PharMolix/UniProtQA huggingface dataset:
Protein: RNA14_ASHGO
Sequence: MSGNETPDAGTVKSVSPSSGGSSLPARPTLRERDPNDIENRLRDQIEEDPTQILLYIELIKYYVGKQQVAEIREVFGQLHELFPLESFLWTIHLNWELEQEESGQVETLLAKCLSGELMNNDIYLWSTYLGYVRRKNNTVTGGEEARGTVLKAYELVMEKCAVFEPRSMQFWQDYLQFLEQWKPVSKWEEQSRVEILRKLYKRLLCLPVESLERYWEKYTQWEQEVNQLTARKFIGELSASYMNARSLYQEWSNLTKGLRRSLPTKLNQATQQNLPAPGQYDEYQLQIWTKWIQWELDNKLDLPEVVLRQRVEYVHRQAVQHMCFAPEIWYNYAMFVDENEHEKVLEIAVRCNPGSLSLTFKLAEYLELNNKIEALEERFQHCIARISMELQVMNDTTMDPDKILRQTRKLTFAYCVYMTTMKRVTGLSAARKVFSKCRKLKKDISYEIYVENAYMEYYNNSDVTTPCRVLEFGLKYFQDNGNYINKYLDFLILVKQDAQIKSLFESCIDKIYNLDQLKEIYKKVINYESKFGNLNNVYELERRFFEKFPEAEKIEVFTDRYQLQGENLLKRLEFPYLMDEYGIPVLSGYAVKRSLHSAGIVFDDNGSSKRQRQEQTEAVPMEIIELLKVLPKRQYFKTIVLDPHKLADFLSDKVTIPPCD
What is the function of this protein?
Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation.
What are the official names of this protein?
mRNA 3'-end-processing protein RNA14.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm. Note=Nucleus and/or cytoplasm.
Protein: NDHH_ATRBE
Sequence: MTTPTTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGIAEYQKLITRNPIFLERVEGVGIIGGDEALNWGLSGPMLRASGIEWDLRKVDHYESYDEFDWQVQWQREGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYENLEIRRFDRLKDPEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFLIGDQSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit H, chloroplastic, NAD(P)H dehydrogenase subunit H, NADH-plastoquinone oxidoreductase 49 kDa subunit, NADH-plastoquinone oxidoreductase subunit H.
What is the protein family that this protein belongs to?
Belongs to the complex I 49 kDa subunit family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side.
Protein: PBL23_ARATH
Sequence: MKINCLFCCMSHRRFNRRSSSRQSIKDCIDAKNNITTFDNISFKTDSSRRRYISEEIAKLGKGNISAHIFTFRELCVATKNFNPDNQLGEGGFGRVYKGQIETPEQVVAVKQLDRNGYQGNREFLVEVMMLSLLHHQNLVNLVGYCADGDQRILVYEYMQNGSLEDHLLELARNKKKPLDWDTRMKVAAGAARGLEYLHETADPPVIYRDFKASNILLDEEFNPKLSDFGLAKVGPTGGETHVSTRVMGTYGYCAPEYALTGQLTVKSDVYSFGVVFLEMITGRRVIDTTKPTEEQNLVTWASPLFKDRRKFTLMADPLLEGKYPIKGLYQALAVAAMCLQEEAATRPMMSDVVTALEYLAVTKTEEDGQTVEGEEEEEEDERSKL
What is the function of this protein?
May be involved in plant defense signaling.
What are the official names of this protein?
Probable serine/threonine-protein kinase PBL23, PBS1-like protein 23.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor.
Protein: DNAJ1_STRAW
Sequence: MSTKDFIEKDYYKVLGVPKDATEAEIKKAYRKLAREFHPDANKGNAKAEERFKEISEANDILGDTKKRKEYDEARTLFGNGGFRPGPGAQGGSFNFDLGDLFGGGAQQGGGAGGGFGGGIGDVFGGLFNRGGAGPGTGTRTQPRRGQDIESEVTLSFTEAVDGATVPLRMSSQAPCKACSGTGDANGTPRVCPTCVGTGQVARGSGGGFSLTDPCPDCKGRGLIAENPCEICKGSGRAKSSRTMQVRIPAGVSDSQRIRLRGKGAPGERGGPAGDLYVVVHVDAHPVFGRKGDNLTVTVPVTFAEAALGGEVKVPTLGGPAVTLKLPPGTPNGRTMRARGKGAVRKDGTRGDLLVTVEVTVPKDVSGKARDALEAYREATAGEDPRAELFQAAKGA
What is the function of this protein?
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion.  Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex.  GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle.  Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.  Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
What are the official names of this protein?
Chaperone protein DnaJ 1.
What is the protein family that this protein belongs to?
Belongs to the DnaJ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LEXA_ECOSE
Sequence: MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
What is the function of this protein?
Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA.  Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'.  In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
What are the official names of this protein?
LexA repressor.
What is the protein family that this protein belongs to?
Belongs to the peptidase S24 family.
Protein: DHSD_PONAB
Sequence: MAVLWRLSAVCGAQGGRALLLRTPVVRPAHISAFLQDRPIPEWCGVQHIHLSPGHHSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAATLTLHGHWGLGQVVTDYVHGDASQKAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWKL
What is the function of this protein?
Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
What are the official names of this protein?
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, CybS, CII-4, QPs3, Succinate dehydrogenase complex subunit D, Succinate-ubiquinone oxidoreductase cytochrome b small subunit, Succinate-ubiquinone reductase membrane anchor subunit.
What is the protein family that this protein belongs to?
Belongs to the CybS family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: AMPA_NOCFA
Sequence: MTAVADRSLGPELARTETLGPDTDVLVIGLTSSENGPSIAPDDMFGDVLTEDVRAELLDQLGAVGAKGKAEELTRVPAPAALEGVTSVLAVGLGAPDKLDAEQLRRSAGVAARSLTGTEVVATTLGGIDIAAAAEGFYLGAYTFTPFRSAKSAPKPDERPVAKVEFLVPTADFGEEALFRAQLVAEAVATARDFVNTPPSHLYPAEFAARTQVLAEAAGLDVEVLDENALEAGGYGGVLGVGKGSSRPPRLVRLTYAGGPKKVALIGKGVTFDTGGISIKPAQNMENMTSDMAGAAAVIATTLLAARLSLPITVTATVPMAENMPSATAQRPGDVLTQYGGTTVEVLNTDAEGRLILADAIVRAGEDSPEFLIDVATLTGAQMVALGTRTPGVMGTDEFRDRVARISQEVGENGWPMPLPAELRADLNSKIADLANVAPHRWGGMLSAGLFLREFVPEGVQWAHLDVAGPAYNTGGPFGYIGKGGTGVPVRTLIAVLEDIAAE
What is the function of this protein?
Presumably involved in the processing and regular turnover of intracellular proteins.  Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.
What are the official names of this protein?
Probable cytosol aminopeptidase, Leucine aminopeptidase, LAP, Leucyl aminopeptidase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M17 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RECA_BURCJ
Sequence: MTAEKSKALAAALAQIEKQFGKGSIMRMGDGEAAEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVIAELQKLGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALEITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNAREFLRENPEIAREIENRIRESLGVVAMPDGAGNEAEAMDEEE
What is the function of this protein?
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.  It interacts with LexA causing its activation and leading to its autocatalytic cleavage.
What are the official names of this protein?
Protein RecA, Recombinase A.
What is the protein family that this protein belongs to?
Belongs to the RecA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GPDHC_ARATH
Sequence: MVGSIEAKSLQSNGSVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAALLQESYGGFRDKFQIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARLGDRTLYADEILKDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPIIISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGAAKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGKGMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILITREQSTQAILQALRDETLNDPRDRIEIAQSHAFYRPSLLGQP
What is the function of this protein?
Involved in cell redox homeostasis.  Required for maintaining a steady state cellular NADH/NAD(+) ratio through a mitochondrial glycerol-3-phosphate redox shuttle.  May function with the mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase SDP6 to shuttle reducing equivalents into the mitochondria for respiration.
What are the official names of this protein?
Glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic.
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol.
Protein: SURE_PROM1
Sequence: MKPLKILISNDDGVFAEGIRTLATSAASRGHKVTVVCPDQERSATGHGLTLHSPIRAEKADELFGGGIKAWGCTGTPADCVKLALNELLDQKPDLILSGINHGPNLGTDIFCSGTVAAALEGTLDGIPSIAVSVASFQWKNFSFAGKLSLDIAEKAIQQNWPKNLLLNLNIPPCEEKEMGDLVWTRLSIRQYEEQFIRRVDPRGNTYFWMAGEAVTDLQSAGEGPKGWPSDVSQIAICSPSLTPIQPDLFWRGNLDDLPNLI
What is the function of this protein?
Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.
What are the official names of this protein?
5'-nucleotidase SurE, Nucleoside 5'-monophosphate phosphohydrolase.
What is the protein family that this protein belongs to?
Belongs to the SurE nucleotidase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CP100_HUMAN
Sequence: MSEIPSTIVSKNMTNDKNSLESMNISSSSSTEENPKKQARKNEEHGPDPSANPFHLSGDVDFFLLRDQERNKALSERQQQKTMRVHQKMTYSSKVSAKHTSLRRQLQLEDKQEDLEARAEAEHQRAFRDYTTWKLTLTKEKNVEPENMSGYIKQKRQMFLLQYALDVKRREIQRLETLATKEEARLERAEKSLEKDAALFDEFVRENDCSSVQAMRAAEKETKAKIEKILEIRDLTTQIVNIKSEISRFEDTLKHYKVYKDFLYKLSPKEWLEEQEKKHSFLKKAKEVSEASKESSVNSTPGDKGPGIKGKASSMWAKEGQGTKKPWRFLQTMRLGRSPSYLSSPQQGSQPSESSGGDSRGSNSPIPPTQEDTDSDGEEPQLYFTEPQQLLDVFRELEEQNLSLIQNSQETEKTLEELSHTLKHTQIRMDREVNQLKQWVTTMMMSITKEEDTAAELELKARVFHFGEYKGDQQDKLLESLNCKVLDVYRHCTGTQQEANLGTVQMLTIIEHQLDELLENLEHVPQVKIEQAERAKEKERRIRLREEKLQMQKILQEEHLQRARARAQAEIKKKRGRTLVCRSRPPAHRIKQQSEHTLMDKEEEELLFFFT
What is the function of this protein?
May play a role in ciliary/flagellar motility by regulating the assembly and the activity of axonemal inner dynein arm.
What are the official names of this protein?
Cilia- and flagella-associated protein 100, Coiled-coil domain-containing protein 37.
What is the protein family that this protein belongs to?
Belongs to the CFAP100 family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton, cilium axoneme.
Protein: GELE_ENTFA
Sequence: MMKGNKILYILGTGIFVGSSCLFSSLFVAAEEQVYSESEVSTVLSKLEKEAISEAAAEQYTVVDRKEDAWGMKHLKLEKQTEGVTVDSDNVIIHLDRNGAVTSVTGNPVDQVVKIQSVDAIGEEGVKKIIASDNPETKDLVFLAIDKRVNNEGQLFYKVRVTSSPTGDPVSLVYKVNATDGTIMEKQDLTEHVGSEVTLKNSFQVAFNVPVEKSNTGIALHGTDNTGVYHAVVDGKNNYSIIQAPSLVALNQNAVDAYTHGKFVKTYYEDHFQRHSIDDRGMPILSVVDEQHPDAYDNAFWDGKAMRYGETSTPTGKTYASSLDVVGHEMTHGVTEHTAGLEYLGQSGALNESYSDLMGYIISGASNPEIGADTQSVDRKTGIRNLQTPSKHGQPETMAQYDDRARYKGTPYYDQGGVHYNSGIINRIGYTIIQNLGIEKAQTIFYSSLVNYLTPKAQFSDARDAMLAAAKVQYGDEAASVVSAAFNSAGIGAKEDIQVNQPSESVLVNE
What is the function of this protein?
Metalloprotease capable of the hydrolysis of insoluble hydrophobic substrates.  Hydrolyzes azocoll and gelatin and, at a lower rate, soluble and insoluble collagens.  Does not cleave short synthetic peptides.  Preferentially hydrolyzes the 24-Phe-|-Phe-25 bond in the insulin B-chain, followed by the 5-His-|-Leu-6 bond.  Inactivates endothelin-1, primarily by cleavage of the 5-Ser-|-Leu-6 and 16-His-|-Leu-17 bonds.  Hydrolyzes the alpha chain of C3 to generate a C3b-like protein.  Inhibits complement-mediated hemolysis and opsinization of bacteria.  Hydrolyzes the insect antimicrobial peptide cecropin.  Decreases the length of E. faecalis chains via the activation of autolysin.  Degrades polymerized fibrin.
What are the official names of this protein?
Gelatinase, Coccolysin.
What is the protein family that this protein belongs to?
Belongs to the peptidase M4 family.
What are the subcellular locations of this protein?
Secreted.
Protein: Y1300_POLSJ
Sequence: MVLITGMSGSGKSVALHALEDAGYYCVDNLPPELLTPFVALEHQHGPRKVAIAMDVRSATSLPLVPQQLRQLQAQGVTVQSLFLDANTETLVRRFSETRRLHPLSRGDTADQHRALVDAIELERELLGDMREQSHVLDTSMIRASQLQAYVKSLIAAPAPQLTLVFESFAFKRGVPLDADYVFDVRMLPNPHYEPDLRHLTGCDLAVADYLKAHAEVNDMFRDIEKFLDHWLQALVRDHRSYVTVAIGCTGGQHRSVYLVEKLAESFGRQWPTLKRHRELDAG
What is the function of this protein?
Displays ATPase and GTPase activities.
What are the official names of this protein?
Nucleotide-binding protein Bpro_1300.
What is the protein family that this protein belongs to?
Belongs to the RapZ-like family.
Protein: DYR1A_RABIT
Sequence: QPSISDQQVSALPYSDQIQQPLTNQVMPDIVMLQRRWMDRYEIDSLIGKVEQEWVAIKAFLNQAQIEVRHDTEMKYYIVHLKIVDFGSSCQLGQRIVEVLGIPPAHILDQAPKFFEKLPDGTWSLKKLHNILGVETGGPGGRFKDLILRMLDYDPKIQPYYALQHSFFKQETGIAGHPTYQFSANTGPAHYMTEGHLAMR
What is the function of this protein?
Dual-specificity kinase which possesses both serine/threonine and tyrosine kinase activities (PubMed:11311120).  Exhibits a substrate preference for proline at position P+1 and arginine at position P-3.  Plays an important role in double-strand breaks (DSBs) repair following DNA damage.  Mechanistically, phosphorylates RNF169 and increases its ability to block accumulation of TP53BP1 at the DSB sites thereby promoting homologous recombination repair (HRR).  Also acts as a positive regulator of transcription by acting as a CTD kinase that mediates phosphorylation of the CTD (C-terminal domain) of the large subunit of RNA polymerase II (RNAP II) POLR2A.  May play a role in a signaling pathway regulating nuclear functions of cell proliferation (By similarity).  Modulates alternative splicing by phosphorylating the splice factor SRSF6 (By similarity).  Has pro-survival function and negatively regulates the apoptotic process.  Promotes cell survival upon genotoxic stress through phosphorylation of SIRT1.  This in turn inhibits p53/TP53 activity and apoptosis.  Phosphorylates SEPTIN4, SEPTIN5 and SF3B1 at 'Thr-434' (By similarity).
What are the official names of this protein?
Dual specificity tyrosine-phosphorylation-regulated kinase 1A, Dual specificity YAK1-related kinase, Protein kinase minibrain homolog, MNBH, RP86.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MNB/DYRK subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: HELQ_DROME
Sequence: MANKHNLCKKRSLDLSEESTSESHAKRQCTENLFWPEGEDDDSFFSNAHLEDLLDGRKEELFGTQATTSTNKMTQSGSDDGLGLFADTSFPSAQSVPPNSASKPDEASAPTDKHQIDLADEENADKLFKKINLNDLSIAEMEDIFHGADDFSDPMVQNTQLFLDAMTFKKPKTPEKLLAPLKDDSMSFISKSVIEGLVQGTQYVTCEELKNQSLLDPVNWETQAFADFEKNNQDIDKFPSKGEFYGLPDKVKKMILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLFILPYVSIVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLNADVYTRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLSRIVPKHKFFEHRRSEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKSLEVAVNEIVLRILREMFKNKVLQLAEPQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQSTPFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQLILTNYLHLLYLVVCFNSNERGDELFPADASILFGVYTSLPLDSQAMFKQLGFTEAHAARLFKTQSVQGPLSLQLNRLYKVLILADILNLLPIPSVASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILHKMDRCGTFELEPLMELPAVKINRARQLYAAGFQTIGDIARVRPSHLVQSLEHMPLRVATEIVSAAKIILMKKLDHLEEETENLKDCLKTSDKN
What is the function of this protein?
Single-stranded 3'-5' DNA helicase that plays a key role in homology-driven double-strand break (DSB) repair (PubMed:16888338).  Involved in different DSB repair mechanisms that are guided by annealing of extensive stretches of complementary bases at break ends, such as microhomology-mediated end-joining (MMEJ), single-strand annealing (SSA) or synthesis-dependent strand annealing (SDSA) (By similarity).
What are the official names of this protein?
Helicase POLQ-like, Mutagen-sensitive protein 301, Protein spindle-C, Spindle-C.
What is the protein family that this protein belongs to?
Belongs to the helicase family. SKI2 subfamily.
What are the subcellular locations of this protein?
Nucleus. Chromosome. Note=Localizes to sites of DNA damage.
Protein: DEOC_COPPD
Sequence: MEYNRLIDHTLLKADATVEQIEKLCKEALQYNFFSVCVNSAFVPLAKSFLEGSDVKVATTIGFPLGASATAVKAFEVEQALKEGADEFDMVINVGWLKSKLYRLVHEDIAEVVKAAGGKVVKVIIETCYLTDDEKKIASSIAAAAGAHYVKTSTGFGTGGATVEDVQLIRSVVGPNIGVKASGGIRDAATLKAMVDAGANRIGASASVKIMEELRIEGN
What is the function of this protein?
Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.
What are the official names of this protein?
Deoxyribose-phosphate aldolase, DERA, 2-deoxy-D-ribose 5-phosphate aldolase, Phosphodeoxyriboaldolase, Deoxyriboaldolase.
What is the protein family that this protein belongs to?
Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS19_ANADE
Sequence: MARSIKKGPFADKHLTKKVEDANKGNKKSVIKTWSRRSTILPDFVGHTFAVHNGRKFVPVFVTENMVGHKLGEFAPTRTFHGHSAEKKAAAAPGPAKK
What is the function of this protein?
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S19.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
Protein: DER_PELPB
Sequence: MKPLIALVGRPNVGKSTLFNRILRQRSAIVDPTPGVTRDRHIAEGEWQGKQFLLMDTGGYNADGDTISMAMLEQTLMAIRDADIVIFLTDVRAGLSYEDLELGRLLQRTFQHKQLFFVVNKVETPQLSLDAESFIKTGFTAPYFISARDGSGVADMLDDILESLPETEKQLQEKESAIQLAVVGRPNVGKSSFVNSLLGSNRLIVSNIPGTTRDAIDSRFIRKQQEFILIDTAGLRKRTKIDAGIEYYSSLRTEKAIERCDVALVMLDAAPGIEKQDMKIINMAVERKKGALLLINKWDLIEKDSKTSKIYEETLRSNMGNLSYVPVLFISALTKKNLYRAIDTAQQISQNRSRKISTSVLNKFLEEALSHTHPSTKSGKELKIKYMTQINAAWPVFAFFCNDPLLVQANFRKFLENKLREHFSLEGVPISMRFMQK
What is the function of this protein?
GTPase that plays an essential role in the late steps of ribosome biogenesis.
What are the official names of this protein?
GTPase Der, GTP-binding protein EngA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
Protein: MU106_SCHPO
Sequence: MSIKVEWIKFTRLKKCATLLVQLSLLRYRYMVLAYNHKFDCIVVTIYCGCLFWFSNGALFTEGKARDRGRWAKATMKKNYGVKLKIFLFTILLAFETNTFTPYTSTFSHFARGCL
What is the function of this protein?
Has a role in meiosis.
What are the official names of this protein?
Meiotically up-regulated gene 106 protein.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: MYG_ZIPCA
Sequence: MGLSEAEWQLVLHVWAKVEADLSGHGQEILIRLFKGHPETLEKFDKFKHLKSEAEMKASEDLKKHGHTVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSRHPSDFGADAQAAMTKALELFRKDIAAKYKELGFHG
What is the function of this protein?
Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
What are the official names of this protein?
Myoglobin.
What is the protein family that this protein belongs to?
Belongs to the globin family.
Protein: MURE_HAEIG
Sequence: MKKLTALFNLPELKNDIELHNMVLDSRKVKAGDLFVAIKGHQVDGNQFIDSALHSGASAVVSETELSSEHLTVEFIGNVPVVKYHQLARHLSSLADVFYDSPSKNLTLVGVTGTNGKTTISQLLAQWAELLGHRAAVMGTIGNGLFRQIVEAKNTTGSAVEIQSSLSTFKHAGADFTSIEVSSHGLAQHRVEALHFKAAIFTNLTRDHLDYHQSMENYAAAKKRLFTELDTQIKVINADDEIGYQWLTELPDAIAVSMNADFKVGSHQWMKAINIHYHFKGADITFESSWGNGVLHSPLIGAFNVSNLLLVMTTLLSFGYPLENLLATAKSLKGVCGRMEMIQYPNKPTVIVDYAHTPDALEKALIAAREHCQGELWCIFGCGGDRDRGKRPLMAQIAEQFAEKIIVTKDNPRTEPQSQIEADIVAGFKNMEKVGIIPDRAQAIQFAIESAVENDVILIAGKGHEHYQIIGSEVVHFSDQEIALDFLK
What is the function of this protein?
Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
What are the official names of this protein?
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase, Meso-A2pm-adding enzyme, Meso-diaminopimelate-adding enzyme, UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase, UDP-MurNAc-tripeptide synthetase, UDP-N-acetylmuramyl-tripeptide synthetase.
What is the protein family that this protein belongs to?
Belongs to the MurCDEF family. MurE subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RLMN_ECO45
Sequence: MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV
What is the function of this protein?
Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.  m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity.
What are the official names of this protein?
Dual-specificity RNA methyltransferase RlmN, 23S rRNA (adenine(2503)-C(2))-methyltransferase, 23S rRNA m2A2503 methyltransferase, Ribosomal RNA large subunit methyltransferase N, tRNA (adenine(37)-C(2))-methyltransferase, tRNA m2A37 methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily. RlmN family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NODS_SINFN
Sequence: MCKSLCRSVHGVSEANLTQVNNYHLLHRELAAEDPWRLDANAFEQERHSQMLRLSLSQGPITNALEVGCAAGAFTEKLAPYCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSMLAPSGHMVFGSAIDANCRRWGHVAGAETVIAMLNETLIEVERLYCRGASVNEDCLLSRFQKSTT
What is the function of this protein?
SAM-utilizing methyltransferase involved in nod factor synthesis.
What are the official names of this protein?
Nodulation protein S.
What is the protein family that this protein belongs to?
Belongs to the NodS family.
Protein: UBIG_RALSO
Sequence: MTTTYANADPGELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSTAPLAGKRVVDVGCGGGILSESMARAGANVKGIDLSRKALRVADLHSLEAGVAVDYEEIAAEALAAREPGSFDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLPRGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPLTGRYALTHDTSVNYLIATRRPDAP
What is the function of this protein?
O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.
What are the official names of this protein?
Ubiquinone biosynthesis O-methyltransferase, 2-polyprenyl-6-hydroxyphenol methylase, 3-demethylubiquinone 3-O-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. UbiG/COQ3 family.