PharMolix/UniProtQA huggingface dataset:
Protein: ACKA_ACHLI
Sequence: MKILSVNAGSSSLKFQLLQMPEEFEIASGLVERIGNKNAEFKIKFNGSSKTQSDLVVLDHSVAVDLVIKGLLENKVIASLDEIQGVGHRVVQGGQLFKESVVIDDDVVIKIASLNDLAPLHNPANIIGINAFRKAISNVIHVAVFDTTFHQTMPEENFLYGTPYEWYTKHGVRKYGFHGTSHQYVSELAHARLGKDHSRIIVAHIGNGASITAVRDGKSIDTSMGLTPLEGFPTGTRSGNVDPAIFQLMQQKEGYSLEKTLNELNKNSGYLGISGVSHDSRDIIAAAEGGNKRAQLALDIQAKRIVDYIASYYVLLGGLDALVFTAGIGENAKEVRKLICDRLGVLGIKLDDNKNNSRGDKEISSDASNVKIWVIPTNEEVMIARDVLRLQNK
What is the function of this protein?
Catalyzes the formation of acetyl phosphate from acetate and ATP.  Can also catalyze the reverse reaction.
What are the official names of this protein?
Acetate kinase, Acetokinase.
What is the protein family that this protein belongs to?
Belongs to the acetokinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS9_RICB8
Sequence: MTTLKIKTDKVEKPLNKEALIADKQTVKTPKEKMDNSGRFYATGKRKNAIARVWLKPGKGQVIVNKKSLDQYFASETQVKTILQPFTLTKTNNQYDIVCTVRGGGISGQKGAILHGISKALAQSAPDFHAVLRKGGFLTRDSRVVERKKYGQHKARKKTQFSKR
What are the official names of this protein?
30S ribosomal protein S9.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS9 family.
Protein: SYFB_FUSNN
Sequence: MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSDRLTLLKVNVGGEEPLQIICGAKNHKLNDKVVVAKIGAVLPGNFKIKKSKIRDVESYGMLCSEAELGFTKESEGIIILPEDAPIGTEYREYMNLNDVIFELEITPNRPDCLSHIGIAREVAAYYNRKVKYPMIEITETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPDWLKSRIRAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKKNEEITTLDGVDRVLKNGELVIADDEKAIAIAGVIGGQNTQIDNETKNIFVEVAYFTPENIRKTSRELGIFTDSAYRNERGMDVENLSNVMARAVSLIAEVAGGDVLSEVIDKYVEKPQRAEISLNLEKLNKFIGKNLTYDEVGKILTHLDIELKPLGEGTMLLIPPSYRADLTRPADIYEEVIRMYGFDNIEAKIPVMSIESGEENINFKMPRIVRGILKELGLNEVINYSFIPKFTKELFNFGDEVIEIKNPLSEDMAIMRPTLLYSLITNIRDNINRNQTDLKLFEISKTFKNLGAEKDGLAIEDLKVGIILSGREDKNLWNQSKTDYNFYDLKGYLEFLLERLNVTKYSLTRLENSNFHPGASAEIKIGEDIIGVFGELHPNLVNYFGIKREKLFFAELNLTKLLKYIKIKVNYESISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMSIILRDKNRTLTDGDIDTAMNTILELIKDKYNGEIRK
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLK_SALAR
Sequence: MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVVRVYLDEHSVSVEDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGGEPVDGKPIAVYGAGTGLGVAHLVHVDKRWISLPGEGGHVDFAPNSEEEAMILEILRAEIGHVSAERVLSGPGLVNLYRAIVKSDNRLPENLRPKDITARALADSCIDCRRALSLFCVIMGRFGGDLALTLGTFGGVYIAGGIVPRFLEFFKASGFRGGFEDKGRFKDYVHSIPVYLIVHDNPGLLGSGAHLRQTLGHIL
What are the official names of this protein?
Glucokinase, Glucose kinase.
What is the protein family that this protein belongs to?
Belongs to the bacterial glucokinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEF_SYNSC
Sequence: MAGSFAELARQADKSRDTMLVPKTALETPPLEIHTLGDEVLRQPARRIGKVNEQVRELARDMLRSMYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEITAASAGLDTYEEGCLSIPGVYLDVVRPTAIELSFRDEMGRPRKMKADGLMARCIQHEMDHLNGVLFVDRVTDQDGLQKELKEKGFERQDVRSVA
What is the function of this protein?
Removes the formyl group from the N-terminal Met of newly synthesized proteins.  Requires at least a dipeptide for an efficient rate of reaction.  N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
What are the official names of this protein?
Peptide deformylase, PDF, Polypeptide deformylase.
What is the protein family that this protein belongs to?
Belongs to the polypeptide deformylase family.
Protein: TRPC_BRUC2
Sequence: MSTDILRKIEAYKREEIAAAKARLALDELKARTRDQSAPRGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLTGAEKL
What are the official names of this protein?
Indole-3-glycerol phosphate synthase, IGPS.
What is the protein family that this protein belongs to?
Belongs to the TrpC family.
Protein: SYR_RICBR
Sequence: MNIFNKLKHDIITASTQLYNNSEIANHASIETPKDSFNGDLSSNIAMIIAAKKNVPPREVALKFKEILNELPYIASIEIAGPGFINFTIKADSWHTAIKDILQNESKFFEIDVDKNKNINIEYVSANPTGPMHIGHARGAVYGDVLANILKKVGYPVTKEYYVNDAGSQINDLVSTVILRYREALGEKITITEGLYPGEYLIPVGQALAKEYGDKLLNMDELERFKIVKNFAIQKMLDLNKEDLKELGVKHDVFFSEQTLHDNGKIEKTVKLLTDMGLIYEGSVPAPKGKVHAEWENRTQELFKSTKYGDDQDRPIRKADGSWTYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEATVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGTFASVQDVNHEVGKDIIRFMMLTRENNKTLDFDLIKVKEQSKENPIFYVQYAHVRTLSILSKAMETIPQSYNSFEAGTYDLSLLSSEEEIEIIKLLASWTKTLETAAKYFEPHRVAFYLINLASKFHALWNFGKENNDYRFIIENNVELTTARLALAKAIQKIIASGLEVIGVEPMTRM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NAD2_CAEEL
Sequence: MKPSPQRTLIKKLLVLLGPLVAVPLLFFGPEYRCLFSIIFLSTYWIGEAFPIGVTSLFPLALYPILQIVPSKQISPVYFKDSIVLFMCTLIMAMAVEATGLHRRIALKLLTKVGAKQPVMLLGFMCITSFISFFVSDTACTALMCPTAVALLMSMSDAVQHLKEDHRKPKPPPDDATVAEKLRIDDMTPQDAGFCKALILACAHASLIGGTAIITSTGPNLVFRENIHKRYPEGQVTMTYLQWMVFAIPPMFVYLLASYIILVCYFMGPSTFARWFERPSKEEAHLKKLIEKNIQTMYEDLGDVSWGEKSVFVFFILLIGSWISRDPGFTPGWGDLLPHRNFISDSVSGVLISCILFVWPKDPFDPIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLSRLISCGMKNIFVGMSSLPLQLTVTTIIVIMTEFASNVSTGSIFIPISLGVAESMGVHPLYLALPTTVACSFAFMLPISTPPNAVVYDTKVISMVEMIVCGFLLNIACILITSLNMNTWTYFIFSLNIFPENIVISSENSSYPVC
What is the function of this protein?
High-affinity sodium-dicarboxylate cotransporter that accepts a range of tricarboxylic acid-cycle intermediates with 4-5 carbon atoms.  There is no interaction with monocarboxylates (By similarity).
What are the official names of this protein?
Sodium-dependent high-affinity dicarboxylate transporter 2, Na(+)/dicarboxylate cotransporter 2, NaDC-2, ceNaDC2.
What is the protein family that this protein belongs to?
Belongs to the SLC13A/DASS transporter (TC 2.A.47) family. NADC subfamily.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: 14334_PSEMZ
Sequence: LDVELTVEERNLLSVGYKDSTLIMQLLR
What are the official names of this protein?
14-3-3-like protein 4.
What is the protein family that this protein belongs to?
Belongs to the 14-3-3 family.
Protein: TI10B_ORYSI
Sequence: MAASARPVGVGGERATSFAMACSLLSRYVRQNGAAAAELGLGIRGEGEAPRAAPGTMSLLPGEAERKKETMELFPQSAGFGQQDAITADSAADAREQEPEKRQLTIFYGGKVLVFNDFPADKAKGLMQLASKGSTVAPQNAVAPAPAAVTDNTKAPMAVPAPVSSLPTAQADAQKPARANASDMPIARKASLHRFLEKRKDRLNAKTPYQASPSDATPVKKEPESQPWLGLGPNAVVKPIERGQ
What is the function of this protein?
Repressor of jasmonate responses.
What are the official names of this protein?
Protein TIFY 10b.
What is the protein family that this protein belongs to?
Belongs to the TIFY/JAZ family.
What are the subcellular locations of this protein?
Nucleus.
Protein: CYB_BALED
Sequence: MTNIRKTHPLMKIVNDAFVDLPTPSNISSWWNFGSLLGLCLITQILTGLFLAMHYTPDTTTAFSSVAHICRDVNYGWVIRYLHANGASMFFICLYAHMGRGLYYGSYAFRETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIILALAMVHLIFLHETGSNNPTGIPSNMDKIPFHPYYTTKDILGALLLILTLLMLTLFVPDLLGDPDNYTPANPLSTPTHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALIPMLHTSKQRSMMFRPFSQFLFWVLIADLLTLTWIGGQPVEHPYVIVGQFASILYFLLILVLMPVTSLIENKLMKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: PDXS_BIFA0
Sequence: METTRNELNRNLAQMLKGGVIMDVTTPEQARIAEDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAIEIDYIDESEVLSPADDVYHIDKREFDVPFVCGAKNLGEALRRIEEGASMIRTKGEPGTGDVIQAVRHMRTMTKQIRELASLRDDEVYEAAKQLAVPYELAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKSGDPAKRAAAIVQATANWRDADLLARLSENLGEAMVGINEDEIETIMAARGE
What is the function of this protein?
Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia.  The ammonia is provided by the PdxT subunit.  Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively.
What are the official names of this protein?
Pyridoxal 5'-phosphate synthase subunit PdxS, PLP synthase subunit PdxS, Pdx1.
What is the protein family that this protein belongs to?
Belongs to the PdxS/SNZ family.
Protein: TSAD_SALA4
Sequence: MRVLGIETSCDETGIAIYDDKKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEAGLTASDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMASQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRSNGGDEQTRADIARAFEDAVVDTLMIKCKRALESTGFKRLVMAGGVSANRTLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGVTADLGVTVRPRWPLAELPAA
What is the function of this protein?
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.  Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB.  TsaD likely plays a direct catalytic role in this reaction.
What are the official names of this protein?
tRNA N6-adenosine threonylcarbamoyltransferase, N6-L-threonylcarbamoyladenine synthase, t(6)A synthase, t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD, tRNA threonylcarbamoyladenosine biosynthesis protein TsaD.
What is the protein family that this protein belongs to?
Belongs to the KAE1 / TsaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RECO_CERS1
Sequence: MMEWRDEGALLSVRRHGESSAIIEVFTAAHGRHAGVVRGGASRKIAPILQPGAQLDLTWKARLDEHMGAFTVEPLRSRTALLGDRLGLAGLNAICAMLHVTLPEREPHSTLWQESMALLDALDRPGWPPAYLRWEMRLLEETGFGLDLTRCAVTGSREDLAFVSPKTGRAVSRGAAGGWADRLFPLPLALLGQGPASAEEVRQGLAITGHFLGRELAPLLNGRPLPEARARLMELLARA
What is the function of this protein?
Involved in DNA repair and RecF pathway recombination.
What are the official names of this protein?
DNA repair protein RecO, Recombination protein O.
What is the protein family that this protein belongs to?
Belongs to the RecO family.
Protein: CYB_ELADA
Sequence: MTNIRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNIGVILLFTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSINPTGIPSDADKIPFHPYYTIKDILGMLLLVLFLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVSSILILILMPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEYPFIIIGQLASILYFLIILVLMPVTSTIENNLLKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: EX7S_PHEZH
Sequence: MSEPADIAAMTFEQALAELEQIVARLESGQAPLEDSIRMYERGAALKAHCETRLEAARLRVEKIVMGAGGAPASEPAEFG
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CXAR_HUMAN
Sequence: MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHDIREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAKVAAPNLSRMGAIPVMIPAQSKDGSIV
What is the function of this protein?
(Microbial infection) Acts as a receptor for Coxsackievirus B1 to B6.
What are the official names of this protein?
Coxsackievirus and adenovirus receptor, CAR, hCAR, CVB3-binding protein, Coxsackievirus B-adenovirus receptor, HCVADR.
What are the subcellular locations of this protein?
[Isoform 1]: Cell membrane; Single-pass type I membrane protein. Basolateral cell membrane; Single-pass type I membrane protein. Cell junction, tight junction. Cell junction, adherens junction. Note=In epithelial cells localizes to the apical junction complex composed of tight and adherens junctions (PubMed:12297051). In airway epithelial cells localized to basolateral membrane but not to apical surface (PubMed:11316797). SUBCELLULAR LOCATION: [Isoform 3]: Secreted. SUBCELLULAR LOCATION: [Isoform 4]: Secreted. SUBCELLULAR LOCATION: [Isoform 5]: Secreted.
Protein: IF1_RHIME
Sequence: MAKEEVLEFPGVVTELLPNATFRVKLENEHEIIAHTAGRMRKNRIRVLAGDKVLVEMTPYDLTKGRITYRFK
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds.  Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).  Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
What are the official names of this protein?
Translation initiation factor IF-1.
What is the protein family that this protein belongs to?
Belongs to the IF-1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DCUP_PROMP
Sequence: MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISMQPFLAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNIRQVEKLKELIPNESLSFVGEVLSSLKKDVKNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEEFPDTPIILYISGSAGVLERMAKTGVDIISLDWTVDIEEACKRIPTGIGIQGNVDPGILFGNKDSIKERIDNTFNKVKERKYILNLGHGILPGTPEENAKTFFEHGKKLTY
What is the function of this protein?
Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
What are the official names of this protein?
Uroporphyrinogen decarboxylase, UPD, URO-D.
What is the protein family that this protein belongs to?
Belongs to the uroporphyrinogen decarboxylase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SAS6_CAEEL
Sequence: MTSKIALFDQTLIASLLQPLSLNQPDFKAYKTKVKLKISEQRNETSGEKELKFEISRSDDFEFLFSETLNNEKYQILARDHDLTVDFDAFPKVIIQHLLCKNIVKNLEEDGEVDARKKAGYHSIADPGKPTEINIILDAEKNFCSFELFSKTPISKGKIFSIKLHAVRGDHLISHLLKICSSQAVKLSTFYKSADELASLRQKCGDLEKQVEKLSGVKEEFEEMSEKFKELEDEVELVKEERENIRLLVEDKEDEVADLKQDTESLQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRKLGELEADLKEKDSMVESLTETIGILRKELENEKLKAAENMDSFEKLSMENENLKEKIAHYRAQRFSPAPSGLPGLQTGLTNRLTPSFKPVLGPHTPYGANLNSRTPFRDNTTLNFQNSTIATPHAFRFNSQLIADETTGSSVTNTPPAQR
What is the function of this protein?
Central scaffolding component of the centrioles ensuring their 9-fold symmetry (PubMed:15572125).  Required for centrosome biogenesis and duplication (PubMed:15665853, PubMed:19081077).
What are the official names of this protein?
Spindle assembly abnormal protein 6.
What are the subcellular locations of this protein?
Cytoplasm. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole. Note=Localizes to centrioles, zyg-1 and sas-5 are required for centriole localization.
Protein: GREA_CLOK1
Sequence: MSGLKKYVMTYEGIKKLENELEYLKTVKRKEITEKIKVALSFGDLSENSEYDSAKNEQAFVEGRIVQLENMLKNASMVDEDEVPLDIVGIGSIVKVKDYDLDEEVEYLIVGSAEADPINNKISNESPVGKGLVGKKPGDVIEIQVPDGVSKYKILNIRR
What is the function of this protein?
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites.  The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes.  Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus.  GreA releases sequences of 2 to 3 nucleotides.
What are the official names of this protein?
Transcription elongation factor GreA, Transcript cleavage factor GreA.
What is the protein family that this protein belongs to?
Belongs to the GreA/GreB family.
Protein: DUSA_SALTY
Sequence: MQPETQSSALPAYRFSIAPMLDWTDRHCRYFLRLLSRQTQLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAQLAHCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYAFLCDFIDTVSGQGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKEHLRHMDGVMVGREAYQNPGILAAVDREIFGADTTDADPVAVVRAMYPYIERELSQGAYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADVAVLEQALKLVADKR
What is the function of this protein?
Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines.  Specifically modifies U20 and U20a in tRNAs.
What are the official names of this protein?
tRNA-dihydrouridine(20/20a) synthase, U20-specific dihydrouridine synthase, U20-specific Dus, tRNA-dihydrouridine synthase A.
What is the protein family that this protein belongs to?
Belongs to the Dus family. DusA subfamily.
Protein: ATPF_ALIFM
Sequence: MNATLLGQAIAFTLFVWFCMKYVWPPIMEAIEERQKKIADGLSAAERAAKDLDLAQANASDQLKEAKRAATEIIEQANKRKSQILDEAREEALVERQKILTQGEAELESERNRARDELRKQVATLAVIGAEKILERSIDVEAQKDILDNITAKL
What is the function of this protein?
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
What are the official names of this protein?
ATP synthase subunit b, ATP synthase F(0) sector subunit b, ATPase subunit I, F-type ATPase subunit b, F-ATPase subunit b.
What is the protein family that this protein belongs to?
Belongs to the ATPase B chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: PECTR_LACP7
Sequence: MNIYDVSQKAGVSIATVSRVINGNPNVSEKTKQKVLDVMKEIGYTPNVFARGLGLNTMKTIGIMCSDSSDTFLANAVYHLEQNLRKNGYDSFLCCTGYELHTKQKYLKLLLSKRVDAIVMVGSSFLEANKKDNAYIMEAADEVPIMLINGYLSHPRIYCTLCDDHQAVYDAVSKLITQGRKEILYLYNSKSYSGLQKLSGYKAALAAHELPLDENLMQMCPNNLADTKNLLNSLVKQGLNYDAVVTAEDLLAIGTIKFIKDSGRQIPQDVSIIGYNNSLLTTCCDPELTSIDNHVETLCISTISTLMRVLNGNDVPNKTTISNDLIVRKTTNF
What is the function of this protein?
Involved in control of pectin and galacturonic acid metabolism.  Probably represses a comprehensive set of pectin fermentation genes by binding a conserved palindrome at or downstream of their transcription start site to block transcription.  In the presence of galacturonic acid may activate transcription of acetate synthesis and other aspects of carbon metabolism.
What are the official names of this protein?
HTH-type transcriptional regulator Cphy_2742.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: O56B2_HUMAN
Sequence: MLVVLQELRDSNSSKFQVSEFILMGFPGIHSWQHWLSLPLALLYLLALSANILILIIINKEAALHQPMYYFLGILAMADIGLATTIMPKILAILWFNAKTISLLECFAQMYAIHCFVAMESSTFVCMAIDRYVAICRPLRYPSIITESFVFKANGFMALRNSLCLISVPLLAAQRHYCSQNQIEHCLCSNLGVTSLSCDDRRINSINQVLLAWTLMGSDLGLIILSYALILYSVLKLNSPEAASKALSTCTSHLILILFFYTVIIVISITRSTGMRVPLIPVLLNVLHNVIPPALNPMVYALKNKELRQGLYKVLRLGVKGT
What is the function of this protein?
Odorant receptor.
What are the official names of this protein?
Putative olfactory receptor 56B2.
What is the protein family that this protein belongs to?
Belongs to the G-protein coupled receptor 1 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: PRIC1_DROME
Sequence: MSSLSTGGGAGGSSGGPGGADAAAAPAAGQATVTATGNMEPAMVPRTANLLACKQWWRVCFLYGDQQKYYRQLYSKAAAQRLADANQEPDNARDREYDTVDCDLIAGQLDAVEDADDGIDLGDHSSTPKGGATTAGRPLFPHSSSPRRSKKLLRSLRAHVRGEKLPKNDTTTANESSEVTQRNARVTVLDDPFLFGIDADHLGDLVVRGKRYSTLDATENMARFYAEQEATAQVLEIIEQEEESPEQEAPKPALPPKQKQQRPVPPLPPPPANRVTQDQGTQPAAPQVPLQPLTAGDLQFLNLSLRQRSLPRSMKPFKDAHDISFTFNELDTSAEPEVATGAAQQESNEPISRTPLTQISYLQKIPTLPRHFSPSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPLPLQRHQQYLPPHHQQHPGAGMGPGPGSGAAAGPPLGPQYSPGCSANPKYSNAQLPPPPHHHHQLSPALSTPSPPSLLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSPGEQYRVRQLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGNVRQLMSARPCDGCDDLISTGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHAETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRYIMREGKPYCLHCFDAMFAEYCDYCGEAIGVDQGQMSHDGQHWHATDECFSCNTCRCSLLGRAFLPRRGAIYCSIACSKGEPPTPSDSSGTGMYTTPTPPTQRVRPHPQAPLPARIPSSHASSSPPMSPQQQQQHQATFNQAMYQMQSQQMEAAGGLVDQSKSYAASDSDAGVVKDLEHGGHMGGGDLTDFSGGRASSTSQNLSPLNSPGDFQPHFLPKPMELQRDGVYNFNEMSSNLDAAWSAKPTNSYHLQRQLLENPHTASMPELAGKLVAPPAHMQHLSQLHAVSSHQFQQHEYADILHPPPPPPGEIPELPTPNLSVASTALPPELMGSPTHSAGDRSLNTPMSTQSASHAPPHPVSILSGASSSSPMSGEPAKKKGVRFEGIPDTLPRSRSYSGNGAGTSGGGERERDRDKDKEGGGRHGHGHSSRRRRRRKSSSSSSHHRSGSGHRSHSTTRADTYAPAQPLSSSYQGPPSVLQAANLVHESPSRQQREREREREREESEESDVCSTCSSSSSSSEDYMMMYQLPQRRHYGGVRVSYVPNDALAYDRKRKPSELGGDKDKNCIIS
What is the function of this protein?
Acts in a planar cell polarity (PCP) complex; polarization along the apical/basal axis of epithelial cells.  Correct expression of the alternative isoforms is required for PCP signaling in imaginal disks.  PCP signaling in the wing disk requires the receptor fz and the cytoplasmic proteins dsh and pk.  These act in a feedback loop leading to activation of the jnk cascade and subsequent polarized arrangement of hairs and bristles.  Dgo and pk compete with one another for dsh binding, thereby modulating fz dsh activity and ensuring tight control over fz PCP signaling.  Vang, stan and pk function together to regulate the establishment of tissue polarity in the adult eye.
What are the official names of this protein?
Protein prickle, Protein spiny legs.
What is the protein family that this protein belongs to?
Belongs to the prickle / espinas / testin family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=Localized to the proximal wing cell boundary where fz and dsh localization is antagonized by binding the dsh DEP domain and preventing dsh cortical localization. Localization to the anterior photoreceptor cell membrane.
Protein: LPXA_ALIB4
Sequence: MNNIHKTAIIEEGAILGDNITIGAFTIIGKNVKIGDGTIIDSHTLIDGKTTIGKNNHIFSHASIGTIPQDLKFNGEDVELIIGDNNKIREYTLFNPGTIGGGSVTKIGSNNLFMGYVHVAHDCIIGDNCIFANGATLAGHVECDDFVVVGGLTPIHQFCKIGTQVMIGGASAVAQDIPPFCLAEGNKAVLRGLNLTGLRRRFDNREDIDAIKHAYRELFEVGKPLQDVARELLDNDKNKYVKELASFVLNTKRGIPFNRK
What is the function of this protein?
Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
What are the official names of this protein?
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, UDP-N-acetylglucosamine acyltransferase.
What is the protein family that this protein belongs to?
Belongs to the transferase hexapeptide repeat family. LpxA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS9_DESHY
Sequence: MAAQLQYQGTGRRKNAVARVRLIPGEGKVTINKRELAEYFGKKTLEMIVQQPFGVTDTAGKYDVVALAHGGGTTGQAGALRLGIARALLKADPSLRPALKRAGFLTRDPRMKERRKYGLKKARKAPQFSKR
What are the official names of this protein?
30S ribosomal protein S9.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS9 family.