PharMolix/UniProtQA huggingface dataset:
Protein: FPG_PARPJ
Sequence: MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGHVVRKVERRGKYLLFEIDAGWFIVHLGMTGTLRVLRHVPHPPAAAKHDHIDWIFDEFILRYRDPRRFGAVLWHPREAGDVLEHPLLASLGVEPFSPAFSGALMHRLTRGRKVSVKQALLAGEIVVGVGNIYASESLFRAGIRPTTAAGRVSLVRYELLADAVRVTLAAAIEKGGSTLRDFVGSNGESGYFQLDYFVYDRAGLPCRVCGTPIKQIVQGQRSTYFCPTCQR
What is the function of this protein?
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents.  Acts as DNA glycosylase that recognizes and removes damaged bases.  Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG).  Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand.  Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
What are the official names of this protein?
Formamidopyrimidine-DNA glycosylase, Fapy-DNA glycosylase, DNA-(apurinic or apyrimidinic site) lyase MutM, AP lyase MutM.
What is the protein family that this protein belongs to?
Belongs to the FPG family.
Protein: OTCC_CLOPE
Sequence: MAVNLKGRSFLTLKDFTPAEIRYLLDLSHDLKAKKRAGILGDSLKGKNVVLLFEKTSTRTRCAFECGAAEEGAHVTFLTNSQMGKKESIEDTAKVLGRMYDGIEFRGFKQSTVEELAKHAGVPVWNGLTDADHPTQILADFLTIEEHAHKPLSEIKLVFTGDTRNNMSYALMYGAAKMGMHFVALGPDSLKPDEDILKEMQEYSKETGATIEFSSNVDEAVKGADVIYTDIWVSMGEDESLYPERVKLLTPYKVTREMMNKTGNKNTLFMHCLPSFHDEDTEVCKDMMDRLGLDIREVEDEVFRSKNSVVFDEAENRMHTIKAVMVATAGR
What is the function of this protein?
Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
What are the official names of this protein?
Ornithine carbamoyltransferase, catabolic, OTCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LCGB_LACLL
Sequence: KKWGWLAWVDPAYEFIKGFGKGAIKEGNKDKWKNI
What is the function of this protein?
Kills Lactococci.
What are the official names of this protein?
Bacteriocin lactococcin-G subunit beta.
Protein: RPIA_SYNP2
Sequence: MDAVTVMKQEVGKVAAALVQSNSVVGLGTGSTTAYAIQYIGERLAAGELENIVGIPTSFQAEVLAKQYKIPLSSLDAVDHIDVAIDGADEVDPQKNLIKGGGAAHTREKVVDALANKFVVVVDSGKLVDRLGSTFLLPVEVIPMAITPVMRQLEALGGKPELRMGVKKAGPVVTDEGNLVVDLKFAGIDDPATLEQKINNIPGVLENGLFVGVADVILVGEIIDGQPRVREIQ
What is the function of this protein?
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
What are the official names of this protein?
Ribose-5-phosphate isomerase A, Phosphoriboisomerase A, PRI.
What is the protein family that this protein belongs to?
Belongs to the ribose 5-phosphate isomerase family.
Protein: PROA_MYCBO
Sequence: MTVPAPSQLDLRQEVHDAARRARVAARRLASLPTTVKDRALHAAADELLAHRDQILAANAEDLNAAREADTPAAMLDRLSLNPQRVDGIAAGLRQVAGLRDPVGEVLRGYTLPNGLQLRQQRVPLGVVGMIYEGRPNVTVDAFGLTLKSGNAALLRGSSSAAKSNEALVAVLRTALVGLELPADAVQLLSAADRATVTHLIQARGLVDVVIPRGGAGLIEAVVRDAQVPTIETGVGNCHVYVHQAADLDVAERILLNSKTRRPSVCNAAETLLVDAAIAETALPRLLAALQHAGVTVHLDPDEADLRREYLSLDIAVAVVDGVDAAIAHINEYGTGHTEAIVTTNLDAAQRFTEQIDAAAVMVNASTAFTDGEQFGFGAEIGISTQKLHARGPMGLPELTSTKWIAWGAGHTRPA
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate.  The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.
What are the official names of this protein?
Gamma-glutamyl phosphate reductase, GPR, Glutamate-5-semialdehyde dehydrogenase, Glutamyl-gamma-semialdehyde dehydrogenase, GSA dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the gamma-glutamyl phosphate reductase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PSAK1_NOSS1
Sequence: MLTSTLLAAATTPLEWSPTVGIIMVIANVIAITFGRQTIKYPSAEPALPSAKFFGGFGAPALLATTAFGHILGVGLVLGLHNLGRI
What are the official names of this protein?
Photosystem I reaction center subunit PsaK 1, Photosystem I subunit X 1.
What is the protein family that this protein belongs to?
Belongs to the PsaG/PsaK family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Multi-pass membrane protein.
Protein: TIG_VIBC1
Sequence: MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGKAVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVENNEGADLVFTATFEVYPEVELKGLDSITVEKPTTEVNDSDVEEMIETLRKQQATWAEVEEAAEAGKRVSIDFVGSIDGEEFEGGKAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVNFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVSKFGVAEGGVEALKAEVRKNMERELKQAVKNRIKEQAIDGLVEQNEIDVPAALIDQEIQVLRQQAAQRFGGNPEAAAQLPRELFEEQAKRRVVVGLLLGEVIKSEELKADDEKVKALIEEMATAYEDPSEVIAYYEQNEQMMNNMRNVALEEQAIDAIIAKAQVSEKEVSFNELLNQQQPAA
What is the function of this protein?
Involved in protein export.  Acts as a chaperone by maintaining the newly synthesized protein in an open conformation.  Functions as a peptidyl-prolyl cis-trans isomerase.
What are the official names of this protein?
Trigger factor, TF, PPIase.
What is the protein family that this protein belongs to?
Belongs to the FKBP-type PPIase family. Tig subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm.
Protein: COAX_PSEPK
Sequence: MILELDCGNSFIKWRVIHVADAVIEGGGIVDSDQALVAEVAALASVRLTGCRIVSVRSEEETDALCALIAQAFAVQAKVAHPVREMAGVRNGYDDYQRLGMDRWLAALGAFHLAKGACLVIDLGTAAKADFVSADGEHLGGYICPGMPLMRSQLRTHTRRIRYDDASAERALSSLSPGRSTVEAVERGCVLMLQGFAYTQLEQARVLWGEEFTVFLTGGDAPLVRAALPQARVVPDLVFVGLAMACPLD
What is the function of this protein?
Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
What are the official names of this protein?
Type III pantothenate kinase, PanK-III, Pantothenic acid kinase.
What is the protein family that this protein belongs to?
Belongs to the type III pantothenate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CYB_BRARM
Sequence: MTNIRKSHPLLKIINHSFIDLPTPSNISSWWNFGSLLGICLILQIITGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFIHVGRGMYYGSYTFMETWNIGIILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPSGLNSDSDKIPFHPYYTMKDLLGMILLILALALLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILALLPFLHTSKQRSLMFRPITQTLYWVLVADLFTLTWIGGQPVEHPFVIIGQLASILYFSIILILMPISGHIENKILKLN
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: DEOC_VIBPA
Sequence: MSDLKAAALRALKLMDLTTLNDDDTDAKVISLCHDAKTAVGNTAAICIYPRFIPIAKKTLREQGTPEVRIATVTNFPHGNDDIDIAVAETKAAVAYGADEVDVVFPYRALMAGDEKVGFELVKQCKEACGDILLKVIIETGELKEEALIKKASQICIEAGADFIKTSTGKVPVNATPEYARMMLEVIRDMGVAETVGFKPAGGVRTAEDAAAYLAMADEILGDNWVDARHYRFGASSLLTNLLNTLEVSDDVADPTAY
What is the function of this protein?
Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.
What are the official names of this protein?
Deoxyribose-phosphate aldolase, DERA, 2-deoxy-D-ribose 5-phosphate aldolase, Phosphodeoxyriboaldolase, Deoxyriboaldolase.
What is the protein family that this protein belongs to?
Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NCS1_LYMST
Sequence: MGKRASKLRPEEVDELKAHTYFTESEIKQWHKGFRKDCPDGKLTLEGFTKIYQQFFPFGDPSKFANFVFNVFDENKDGFISFSEFLQALSVTSRGTVEEKLKWAFRLYDLDNDGYITRDELLDIVDAIYRMVGESVTLPEEENTPEKRVNRIFQVMDKNKDDQLTFEEFLEGSKEDPTIIQALTLCDSGQA
What is the function of this protein?
Neuronal calcium sensor, regulator of G protein-coupled receptor phosphorylation in a calcium dependent manner (By similarity).  Regulates neurite extension and branching by activity-dependent Ca(2+) influx in growth cones.
What are the official names of this protein?
Neuronal calcium sensor 1, NCS-1.
What is the protein family that this protein belongs to?
Belongs to the recoverin family.
What are the subcellular locations of this protein?
Perikaryon. Cell projection. Cell projection, growth cone. Note=In pedal neurons, higher expression in secondary neurites, perikarya, growth cones and branch points than in primary neurites.
Protein: MINE_SALPC
Sequence: MALLDFFLSRKKSTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEESK
What is the function of this protein?
Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites.  This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
What are the official names of this protein?
Cell division topological specificity factor.
What is the protein family that this protein belongs to?
Belongs to the MinE family.
Protein: ZN234_HUMAN
Sequence: MTTFKEGLTFKDVAVVFTEEELGLLDPVQRNLYQDVMLENFRNLLSVGHHPFKHDVFLLEKEKKLDIMKTATQRKGKSADKIQSEVETVPEAGRHEELYWGQIWKQIASDLIKYEDSMISISRFPRQGDLSCQVRAGLYTTHTGQKFYQCDEYKKSFTDVFNFDLHQQLHSGEKSHTCDECGKSFCYISALHIHQRVHMGEKCYKCDVCGKEFSQSSHLQTHQRVHTVEKPFKCVECGKGFSRRSTLTVHCKLHSGEKPYNCEECGRAFIHASHLQEHQRIHTGEKPFKCDTCGKNFRRRSALNNHCMVHTGEKPYKCEDCGKCFTCSSNLRIHQRVHTGEKPYKCEECGKCFIQPSQFQAHRRIHTGEKPYVCKVCGKGFIYSSSFQAHQGVHTGEKPYKCNECGKSFRMKIHYQVHLVVHTGEKPYKCEVCGKAFRQSSYLKIHLKAHSVQKPFKCEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECGKVFSQASHLLTHQRVHSGEKPFKCEECGKSFSRSAHLQAHQKVHTGEKPYKCGECGKGFKWSLNLDMHQRVHTGEKPYTCGECGKHFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQLQYHRRVHTGEKPYKCEICGKRFSWRSNLVSHHKIHAAGTFYENDENSKNIRELSEGGSSTR
What is the function of this protein?
May be involved in transcriptional regulation.
What are the official names of this protein?
Zinc finger protein 234, Zinc finger protein 269, Zinc finger protein HZF4.
What is the protein family that this protein belongs to?
Belongs to the krueppel C2H2-type zinc-finger protein family.
What are the subcellular locations of this protein?
Nucleus.
Protein: RS2_POLSJ
Sequence: MSTSMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLSANRGTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAGLDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPLIGVVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRANAVNDVVKAVSAESSDEFVEVENAAN
What are the official names of this protein?
30S ribosomal protein S2.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS2 family.
Protein: MNTC_BACSU
Sequence: MFESLWLQLQHPNTQWVLAGTLLLGTASGVLGSFVLLRKQSLIGDAMAHSALPGVCLAFLFTGQKSLPFFLLGAALAGLLGTFCIQLIPRLSKTKEDSAIGIVLSVFFGVGIILLTYIQQQGAGSQSGLDSFLFGQAASLVRQDIILIAGISAVLLLLCIVFFKEFTLITFDLAFAKGLGIPVRFLNGLLACLIVCAVVIGLQTVGVILMAAMLITPAITARYWTERLTGMIIIAGITGGVSGVAGTLLSTTMKGMATGPLMILSATLLFLFSMICAPKRGLAAKAIRLMRLRRRTSREQVLLAIYEQYEKNNLCVTVESVRKKRRLSPSLCLKALNDLEQERCIERIENGIWQITSKGIEKGYHTALKQRMYEVYLMHEMELANIESDQDYFDPDRLPRETRERLYSLLKLYGRMPERRKASHDAEKGQIANEF
What is the function of this protein?
Probably part of the ABC transporter complex MntABCD involved in manganese import.  Probably responsible for the translocation of the substrate across the membrane.
What are the official names of this protein?
Manganese transport system membrane protein MntC.
What is the protein family that this protein belongs to?
Belongs to the ABC-3 integral membrane protein family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: EX7L_SINFN
Sequence: MTSFFDSDSSSNVAEYSVSELSGSIKRTLEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRARMEAVIWKGTFARLKLRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALLEERKRKLAAEGLFDAARKRPLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVVVWPVRVQGDGASEEVAAAIRGFNALEEGGPIPRPDVLIVARGGGSLEDLWGFNDEAVVRAVAASGIPLISAVGHETDWTLIDYASDQRAPTPTGAAEMAVPVKADLEAQVANLSARLQAAATRQMDHRRHALRALARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERIAAHLRPELLTTRIREQRRHLLEAINKAERCVERQIDRRQARVSAADASLRTLPSRLAGQIHRSSDRVSGLGRRADAAMAAEMRRLKGALAAQDRVLQSLSYRNVLQRGFALVRDAAGDPVKQAAAVTAGMALSLEFADGRVSAVAGEEGAPPPAAPKKRASRPVVPTKQGSLF
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 large subunit, Exodeoxyribonuclease VII large subunit, Exonuclease VII large subunit.
What is the protein family that this protein belongs to?
Belongs to the XseA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FLH3_CAEEL
Sequence: MNLASQISQAKTGNATMEWAKNYVSKLNDGQLALLQKMYADHQAKLKASEDEKKKKEMEELKMKAQQQAILDSLTQQIPIMVDVLRSSTSPDSQPSSSSSVMSSTDEDQITVKDVLIGKINKAQRQSSPNSSKPYTPRGIRERVLFDEHLYVFDKCSYDSKKRFFRCERKNTCPARIHTPFDAERVIHKVQVHNHPPPTTFDLAHYNIDYGKVKSGHILSLNGPQQTKNLLPPSLLTPKSDLEDETLSTKTEQKNASTMNILLSMTNNCDGRKPITLRLPDLFNKISEMEIHDMEMTLTKFLLENRELRTDLISRNGDLPVFFPNAHNDELVLFVADQHENDSVFQMIRVSERNEKSIRQAIQEHLQKVSNRSLMMNISSKINVPLSQQMIDQWRTEEFIRLDSSKPNFWKIHHVSKLQD
What is the function of this protein?
Probable transcription factor (PubMed:18794349).  May bind to the promoters of target genes, including micro-RNA genes, in order to repress expression, and acting redundantly with flh-2 (PubMed:18794349).
What are the official names of this protein?
FLYWCH transcription factor 3.
Protein: RS6_METFK
Sequence: MRHYEIVFIVHPDQSEQVPAMIERYRTLVTSNGGTIHRLEDWGRRQLAYPIQKIHKAHYVLMNIEVSQEVLNELEHAFKFNDAVLRHLTLNTDEAVTAPSPMMKEEKSKSLLAKDEAAAPAPAPATEQATA
What is the function of this protein?
Binds together with S18 to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S6.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS6 family.
Protein: RUVA_ANADF
Sequence: MIARLAGKVAEKGADHVVLDVGGVGYLVHLSAVSLAGLPPQGGDGTLRIFTNVRQDAIELYGFASEDEEAVFRALIDVKGVGPRAAQNILSGIDARELAQAVAGSDVARLTKVPGIGKKTAERLVVELKEKLALLARAAGPARAKPGAGVVEQLRQALVNLGYKPPQADAAADALRDEAEGKKLDELLREALKRLRG
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: RIMM_THEP3
Sequence: MADYYNVGKVTSAHGIKGEVKVYPLTNVPERFYDLEYVWIFDDQQRPHKYDIEYVKIISKGVCVKLKGIDTRGDAEKLKGAFLKVDSQNALELEENEYFIKDLVGMKVYTEEGSFLGTLVEVLKTGANDVYVIKTEEREILIPAIKEVVKKVDVDNKVMVVHLLEGL
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TIM44_SCHPO
Sequence: MFLSRKITKNARTIVQCQRFFQTSIFSQNAAPQSPIKVFMDTFRAELKKSQELQDSVKALQDSSGSLSESDTFKKARDAYEKARSGTTAASSFTGKTVGKAGAKIGSYAQKAWESAPVQLSKKVISSTANTVATGVDTATKPVRETAFYKTIKQTMSDGSTSSRYGFYADKEQRKKLREEFERRNRMFASSARIQPNEDVQSVVVHSNPSWKNKVEQIKNESRLVRKIQELKKSYQESEHPIVSSIRDMADSISGVWSRMFSETEASQVMRRFKEIDPSFNTEHFLQYLREYIVPEVTEAYVKGDKEVLKTWLSEAPFSVYETTTKEYAKHGVVSVGKILDIRGVDIMSQRLLQPNDIPVFIVTFRTQEVHMFKDASSGELVAGKDDRIQQCTYASVFTRVEDELDNPETRGWRIVDFARARAVDYF
What is the function of this protein?
Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.  Recruits mitochondrial HSP70 and its co-chaperone (mge1) to drive protein translocation into the matrix using ATP as an energy source.
What are the official names of this protein?
Mitochondrial import inner membrane translocase subunit tim44.
What is the protein family that this protein belongs to?
Belongs to the Tim44 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein.
Protein: CSRA_HAEIE
Sequence: MLILTRKVGESVLIGDDISITVLSVRGNQVKLGVEAPKEVSVHREEIYQRIKQTKDEPYLASS
What is the function of this protein?
A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability.  Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems.  Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA.  Its function is antagonized by small RNA(s).
What are the official names of this protein?
Translational regulator CsrA, Carbon storage regulator.
What is the protein family that this protein belongs to?
Belongs to the CsrA/RsmA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CLIP4_RAT
Sequence: MTIEDLPDIPLEGSSLIGRYPFLFTGSDTSVIFSISAAPMPSDCEFSFFDPNDASCQEILFDPKTSVSELFAILRQWVPQVQQNIDIIGNEILKRGCNVNDRDGLTDMTLLHYTCKSGAHGIGDVETAVKFAAQLIDLGADASLRSRWTNMNALHYASYFDVPELIRVLLKTSKPKDVDATCSDFNFGTALHIAAHNLCAGAVKTLLELGANPAFRNDKGQIPADVVPDPVDMPLEMADAAAIAKEIKQMLLDSMPLPCTITKATLPNCDITTSKAMLTTLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKYGIFAPLSKITKVKDGRKNITHTPSTKATLHARSQKVDVAHVTSKVNSGLMTSKKENASESTLSLPRSEELKTVAKNDATQPGCISSSSSTSSLDHKQSHPKKLSTSSSSGKKTLSKSPSLPSRASAGLKSSTTSAANNTHREGALRLGERVLVVGQRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRLSDSLDTLSEISSNKQNHSYPGFRRSFSTTSASSQKEINRRNAFAK
What are the official names of this protein?
CAP-Gly domain-containing linker protein 4, Restin-like protein 2.
Protein: CPPA_NEIGO
Sequence: MITENERDRRTAAWLIETYGAEAVAEAETRIAGARKPYPSNIAKVLGASLPEALKRTENAAARQKLAGLRRMLDGKAVKTSQDL
What are the official names of this protein?
Cryptic plasmid protein A.
Protein: RL29_HELMI
Sequence: MKAKELHDLSTEELQKKLIDFKDELFRLRFQLATQQLENPMRIRDVRKNIARTQTVLRQRELEAQKA
What are the official names of this protein?
50S ribosomal protein L29.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL29 family.
Protein: RS9_CHLTE
Sequence: MKEVIDTVGRRKTSVARVFMSPGKGKIVVNKLPVEEYFKDEFKRSQALKPLAVAEKQNDFDITINVKGGGLTGQSGAVSLAIARALVEFDESIRAALRPDRLLTRDPRMVERKKYGKKKARKSFQFSKR
What are the official names of this protein?
30S ribosomal protein S9.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS9 family.
Protein: SECB_HAES1
Sequence: MTEKNQDAVTEEQGTEVVLQIQRIYVKDVSFEAPNLPHIFQQEWKPKLDFNLSTETTHLAEDLYEVCLNISVETTMEGSEDVAFICEVKQAGIFAISGLEDVQLAHCLTSQCPNMLFPYARELISSLVNRGTFPALNLAPVNFDALFVEYMQRQQAQEESKAEEKEKKEVH
What is the function of this protein?
One of the proteins required for the normal export of preproteins out of the cell cytoplasm.  It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state.  It also specifically binds to its receptor SecA.
What are the official names of this protein?
Protein-export protein SecB.
What is the protein family that this protein belongs to?
Belongs to the SecB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KRP4_ORYSJ
Sequence: MGKYMRKAKVVVSGEVVAAAVMELAAAPLGVRTRARSLALQKRQGGEYLELRSRRLEKLPPPPPPPPRRRATAAAATADATAAESAEAEVSFGGENVLELEAMERNTRETTPCSLIRDPDTISTPGSTTRRSHSSSHCKVQTPVRHNIIPASAELEAFFAAEEQRQRQAFIDKYNFDPVNDCPLPGRFEWVKLD
What are the official names of this protein?
Cyclin-dependent kinase inhibitor 4, KIP-related protein 4.
What is the protein family that this protein belongs to?
Belongs to the CDI family. ICK/KRP subfamily.
Protein: RCF1_NEOFI
Sequence: MLNEPLPSSMEDNPQFKEETSLQKFRRRLKEEPLIPLGCAATCYALYRAYRSMKAGDSVEMNKMFRARIYAQFFTLVAVVAGGMYFKTERQQRREFEKMVEQRKAQEKRDAWLRELEIRDKEDKDWRERHAAIEAAAKEAGKRPAPNKIPEQDAARSAIEPADEKSIGVLAAVRDLWMQQK
What is the function of this protein?
Cytochrome c oxidase subunit which plays a role in assembly of respiratory supercomplexes.
What are the official names of this protein?
Respiratory supercomplex factor 1, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the RCF1 family.
What are the subcellular locations of this protein?
Mitochondrion membrane; Multi-pass membrane protein.
Protein: RELL2_MOUSE
Sequence: MSEPQPDLEPPQHGLYMLFLLVLVFFLMGLVGFMICHVLKKKGYRCRTSRGSEPDDAQLQPPEDDDVNEDTVERIVRCIIQNEANAEALKEMLGDSEGEGTVQLSSVDATSSLQDGAPSHHHTVHLGSAAPCIHCSRSKRPPLVRQGRSKEGKSRPRPGETTVFSVGRFRVTHIEKRYGLHEHRDGSPTDRSWGSGGGQEPGGSQAAGGGQPRTGTAAIERLLPEPPPSQAAATHSVQNGRLQDASLVPCTLEGTPGTSAELNLGPRGRDPSPGLSSQEANGQPTKLDTSGQQESLPPEAGGM
What is the function of this protein?
Induces activation of MAPK14/p38 cascade, when overexpressed.  Induces apoptosis, when overexpressed.
What are the official names of this protein?
RELT-like protein 2.
What is the protein family that this protein belongs to?
Belongs to the RELT family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass membrane protein.
Protein: MRAY_NOSS1
Sequence: MDAKLSPNQGLNISGIGLASSLAAGLGIAALTLDWMANRNPWQGTSLTLPLLLCTIASAIAGYFVVPLLQALKTGQIIREDGPQAHLKKAGTPTMGGIFFIPVAVVGACVLSNFATEVLAVSALTLSYGLIGWIDDWQILRRKSNKGISPRMKLALQIGFAAAFCLWLMFNQPANITSIALPWVSFALPLGFLFWPLAGFVLVAESNATNLTDGIDGLAGGTVAIALLALGAIVAPTSPALMVFCAALSGSCLGFLAHNRNPARVFMGDTGSLALGGALAAVALLTNSLVALFILSGIFFVETLSVMAQVSYYKATKGPDGKGKRLLKMAPLHHHLELSGWSELQVVSSFYVIAAILAAICLAIASGGA
What is the function of this protein?
Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.
What are the official names of this protein?
Phospho-N-acetylmuramoyl-pentapeptide-transferase, UDP-MurNAc-pentapeptide phosphotransferase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 4 family. MraY subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.