PharMolix/UniProtQA huggingface dataset:
Protein: ACTP3_ACTEQ
Sequence: SVAVAGAIIKGAALTFNVLQ
What is the function of this protein?
Pore-forming protein that forms cations-selective hydrophilic pores of around 1 nm and causes cardiac stimulation and cytolysis.  Pore formation is a multi-step process that involves specific recognition of membrane sphingomyelin (but neither cholesterol nor phosphatidylcholine) using aromatic rich region and adjacent phosphocholine (POC) binding site, firm binding to the membrane (mainly driven by hydrophobic interactions) accompanied by the transfer of the N-terminal region to the lipid-water interface and finally pore formation after oligomerization of monomers.  Cytolytic effects include red blood cells hemolysis, platelet aggregation and lysis, cytotoxic and cytostatic effects on fibroblasts.  Lethality in mammals has been ascribed to severe vasospasm of coronary vessels, cardiac arrhythmia, and inotropic effects.
What are the official names of this protein?
Equinatoxin-3, DELTA-actitoxin, Equinatoxin III, EqT III, EqT-III, EqTIII.
What is the protein family that this protein belongs to?
Belongs to the actinoporin family. Sea anemone subfamily.
What are the subcellular locations of this protein?
Secreted. Nematocyst. Target cell membrane. Note=Forms an alpha-helical membrane channel in the prey.
Protein: MUKF_HAEIE
Sequence: MIETSQTIPELVSWAKDREFSLNLPTERLVFLLAIAIYNNERLDGEMLEADLVDIFRHTMNAFEQSTDAIATRANNAINELVKQRLLNRFSSEFTEGLAIYRLTPLGVGVSDYYIRQREFSALRLSVQLSIVADEIQRASDSAEEGVENNESEHYWRRNVFAPLKYSVAEIFDSIDLSQRIMDENQQSIKDEIAELLTKDWQAAISSCERLLDETSGNLRELQDTLNAAGDKLQAQLLRIQDCVIGRDDLYFIDQLITDLQSKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRVFSQRLRNSIHNYFEHPWFLWTAQAERLVDLRDEEMVLREDDALGELPEELQYESLSDLHDQIVEHMQDLLIAYRENNRPIDLSLVLKEQLENYPLSRHFDVARIIVDQAVRLGMANDDLSGIYPDWQVINKRGAEVQAHVIDKY
What is the function of this protein?
Involved in chromosome condensation, segregation and cell cycle progression.  May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division.  Not required for mini-F plasmid partitioning.  Probably acts via its interaction with MukB and MukE.  Overexpression results in anucleate cells.  It has a calcium binding activity.
What are the official names of this protein?
Chromosome partition protein MukF.
What is the protein family that this protein belongs to?
Belongs to the MukF family.
What are the subcellular locations of this protein?
Cytoplasm, nucleoid. Note=Restricted to the nucleoid region.
Protein: Y6345_CUPTR
Sequence: MNQPLQHAASLLPEDPAALRQLIRAGRYRGHTSGLARGHVQANIVILTRDWAYDFLQFCALNRKACPLIDVTDPGDPVFRNLGRDVDIRTDVPMYRVYRDGNAYHETTGITELWRDDFVAFAIGCSFSFEQALLAANVPLKHINLGRNVAMYRTAIETRPAGRLSGKLVVSMRPLKAADAILATEITARYPDVHGAPVHIGDPRLIGIEDIESPDYGDAVPLDADEIPVFWACGVTPQAVIREARPEICITHAPGCMLVTDLDNNRL
What are the official names of this protein?
Putative hydro-lyase RALTA_B1245.
What is the protein family that this protein belongs to?
Belongs to the D-glutamate cyclase family.
Protein: PG146_VACCA
Sequence: MDSTNVRSGMKSRKKKPKTTVIDDDDDCMTCSACQSKLVKISDITKVSLDYINTMRGNTLACAACGSSLKLLNDFAS
What is the function of this protein?
Plays a role in the maturation of immature virions to infectious particles.  May also participate in viral transcription.
What are the official names of this protein?
Protein OPG146.
What is the protein family that this protein belongs to?
Belongs to the orthopoxvirus OPG146 family.
Protein: DGTL1_PARDP
Sequence: MTAPYACQPEESRGRRWPERMSTFRSPWQRDRDRIIHSSAFRRLKHKTQVFVEHEGDYYRTRLTHTIEVAQVARTIAGALGLNTDLAETVALAHDLGHPPFGHTGEDALAALMAPYGGFDHNAQALRIVTRLERHYADFDGLNLTWESLEGIAKHNGPVTGDLPYALAEVNAEWDLELHTNASAEAQVAAVADDVAYNHHDLHDGLRAGLFTEADLAELPVVGEALARVDALHPGLEPMRRRHEALRRVFGVMVEDVIAVAQNRLASLQPQNVQEIRDMEGPIIRFSKPLYQNLKAIKLFLFQRMYRAPSVVVERRRVTEMLNGLFPLFLDDPSKMPRTWFQAAEAAGDETGRARVVLDYVAGMTDRFAIQEAQRLLG
What are the official names of this protein?
Deoxyguanosinetriphosphate triphosphohydrolase-like protein.
What is the protein family that this protein belongs to?
Belongs to the dGTPase family. Type 2 subfamily.
Protein: SEC12_CANGA
Sequence: MKFHTKLYKVGYPLYGAKFVCDDQFVVTGGGGEGNNGVDNKLTVLKVGSSEGNGLRVDEVCDATLPANDDSPTALDAVGDTILIGCNENSAKVKSGAGNSHVRKFRYDGKSLKFESAADIDKSTNPEDYTKVIRLSKDGSEAAIASSKNPPSMAIIDPRNYSVKYEIETGRDVKDLHFSPNGKLIGYITESSLEIISTVTGSCVVRKTDFDRKIILSKMKFLDDNNVLIAATWASSKGILLTKISIKSGKTTVFWSRQISSKFKGITAMDVNDQMNLVMLATNDNSVLLVKLRNLSVGKTFTQVHGFAITRVIFSPDSRYAVSISAAETVHVIEIPSDFADSRSLSESTTQWLMNTIMVLFLAFVLNSMYKEDMHKNVLNYFRSVKSIDSSSILSMEDMEQVTLVGTISTSVRSTTQRFESSKSVSSTSVVARTNVSEKERSQQDPVKKSPEQHQQNQQ
What is the function of this protein?
Guanine nucleotide-exchange factor (GEF) required for the formation or budding of transport vesicles from the ER.  This function involves the cytoplasmic domain of the protein, which is thought to interact with the small GTP-binding protein SAR1.  Required for autophagy (By similarity).
What are the official names of this protein?
Guanine nucleotide-exchange factor SEC12, Protein transport protein SEC12.
What is the protein family that this protein belongs to?
Belongs to the WD repeat SEC12 family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Single-pass type II membrane protein. Golgi apparatus, cis-Golgi network membrane; Single-pass type II membrane protein.
Protein: RECF_MACCJ
Sequence: MKLKTLTLTHYRNYETAELNFSDEVNIFIGINAQGKTNLLEAIYCLAMAKSHRTSNDKELIGWGHEFSHIEGMLSYKHGTMPLSLSISKKGKKAKVNYLEQKRLTEYIGHMNVVLFAPEDLNLVKGSPQIRRRFIDMEIGQISAVYLNDLSNYQRLLKQKNHLLKQMKLSNSNDMTMLEVINEQFAQYAVKLTLRRKMFIEQLETLAIPIHTGITKDKERLSLRYNASLNYELAEQEMFEETIRILNANMGKEIERTQSLYGPHRDDLSFKINDIDVQTYGSQGQQRTTALSIKLAEIELINQEIGEYPILLLDDVLSELDDDRQTHLLTTIQHKVQTFVTTTSVEGIEHETINKAKLFNVSEGQISTN
What is the function of this protein?
The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility.  RecF binds preferentially to single-stranded, linear DNA.  It also seems to bind ATP.
What are the official names of this protein?
DNA replication and repair protein RecF.
What is the protein family that this protein belongs to?
Belongs to the RecF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CG025_XENTR
Sequence: MSVDSMLCDRIDIAKQLIKRAEALSRSRVGGVEGGAKLCSKLRAELKFLQKVETGKVAIKESHLRSTNLTHLQAVIESAESLEEVVSVLHVFCYNDQFGEKQSLVVDVVANSGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASSQQPVQYSSPHIIFAFYNSVSKPMAEKLKEMGISVRGDIVAVNVSQENSPEENYLSGSESDCDGDDTSVLHVSKVDSENIVASIAFPTEIKVEVCKRVNLDITTLITYVSALSHGGCEWIFKEKVLTEQAAQERQEKVLPLLNSFMEAKELFACECAVKDFQSILETLGGPAEKERAASLVKRITVVPDQPSERALQLASSSKINSRSISIFGTGESLKAITMTANSGFVRAAANQGVKFSVFIHQPRALTESKESSATPLPNNYISSNQL
What are the official names of this protein?
UPF0415 protein C7orf25 homolog.
What is the protein family that this protein belongs to?
Belongs to the UPF0415 family.
Protein: KDPC_AGRVS
Sequence: MLSHLRPAITMTVLFTGLCGLAYPLAITGVAQAVLPAQANGSIVTKGDAVVGSALIGQAFTSPRYFASRPSATSNSPYNPLASGGTNLGATSQKLKDQIAAAVTAWQANGRSGPVPADAVTSSASGLDPDISPENARQQVALVAKARNMPEKDVAALVEAQVQPRLLGVIGEPRVNVLRLNMALDAAGATQ
What is the function of this protein?
Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm.  This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
What are the official names of this protein?
Potassium-transporting ATPase KdpC subunit, ATP phosphohydrolase [potassium-transporting] C chain, Potassium-binding and translocating subunit C, Potassium-translocating ATPase C chain.
What is the protein family that this protein belongs to?
Belongs to the KdpC family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: GPMA_SALPC
Sequence: MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLVYEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK
What is the function of this protein?
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
What are the official names of this protein?
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, BPG-dependent PGAM, PGAM, Phosphoglyceromutase, dPGM.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.
Protein: NADD_LEPBJ
Sequence: MTSPILTGIFGGSFDPPHEGHSGILKSFFREVPDCREIFLIPNRQNPLKGEKFSSSENILEMLNLFVSEFSETIRILDLELNHPGPSYTIETIQKLKTLHPNREFVLLIGEDNYSNFHKWRNYEKILDEVRKVFVFRRFSEVVPRNSKLFSQFQFLKNPLIPASSTDLRQSFFQSTIPDRIPKKVLDYILRNRLYSK
What is the function of this protein?
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
What are the official names of this protein?
Probable nicotinate-nucleotide adenylyltransferase, Deamido-NAD(+) diphosphorylase, Deamido-NAD(+) pyrophosphorylase, Nicotinate mononucleotide adenylyltransferase, NaMN adenylyltransferase.
What is the protein family that this protein belongs to?
Belongs to the NadD family.
Protein: HSCB_ECOHS
Sequence: MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF
What is the function of this protein?
Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins.  Seems to help targeting proteins to be folded toward HscA.
What are the official names of this protein?
Co-chaperone protein HscB, Hsc20.
What is the protein family that this protein belongs to?
Belongs to the HscB family.
Protein: METK_ECOL5
Sequence: MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK
What is the function of this protein?
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP.  The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
What are the official names of this protein?
S-adenosylmethionine synthase, AdoMet synthase, MAT, Methionine adenosyltransferase.
What is the protein family that this protein belongs to?
Belongs to the AdoMet synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SPAG1_DANRE
Sequence: MSQQEVCPLNLFQSAQGTGRVCMRVCVCERGRELAVLYRAAMGNAQKKGPGYREGGGPNSQPGTPGRRRSHGLNNAANSKEVPGSSPAANGSLPAGKSQDEPQGPGSAGESCNLDAPCGALPPPLARLKNQGNMLFKNGQFGDALEKYTQAIDGCIEAGIDSPEDLCVLYSNRAACFLKDGNSADCIQDCTRALELHPFSLKPLLRRAMAYESLERYRKAYVDYKTVLQIDISVQAAHDSVHRITKMLIEQDGPDWREKLPEIPAVPLSAQQHRKEEPSAELLQARAERAEQEKARKAEARFTILKQEGNELVKNSQFQGASEKYSECLAIKPNECAIYTNRALCFLKLERFAEAKQDCDSALQMEPKNKKAFYRRALAHKGLKDYLSASTDLQEVLQLDPNVQEAEQELEMVTNLLRESLLANAQG
What is the function of this protein?
May play a role in the cytoplasmic assembly and/or trafficking of the axonemal dynein arms.
What are the official names of this protein?
Sperm-associated antigen 1A.
What are the subcellular locations of this protein?
Cytoplasm. Dynein axonemal particle. Note=Colocalizes with tubulin.
Protein: RPOB_HAEI8
Sequence: MGYSYSEKKRIRKDFGKRPQVLNVPYLLTIQLDSFDKFIQKDPEGQQGLEAAFRSVFPIVSNNGYTELQYVDYRLEEPEFDVRECQIRGSTYAAGLRVKLRLVSYDKESSSRAVKDIKENEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTEEILNLFFDKITFEIAGDKLLMTLVPERLRGETASFDIEANGKVYVERGRRITARHIKALEKDNISQVVVPSEYILGKVASKDYVDLESGEIICPANGEISLETLAKLAQAGYTTIETLFTNDLDYGPYISETLRVDPTYDKTSALYEIYRMMRPGEPPTPESSEALFNNLFFSAERYDLSTVGRMKFNRSLAFPEGEGAGILSNEDIIAVMRKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDLDAITPQDLINPKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHNTHYGRLCPIETPEGPNIGLINSLSAFARTNDYGFLETPYRKVVDGQVTEEIEYLSVIDEANYIIAQANSNLDENNRFTDAFVTARGERGESGLYKPEDIHYMDVSTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAVVAKRGGTVQYVDASRIVIKVNEDETIAGEAGIDIYNLIKYTRSNQNTCINQIPCVNLGDPINRGEVLADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQQDRFTTIHIQELSCVARDTKLGAEEITADIPNVGESALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGTSGTVIDVQVFTRDGVEKDKRALEIEEMQLREAKKDLTEELEILEAGLFARVRNLLISSGADAAQLDKVDRTKWLEQTIADEEKQNQLEQLAEQYEELRKEFEHKLEVKRKKIIKGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAKGIGDQINAMLKQKQEVEKLRSYIQKAYDLLGNGSQKVDLSTFTDEEVLRLAGNLRKGLPVATPVFDGADEAEIKELLKLGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVSGNQHMEPGTPESFNVIMKEIRSLGLNIELDEE
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta, RNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta chain family.
Protein: MK08_XENLA
Sequence: MSRSKRDSNFSVFEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAFDAVLERHVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDLYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCILGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCTEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDDALQHPYINVWYDPLEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVLDWEERAKNGVIRGQPAPLGAAVTDGSQAHTSSSSGDASSMSTDPTLPSDTDSSLETSAGTLGCCR
What is the function of this protein?
Responds to activation by environmental stress and pro-inflammatory cytokines by phosphorylating a number of transcription factors, and thus regulating transcriptional activity (By similarity).  Regulates morphogenic cell movements, controlling convergent extension during gastrulation.  May play a role in the regulation of the circadian clock (By similarity).
What are the official names of this protein?
Mitogen-activated protein kinase 8, MAP kinase 8, MAPK 8, Stress-activated protein kinase JNK1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Synapse.
Protein: FLGH_XANCB
Sequence: MSRLPSLSSLCLAIACSALLGGCVAAGDVRPFAELAPIVPVVAPVAQPTAGAIYAAGPSLNLYGDRRARDVGDLLTVNLVENTTASSTANTSISKADTVDMSTPTLLGVPLTVNGIDVLRNSTSGDRSFDGKGNTAQSNRMQGSVTVTVMQRLPNGNLVIQGQKNLRLTQGDELVQVQGIVRAADIAPDNSVPSSKVADARIAYGGRGAIAQSNAMGWLSRFFNSRLSPY
What is the function of this protein?
Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
What are the official names of this protein?
Flagellar L-ring protein, Basal body L-ring protein.
What is the protein family that this protein belongs to?
Belongs to the FlgH family.
What are the subcellular locations of this protein?
Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body.
Protein: TF2B2_THEAC
Sequence: MTVEGETPKRCPECNSEHLIRDYEHGELICADCGAVIEDAYIDQGPEWRAFDSDQDERRARTGSPMTYLSHDKGLATEISWSNKDYYGKRIPHKNRAQIYRVRKWHQRIRVSNAAERNLSLALQLLNDIGAKLGIPKDIKETAALIYRKAVEKNLIRGRSIESIVCASIYAACRKVNIPRTLDEISKASEVNKKKIGKAYRHLAKELDLNLKPTTPFSYISQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEIARISGVTEVTIRNRYKEISKALNISISE
What is the function of this protein?
Stabilizes TBP binding to an archaeal box-A promoter.  Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
What are the official names of this protein?
Transcription initiation factor IIB 2, TFIIB 2.
What is the protein family that this protein belongs to?
Belongs to the TFIIB family.
Protein: ESTD_PIG
Sequence: MALKQLSSNKCFGGLQKVFEHDSVELKCKMKFAIYLPPKAETGKCPALYWLSGLTCTEQNFITKSGYHQAASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYLDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICTLKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDESKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLSDGQLLPDNFIAACTEKKIPVVFRSQEGYDHSYYFIATFITDHIRHHAKYLNA
What is the function of this protein?
Serine hydrolase involved in the detoxification of formaldehyde.
What are the official names of this protein?
S-formylglutathione hydrolase, FGH, Esterase D.
What is the protein family that this protein belongs to?
Belongs to the esterase D family.
What are the subcellular locations of this protein?
Cytoplasm. Cytoplasmic vesicle.
Protein: ACYP_CALMQ
Sequence: MGSGVRVRVIVKGIVQGVGFRSFIRRHATALGLTGYVRNLPDGESVEIVVSGPEDRVNELIKLAKRGPPAAVVDSVEVEPYEGVEDFTGFSVRYD
What are the official names of this protein?
Acylphosphatase, Acylphosphate phosphohydrolase.
What is the protein family that this protein belongs to?
Belongs to the acylphosphatase family.
Protein: RLMH_STRP4
Sequence: MKIKVVTVGKLKEKYLKDGIAEYSKRISRFAKFEMIELSDEKTPDKASESENQKILEIEGQRILSKIADRDFVIVLAIEGKTFFSEEFSKQLEETSIKGFSTLTFIIGGSLGLSSSVKNRANLSVSFGRLTLPHQLMRLVLVEQIYRAFTIQQGFPYHK
What is the function of this protein?
Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase H, 23S rRNA (pseudouridine1915-N3)-methyltransferase, 23S rRNA m3Psi1915 methyltransferase, rRNA (pseudouridine-N3-)-methyltransferase RlmH.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase RlmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DBP10_ASPCL
Sequence: MAPRAASPALSENEFDITGALFQNDSESDNERSSAKSKRQPKKKIPSQDLDFLGDVNDDDGDEAFIAQQQTSANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKLRSHSTKVGARGLILSPSRELALQTLKVVKELGKGTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLHLKVEMNLDLYSIRYVVFDEADRLFEMGFAAQLTEILHGLPPNRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPDLQNAFFSIKSSEKEGALLYILHEVIKMPTGPTEMAQQRQGEDASARFSKANKRKRAEMEKAVNTKESPTQHSTIVFAATKHHVDYLYSLLHEAGFAVSYVYGALDQTARKIQVQNFRSGLSNILVVTDVAARGIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRRLVVGRENGDHVNFAEDVVAGGLPRDGLSQNCEWVTKVLGDDADIAAQRTVATKGEKLYMRTRNSASLESAKRAKQVVSSDHWTSIHPLFQDESSNLEAEREKMLARIGGYRPSETIFEVNTRRIGKQESEEALNTIKRVRTTLETKKKRSKANAKSEFLEDAPEGLKTGEGEAGKNEDEAAFSDADDIDAPTGVADDMSLASDSELEVTFSSYSQSNGNKSKKASAASFQNPDYFMSYTPNNNSLAEDRAYGVHSGTNSNFAQASRSATMDLAGDEGSRGFGEPRTMMRWDKRHKKYVARQNDEDGSKGTRLVRGESGAKIASSFRSGRFDAWKRGNRVGRMPRVGEAEAPNLAAGLNAALSGKRFKHRREQAPKRADPLRGDYEKMKKKADKAKERSMSKAGGAAAGGKSELRNTDDIRIARKLKQRRQEKNARPSRKR
What is the function of this protein?
ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5. 8S rRNAs.
What are the official names of this protein?
ATP-dependent RNA helicase dbp10.
What is the protein family that this protein belongs to?
Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
What are the subcellular locations of this protein?
Nucleus, nucleolus.
Protein: CYB_CTEPO
Sequence: MTNTPQSHPLIKIVNHSFIDLPAPSNISAWSNFGSLLGVCLGLQLLTGLFLAMHYTADTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFIFLYFHIGRGIYYGSYTFMDTWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGMNSDSDKIPFHPYYTIKDILGILFMMITLMSLVMFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILILMLFPILHSSKQRSMSFRPLSQCLMWMLVANLLILTWIGGQPVEHPFITIGQLASVTYFFIILILMPSTALMENKLLKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: RL31_SULNB
Sequence: MRKGIHPEYMECKVTCACGNKFEVRSNKPEMSIDICNECHPFFTGSEKILDAAGRVDKFKKKYNLG
What is the function of this protein?
Binds the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L31.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
Protein: SICA_SALTI
Sequence: MDYQNNVSEERVAEMIWDAVSEGATLKDVHGIPQDMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFYNPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQCQLLMRKAAKARQCFELVNERTEDESLRAKALVYLEALKTAETEQHSEQEKE
What is the function of this protein?
Type III secretion-associated chaperone required for SipB and SipC stabilization.  Prevents premature association of SipB with SipC, which may lead to their targeting for degradation.  Along with InvF, required for transcription activation of sigDE (sopB pipC), sicAsipBCDA, and sopE (By similarity).
What are the official names of this protein?
Chaperone protein SicA, Salmonella invasin chaperone.
What is the protein family that this protein belongs to?
Belongs to the LcrH/SycD chaperone family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PSBA1_SYNR3
Sequence: MQTTIQQRSGASAWQQFCEWVTSTDNRLYVGWFGVLMIPTLLAATTCFIVAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPFQLVIFHFLIGIYAYMGREWELSYRLGMRPWICIAYSAPVAAASAVFLVYPFGQGSFSDAMPLGISGTFNYMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTESESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGFNFNQSILDSQGRVLNTWADILNRAGLGMEVMHERNAHNFPLDLAAAESAPVALQAPAIG
What is the function of this protein?
Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
What are the official names of this protein?
Photosystem II protein D1 1, PSII D1 protein 1, Photosystem II Q(B) protein 1.
What is the protein family that this protein belongs to?
Belongs to the reaction center PufL/M/PsbA/D family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Multi-pass membrane protein.
Protein: RK33_GRATL
Sequence: MSKSKGARIVITLECCCRNLNNITKKKSGIFRYTSTKNRKNTPNRIELMKFCPYCNKHQKFREIK
What are the official names of this protein?
50S ribosomal protein L33, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RBFA_CLOBH
Sequence: MAKYRAGRINEEVKKEVSNIIHNDIKDPRLSAMVSVTDVNVTKDLKYAKVYVSIFGNEKAKEESLEALKSSVGFIRKEVGRRVKLRNTPEVIIEVDNSIERGMHIDELLHSIKENESNDN
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes).  Required for efficient processing of 16S rRNA.  May interact with the 5'-terminal helix region of 16S rRNA.
What are the official names of this protein?
Ribosome-binding factor A.
What is the protein family that this protein belongs to?
Belongs to the RbfA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LTG17_ARATH
Sequence: MKIGVVLVLLTVFVVVMSSTSVSAQSDEDECLKETGQMQLNCFPYLTDNRIHTPSFACCSEVYTVGKTYVDCFCQFINNGGPSFGIVVSQKLLDLPELCGVYGACGNGKNFKNTSL
What is the function of this protein?
Probable lipid transfer protein.
What are the official names of this protein?
Non-specific lipid transfer protein GPI-anchored 17, AtLTPG-17, Protein LTP-GPI-ANCHORED 17.
What is the protein family that this protein belongs to?
Belongs to the plant LTP family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor, GPI- anchor.