PharMolix/UniProtQA huggingface dataset:
Protein: RPAA_SYNY3
Sequence: MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEEGGGSPT
What is the function of this protein?
The RpaA regulon is about 300 genes, and includes itself, cikA, sigE, sigG, genes involved in photosynthesis, carbon metabolism in the light and dark, phototaxis, CRISPR arrays 2 and 3 as well as nearly 90 ncRNAs.  Genes are up- or down-regulated in its absence (PubMed:30216574).  Involved in regulation of primary sugar and amino acid metabolism and in adaptation to light changes (PubMed:26379657).  Regulates the accumulation of the monomeric photosystem I and the D1 protein under high light conditions (PubMed:23024802).  Overexpression causes cells to grow more slowly, increases levels of transcripts for clock oscillator genes in the light and the dark, increases levels of SigE protein, increases accumulation of sugar catabolic enzymes in the dark with concomitant decreases in most sugar metabolites (PubMed:26379657).  Plays a role in cell division; overexpression from the psbAII promoter increases expression of some cell-division-related genes, alters cell volume and changes the outer cell membrane and cell wall appearance (PubMed:32173680).
What are the official names of this protein?
DNA-binding dual master transcriptional regulator RpaA, Regulator of phycobilisome-associated protein A, RpaA.
Protein: RL5_CHLPM
Sequence: MAQKKEEAAATPAAPTAARLQTLYHEKVVSALTERFKYDNVMNVPKLKKISINIGVGEAASEPKLLETALQELSQITGQKPQIRKSKKAISNFKLREGQAIGCRVTLRRKAMYEFFDRFVSIAVPRIRDFRGLPDTSFDGRGNYTVGVREQIIFPEIDIDKVPRIQGMDISFVTSATTDEEAFVLLTELGMPFKKKNN
What is the function of this protein?
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.  In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement.  Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
What are the official names of this protein?
50S ribosomal protein L5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
Protein: ALKB1_ALCBS
Sequence: MSENILTEPPRSDADNEGYVDRKRHLWILSVLWPATPIIGLYLVSQTGWSIWYGLVLILWYGLVPLIDTMLGEDYSNPPESVVPKLEQDRYYKVLTYLTVPIHYAALIISAWWVSTQPIGVFEFLALALSLGIVNGLALNTGHELGHKKETFDRWMAKLVLAVVGYGHFFIEHNKGHHRDVATPMDPATSRMGESIYTFSLREIPGAFKRAWGLEEQRLSRCGKSVWSLDNEVLQPMILTVVLYAALLAFFGPLMLIFLPIQMAFGWWQLTSANYIEHYGLLREKLPNGRYEHQKPHHSWNSNHVMSNLILFHLQRHSDHHAHPTRSYQSLRDFSDLPTLPTGYPGMFFVAFFPSWFRSLMDDRVMEWAHGDINKIQIQPGMREFYEQKFGVKGSESPDTTVAK
What is the function of this protein?
Catalyzes the hydroxylation of n-alkanes and fatty acids in the presence of a NADH-rubredoxin reductase and rubredoxin.  It preferably hydroxylases C5-C12 hydrocarbons.
What are the official names of this protein?
Alkane 1-monooxygenase 1, Alkane hydroxylase, AHs, Terminal alkane hydroxylase.
What is the protein family that this protein belongs to?
Belongs to the fatty acid desaturase type 1 family. AlkB subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RIMM_LISW6
Sequence: MYNVGKIVNTHGLIGEIRVIATTDFPEERFQVGNTVYLFEKNSKKPEKLIIRSHRKHKNFDLLMFEGLTGIHQVERMKEGVLKIKETQQTDLEENEFYFHEIIGCTVVTTDGEELGEIIEILTPGANDVWVVKGADKKEKLIPYIADVVKEINTNDKKITIEVMEGLLD
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PIMT_YERPS
Sequence: MVNKRMQTLLMQLRQQGIHDERLLQAIEAVPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQLTPTSRVLEIGTGSGYQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVSTRHGDGWLGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQFQTLKYVQRRNNEYHIETVEAVRFVPLVKGELA
What is the function of this protein?
Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues.  It plays a role in the repair and/or degradation of damaged proteins.
What are the official names of this protein?
Protein-L-isoaspartate O-methyltransferase, L-isoaspartyl protein carboxyl methyltransferase, Protein L-isoaspartyl methyltransferase, Protein-beta-aspartate methyltransferase, PIMT.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1674_STAA9
Sequence: MENFDKTMKFDYEELPTQDVRDVLNNVYRTLDERGYNAVNQIVGYLLSGDPAYIPRQNEARNQIRHIDRDVIMEELVSYYLKEQNK
What are the official names of this protein?
UPF0297 protein SaurJH9_1674.
What is the protein family that this protein belongs to?
Belongs to the UPF0297 family.
Protein: PROA_CROS8
Sequence: MLEQMGQAAKAASYQMALLSSREKNRVLEKIADYLEANAEEILLANEQDLLEARRSGLSEALLDRLALNPQRLHAIANDVRQVCQLADPVGQVIDGGLLESGLRIERRRVPLGVVGVIYEARPNVTVDVASLCLKTGNAAILRGGKETWRTNAATVKVIQKALEECGLPAAAVQAIESPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIFVDETAEFAPALNIITNAKTQRPSTCNTVETLLVHEAIAERFLPELSRAMHERGVTLHADARALALLSGGPATAVAVKPEAFDDEWLSLDLNVKLVAGIDEAIAHIREHGTQHSDAILTRTLRHADRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGYGDDTIRA
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate.  The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
What are the official names of this protein?
Gamma-glutamyl phosphate reductase, GPR, Glutamate-5-semialdehyde dehydrogenase, Glutamyl-gamma-semialdehyde dehydrogenase, GSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the gamma-glutamyl phosphate reductase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CG1C_SCHPO
Sequence: MSEVIKSVPPGSQNTSQWIISKDQLVFTPSALDGIPLDQEEIQRSKGCNFIINVGLRLKLPQTALATANIYFHRFYLRFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQKNSNVLVDEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFVADDKNVTKVAWTYINDSTRSIACLLYSPKTIAAAAFQFALEKNEINLSTTTDGLPVWMEESQVSYEDVKGVLTLIDSLYKKINPSKQALPIDQKNGSHASSVAPGTPSSLASVSTQATPQHQNSSGRTDSFHSLNTETPSKSTVDDQILSTAAQPKKSSDTDKEMETEAS
What is the function of this protein?
Essential for progression through the whole cell cycle.
What are the official names of this protein?
Cyclin pch1, Pombe cyclin C homolog 1.
What is the protein family that this protein belongs to?
Belongs to the cyclin family. Cyclin C subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL30E_SULTO
Sequence: MAEVTGFESELKTLLRTGKVVFGSKKTIKMVKTGKVKMVIIASTLRQDLKDDILAYAKISNIPVYQYNGSAYELGTLCGKPFMISTIGVIDPGESRLLEEIKEGAQ
What are the official names of this protein?
50S ribosomal protein L30e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL30 family.
Protein: RL17_ECOHS
Sequence: MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAAAE
What are the official names of this protein?
50S ribosomal protein L17.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL17 family.
Protein: APAG_DEIRA
Sequence: MTSSPDITVSVQVHHLPAQSTPQRQLFAYFITIENNTDDSWKLLSRHWTITSGDGQQFTVEGEGVVGEQPLLAPGAQYTYNSFVTVDALPGRMEGHYVMGDAWGQTAQVPIPPFRLDIAPESGERLLN
What are the official names of this protein?
Protein ApaG.
Protein: NODY1_HYPPI
Sequence: MASTGVSVIVVGLGLAGLTTAIECHQKGHSVIALERSKDLNYVGKIIDDTVMIDNNAGVIVSKWGNGAVGQALNAWKFNNTQASVYDTTGKQVQTIEVRKPSSNKYLILRRELTKIVYDHAKTLGIDMRFGTEISDYWEESDQAGVSANGQKLQADCIIWADGVNSKGRDSVAGSSLKPTHSGYAHIRGRADIASLKGNPDAQWILQGAGEVDQMIFVPGPTACLTIVTCGGGRNVAFSNMYKVESPNSAKTSSTPATAQDFLKPIQSWPFKANIEAVVQAAPSGSLVDEPVLQLGQLPSWVSPQGRMILIGDASHPSALNSPIGESLVIEDAAVVAICLELAGKGNVPLALRVAEKIRYVKQSNNNKNIPRASALQHNVEQPDQGINMYPEVPLRDWVSEHNSQEHAYEEYDKVVKAIRGGKEYVATNIS
What is the function of this protein?
FAD-dependent monooxygenase; part of the gene cluster that mediates the biosynthesis of the indole diterpenes nodulisporic acids (NA).  Nodulisporic acid A (NAA) and its chemically modified derivatives are of particular significance because of their highly potent insecticidal activity against blood-feeding arthropods and lack of observable adverse effects on mammals, in particular the tremogenicity associated with the paspaline-derived IDTs is not observed (PubMed:29283570).  The geranylgeranyl diphosphate (GGPP) synthase ggs1, localized outside of the cluster, is proposed to catalyze the first step in nodulisporic acid biosynthesis via conversion of farnesyl pyrophosphate and isopentyl pyrophosphate into geranylgeranyl pyrophosphate (GGPP) (PubMed:29283570).  Condensation of indole-3-glycerol phosphate with GGPP by the prenyl transferase nodC then forms 3-geranylgeranylindole (3-GGI) (PubMed:29283570).  Epoxidation by the FAD-dependent monooxygenase nodM leads to a single-epoxidized-GGI that is substrate of the terpene cyclase nodB for cyclization to yield emindole SB (PubMed:29283570).  The terminal methyl carbon, C28, of emindole SB is then oxidized by the cytochrome P450 monooxygenase nodW to produce nodulisporic acid F (NAF), the pentacyclic core of NAA (PubMed:29283570).  NAF is converted to nodulisporic acid E (NAE) via prenylation.  This step is probably performed by one of the indole diterpene prenyltransferases nodD1 or nodD2 (Probable).  Several oxidation steps performed by the FAD-linked oxidoreductase nodO and one of the cytochrome P450 monooxygenase nodR, nodX or nodZ further convert NAE to nodulisporic acid D (NAD) (Probable).  NAD is substrate of cytochrome P450 monooxygenase nodJ to produce the precursor of nodulisporic acid C (NAC), converted to NAC by one of the indole diterpene prenyltransferases nodD1 or nodD2 (Probable).  The FAD-dependent monooxygenase nodY2 then oxidizes NAC to nodulisporic acid B (NAB) (Probable).  Finally NAB is converted to NAA by one of the cytochrome P450 monooxygenases nodR, nodX or nodZ (Probable).
What are the official names of this protein?
FAD-dependent monooxygenase nodY1, Nodulisporic acid biosynthesis cluster protein Y1.
What is the protein family that this protein belongs to?
Belongs to the paxM FAD-dependent monooxygenase family.
Protein: AROK_CHLMU
Sequence: MPTFDTTKQIFLCGLPSVGKTSFGRLLAQFLSLPFFDTDHLLSARFHGDSPKAIYQRFGEEGFCQEELLTLINLPVIPSVVALGGKTLLDKQIYEHITQRENILLVLLDLPFATLYQRLQKKPLPESLKNTPSLENALFQRLEKLRLLTPHIFSLQAATSLHEIGEVCQSFCLQFLTAQEIPYA
What is the function of this protein?
Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.
What are the official names of this protein?
Shikimate kinase, SK.
What is the protein family that this protein belongs to?
Belongs to the shikimate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CYB_MYOSH
Sequence: MTITRKKHPLFKIINHSFINLPTPSNISSWWNFGSLLGLCLMVQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGIYYGSYNMIETWNVGIVLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSTLVEWIWGGFSVDKPTLTRFFAFHFILPFIITALVLVHLLFLHETGSTNPTGLNSDADKIPFHPYYTIKDLLGALLLLSALMILVLFFPDALGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILALMPILHTSKQRTLVFRPITQTVYWILVADLLILTWIGGQPVEYPFAIIGQAASIAYFSIIVILMPIAGIIENDIMDLN
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: RNH2_ACHLI
Sequence: MTIDNLAFEKALYDKGYTYICGVDEAGRGPLAGPVVAAAVIFEKGFYHEDINDSKTLSAKKRETLFELIKQHALAIGVSVVNHEVIDKINILEAARHAMEDAISKLKIKPQYALTDHMDIKGIPYTSIKHGDQLSISIAAASIIAKVTRDKLMVDYDEVYPQYGFKDHKGYGTRKHLEALNLYGVSPIHRKTFAPVAKLLKQ
What is the function of this protein?
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
What are the official names of this protein?
Ribonuclease HII, RNase HII.
What is the protein family that this protein belongs to?
Belongs to the RNase HII family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYFB_RUEPO
Sequence: MKFTLSWLKDHLDTTASVDEIAEALTDLGLEVEGIENPAARLAGFTLAHVKSASQHPDADRLRVCVVETNEGEKQIVCGAPNAREGITVVLAKPGDYVPGIDVTLSVGNIRGVESHGMMCSERELELSDEHDGIIELPSGEVGERFIDWLAENDPAKVDPVIEIAITPNRPDALGVAGIARDLAARGIGTLKTRAYAPVPGDFDCPIKVTIDEDTRDGCPLFTGRLIRDVRNGPSPQWLQDQLRAIGLRPISALVDITNYMTYDHNRPLHVFDADKVKGNLRVHRAAGGETLKALDEKEYTFQPGMMVISDDEGAESIAGIMGGDATGCTEETVNVFLESAYWDNVQIALAGRALKINSDARYRFERGVDPAYTLEGLEHATQMILDICGGEASTVVIAGAVPDHSRAYKLDAERVRSLVGMDIPESEQRQTLTRLGFRLEGNMAHVPSWRPDVQGEADLVEEVARIASLTKLVGRPLPRLTDGVPKPVMTPQQRRLSMARRTAASLGYNECVSYTFIDQASAALFGGGTDATMLENPISSEMSHMRPDLLPGLLAAAARNQARGFADLALFEAGPVFHGGEPGEQRAQIAGLLVGRTGPKDVHGAARAVDLYDAKADAEAVLAAMGAPAKVQILRDGDGWWHPGRHGRICLGPKKVLGVFGELHPRVLQAMDVKGPAVAFVLWPEEVPLPRKSGTTRAALALRDLQAVERDFAFVVDAGVEALTLVNAAAGADKALIEDVRVFDEFIGGSLGEGKKSLAITVRLQPTETTLKEKDIEAVSAKIVEKVAKATGGTLRG
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DNLJ_CORDI
Sequence: MTDNFADLRRQWDDLAEQVRHHRDAYYNHTPEISDAEFDQLFRQLQQLEQEHPELAVPESPTLRVGAPVEQSSFDNVEHLERMLSLDNVFDAAELDDWLQRTPSATYLTELKIDGLSIDLVYRSGRLERAATRGDGRVGEDVTANAKVIEDIPHRLQHSDAYPVPELVEIRGEVFIAVEDFALVNEQRQKEGGKPFANPRNAAAGSLRQKDTEAVRKRRLKMICHGIGASEGFEADTQFDAYKALEAWGLPVSPYTKRVHSAQEVQERVTYWAQHRHDATHEMDGLVIKIDSFAEQRALGSTARAPRWAIAYKYPPEEVTTKLLDIQVGVGRTGRVTPFAVMDPVFVAGSTVEMATLHNQTEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVEKRDGSEREFIFPTLCPACGTRLAPQKEDDADWRCPNSQSCPAQLSSRLTYLAGRGAFDIEALGEKGAEDLIASGVLIDEAQLFNLTEDDLKRTKVYTTKAGALNATGEKLLANLESAKHTDLWRVLVALSIRHVGPTAARALAVRYRSLEALRAADVEDIANTEGVGAIIAQSFAQWFDVPWHRNIVEVWADAGVTMADSEADIPDQVLEGLTIVVTGSLVDFSRDSAKEAIVSRGGKASGSVSKKTSYVVVGENAGSKETKARDLGLRILNEDEFKQLLANGTV
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
Protein: RL22_PROM0
Sequence: MTTTPETQKTAVAHGNYVRGSASKVRRVLDQIRGRSYRDALIMLEFMPYRSTDPITKVLRSAVANAEHNLGMDPSTLVISSAWANSGPVMKRYRPRAQGRAFSIKKQTCHISISVESAPTQTNAEVQN
What is the function of this protein?
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L22.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: YGFB_ECO57
Sequence: MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDSSWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH
What are the official names of this protein?
UPF0149 protein YgfB.
What is the protein family that this protein belongs to?
Belongs to the UPF0149 family.
Protein: Y042_THEAC
Sequence: MIGGRDDYPESGFSLPFEPGPRRMQIKRGIRILGIDDSPFSRGDRESNLVGVLMRMDGYVEMMEKEKIQVDGDDVNRAIENLFLYTGRVARIIMMSGISFAGFNICDIDALYQRIRVPVISVFEQGGSVERMIAAIEKHLDDPEKVRILRSLKPVEIRNNGYIIMANLSGIDAQSAQEIITRNTIRGKFPEAIRLADLVGKILGR
What are the official names of this protein?
UPF0215 protein Ta0042.
What is the protein family that this protein belongs to?
Belongs to the UPF0215 family.
Protein: HSLU_BRUME
Sequence: MSNFSPREIVSELDRFIIGQKDAKRAVAIALRNRWRRQQLEGQMREEVMPKNILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRDLVEIAITLVREKRREDVKAKAHLNAEERVLDALVGKTASPVTRDSFRKKLRNGEMDDKEIEIEVSDSGASPNFEIPGMPGANIGVLNISDMLGKAMGGRTKTRKTTVKDSYPILINDESDKLLDQDQIVQEALRVSEDEGIVFIDEIDKIAAREGGSGAGVSREGVQRDLLPLVEGTTVATKYGPVKTDHILFITSGAFHVSKPSDLLPELQGRLPIRVELSALTREDFRRILTETEASLIKQYIALMETEEVKLEFSDDAIDALADIAVDLNATVENIGARRLQTVMEKVLDEISFTAPDKAGATFIIDAAYVKEKIGGLAKNTDLSRFIL
What is the function of this protein?
ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity.  The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV.  HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
What are the official names of this protein?
ATP-dependent protease ATPase subunit HslU, Unfoldase HslU.
What is the protein family that this protein belongs to?
Belongs to the ClpX chaperone family. HslU subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LEPA_RICCK
Sequence: MNNQKYIRNFSIIAHIDHGKSTLADRLIEHCGGFQAREMSKQVLDSMDIEKERGITIKAQTVKLLYKAKDGNTYYLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDSTQGVEAQTLANVYKAIENNHEIVPVLNKIDLPASEPEHVKQQIEDIIGIDASEALLISAKSGIGIDLVLEAIVNKLPPPKESSDDILKALLVDSWYDPYLGVVILVRIIDGALRKNMRIKMMATNSVYKVEHVGYFTPKKHIADVLYAGEIGFFTASIKQVADCKVGDTITDEKKPCEQALPGFKPNLPVVFCGFYPTDSSEFEYLKDSLAKLHLNDSSFEYEMESSSALGVGFRCGFLGLLHLEIIQERLSREFDLDLITTAPSVIYKIYMRDGESLEIYNPADLPNLQKIESIEEPWIKAIIIVPDEFLGAVLSLCTEKRGVQLDHSYIANRARIVYKLPLNEIVYDFYDRLKSCSKGYASFEWQMDVYAPSELVKLGILVNGKAVDALSTIVHRSRAEQTGRALCVRLKDLIPIQQIDIVIQASIGSRIIARETIKALRKDVLSKCYGGDITRKRKLLEKQKIGKKRMRQYGNIEIPQSAFIAALKIGDE
What is the function of this protein?
Required for accurate and efficient protein synthesis under certain stress conditions.  May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.  Back-translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly.  Binds to ribosomes in a GTP-dependent manner.
What are the official names of this protein?
Elongation factor 4, EF-4, Ribosomal back-translocase LepA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: DTD_FERNB
Sequence: MRAVVQRVTKASVSVDGKIVGQIEKGIVVLLGVGKDDNIDDTKYLAEKIVNLRIFDDNDGKMNLSLLDVQGSALIISQFTLYGDCRRGRRPSYSDSANPELAKELYEKFIELVRGYGVHVETGIFAAYMQVEIHNDGPVTLLLDSKKVF
What is the function of this protein?
An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs.  Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS.  Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site.  By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality.
What are the official names of this protein?
D-aminoacyl-tRNA deacylase, DTD, Gly-tRNA(Ala) deacylase.
What is the protein family that this protein belongs to?
Belongs to the DTD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RHAA_SALPK
Sequence: MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVAGFENPEGSLTGGIQSTGNYPGKARNATELRADLEQALRLIPGPKRLNLHAIYLESDTPVARDQIKPEHFKNWVEWAKANRLGLDFNPTCFSHPLSADGFTLSHPDAKIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLEALDEVISEKFDPAHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPRLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHNLFDRVHIGLDFFDASINRVAAWVIGTRNMKKALLRALLEPTDQLRQLEASGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSQWLDSVRAYEKEILSKRS
What is the function of this protein?
Catalyzes the interconversion of L-rhamnose and L-rhamnulose.
What are the official names of this protein?
L-rhamnose isomerase.
What is the protein family that this protein belongs to?
Belongs to the rhamnose isomerase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HTPG_SHIDS
Sequence: MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRSLSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKCEEKDGETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLSLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
What is the function of this protein?
Molecular chaperone.  Has ATPase activity.
What are the official names of this protein?
Chaperone protein HtpG, Heat shock protein HtpG, High temperature protein G.
What is the protein family that this protein belongs to?
Belongs to the heat shock protein 90 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1436_AQUAE
Sequence: MNRGMTLIELLVALALSIILSLGLYYSFRYSGIFFSQDKAISDLIEYARTAEEQLKFYFDRWGNGVPEGGTDCTYSFPNGYPKNRFCIIKGSSGNCDEIIFYGNTQGFLIVLDEKDEDEFNALACRMTNDEDDYYYIWKEDKPVDTTTGNRIGVSGGDCGIKGIIPNASVAKEINTLDKGTVTLQTGDAIIRVPKIIKIYCSETNGELYLKVSEQEANKAPVESPLVPVKEMEATLLPEGCDPTNGECTAVRFRITFVNRVGNEEYTLTKDIVLGR
What are the official names of this protein?
Uncharacterized protein aq_1436.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.