PharMolix/UniProtQA huggingface dataset:
Protein: GREA_VIBPA
Sequence: MEKVPMTLRGEQMLRTELERLLKLRPQISEAIAEARELGDLKENAEYHAAREEQGICEAQIRDIEYKLSVAQVIDVTKMENTGKVIFGSTVTLIDVDTDEEKTYQIVGDDEADIKAGRISVSSPIARGLIGKMEGDEVAIQTPGGAKDFEIDRVEYI
What is the function of this protein?
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites.  The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes.  Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus.  GreA releases sequences of 2 to 3 nucleotides.
What are the official names of this protein?
Transcription elongation factor GreA, Transcript cleavage factor GreA.
What is the protein family that this protein belongs to?
Belongs to the GreA/GreB family.
Protein: KHSE_CLOBH
Sequence: MVEVRVPATSANIGPGFDCLGVAVNMYNKFFVEEIEEGLIFEGCADKFKNENNLIYVAMKKCFDKIGYKPTGLRIKIESDIPVSRGLGSSAACVVGGIVSANELAGGALNKKELLDLAVEVEGHPDNVNPAFCGGMTASISDNREVIYSKVKVSEGIKFCALIPDFTLSTEKARAVLPKSIDYKDGIFNVGRTALMISALNNGDFHLIKYACKDKLHQDYRAKLIENFYSIKKQCEKLNSLGVFLSGAGPTIMVMLREEDKDFSKNIKSFLETLKNKWEVRELKIDKLGTVVNNCKV
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
What are the official names of this protein?
Homoserine kinase, HK, HSK.
What is the protein family that this protein belongs to?
Belongs to the GHMP kinase family. Homoserine kinase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MOBA_PSEPF
Sequence: MTSNTPLPPCSILLLAGGRGQRMGGQDKGLVEWHGEPLIVHLHRKVRPLTDDLIISCNRNRERYAPFADRLVSDDEEDFPGPLAGIRAGLKAARHTHLLVLPCDVPRIDLALLHNMREAAGLNSEKPLMLRHDDHWEPLLCVIPVALLPAFENAWNAGERSPGRVMRNLDAQALVCPDNDPRLANLNTPELLSSHNTVSD
What is the function of this protein?
Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
What are the official names of this protein?
Molybdenum cofactor guanylyltransferase, MoCo guanylyltransferase, GTP:molybdopterin guanylyltransferase, Mo-MPT guanylyltransferase, Molybdopterin guanylyltransferase, Molybdopterin-guanine dinucleotide synthase, MGD synthase.
What is the protein family that this protein belongs to?
Belongs to the MobA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CXG3_BOVIN
Sequence: MCGSFLRRVAAEESRHPTPVGRLLLPALLGLRLVLLAAGGTGVFGGGEEQSEFVCHTQQAGCKAVCYDAFHPLSPLRFWAFQVTLVAVPSALYMGFILYHVIWHWEASEKVKTEEETLSQGEKGGEASRAGSSRLLWAYVAQLGVRLALEGAALGGQYHLYGFRMPSSFVCRLEPCLGSTNCYLSRPSEKSIFLKTMFGVTGLCLLFTLLELVLLGLGRWWRIWRHKSPSSNYSPTSQSAKRCKAPTDNFPVVEIRERPGEAGERGSEVPLSARP
What is the function of this protein?
One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
What are the official names of this protein?
Gap junction gamma-3 protein, Gap junction epsilon-1 protein.
What is the protein family that this protein belongs to?
Belongs to the connexin family. Gamma-type subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein. Cell junction, gap junction.
Protein: PNP_RICPR
Sequence: MFNEITKSVMWNGQVLEISTGKIARQANAAVTVKMGNSILLCTCVVANKVKDGIGFFPLTINYREMAYSAGKIPGGFFKREGKASDREILVSRLIDRPIRPLFHQAFMHETHVTCSVLSYDPATPVDILAIIGASAALSISPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVAGTEDSVMMVESEAHLLSEDKMLEAVKFGFESFQTVIKLIKELAKEAKKPKFEMQDLYPSSLKKEIEKLFTKEVEQAFEIKSKQERSTDLALIYEKVLTHFVRDIENKKYNNYQIESALKAISADILRNKILEKNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSTTFGTSLDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKVQFPYSIRVVAETTESNGSSSMATVCGSSLALMHAGVPIKAPVAGIAMGLVKESNKFAVLSDIIGDEDYFGDMDFKVAGTSSGITALQMDIKISGIDFKIIQIALEQARLGRLHILEQMNKVISKPNSELSKNAPSSTTVKIDKDKIKDIIGPGGKIIKEICETSNAKIDISDDGTVSIYASDRDKIKIALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISDARIDKVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNAYKDHSSNNTKQKNNVKDDSESEQRRDTSKKRTWNEDNNTEMSEVITERKYFT
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS18_BARBK
Sequence: MSDINQNLARRPFNRRRKTCPFSGTNVAKIDYKDIKLLQRYISERGKIVPSRITAVSQKKQRELANAIKRARFLGLLPYVVK
What is the function of this protein?
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S18.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS18 family.
Protein: MSMB_PAPAN
Sequence: MNVLLGGFVIFATFVTLCNASCSFMPNERFPGDSTRECTDLKGNKHPINSKWQTDNCEACTCYETEIICCTLIATPVGYDKNKCQRIFKKEECKYIVVEKKNPKKTCPIDQWIL
What are the official names of this protein?
Beta-microseminoprotein, Prostate secreted seminal plasma protein, Prostate secretory protein of 94 amino acids, PSP-94, PSP94.
What is the protein family that this protein belongs to?
Belongs to the beta-microseminoprotein family.
What are the subcellular locations of this protein?
Secreted. Note=Sperm surface.
Protein: UVRC_PHOPR
Sequence: MSEALDEKSFDAKSFLKTVTHQPGVYRMYDAVGDVIYVGKAKDLKKRLSSYFRINVAGEKTRALVKNICKVDVTVTHTETEALILEHNYIKLYLPKYNVLLRDDKSYPYIFLSNHHHPRLSIHRGTKKRKGEYFGPYPDAGAVRESLHLMQKLFPIRQCEDSVYANRSRPCLMYQIGRCLAPCVKELITEKDYEDQVSFARLFLQGKDRQVIASLVEKMEQASQSLNFEQAATFRDQIQALRRVQEQQFVSHDSEDDLDVIGIAHQNGMACIHALYIRQGKILGSRSYFPKMPSDAELTEVLSSFITQFYLNQAEGRVIPSVIILGENLGDDAAVITETLSDIAGRKIELKVNPRGNRARYLKLAQTNAMTALTSKLSHKMTIHERFSELRKALNLETISRMECFDISHTMGEKTVASCVVFNQEGPFKQDYRRYNITGITGGDDYAAMGQVLERRYGKPMEPEKIPDIIFIDGGRGQLSRAYNVVKPFMDEWPKQPLLIGIAKGVTRKAGLETLIFITGEEFSLPSDSPALHLIQHIRDESHNHAISGHRAQRAKVRKRSALEDVEGIGPKRRQALLKFMGGLHELKRASREEIAKVPGISKALAEKIYDALQHG
What is the function of this protein?
The UvrABC repair system catalyzes the recognition and processing of DNA lesions.  UvrC both incises the 5' and 3' sides of the lesion.  The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
What are the official names of this protein?
UvrABC system protein C, Protein UvrC, Excinuclease ABC subunit C.
What is the protein family that this protein belongs to?
Belongs to the UvrC family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ISPDF_RHORT
Sequence: MAKVAALIVAAGRGKRFGGDLPKQYQTLGGRPILRHTLARFAAHPDVALVRAIIHPEDRDLYGAAAHGLATLLDAVEGGAERQDSVRLGLESLTDVAPDYVLIHDGARPLVDGALIDRVIAALADHPGAIPALAVADTLKRGAGGMIGQTVDRAGLWRAQTPQGFRYDAILAAHRAQAGTMLTDDAAVLEAAGGAVALVDGAEDNAKITTFADLERAERLFRGEGEQRIGSGFDVHRLGPGDFVTLNGIRIPHSHGLVGHSDADAPMHALTDALLGCLNAGDIGRHFPPSDMRWKGADSAIFLRHAAALITALGGRILNVDITILCEQPKIGPHRARMSARLAEILEISATRVAVKATTTEELGFTGRGEGIAAQATALITLPF
What is the function of this protein?
Bifunctional enzyme that catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
What are the official names of this protein?
Bifunctional enzyme IspD/IspF.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the IspF family.
Protein: RL32_AQUAE
Sequence: MAVPKAKTSKWRRNQRRAQNFFNKFRRSLPSLSVCSNCGERIIPHRVCPYCGHYKGKEVIETE
What are the official names of this protein?
50S ribosomal protein L32.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL32 family.
Protein: ACDB1_METMA
Sequence: MAEFPFEISPMFEGERVRKEGMFVELGGPKSLGLELVRAADMDAIEDDKVTIIGPDLKDMEEGKTYPWAMIFNIGGELVEPDLESVVERRVHDFINYCQGIMHLNQRYDVWMRVSKDTAAKMDSFEPFGKAVMMLFKTELPFIEKMQVTFYTDKDEVEKQMETAKEIFKARDARTKDLHDEDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAINWFDGRAAAKVDPEGPQFEIAKGDLLDAVTGEYTGVNEIAKKLSSGEFDKIKLHSFFDSPHTSCGCFEVVGFYIPEVDGIGWVDREYQGMAPNGIGFSTMAGQTGGGKQIVGFLGIGVNYFYSPKFIQADGGWNRVVWLPSKLKEKIDEAIPADLKDKIATENDASDIESLKAFLQEKNHPVVATWAAAEEEEEEEEEEEEVAVAAAPMMMPAAGFQMPAMPMMSGGSSGGIKLTFKNAKITIDRMIISEKKEKK
What is the function of this protein?
Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy.  The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA.  The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron-sulfur protein (the gamma-delta complex).
What are the official names of this protein?
Acetyl-CoA decarbonylase/synthase complex subunit beta 1, ACDS complex subunit beta 1, ACDS complex acyltransferase 1.
What is the protein family that this protein belongs to?
Belongs to the CdhC family.
Protein: PARI_DANRE
Sequence: MARVFRRECHRVLDSERTTIQGADGMLMVPQLAIAGVNKQERGDFGVALSEVLAVWKYFLLDKLQLSHKDIPLPQSYDLIRKEYDCFLKRTNTVDLIDVFSMFKELRLNEDPEEPLTTMQMFQFLFGENESSEKPSQPVCPATPSCKAADCSPQIQRVVRRVFCSYLDLLVNSKNDLALTYTLDNPNRSLGHTAFTDLRHAACDSASSLFLTVTSFVRAIQLGGKGYAPPESHPLRKHVKGLSEFLNFVDQCQDILGETPNPREAGCKLVSSIRAALVKGRSAGDPVYLAAEESTKSLKERIGQIHAMHTQSTVGTGISPARPKAYAINHATAYGGRETVKVLMALLDEEALALPCRNKAELLSEDHAALNGSTGACLLALYKSPEAPTGSSPKSLRNRVLSQQEHIKSKVVRPTIRSQFACTYKEEELPLNRVLEFPSTSQIPTCVHPAPKKASSESDNGMDNRFKEATNLRCEGPGQSALGEHSGNAWNQTGGKSTQPEPLRRATGTLKRKLANRECTEQGREENQPPQKRPPAKAATGGPGKRNNKAVSKKLIAGQGKLTGFFRL
What is the function of this protein?
Required to suppress inappropriate homologous recombination, thereby playing a central role DNA repair and in the maintenance of genomic stability.
What are the official names of this protein?
PCNA-interacting partner, PARI, PARP-1 binding protein, PARP1-binding protein, PARPBP.
What is the protein family that this protein belongs to?
Belongs to the PARI family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Note=Localizes to chromatin.
Protein: NEPR1_CAEEL
Sequence: MAIQARRMPEDPSTACEDLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANEKIEIFQIPMIDMFLTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKPAVRNSAP
What is the function of this protein?
May form with the serine/threonine protein phosphatase scpl-2 an active complex dephosphorylating and activating lipin-like phosphatases.  Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at different levels.  May play a role in nuclear membrane dynamics being crucial for early development of the embryo.
What are the official names of this protein?
Nuclear envelope phosphatase-regulatory subunit 1 homolog, NEP1-R1, Transmembrane protein 188.
What is the protein family that this protein belongs to?
Belongs to the CNEP1R1 family.
What are the subcellular locations of this protein?
Nucleus membrane; Multi-pass membrane protein. Cytoplasm.
Protein: ATPA_SALEP
Sequence: MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPVDNDGFSAVEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELAKIGSFEAALLAYVDRDHAPLMQEINQSGGYNDEIEGKLKGILDSFKATQSW
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: PEPA_ASPOZ
Sequence: MVNTSLLAALTAYAVAVSAAPTAPQVKGFSVNQVAVPKGVYRHPAAQLAKAYGKYHATVPTQVAAAAAATGSVTTNPTSNDEEYITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA
What is the function of this protein?
Secreted aspartic endopeptidase that allows assimilation of proteinaceous substrates.  The scissile peptide bond is attacked by a nucleophilic water molecule activated by two aspartic residues in the active site.  Shows a broad primary substrate specificity.  Favors hydrophobic residues at the P1 and P1' positions, but also accepts a lysine residue in the P1 position, leading to the activation of trypsinogen and chymotrypsinogen A.
What are the official names of this protein?
Aspergillopepsin-1, Aspartic protease 2, AOAP, Aspergillopepsin I, Aspergillopeptidase A.
What is the protein family that this protein belongs to?
Belongs to the peptidase A1 family.
What are the subcellular locations of this protein?
Secreted.
Protein: RNC_MOUSE
Sequence: MQGNTCHRMSYHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPAQYQYEPPSAPSSSYSNSQAPSFMPPRPDFVPYPPPAAPSAQGPLPPCPVRPPYPNHQMRHPFPVPPCFPPMPPPMPCPNNPPASGAPPGQGTFPFMVPPPSMPHPPPPPVMPQQVNYQYPPGYSHSFPPPGFNSYQNNSSSFPPSANSSSTPHFRHLPPYSLPKAQNERRSPERLKHYDDHRHRDHSHGRGERHRSLERRERGRSPERRRPESRYRSDYDRGRTPPPRHRSYERSRERDRERHRHREARRSPSLERSYKKEYKRSGRSYALPVAPEPAGCTPELPGEMIKTTESWAPPPENVNHRSPSREKKRARWEEEKDRWSDSQGSGKEKNYTSIKEKEAEEVPPEKTEEEEEELLKPVWIRCTHSESYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGNRQEKAKAARPPWEPPKTKLDEDLESSSESECETDDDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPEEAEDIKK
What is the function of this protein?
Ribonuclease III double-stranded (ds) RNA-specific endoribonuclease that is involved in the initial step of microRNA (miRNA) biogenesis.  Component of the microprocessor complex that is required to process primary miRNA transcripts (pri-miRNAs) to release precursor miRNA (pre-miRNA) in the nucleus.  Within the microprocessor complex, DROSHA cleaves the 3' and 5' strands of a stem-loop in pri-miRNAs (processing center 11 bp from the dsRNA-ssRNA junction) to release hairpin-shaped pre-miRNAs that are subsequently cut by the cytoplasmic DICER to generate mature miRNAs (PubMed:26255770).  Involved also in pre-rRNA processing.  Cleaves double-strand RNA and does not cleave single-strand RNA.  Involved in the formation of GW bodies.
What are the official names of this protein?
Ribonuclease 3, Protein Drosha, Ribonuclease III, RNase III.
What is the protein family that this protein belongs to?
Belongs to the ribonuclease III family.
What are the subcellular locations of this protein?
Nucleus. Nucleus, nucleolus. Note=A fraction is translocated to the nucleolus during the S phase of the cell cycle. Localized in GW bodies (GWBs), also known as P-bodies.
Protein: MSRQ_SALPC
Sequence: MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLLVSPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAILAPIHYLWSVKILSPQPVIYAALALALLALRYRKFRQWWR
What is the function of this protein?
Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons.  Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms.  MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation, including the primary periplasmic chaperone SurA and the lipoprotein Pal.  MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain.
What are the official names of this protein?
Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, Flavocytochrome MsrQ.
What is the protein family that this protein belongs to?
Belongs to the MsrQ family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: PSBT_THUPL
Sequence: MEALVYTFLLVSTLGIIFFAIFFREPPKVPDKGGK
What is the function of this protein?
Seems to play a role in the dimerization of PSII.
What are the official names of this protein?
Photosystem II reaction center protein T, PSII-T.
What is the protein family that this protein belongs to?
Belongs to the PsbT family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: RL2_STAAW
Sequence: MAIKKYKPITNGRRNMTSLDFAEITKTTPEKSLLKPLPKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGINAKVDSIQYDPNRSANIALVVYADGEKRYIIAPKGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGASAQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGRAPIGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKKK
What is the function of this protein?
One of the primary rRNA binding proteins.  Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation.  It has been suggested to have peptidyltransferase activity; this is somewhat controversial.  Makes several contacts with the 16S rRNA in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L2.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL2 family.
Protein: FTSH_ECO57
Sequence: MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNAGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK
What is the function of this protein?
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins.  Plays a role in the quality control of integral membrane proteins.
What are the official names of this protein?
ATP-dependent zinc metalloprotease FtsH.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the peptidase M41 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein; Cytoplasmic side.
Protein: CBID_HALHL
Sequence: MSEDTSQPTDQQAGTALRRGWTTGACAAAAARAAFTGLVSGSFPDPVTIRLPRDRSPAFALAVHACGDGWARAGVIKDAGDDPDVTHGALVSVTARPGAPGRGVQLRAGPGVGTVRRSGLPVAAGEPAINPGPRGYIEQGIAEAAAALSAPTDVTLELAIEDGERLAAQTLNPRLGIEGGLSVLGTTGLLVPFSCAAWIDAIQRGIDVARAAGIEHVAGSTGRTSEQAVQAYHQLPDEALIDMGDFVGGMLKYLRRYPVPRVTIAGGVAKITKLAQGFLDVHSRRGQADLAALAETAGRLGADATCREVMATANTVAEAFDRAQAAGLPLGDAVAREAQQTALNLIDPACSEVEVLLFDRRGQRVGRAGWARD
What is the function of this protein?
Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
What are the official names of this protein?
Cobalt-precorrin-5B C(1)-methyltransferase, Cobalt-precorrin-6A synthase.
What is the protein family that this protein belongs to?
Belongs to the CbiD family.
Protein: FTN1_HAEIN
Sequence: MLNQIIINKLNDQINLEFYSSNVYLQMSAWCSKHGYEGAATFLLRHADEELEHMQKLFNYVSETSGMPILGKIDAPKHDYSSLREVFEITLEHEKLVTSKINELVEVTFESKDYSTFNFLQWYVAEQHEEEKLFSGIIDRFNLVGEDGKGLFFIDRELATLE
What is the function of this protein?
Iron-storage protein.
What are the official names of this protein?
Probable bacterial non-heme ferritin.
What is the protein family that this protein belongs to?
Belongs to the ferritin family. Prokaryotic subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SFSA_SHIFL
Sequence: MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGSERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL
What is the function of this protein?
Binds to DNA non-specifically.  Could be a regulatory factor involved in maltose metabolism.
What are the official names of this protein?
Sugar fermentation stimulation protein A.
What is the protein family that this protein belongs to?
Belongs to the SfsA family.
Protein: NADD_CALS8
Sequence: MKVAIFGGTFNPIHIGHLIMAQYVKNFSEVDRVIFVPNGVPPHKNVDIALPEDRFEMVKLSIEDNPDFEISDFEIKNKEPSWTINTLNYFATSYEKVYFILGSDNLFEIIKWYRAEEILKKFPIIVLPRERNTTLIRRQIEELGIQFSAKMVLIDMPIIDISSTEIRRLIRENKSIRYMVHPKVEEYIIRKGLYKE
What is the function of this protein?
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
What are the official names of this protein?
Probable nicotinate-nucleotide adenylyltransferase, Deamido-NAD(+) diphosphorylase, Deamido-NAD(+) pyrophosphorylase, Nicotinate mononucleotide adenylyltransferase, NaMN adenylyltransferase.
What is the protein family that this protein belongs to?
Belongs to the NadD family.
Protein: APOC1_FELCA
Sequence: MRLILWLPVLVVVLLMVLEGPAPAQGAPAIASTFSNIPNSLKEFGNNLKDAFESIPEATRKLMTSFAEGLKNLRLPLL
What is the function of this protein?
Inhibitor of lipoprotein binding to the low density lipoprotein (LDL) receptor, LDL receptor-related protein, and very low density lipoprotein (VLDL) receptor.  Associates with high density lipoproteins (HDL) and the triacylglycerol-rich lipoproteins in the plasma and makes up about 10% of the protein of the VLDL and 2% of that of HDL.  Appears to interfere directly with fatty acid uptake and is also the major plasma inhibitor of cholesteryl ester transfer protein (CETP).  Binds free fatty acids and reduces their intracellular esterification.  Modulates the interaction of APOE with beta-migrating VLDL and inhibits binding of beta-VLDL to the LDL receptor-related protein.
What are the official names of this protein?
Apolipoprotein C-I, Apo-CI, ApoC-I, Apolipoprotein C1.
What is the protein family that this protein belongs to?
Belongs to the apolipoprotein C1 family.
What are the subcellular locations of this protein?
Secreted.
Protein: RT15_HUMAN
Sequence: MLRVAWRTLSLIRTRAVTQVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQSRLDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEKICWGLGIEYTFPPLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRRNPDSPAKAIPKTLKDSQ
What are the official names of this protein?
28S ribosomal protein S15, mitochondrial, MRP-S15, S15mt, Mitochondrial small ribosomal subunit protein uS15m.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS15 family.
What are the subcellular locations of this protein?
Mitochondrion.