLGLANTSSVAAARSGLFGLTRALALESARDGVTVNTVVMGDVDSETTPAAEREKLAGGIPVKRLGTPADIANAVGFLAADSSKYVTGQTLFVCGGKSAYFSMSI
What is the function of this protein?
Involved in an anaerobic toluene degradation pathway (PubMed:34601806).  Catalytically inactive subunit, which is probably required for the structural and/or regulatory integrity of the catalytic subunit BbsD (PubMed:34601806).  This subunit cannot bind NAD(+) or substrate (PubMed:34601806).
What are the official names of this protein?
(2S)-[(R)-hydroxy(phenyl)methyl]succinyl-CoA dehydrogenase subunit BbsC, (S,R)-2-(alpha-hydroxybenzyl)succinyl-CoA dehydrogenase subunit BbsC.
What is the protein family that this protein belongs to?
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Protein: PNP_CLOB8
Sequence: MNNVLTTEIAGRELKVEFGKVGMLSNAATFTSYGDTVILTNVNASEQPREGIDFFPLSVEYEERLYAVGKIPGGFIKREGRPSEKAILNGRAVDRTLRPLFPKGYRNDVQVVTTVVSVEKDNLPEILAINAASLALCLSSIPYTIPAAAVQVGIIDGKFVTNPDTQGREKSILHLTVCATKERVMMIEAGGQEIPEDTMIDAIKYGFDECQKIIAFQEEAVAKFGKKKDEPVLYAVDPELEKDVKEFASDMIKEAMYIMEKDERNAAVDAVYEKVNEAFGEKYADKMGDIKEVLYTMQKKVVRHMLLKDKRRPDGRAFDQIRPLGCEIGILPRTHGTGLFTRGLTQVMTVATLGSISEIQILDGIDEAQSKRYMHHYNFPGYSVGEVKPLRGPGRREIGHGALAERALEPLIPSEEEFPYTIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSEDLSEEAVLTDIQGIEDFFGDMDFKVAGTTEGITSIQVDTKLQGFSFNVVENAIRDARKARLTIIDKINECISTPKEDVSLYAPKTQIMSINPDKIRDVIGAGGKVINKIIQDTGVKIDIKEDGTVFVSSTDHNGVNEAIKIIEGLTKEVKAGEVYLGKVTKITTFGAFVEILPSKEGLVHISKLAKERVNKVEDVVSIGDEILVKVTEIDNQGRINLSRKDALVEQENKEEK
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DNAJ_STAA3
Sequence: MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEEINEQPSNFKDRAKRFFKGE
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.  Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
What are the official names of this protein?
Chaperone protein DnaJ.
What is the protein family that this protein belongs to?
Belongs to the DnaJ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YVFF_VACCC
Sequence: MYNIKKHYSISNLGFQKFFIRKPIIIYIDLLIVGINRLMLKLSSSPRLEIQYLHSFCCFETLSIHVNTNPGRRY
What are the official names of this protein?
Uncharacterized 8.8 kDa protein.
Protein: PCNA_TOBAC
Sequence: MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEEETKP
What is the function of this protein?
This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.
What are the official names of this protein?
Proliferating cell nuclear antigen, PCNA.
What is the protein family that this protein belongs to?
Belongs to the PCNA family.
What are the subcellular locations of this protein?
Nucleus.
Protein: ATPA_CORA7
Sequence: MAELTISSDEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGLPSVMANELLEFPGGVIGVAQNLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGMGPITAEEDRVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCIDTILNQKANWESGDKNKQVRCIYVAIGQKGSTIAGVRHTLEQHGALEYTTIVAAPASDAAGFKWLAPFSGAALGQHWMYQGNHVLIIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLELAAYRDLQAFAAFASDLDPASKAQLERGERLVELLKQSESSPQPVEYQMVSIFLADQGIFDVVPVEDVRRFEKELHDHLNSATPQVFEQIQGGTALTDESKDALVAAAKDFTPSFRTTEGNNLGTEAPVDPLAADDVNKTELNVSRKTAK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: C42S2_HUMAN
Sequence: MSEFWLCFNCCIAEQPQPKRRRRIDRSMIGEPTNFVHTAHVGSGDLFSGMNSVSSIQNQMQSKGGYGGGMPANVQMQLVDTKAG
What is the function of this protein?
Probably involved in the organization of the actin cytoskeleton by acting downstream of CDC42, inducing actin filament assembly.  Alters CDC42-induced cell shape changes.  In activated T-cells, may play a role in CDC42-mediated F-actin accumulation at the immunological synapse.  May play a role in early contractile events in phagocytosis in macrophages.
What are the official names of this protein?
CDC42 small effector protein 2, Small effector of CDC42 protein 2.
What is the protein family that this protein belongs to?
Belongs to the CDC42SE/SPEC family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton. Cell membrane; Lipid- anchor. Cell projection, phagocytic cup. Note=Recruited to the activated TCR prior actin polymerization. Localizes at the phagocytic cup of macrophages.
Protein: SECB_SALAR
Sequence: MSEQNNTEMAFQIQRIYTKDVSFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQAGIFSISGIEGTQMAHCLGAYCPNILFPYARECITSLVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA
What is the function of this protein?
One of the proteins required for the normal export of preproteins out of the cell cytoplasm.  It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state.  It also specifically binds to its receptor SecA.
What are the official names of this protein?
Protein-export protein SecB.
What is the protein family that this protein belongs to?
Belongs to the SecB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYK_BACC0
Sequence: MDNMNHEELNDQLLVRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWTRLHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD
What are the official names of this protein?
Lysine--tRNA ligase, Lysyl-tRNA synthetase, LysRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL36_ROSS1
Sequence: MKVRASVKPRCEYCRVIKRKGVLRVICSRQPKHKQRQG
What are the official names of this protein?
50S ribosomal protein L36.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL36 family.
Protein: MURQ_RUBXD
Sequence: MDERLGELVTERRSPDSAELDRMGTGELVRLMAREEARVPEAVARQAPRMAAAIDAVVERLRAGGRLIYVGAGTAGRVGVLDAVECGPTFGVPPGRVVGVIAGGREAMFDPRESAEDSAEAGASDLDRLCVGPEDAVVGVSASGRTPYTLGAVRRARERGALTVGLSCNPGSRLSDIVDHPLEVVVGPEVLAGSTRLKAGSAQKLVLNMISTISMVRLGKTYGNLMVDVRASNAKLRDRARRIVELATGAPPEEAAAALDRCGGEAKVAIVALLLGVGPDEARRRLAAGSVRAALGEGRRP
What is the function of this protein?
Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate.
What are the official names of this protein?
N-acetylmuramic acid 6-phosphate etherase, MurNAc-6-P etherase, N-acetylmuramic acid 6-phosphate hydrolase, N-acetylmuramic acid 6-phosphate lyase.
What is the protein family that this protein belongs to?
Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
Protein: VAT_CAMVS
Sequence: MSITGQPHVYKKDTIIRLKPLSLNSNNRSYVFSSSKGNIQNIINHLNNLNEIVGRSLLGIWKINSYFGLSKDPSESKSKNPSVFNTAKTIFKSGGVDYSSQLKEIKSLLEAQNTRIKSLEKAIQSLENKIEPEPLTKEEVKELKESINSIKEGLKNIIG
What is the function of this protein?
This protein is involved in virus transmission.
What are the official names of this protein?
Aphid transmission protein, Atf, Protein 2.
What is the protein family that this protein belongs to?
Belongs to the caulimoviridae ORF II family.
Protein: LOLA_YERPG
Sequence: MKRLLVACCFLSGLISASALADASTDLQNRLSKVNSFHASFSQAVTSSDGAVVQEGEGELWVKRPNLFNWHMTSPDESVLISDGETLWFYNPFVEQATATWLKNATGNTPFMLITRNNPDDWKQYNVKQKGDDFELTPKSASGNLKQFAISVTPSGTIKSFTAVEQDGQRSAYTLKSQQSSVVDASKFTFTPPKGVTLDDQR
What is the function of this protein?
Participates in the translocation of lipoproteins from the inner membrane to the outer membrane.  Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
What are the official names of this protein?
Outer-membrane lipoprotein carrier protein.
What is the protein family that this protein belongs to?
Belongs to the LolA family.
What are the subcellular locations of this protein?
Periplasm.
Protein: KCNH7_MOUSE
Sequence: MPVRRGHVAPQNTFLGTIIRKFEGQNKKFIIANARVQNCAIIYCNDGFCEMTGFSRPDVMQKPCTCDFLHGPETKRHDIAQIAQALLGSEERKVEVTYYHKNGSTFICNTHIIPVKNQEGVAMMFIINFEYVTDEENAATPERVNPILPVKTVNRKLFGFKFPGLRVLTYRKQSLPQEDPDVVVIDSSKHSDDSVAMKHFKSPTKESCSPSEADDTKALIQPSQCSPLVNISGPLDHSSPKRQWDRLYPDMLQSSSQLTHSRSRESLCSIRRASSVHDIEGFSVHPKNIFRDRHASEDNGRNVKGPFNHIKSSLLGSTSDSNLNKYSTINKIPQLTLNFSDVKTEKKNTSPPSSDKTIIAPKVKERTHNVTEKVTQVLSLGADVLPEYKLQTPRINKFTILHYSPFKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCSPLNVVDLIVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAIHYFKGWFLIDMVAAIPFDLLIFGSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLMLLMCIFALIAHWLACIWYAIGNVERPYLTDKIGWLDSLGTQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNMVLKGFPECLQADICLHLNQTLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDDIVVAILGKNDIFGEMVHLYAKPGKSNADVRALTYCDLHKIQREDLLEVLDMYPEFSDHFLTNLELTFNLRHESAKSQSVNDSEGDTGKLRRRRLSFESEGEKDFSKENSANDADDSTDTIRRYQSSKKHFEERKSRSSSFISSIDDEQKPLFLGTVDSTPRMVKATRLHGEETMPHSGRIHTEKRSHSCRDITDTHSWEREPARAQPEECSPSGLQRAAWGVSETESDLTYGEVEQRLDLLQEQLNRLESQMTTDIQAILQLLQKQTTVVPPAYSMVTAGAEYQRPILRLLRTSHPRASIKTDRSFSPSSQCPEFLDLEKSKLQSKESLSSGRRLNTASEDNLTSLLKQDSDASSELDPRQRKTYLHPIRHPSLPDSSLSTVGILGLHRHVSDPGLPGK
What is the function of this protein?
Pore-forming (alpha) subunit of voltage-gated potassium channel (By similarity).  Channel properties may be modulated by cAMP and subunit assembly.
What are the official names of this protein?
Potassium voltage-gated channel subfamily H member 7, Ether-a-go-go-related gene potassium channel 3, ERG-3, Eag-related protein 3, Ether-a-go-go-related protein 3, Voltage-gated potassium channel subunit Kv11.3.
What is the protein family that this protein belongs to?
Belongs to the potassium channel family. H (Eag) (TC 1.A.1.20) subfamily. Kv11.3/KCNH7 sub-subfamily.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: NDUA4_BOVIN
Sequence: MLRQIIGQAKRHPSLIPLFIFIGAGGTGAALYVTRLALFNPDVSWDRKNNPEPWNKLGPNDQYKFYSVNVDYSKLKKEGPDF
What is the function of this protein?
Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water.  Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)).  The BNC reduces molecular oxygen to 2 water molecules unsing 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix (By similarity).  NDUFA4 is required for complex IV maintenance (By similarity).
What are the official names of this protein?
Cytochrome c oxidase subunit NDUFA4, Complex I-MLRQ, CI-MLRQ, NADH-ubiquinone oxidoreductase MLRQ subunit.
What is the protein family that this protein belongs to?
Belongs to the complex IV NDUFA4 subunit family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Single-pass membrane protein.
Protein: SYQ_PSEA6
Sequence: MAETESRPTNFIRQIIDKDLQSGLHKQIHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPDKEDIDYVNAIKNDVIWLGFEWHGEARYSSNYFDQLHAYAVELIEKGLAYVDFSNQEQVREMRGTLTTPGTNSPYRDTSIEENIAQFAKMRNGEYKEGECLLRAKIDMSSPFMCMRDPALYRVKFAHHHQTGDKWCIYPMYDFTHCISDAIEGITHSLCTLEFQDNRRLYDWVLENVTIDVVPRQYEFSRLNLEYTVLSKRKLIQLVDEEFVSGWDDPRMPTIAGLRRRGFTAASIREFCKRIGVTKMDNMVEMSMLEAPLRDELNENAPRAMAVLEPVKIVIENYPQDGVELLAAPNHPNRPELGSREVPFAREIYIEAEDFREEANKKFKRLVLGKEVRLRNAYVIKAQRVEKDEQGNVTTIFCEYDGDTLGKDPADGRKVKGVIHWVSAAHAVAAEIRLYDSLFTVPNPAAEDDFVACINPESLTVKQGWVEPSLAKVDIDEANIQAFQFERTGYFCFDKDSTTSKLVFNRTVGLRDTWAKIGD
What are the official names of this protein?
Glutamine--tRNA ligase, Glutaminyl-tRNA synthetase, GlnRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NPLA_XENLA
Sequence: MAFAGKRLKGLIAATFTPMTSNSDINLAAIEQYVDYLVQKQHIRNIFVNGTTGEGMSLSVHERKSLAEEWVKQARGKMNDVIVHVGCLSLSDSKDLAAHAASCGADAISTVCPSFLKPSSLDALVLYLKEVASAAPNLPFYYYHIPRLTGITYQIYELLGKVKKNIPSFRGVKFSDVNLMDFSLCVSEYKEFDCLYGVDEQLLGALAFGAHGAVGSTYNYLGKKNGDMMAAFEEGNLQKARKIQCSLQEFLIFVFDMGWGLAEFKDIMSQVSGIPLGPSRLPLYSSMKFDHHDNIKTKMLKLDLI
What is the function of this protein?
Catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) to form pyruvate and N-acetylmannosamine via a Schiff base intermediate.  It prevents sialic acids from being recycled and returning to the cell surface.  Involved in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway (By similarity).
What are the official names of this protein?
N-acetylneuraminate lyase A, NALase A, N-acetylneuraminate pyruvate-lyase A, N-acetylneuraminic acid aldolase A, Sialate lyase A, Sialate-pyruvate lyase A, Sialic acid aldolase A, Sialic acid lyase A.
What is the protein family that this protein belongs to?
Belongs to the DapA family. NanA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DAPF_PARXL
Sequence: MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRYRIFNCDGGEVEHCGNGARCFVKFVRERGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGTPVFDPERVPFATKGLEGRREGADTLWPLDVSGTTRWISVVSMGNPHAVQVVGDVEAFPVLAEGPVIERHARFPQRVNAGFMQIVGRNEIRLRVYERGAGETLACGTGACAAVAAGIRRGLLDSPVRVHTHGGDLTISWDSTREGEPLLMAGPAVTVFEGEIELPD
What is the function of this protein?
Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan.
What are the official names of this protein?
Diaminopimelate epimerase, DAP epimerase, PLP-independent amino acid racemase.
What is the protein family that this protein belongs to?
Belongs to the diaminopimelate epimerase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MSRB_YERPB
Sequence: MAKELNPTENIEKLSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDGPQPTGERYCINSASLNFVDDQNGEQTAG
What are the official names of this protein?
Peptide methionine sulfoxide reductase MsrB, Peptide-methionine (R)-S-oxide reductase.
What is the protein family that this protein belongs to?
Belongs to the MsrB Met sulfoxide reductase family.
Protein: Y242_STRR6
Sequence: MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKTGTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQYQNATIWGKLITNFAGPMNNFILGVVVFWVLIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQAVETETKDKTAPTLDVTISEKGSDKQVTVTPEDSQGRYLLGVQPGVKSDFLSMFVGGFTTAADSALRILSALKNLIFQPDLNKLGGPVAIFKASSDAAKNGIENILYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVIMVVLMIAVTWNDIMRLFFR
What are the official names of this protein?
Putative zinc metalloprotease spr0242.
What is the protein family that this protein belongs to?
Belongs to the peptidase M50B family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: SYTC_MOUSE
Sequence: MSQEKASSPSGKMDGEKPVDASEEKRKEGGKKKSKDGGGDGGRAELNPWPEYINTRLDMYNKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADTDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVEETVRRLQQLKQTRSKQAEEEF
What is the function of this protein?
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction: threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).  Also edits incorrectly charged tRNA(Thr) via its editing domain, at the post-transfer stage.
What are the official names of this protein?
Threonine--tRNA ligase 1, cytoplasmic, Threonine--tRNA ligase, cytoplasmic, Threonyl-tRNA synthetase, ThrRS, Threonyl-tRNA synthetase 1.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MACB_BDEBA
Sequence: MIDIKGIRKSYQMGDTKVDVLKGISLKIERGDFVAIMGPSGSGKSTLMHILGLLDVPSEGSYNLNGREVADLSEDELAIVRREEIGFIFQQFNLLPRMEAWQNVSLPLIYSEDGFSYDKAQALLDKVGLAERIHHKSNELSGGQQQRIAIARSLINNPRIIFADEPTGNLDSKSEKEIIQILHKLNDQGITVIVVTHEEEIGQQAKRLIRLRDGVIQSDERLQALPAAPTTAQEKRQEKTAKWPVREMIEHLHQGFQTLAANKVRSGLSMLGILIGVAAVVGMLALGTGARQSIEKQLSSLGSNLLVLRAGNVRVGGVMQESGVRIRISLDDVSTIKNQISGIKDVSPSSSGRGQITYLNKNWNTQVMGVAPAYEQMRASTPIFGRFFSEEENQRRTLVAVIGTTVARELFGEKSPIGEMIKINKVNFRVIGVLPEKGAAGPQDQDDRILVPVVTAMYRLFGRNYVDSVDIEVRDAADIPEVQDSLQELMNKRHRVPVSSQGDAFNVFNMADIQQALNSTSQTLSMLLASIAAISLVVGGIGIMNIMLVSVTERTKEIGLRKAIGARRRDILLQFLAESIVVSVCGGLLGIALGVGFSLLISKVLGWSTVVSAGSVILSFGFSALIGIVFGSYPASKASKLHPIEALRYE
What is the function of this protein?
Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation.  Confers resistance against macrolides.
What are the official names of this protein?
Macrolide export ATP-binding/permease protein MacB.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: PABP1_ARATH
Sequence: MTLEPDIYLKKIIREQRRVSTIRTSENKFEKHTLYIGDLDSSVEEGDLYTKFSEFTHDISSVKVCCDRNTGLSLGYGYVNFNHSSQAKTAMEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQFNNPPPSPHQQPIFSQVVAPATMLSQQTPLRGYNFQPYSMCGSRMPNSCPPISIPNFMVPQPFRPTLYPPAPLVGLYGSLPQPLLQPNLWNPYRRF
What is the function of this protein?
Binds the poly(A) tail of mRNA.  Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation (By similarity).
What are the official names of this protein?
Polyadenylate-binding protein 1, PABP-1, Poly(A)-binding protein 1.
What is the protein family that this protein belongs to?
Belongs to the polyadenylate-binding protein type-1 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: TX709_LYCSI
Sequence: MKLIIFTGLALLLIVSLIDVEAQNEGACIPHGSVCTTNHAGCCSKLSCDCYRRFEKGVEKGQKCWCIETGVTFSKE
What are the official names of this protein?
U7-lycotoxin-Ls1c, Toxin-like structure LSTX-G9.
What is the protein family that this protein belongs to?
Belongs to the neurotoxin 19 (CSTX) family. 07 (U7-Lctx) subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: ARGB_PROMH
Sequence: MEPLIIKLGGVLLDNEKALTRFFTALQEYRTSHSRPLVIVHGGGCLVDSLMKKLQLPVVKKQGLRVTPADQIDIITGALAGSANKTLLSWATRFGLNGVGLCLGDGQLAKVTKISDELGHVGNAEPGSPELLNLLLNAGYLPIISSIGVSIQGELMNVNADQAATAIAETLGADLVLLSDVSGILDGKGQKLTEISATKAQALIDQGIITDGMIVKVNAALEAARTLRRPVEIASWRHAEKLTDLFNGMVIGTRILA
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of N-acetyl-L-glutamate.
What are the official names of this protein?
Acetylglutamate kinase, N-acetyl-L-glutamate 5-phosphotransferase, NAG kinase, NAGK.
What is the protein family that this protein belongs to?
Belongs to the acetylglutamate kinase family. ArgB subfamily.
What are the subcellular locations of this protein?
Cytoplasm.