PharMolix/UniProtQA huggingface dataset:
Protein: FTSH_BUCAP
Sequence: MVKNLIFWLVITVVLMSVFQNFNSSDTSNHRVDYSTFLSEVNQDQVREAYINGRIISVTKKDSSKYITYIPINDPKLLDNLLTKNVKIVGEIPEEPSLLISIFISWFPMLLLIGVWIFFMRQMQMGGGKGAMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETIDSLQIDDLMERREVRKPKGWLEVDQKKDI
What is the function of this protein?
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins.  Plays a role in the quality control of integral membrane proteins.
What are the official names of this protein?
ATP-dependent zinc metalloprotease FtsH.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the peptidase M41 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein; Cytoplasmic side.
Protein: HIS7_DESPS
Sequence: MVVIEKNRKSAISRKTTETDIQLELNLDGAGQHLIDTGVPFLNHMLTLFSVHGFLDLSLRAEGDIDIDDHHTTEDIGIVLGQAIAQALGNKGGISRYASVYLPMDEALVRIVIDLSNRPYLHYNAPVIEQKLGTFDSCLVKEFFRAVSQQAGMTLHIDMIHGENGHHIVEAIFKGFGRALSLAIEPLGTDGALSSKGCL
What are the official names of this protein?
Imidazoleglycerol-phosphate dehydratase, IGPD.
What is the protein family that this protein belongs to?
Belongs to the imidazoleglycerol-phosphate dehydratase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RECO_CLOK5
Sequence: MGDDFLAIFKTRAIIIKTQDIKESDKLVWLFTEKLGKISTIAKGSKKSRSPLFSTTLQFCYGDYVVYKGKSLYVINESSLIDSFQHLLNDLNDLTYASYFCELTDIAMDDGESSRELFRYLATSFYLIRSHAVDIETLARTFELKILKTTGYGLNFDYCALCRKKITSFEYLHLQYLGGICRECDKENSMHISYSTCSALKYLSSISMENVYKVVLTKEVKEELYKVLTLIISQNYFRKPKSLDILRNLISFEKNKV
What is the function of this protein?
Involved in DNA repair and RecF pathway recombination.
What are the official names of this protein?
DNA repair protein RecO, Recombination protein O.
What is the protein family that this protein belongs to?
Belongs to the RecO family.
Protein: RSMG_STRSV
Sequence: MTPQEFYQLLAQQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLKVGGKLLALKASNAPEELEEAKNALNLLFSKVQDNLSYALPNGDPRFITVVEKKKETPNKYPRKAGMPNKRPL
What is the function of this protein?
Specifically methylates the N7 position of a guanine in 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase G, 16S rRNA 7-methylguanosine methyltransferase, 16S rRNA m7G methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: WDY_AEDAE
Sequence: MDSIEEADTSHPQLLHRYLSQNDVEHLYRIFNKRKQLLPEELRTELTDLTGVEFQDEEFQTLFMKINANKDEYCQWDELVSYLILGFQNDDPLAVQESLDLPISQDMGMKLGRQTYPVTKIQYAPLVSYDGTVNWSQGFWVTSTREAVINFWKRDWKHLKTGKAFSVDLKRIKTMVLDTAILPDQNYFCVACLECELRFYDIIASGFTLKTIINRIPNAINSLYYHFSPDTRSKMILGDYVGHVRMIEFFPENKEPFKFDAATAITRMAFCDLVGGLCPQMTCVDYGRLLPDIVRQVEFIESRNSFVACSENDPLVPHHMRNKLQVSLVIQHTRKLDRRTKFKVFKGVTCFAFDSIKDFLVTGGPDGQLRLWDSRRSDKPTEILAGHNSAVVFMFLQDESLKLYSMDQKKIVKIWDVPNRTLIQTYSQFSSSMFKTVPACAYYSELNRELVVGANKVLSVSCCPKIALEVTDGESHTQPISVLLHNPLFKVIVSCGLDSFIIVWDYTGNRKLTIIQDAHTEVIHGILEKVQITAACFDPKLQLMVTGARNGELKIWNFNSGSLMSCMSIGSECEVTAVFWERTGILAMGWNHVIVEFPVGSTGIDFPSGVEWQKLHSDDILCASINRTEPKALASCSYSGEIILWMLETGQAYKRFDAAKPRQKIPVNFKKKRIPQPTRRQTRLSIFQPQEHWRQRRLTRIVMPATAELLRQLTIHNLLFLEARPFHPDYGTLLASLDTGRILVFSHHPDGGYMGAFSAVHMAGDRVIMMTTDSDNRFLFTGTYLGYIKIWLLENYFVPSGKQPKVNRAALRLQFPFLMDDVVPGRAKRSVANQPMPMLLSSYQAHRTCVTDLVYMHASQLLVSASSDRTIRIWTISGRYVGLLGSPVKWPTLDPDHPIARNYNFRIPPDLHREVSFTTAQVLRGGERFIKFKSRILQEASERRRTEAIETYGKPLEPPYLNTATFPYGPHTSYHPDPKLDFSFRQTPIFEHLSIPNLLKMKPVDSEKVLRDAKQLNFSNDGDRIDSYHEKKDNIFK
What are the official names of this protein?
WD repeat-containing protein on Y chromosome, WD40 Y.
Protein: ISTB_PSEAI
Sequence: MHELEVLLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERSENVILLGPPGVGKTHLAIALGVKAVDAGHRVLFMPLDRLIATLMKAKQENRLERQLQQLSYARVLILDEIGYLPMNREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDHVLATAILDRLLHHSTTLNIKGESYRLKEKRKAGVLTKNTTPISDDEMVKSGQHQ
What is the function of this protein?
One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat.
What are the official names of this protein?
Insertion sequence IS21 putative ATP-binding protein.
What is the protein family that this protein belongs to?
Belongs to the IS21/IS1162 putative ATP-binding protein family.
Protein: AROC_ALTMD
Sequence: MSGNSFGKLFTVTTFGESHGIAIGGVVDGCPPGLEITEEDLQVDLDRRKPGTSRYTTARREDDEVQILSGVFEGKTTGTSIGLLIKNKDQRSQDYGNIKDRFRPGHADYTYDQKYGSRDYRGGGRSSARETAIRVAAGGIAKKYLKEVHGIEVLGYLSQLGPVTVDKVDHSVTNTNPFFCPDESKLDALDEYMRDLKKSGDSIGAKVSVVAKNVPVGLGEPVFDRLDAEIAHAMMGINAVKGVEIGDGFDVINQKGSEHRDTLTPEGFSSNHAGGVLGGISTGQDIEVHMALKPTSSISVPGKTINKDNEEIDIVTKGRHDPCVGIRAVPIAEAMLALVLMDHLLRHRAQNTGVLSTTKPIAGQA
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: H32_ONOVI
Sequence: MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
What is the function of this protein?
Core component of nucleosome.  Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template.  Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability.  DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
What are the official names of this protein?
Histone H3.2.
What is the protein family that this protein belongs to?
Belongs to the histone H3 family.
What are the subcellular locations of this protein?
Nucleus. Chromosome.
Protein: RL6_HELPH
Sequence: MSRIGKRIIEIPSSVQASVEGSKLLFKNGKEKHELETHNRVKITLENNQLSFQPVGEDAQSRAYWGTYGALANNIVIGLSTGFSKILEVNGVGYKVALGNKTLDLSLGFSHPVKYPIPAGIEMVVEKNTITIKGSDKQKVGQVAAEIRSFRPPEPYKGKGVKYSDEVIIRKAGKTAKK
What is the function of this protein?
This protein binds to the 23S rRNA, and is important in its secondary structure.  It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
What are the official names of this protein?
50S ribosomal protein L6.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL6 family.
Protein: RBL8_ARATH
Sequence: MEVPTESKTTQIDEISHNLSFTTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVLFAVTMGVNDCSGNSHGHCSAKLLGRFSFQSLSENPMLGPSASTLEHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLRIICLLVFCGILAGVLLAACWGVNLNRHCHWCRYVDCVPTKKWSCSDMTTSCEVYSSKP
What is the function of this protein?
Probably essential for the meiosis stage-specific callose accumulation and pollen exine formation.
What are the official names of this protein?
RHOMBOID-like protein 8, AtRBL8, Protein KOMPEITO.
What is the protein family that this protein belongs to?
Belongs to the peptidase S54 family.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Multi-pass membrane protein.
Protein: MSRB2_RHIME
Sequence: MTYRKTDEEVSKLTPEQYRVTQQNGTERPFTGEYTDNKRPGIYVDIVSGEPLFASADKFDSGCGWPSFTKPIVPANVNELRDNSHGMIRTEVRSAHGDSHLGHVFPDGPQDRGGLRYCINSAALRFIPREEMEAEGYGGYFNQVEDI
What are the official names of this protein?
Peptide methionine sulfoxide reductase MsrB 2, Peptide-methionine (R)-S-oxide reductase 2.
What is the protein family that this protein belongs to?
Belongs to the MsrB Met sulfoxide reductase family.
Protein: FBX21_PONAB
Sequence: MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCRRLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKRFFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILNNLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHPSLAFKAGESSMIVEIELQSQVLDAMNYVLYDQLKFQGNRMDYYNALNLYMHQVLIRRTGIPISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTVKECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYPDQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVGVEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGSCRYAAQENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPEDLEFVYETVQNIYSAKKENIDE
What is the function of this protein?
Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.
What are the official names of this protein?
F-box only protein 21.
Protein: ADF2_ARATH
Sequence: MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN
What is the function of this protein?
Actin-depolymerizing protein.  Severs actin filaments (F-actin) and binds to actin monomers (PubMed:15563618, PubMed:19794115).  Required for normal cell growth, plant development, cell organ expansion and flowering.  Essential for root-knot nematode infection (PubMed:19794115).
What are the official names of this protein?
Actin-depolymerizing factor 2, ADF-2, AtADF2.
What is the protein family that this protein belongs to?
Belongs to the actin-binding proteins ADF family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: PSMD6_DICDI
Sequence: MDESIKKLPDLAIADLIFTVKLEGKTGTESYNKLIKEIETHKMLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAYLAKSDFYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKAQSLVEEGGDWDRKNRLKTYEAVYKMSIRQFKEASDLYLETVASFTSTEFIDYSRFIQYLIFTSLLHLDRVSLKQKVIDSPDVLSVINDTPKLQDLLQSFYNGDYANFFGALAHFSDSIKGDRYLAEHSRFFTREMRILAYNQFLESYSSVKLESMSNQFGVSYDFIDRELSRFVAAGRLNCKIDKVSGVIETTRSDAKNHLYKTTLQQGDNLLNRVQKLSRVINV
What is the function of this protein?
Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
What are the official names of this protein?
26S proteasome non-ATPase regulatory subunit 6, 26S proteasome regulatory subunit RPN7, 26S proteasome regulatory subunit S10.
What is the protein family that this protein belongs to?
Belongs to the proteasome subunit S10 family.
Protein: RL22_BACTN
Sequence: MGARKKISAEKRKEALKTMYFAKLQNVPTSPRKMRLVADMIRGMEVNRALGVLKFSSKEAAARVEKLLRSAIANWEQKNERKAESGELFVTQIFVDGGATLKRMRPAPQGRGYRIRKRSNHVTLFVGAKSNNEDQN
What is the function of this protein?
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L22.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: YR070_MIMIV
Sequence: MIYARANPELINPVTVPTEISEVVLVLANTIRRSPAFTGILKPVTIPLNTVPTDINAEDATSNSTIAPAKGSNTPGFAASSLYTCVLKNIGSNTAEIATETWNAVANDVITVSRGALHAIFGNNPCTGPVKSKLTPTNVTLGDDTPKSYDAPVSAIPPPATATTANATGVKPLE
What are the official names of this protein?
Uncharacterized protein R70.
Protein: RL30_BRADU
Sequence: MAKAAKTIKLEQTGSAIRRHHSQRSTLIGLKLNKIGRTSELPDTPAVRGMIEKVHHLVRIVDEK
What are the official names of this protein?
50S ribosomal protein L30.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL30 family.
Protein: Y025_MYCTU
Sequence: MSEQAGSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQYTEPAR
What are the official names of this protein?
Uncharacterized protein Rv0025.
What is the protein family that this protein belongs to?
To M.tuberculosis Rv0026 and Rv0739.
Protein: RLIG_BPTS2
Sequence: MSSLAPWRTTSWSPLGSPPSLEDALRLARTTRAFAVRRDGEGRALVTYLYGTPELFSLPGARELRGIVYREEDGTVLSRPFHKFFNFGEPLAPGEEAFKAFRDSMVPLFVAEKVDGYLAQAYLDGGELRFASRHSLNPPLVGALLRKAVDEEAMARLGKLLAAEGGRWTALLEVVDPEAPVMVPYQEPGVYLLALRSIGEGHYLLPGVHFPLPEALRYVRWEPRMDFDPHRFRGEIRDLQGVEGYVVTDGAEFVKFKTGWAFRLARFLMDPEGVFLEAYAEDRLDDLVGALAGREDLLRAVARAQDYLAGLYGEAVGAGDALRRMGLPRKEAWARVQEEAGRWGGFAPAYARAAMAAYEGGEAREAFLVELRKRSARKALEALHLFPRVGGELRG
What is the function of this protein?
RNA ligase that ligates single-stranded nucleic acids in an ATP-dependent manner (PubMed:15642699).  Catalyzes both inter- and intra-molecular single-stranded DNA (ssDNA) ligation to >50% completion in a matter of hours at an elevated temperature, although favoring intra-molecular ligation on RNA and single-stranded DNA substrates (PubMed:15642699).  Is able to catalyze the adenylation reaction of ssDNA 3'-terminal phosphate (ssDNA 3'p) to 3'-adenylated DNA (ssDNA 3'pp5'A) (PubMed:25324547).  Does not have significant 3'-adenylation activity with a 3'-phosphorylated nicked dsDNA substrate (PubMed:25324547).
What are the official names of this protein?
RNA ligase 1, TS2126 RNA ligase 1.
Protein: YDFC_ECOLI
Sequence: MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR
What are the official names of this protein?
Uncharacterized protein YdfC.
Protein: EIF3L_DROER
Sequence: MYGGDEYANNSEYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARISGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTDKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNIKKQLEAISQGVDPQTVAGDFGKLSFYKMLGYFSLVGLLRVHSLLGDYYQAIKVLEPIEIHKKSAYSHIPACQISTSYYVGFAYMMMRRYADAIRTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAADAPMEDYVKDPMEHQLLVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASFIDPNASEDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI
What is the function of this protein?
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.  The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
What are the official names of this protein?
Eukaryotic translation initiation factor 3 subunit L, eIF3l.
What is the protein family that this protein belongs to?
Belongs to the eIF-3 subunit L family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MKRN1_SERQU
Sequence: MAEAAAASTAASGVIGGWTKHVTCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEHCKPAKNEELPAPQMLPLPSASLAGPSDPEPSGPTPVPGAQDWVNAAEFVPGQPYCGRAEQAKVESSVPLIEEFDSYPAPDNKQLRKQLCPYAAVGECRYGINCAYLHGDVCYMCGLQVLHPTDNNQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKANPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKDDKQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNSRNRNSRRTPLWDIYDERESTDSFDNEDEEMVTFELSEMLLMLLAAGTDDEEVIIRPPSCATSSGRLDPTVTRYRKAC
What is the function of this protein?
E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
What are the official names of this protein?
Probable E3 ubiquitin-protein ligase makorin-1, RING-type E3 ubiquitin transferase makorin-1.
Protein: PRT2_SCOSC
Sequence: MPRRRRRASRPIRRRRRARRSTAVRRRRRVVRRRR
What is the function of this protein?
Protamines substitute for histones in the chromatin of sperm during the haploid phase of spermatogenesis.  They compact sperm DNA into a highly condensed, stable and inactive complex.
What are the official names of this protein?
Sperm protamine alpha isoform 2, Scombrine alpha-2.
What are the subcellular locations of this protein?
Nucleus. Chromosome.
Protein: RL9_WIGBR
Sequence: MQIILLKKIINKGNIGDKIKVKAGYARNFLFPKKIAIIASEKNLKFFEKKRKILEEQSKYENFKLKERFRNIKSLKEIEIYCKAGSKGKLFGSIGANHIIEKIKERGIRIMKNEIKLTNGPLKTIGKHNIKIKVKSNMCTEICVILKNNI
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: SYFB_YERPS
Sequence: MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNADKLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGESSEGMLCSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDVAVVNQLPLTEPDMAEVVASINDTLPIRVDAPQACPRYLGRVVKGINVKAATPLWMREKLRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATEGEELTLLDGTKVKLNADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDASHRYERGVDPALQHKAIERATRLLIDICGGEAGPVVDVTTASELPKQATITLRREKLDRLIGHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDVPVRADLVMTKHREASLSLKRVKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILPNPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAGVIAGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHPGQSAAIYLAGEHIGFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAREISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISLVLQDTARTLEEEEIAATVAKCVEALKQRFQASLRD
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ASNA_SALSV
Sequence: MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAEVHKQFGLAPFLPEQIQFVHSQELLSRYPDLDAKGRERAIAKELGAVFLVGIGGKLSDGHRHDVRAPDYDDWSSASELGYAGLNGDILVWNPVLEDAFELSSMGIRVDADTLMRQLALTGDEDRLQLEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAQVRESIPAIL
What are the official names of this protein?
Aspartate--ammonia ligase, Asparagine synthetase A.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. AsnA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LPTD_POLSJ
Sequence: MRRASRSPFILSPVAHAVSRLVLCATLGWTYAGSGHAQVPAPAGGSEVPLGARPPASAPVAAQQETPLKLKSSPALAEEVPNGPGDEGPTFVFGDSVSGRPNLETVIDGNAELRRGATSIRADRIEYYQPEDRVKSRGNVRINNAGNRFEGPELEITLDRFEGFFTQPRYRFLSNGGNGQAERVDFIDDKHLTAHRASYTTCERDNEASWKPAWELRARSFEFDFDEEVGVANGAVLRFKNVPILGFPKFSFPLSDKRKSGLLPPTLNMSSVNGFEVRQPYYFDIAPNRDATFSPAIMTKRGVDLAGEFRYLEPTYKGELRANILPGDKLRNRDRWSYGYQHSGTIDSGLSAIGNLGVNLNLSRVSDNDYWRDFPIASNSTTQRLLAQDATVSWNRGFFAAAVRTLKWQTLQDLSAPIVPPYDRLPQFTANYTRVDAPLLGLGRGFDWSVEGDYTRFSADRTLTGQPNSNRAFTRAQLSHPWLSPAGFITPKMQLHATSYQFDAPLVNGARSASRTVPTFSLDSGLQFERQAGFLGRSFTQTLEPRAFYVRTPYRDQSLLPNYDSGANDFNFATVFTENAFVGNDRISDANLLTLGVTSRLLDPATGAEAVRVGVAQRLRFADQRVTLPGALPITDRISDLLVGASVNWVPQWSFDSTVQYNPKTKQSERSSIGVRYNPGNYRVISAAYRRQRNISEQIDVGWQWPLNDLWGDKGRDLGAGQGQGGGRYYAVGRLNYSVPDRKLVDAIVGVEYDGCCWIGRVVLQRTQNGTATSDTRILFQLELVGFSRIGANPLETLKSNVPRYQYLREKINTPSRFTTYD
What is the function of this protein?
Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
What are the official names of this protein?
LPS-assembly protein LptD.
What is the protein family that this protein belongs to?
Belongs to the LptD family.
What are the subcellular locations of this protein?
Cell outer membrane.
Protein: YORZ_BACSU
Sequence: MNHICDICKEYISGKTICLRISDEKTYVDFNCCESCAKGYSDKVKNECSNLSVKKTLEHLGLNIKYKIRG
What are the official names of this protein?
SPbeta prophage-derived uncharacterized protein YorZ.
Protein: KTHY_UREPA
Sequence: MILTKNSNEKKPLKKGLFIVFEGIDGAGKTSILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREFFLKNLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQGIVQNQSLDVIYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFDNTNAFDSQNKQFYEKLLKQYPSVFKVYNQPKKIIFIDANKNENEVLCEVKEQLLKIFKEHKYI
What is the function of this protein?
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.
What are the official names of this protein?
Thymidylate kinase, dTMP kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate kinase family.
Protein: RAB18_CHICK
Sequence: MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVKLSNKEEGHGGGACGGYCSML
What is the function of this protein?
The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes (By similarity).  Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion (By similarity).  Required for the localization of ZFYVE1 to lipid droplets and for its function in mediating the formation of endoplasmic reticulum-lipid droplets (ER-LD) contacts (By similarity).  Also required for maintaining endoplasmic reticulum structure (By similarity).  Plays a role in apical endocytosis/recycling (By similarity).  Plays a key role in eye and brain development and neurodegeneration (By similarity).
What are the official names of this protein?
Ras-related protein Rab-18.
What is the protein family that this protein belongs to?
Belongs to the small GTPase superfamily. Rab family.
What are the subcellular locations of this protein?
Apical cell membrane. Lipid droplet.
Protein: ESR2_ORENI
Sequence: MMAAASSPEKLLQLQEVDSSRAGSRILSPILGSSSPGLSHETSQPICIRSPYTDLGHDFTTIPFYSPTIFSYGGPSISECSSVHQSLSASLFWPSHGRVGTPITLHCPQGRSQQGQSAQTPWDSVITTSKSVRRRSQESEESMVSSGGKADLHYCAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMTKCGIRKERGNYRNSQARRLTRLSSQGKTAEPKGITGPAEGSLNKPEKPALTPEQLIERILEAEPPEIYLVKDAKRPLTEASVMMLLTNLADKELVHMISWAKKIPGFVELSLVDQVHLLECCWLEVLMIGLMWRSVDHPGKLIFCPDLSLSREEGSCVQGFVEIFDMLIAATTRVRELKLQREEYVCLKAMILLNSNMCLSSSDCSEDLQSRSKLLRLLDAMTDALVLAIGKTGLTFRQQYTRLAHLLMLLSHIRHVSNKGMDHLHCMKMKNIVPLYDLLLEMLDAHIMHSSCLPHQPPQQDSKDQSEVPAPLHSSAGGPSNTWTPSSARAGGESQ
What is the function of this protein?
Binds estrogens with an affinity similar to that of ER-alpha, and activates expression of reporter genes containing estrogen response elements (ERE) in an estrogen-dependent manner.
What are the official names of this protein?
Estrogen receptor beta, ER-beta, Nuclear receptor subfamily 3 group A member 2.
What is the protein family that this protein belongs to?
Belongs to the nuclear hormone receptor family. NR3 subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: RS12_DESVH
Sequence: MPTINQLIRKERKKVVKRKKTPALQACPQRRGVCTRVYTTTPKKPNSALRKVARVRLTNGLEVTAYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIVRGTLDTSGVQDRRQGRSKYGAKRPK
What is the function of this protein?
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone.  Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together.  The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.