PharMolix/UniProtQA huggingface dataset:
Protein: YBED_ECOSE
Sequence: MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL
What are the official names of this protein?
UPF0250 protein YbeD.
What is the protein family that this protein belongs to?
Belongs to the UPF0250 family.
Protein: ATPB_AMBTC
Sequence: MRINPTTSGSGSGASTLAEKSVGRIAQIIGPVLDVAFPPGKMPNIYNSLVVKGRDTAGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGPDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAINLEVESKLKK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, chloroplastic, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein.
Protein: G6PI_COXBR
Sequence: MSLVESPPWQALKSKYQELSSLHMRDFFAQDKKRGTRLSLEAAGLYFDYSKNRVDEKTIDLLCESANACNLPLRIEQLFSGKLTNESGEMVGFHTALRQVNNFSFKTNNNAIQEIHASWEKIKKLSIRIREGDYKGFTNKSITDIVNIGIGGSSLGPQMAYNALKPYVKAPLRCHFISNLDDTDFYETVRTLNPETTLFIITSKTFTTKETLENARRATEWLMQAAKKENLIQTHFMAVTAAPEKAHEFGIQKDNIFMLWPWVGGRFSVWSAAGLSLAIAIGWEEFFEFLRGAHAMDTHFRQAEFNKNMPILLALLSIWYINFFHAKTQAIIPYSQRLVYLPDYLTQLHMESLGKSVQLDGSAVHWQTGAVVWGDLGTNSQHSFHQLFLQGTMVIPVDFIAVLKNSRESHWQLPLIANCLGQSQTLMEGYDKEGVMRDLINQGIEHEKAEKLATYRLIRGNNPSNTIILEELNPYSLGSLLALYEHKVYVQSVIWNINPFDQWGVERGKHLAKDILQALQAETDQSSFDSSTERLINYVLKIKGNRP
What is the function of this protein?
Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.
What are the official names of this protein?
Glucose-6-phosphate isomerase, GPI, Phosphoglucose isomerase, PGI, Phosphohexose isomerase, PHI.
What is the protein family that this protein belongs to?
Belongs to the GPI family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UVRB_SYNC1
Sequence: MAKFNLKSNYQPRGDQPQAIEELSTGLQRGDKHQVLLGVTGSGKTFTMANVVAQVQRPTLVLAHNKTLAAQLYGEFKELFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSINEEIDKMRHSATRSLLSRNDVLIVSSVSCIYGLGSPEAYYGMLIRLETGMQLDRNALLKNLVEIQYDRNDVDFHRGTFRVRGDTVEIFPAYEEKRALRIEFFGDEIDAICEIDPLRGKVLDRLERTAVFPASHYVATRPTLDRAIREIQDELRERLTWFRENNMLLEAQRIEQRTMFDIEMIEEMGYCQGIENYSRFLDGRQAGQPPATLFDYFPDDALLFIDESHVTVSQIGAMYRGDRSRKETLVRYGFRMPSALDNRPLTFEEFEAKGIQTIYVSATPADYELRKADGVVVEQIIRPTGLLDPPIDVRPAKDQVDDLIHEIRLTIKQNERVLVTTLTKRMAEELTGYLGELGIKVRYLHSDIDTVERMQILRELREGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTCGRAARNVAGRVIMYADRITRSMRACLDETERRRTAQLAYNEEHGITPQTVKKSLRSILEDIAEKDYVELPQVAEELGDYHTPQDVKNEIARVKEEMLAAAANLEFEKAAELRDRMLELDKLELSIRNVK
What is the function of this protein?
The UvrABC repair system catalyzes the recognition and processing of DNA lesions.  A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities.  Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer.  DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands.  Then UvrB probes one DNA strand for the presence of a lesion.  If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed.  This complex is subsequently bound by UvrC and the second UvrB is released.  If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.
What are the official names of this protein?
UvrABC system protein B, Protein UvrB, Excinuclease ABC subunit B.
What is the protein family that this protein belongs to?
Belongs to the UvrB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y325_AZOVD
Sequence: MLKKTLAALALGSALLGAGQAMAADYVIDKEGQHAFVNFKISHLGYSWLYGTFRDFDGSFSFDAAKPEASKVKVNLKTASVDSNHAERDKHIRSADFLNVAKHPTATFESTGVKSTGQDTFDITGNLSLNGVTKPVVIAARFIGEGKDPWGGYRAGFEGGTKLKLKDFGIQKDLGPASQEVDLIISVEGVRQ
What are the official names of this protein?
UPF0312 protein Avin_03250.
What is the protein family that this protein belongs to?
Belongs to the UPF0312 family. Type 1 subfamily.
What are the subcellular locations of this protein?
Periplasm.
Protein: PSBL_GLOVI
Sequence: MSKDPKNPGVELNRTSLYMGLVLVLVIILLFSNYFIN
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
What are the official names of this protein?
Photosystem II reaction center protein L, PSII-L.
What is the protein family that this protein belongs to?
Belongs to the PsbL family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: GSF2_YEAST
Sequence: MEIYIRLNADVEHDYAFQVSNEDTINNKIKKIFPSKTGLADLMVLRPSIFHEKEPVKFYKSIHPGYLSEGGCLMFHYEADNEENLEELNDSKPLIDQLWPGQLVVPEWKLSKKNIWVYTIIMLAWLYTDLPDAISPTPGICLTNQLSRLLIPVAKHMDLPEIAAKLEQEVQANYSSLVAQWLFFVMHIFKVGIITLFLKLGIANPISFNPYKLWSLRDLTSPSANGAKNSGGNNNTTDLKTRLRSLGWIGAKRATYDDYQTNYYNYVIDKMGGAVAAYRAGAIRKAAAPGIQLVAGEGFQSPLEDRFTASTFTAIKTERKFILSEEYFVELENNLKKILEEYDGDIGKMNAEIRRFRRFGIYEPDEKLASLVKLRREIADEKEKASNNDATFGIKKNDLKKSN
What is the function of this protein?
May be involved in the secretion of hexose transporters from the endoplasmic reticulum.  Involved in secretion of GAL2 and HXT1.
What are the official names of this protein?
Glucose-signaling factor 2, Extracellular mutant protein 6.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Single-pass type II membrane protein.
Protein: HISZ_RHILO
Sequence: MTSRFPAIAANITKLFAARNTHAVEVAILQPADPFLDMAGEDLRRRIFLTESETGQTLCLRPEFTIPVCLDHISSQAGTPRRYSYLGEVFRQRREGGNEFFQAGIEDLGDRDTAQADARSVADAHALLSLVLPGRSLAVTLGDQGIFEAVLAALGLPRGWRMRLARAFGSAPMLQAALADLANPPRNGQLSGEVAALVLDGDLDGLSTHIAGGMEQAGLSASAGRSPTDIARRLIEKAELRSVRLSNEAFAALKNFLAIHVPLDGAARALETFAAGAGLSLGAALEKFAARAKAIEAHGLPAEKIRYDAAFGRPLDYYTGVVFEIAAQGGERPLAGGGRYDRLLTLLGAKTAIPGVGFSVWLDRIEALREAAP
What is the function of this protein?
Required for the first step of histidine biosynthesis.  May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine (By similarity).
What are the official names of this protein?
ATP phosphoribosyltransferase regulatory subunit.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RLME_SHESA
Sequence: MSGKKRTASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQEKDQLIRPGMTVVDLGAAPGGWSQIAVKLTGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDVVLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKDAFKVVKTRKPDSSRARSREVYLVATGYKL
What is the function of this protein?
Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase E, 23S rRNA Um2552 methyltransferase, rRNA (uridine-2'-O-)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ELP2_RAT
Sequence: MVSSVLEVSYVFCCPNRARGALSWNSGPGGLLAFGTSCSVVLYDPQKKVVITNLNGHTARVNCLHWIRTEDGSPSTELVSGASDNRVIHWELENNQVLKSVRLQGHEGPVYAVHGIYQSGPSDGEQHALIASAASDSTVRLWSKKGSEVKCLQILKFGDGFVLTVCLSTLPDTDAPVLACGDDGGRIHLFVQQDDWFQKMLSLCGHEDWIRGVEWATFGRDLFLASCSQDCLIRIWRLYMKPTSLETEDGSIRLKENTFTIKDGGVSTTVAVILETVLAGHENWVNAIHWQPSFYKDGVLHQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYGCQFGENGSMIIAHAFHGAMHLWKQSTVNPRQWAPEIVISGHFDGVQDLIWDPEGEFIITTSTDQTTRLFAPWKKKNQSQVTWHEIARPQIHGYNLKCLAMIDRFQFVSGADEKVLRVFSAPRNFVENFSVISRQSLSHMLYDEDNDLPEGATVPALGLSNKAVFEGDMTYLTSEEEELLSPAFGYPQVIFQPAVLSEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVTCNNSKTLLASACKAAQKEHAAIILWSTTSWKQVQSLAYHTLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDVTSAEFDPFFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECNSSYNPMEHPINPCSSILDVGSCVTAVSVCPVLNPAQRYIVAVGLESGKICIYSWSKTNQETKDWTSCVETTPSQSHTLGIRRLCWKSCSGSTEQSEEGTEWLDFASCGEDHTVKIYRVNRCAL
What is the function of this protein?
Component of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine).  The elongator complex catalyzes the formation of carboxymethyluridine in the wobble base at position 34 in tRNAs.
What are the official names of this protein?
Elongator complex protein 2, ELP2, SHINC-2, STAT3-interacting protein 1, StIP1.
What is the protein family that this protein belongs to?
Belongs to the WD repeat ELP2 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: NLRC5_ICTPU
Sequence: MKMEEMDLEEDVLDVVDQEASTIVDILCEQRDNVLQRIFALVDARTREQLQHLPNNRESISGLVDYFRTSDQHTCRRFLDIIWSFCENIPLELDIRIVNLAGSTAGALVNNSHVPDTENSPQSRYGKRARLDQVQSYTNAVKSFLQKKFEKVTKDIKKEVCLNNTWLCWRTQKYARVRDRPAKSQEGEEVSLEHKESVEALLMKTGRVVMLSGQAGSGKTLLMHCLAHHWAQGSYPSIELLFLLEFRQLNLISQPLSLKELLFRFFLPSDEDDEQSEAVLNYVLSNPEKICFIFDGYDEFGARFKDPKELECSVNPYQQLPLADLLSALCSAKILPGCTVLVTCRPRDVFDLFGSSDYFVAELLGFNQQRVKEYTQEYFQEKGCEIKERAVSLLMDSHHLLSMSHVPGLCHVCCVCLDHFLTSDMSQQPGTQLPTSLTQIYLHILSAFISRCHGCGSSDNHTPLLQRYRVQIAMLSKLAMDGLENSRIVFPANELTTELMNFGANAGILSRLDLTCGDGSRRLGCAFTHLTIQEFMAALHLMTNPDITESQLKKKLNLKSRWTAKTDPKTVFTDSLHLYMCGLAAEACTSNLVLLKGSENARAIVLKRQDAVLKTLQRFVVSGRQTGPKIIELCRCAHETQNIDLARAIGPRDRFELRNIRLNPVDIDALAFVISSANQMVCLDFGACYIEPECLNIIPNCKNLEELNFRSRKYDDKFAEALSGILPKLQSLKQLHFISGGLTNIGAAKLFKASECCPQITRLNVSDNYLTDESVKKITELFPKLAKLTSVILGKNNISINGIFILAGKMAAFPNIKEVYANAKKKEINVQFSANTTNSASTDDLNNTEESKQLILNDWNLKWTNVHNLCPMLRGCSSLTVLNLSHNALGNRGLKKLLEHLPTLDTIQEINVSDNGVDMDGVVLLSPLLCTLKDLTEVEASHNGKKMLVLTFSSSIIDALKQVTSEGCDILHKKLSLTHSDIHPTDMNKLCKNLIKCPNPLNLDFSHGTLKDESTEKLLKFLPNMASLNLLNLSHIQMSTDSALLLVQLLSDCQRTTTVELRQLGETFIKFLQDKSEAATCKFNQYRLSSANLAKLCEILEHCHHLTDLDLSSNFLKDEDVKTFVQFLPKLQISGSVSLNNNNLTEVGVLYLLSLMHTCERVAAVEVSLGKEEQQDIIGFVQKNCTGKTFRLSSCTVQSQNVLFLLNKLATLNSVQTLELRNNSFSADTIKYLITEFCGDCNHRTIRIMEPWIKGEAAVGLVQCCLELNPNIKEIRVEKTCLKLSVESLVSATIPNEWENGNCSLSAVHCISFDDCEVEGQHLSSLQSALRNCPSLQELHFSQLTMGADGAEFLSSVLPSLKNLKILSLSSKGETEDEAVIFALQHAQKHLEQLSLAHHVIKDRGAAVLGNALQGFTRMRSLSLLKCLDWTATGGRDLVRGLVQCHSLEEIRLDSIELDEESIDCFAQGLQAMTSLKKISLNKTISKEGSGVLCLLASLHPLIELEEIELIGLRMGDRGVEELVKHIPKWTRLRKINLSENRVSDHAGEMLVKALSHCRALQQIHLFRNNLGHSSAAVLGQVLPSLSELTELDLSENQMESKGCSSVCEALVSMKALKKLHLTSIGTSDLVNVASCLKHCTSIEDISLSWNNCENDVVLKLAEVLPQCSKLKRLDLEANNINTSGAMALATCLQFCPWIEVIRLWRNPIKKDDLILKDKRLNFSST
What is the function of this protein?
Probable regulator of the NF-kappa-B and type I interferon signaling pathways.  May also regulate the type II interferon signaling pathway.  Plays a role in homeostatic control of innate immunity and in antiviral defense mechanisms (By similarity).
What are the official names of this protein?
Protein NLRC5.
What is the protein family that this protein belongs to?
Belongs to the NLRP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y2843_AERS4
Sequence: MAGHSKWANIKHRKAAQDAKRGKIFTKLIREITTSARIGDPDPANNPRLRAAVTAALTSNMTRETINRAIARGAGGGDGEQLETIVYEGYGPAGSAVMVECLTDNRNRTVAEVRHAFSKSGGNLGTDGSVAYLFSKKGLLTFVGVDEDALMDAALEAGADDVVTEEDGSIEVYTTPNDFGTVLDALEAAGFKAQNAEVTMIPSTEAELDAETAPKLMRLIDMLEDLDDVQEVYHNGSISDEVAATL
What are the official names of this protein?
Probable transcriptional regulatory protein ASA_2843.
What is the protein family that this protein belongs to?
Belongs to the TACO1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SPC1_ASHGO
Sequence: MEIFNDLSRKLVFPIDYPSQRRVAKLTDIILGSGTLVSCLLGFYAGSLSLTLYAFAAAYGLALLLVVPAYGKYRQQKLAWVGSAAATTKDL
What is the function of this protein?
Component of the signal peptidase complex (SPC) which catalyzes the cleavage of N-terminal signal sequences from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum.  Dispensable for SPC enzymatic activity.
What are the official names of this protein?
Signal peptidase complex subunit 1.
What is the protein family that this protein belongs to?
Belongs to the SPCS1 family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein.
Protein: HIS4_SALEP
Sequence: MIIPALDLIDGTVVRLHQGDYARQRDYGNDPLPRLQDYAAQGAGVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRTEEDVAALLKAGVARVVIGSTAVKSPDVVKGWFERFGAQALVLALDVRIDEHGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSNVSLYEEICARYPQIAFQSSGGIGDIDDIAALRGTGVRGVIVGRALLEGKFTVKEAIQCWQNV
What are the official names of this protein?
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLMU_PELPD
Sequence: MENVAAIILAAGKGTRMKSGLVKVLHPIAGRPMIDWPLEAARGAGAAPVVLVVGHQAEAVRERFQGAGDIACALQAEQLGTGHAVACAAPALAGFSGTVLILCGDTPLLRGGTLTDLLAFHRSQGAAVTVLTARMENPHGYGRVLRDEAGRVLRIVEQKDASPQECSVREINSGIYCMEAGFLFDNIGSLGNDNAQNEFYLTDLVAMAAQKGATCLAMAIEDSDEIMGVNDRAQLAQAARILRRRINRDLMLSGVSLVDPEQTYIDQGVVIGPDTLIHPNCSISGPTQIGNGCQIESGVSISSCRIGDRCRIKAGSVLEDSELRADVAVGPMAHLRPGTVLNDHVKIGNFVETKKTVMGEGSKASHLTYLGDAEIGRDVNIGCGTITCNYDGVKKHRTLIGDNVFVGSDVQLVAPVRVGADSLIAAGTTVTRDVPAGSLAISRTPQVNREGWRIRMKKKT
What is the function of this protein?
Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc).  The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.
What are the official names of this protein?
Bifunctional protein GlmU.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the transferase hexapeptide repeat family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YKZ1_YEAST
Sequence: MSKLETVYLYAGEEQPRVKLTCIKEGLTLTQVIKFVHSIQELYGIELQTSETITENLKIDCAPAYLKPNCIPHFYILEYEEISDTFFIWKSDGRWQLNKLSALLYVDNDANVVKNTSWKEVFQNDQRFKNYDKRAWLQNCLEKMNRDLSKLNVEQFWSQYDKICQSIAKQKKKQEQFNMEVFDNFKNIVSIAIIKTKVLSNKRLLTTTLKNYHNSMKKKYNIQEQNLKENSLASCSNNEPSASLESESRHFSPVNSLSPSSLSTDDEAVSTDYIYKGPESKPNVNFMHSSATNDLIKSNFESYFKLMAEDYETFDLRAWSRQRPRKFQLVEKKKITKNPPNSHHPHKNGKISF
What are the official names of this protein?
Uncharacterized protein YKR011C.
Protein: HFQ_ALKMQ
Sequence: MKNNINLQDVFLNQVRKENIQITIYLVNGFQLKGFVKGFDNYTIVLDSDGKQQLIYKHAISTILPITPINFMQSSKKQGE
What is the function of this protein?
RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations.  Also binds with high specificity to tRNAs.
What are the official names of this protein?
RNA-binding protein Hfq.
What is the protein family that this protein belongs to?
Belongs to the Hfq family.
Protein: RLMH_METVS
Sequence: MNITIISVGKIKEKYLEDAVLEYKKRLSRYTKLNIIEISDEKTPENPSDVEKSKILDKEAEGIFKNLKGDFYVVTLEILGKELDSKELAKNINDLSISGKKNIVFVIGGSLGLSQKVSEKSNFKLSFSKMTFPHQLMRVILLEQIYRSFRIINGEPYHK
What is the function of this protein?
Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
What are the official names of this protein?
Putative ribosomal RNA large subunit methyltransferase H, 23S rRNA (pseudouridine1915-N3)-methyltransferase, rRNA (pseudouridine-N3-)-methyltransferase RlmH.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase RlmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: STBPA_DANRE
Sequence: MSEHTDCSVSSEDRVRALTKLGSSVDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEKLPKHREYKTANIPEKKETMRKLKEIAFPKAEELKKLLLKQYDKEHAEYLVRKRAEDAARAVEMLKQQEQEAQRQRLAELQQRQREQEQFSAFEEMIRRQELEKERRRIVQEFSIPVSPTAPDVLLPDVHGPPQASLSPQTPPAGATNHQGLPAFDRSLKPSVPVSAGHSALVNGLRQLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPKFNETGYFRLTDYGMDDVGTCKQRGFHPHPKDPPLFAASHHVSITDGSVTMLDLR
What is the function of this protein?
Zinc metalloprotease that specifically cleaves 'Lys-63'-linked polyubiquitin chains.  Does not cleave 'Lys-48'-linked polyubiquitin chains (By similarity).  Functions at the endosome and is able to oppose the ubiquitin-dependent sorting of receptors to lysosomes (By similarity).
What are the official names of this protein?
STAM-binding protein-like A.
What is the protein family that this protein belongs to?
Belongs to the peptidase M67C family.
Protein: IF2_CAMJE
Sequence: MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAAAIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKKEELKIEKENAKEEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVKNSNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDISLDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGFEGGIQRRSRKKPSKKIEKKEVEEVGSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFGIEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATVIVQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVKTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERAKDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMVTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDYIESYKEVEEQASL
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
What are the official names of this protein?
Translation initiation factor IF-2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TRPB_LEGPC
Sequence: MIKKELPDEFGHFGPYGGMFVADTLVSALKQLEHAYTKYRNDQDFLSELHTELKDYVGRPNPLYHAVHLSKKIGGAQIYLKREDLNHTGAHKINNTIGQALLAKRMGKTRVIAETGAGQHGVATATVAAKFGFQCVVYMGSEDIKRQSSNVYRMKLLGAEVVPVTSGSKTLKDALNEALRDWVSHVDDTFYIIGTVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIGLFYPFLNDQSVMIYGVEAGGKGIETGEHSASLIAGKPGVLHGNRTYLLCDEYGQVKDTHSVSAGLDYPGVGPEHAYLKDTGRVIYKAINDSEALDAFRLLTHTEGIIPALESSHAVAYAIQLAKTMSKEQSIIVNLSGRGDKDMHTVAAIDGITI
What is the function of this protein?
The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.
What are the official names of this protein?
Tryptophan synthase beta chain.
What is the protein family that this protein belongs to?
Belongs to the TrpB family.
Protein: EX7S_RHOBA
Sequence: MAKKKRNPSAEEAGDGEQTAAELGDFETTLGDVETIVRKLESGALTLDDSLKQYEVAVAKMRQCYQLLDVAERKISVLAGVDAEGRPVTEPLENMSGGESLVQKQASRGKRRGAVAPDHSASDTTGVDSADLDSAEDDE
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EFP_DICTD
Sequence: MISVNDFYPGLTIELEGEIYIVLEYQHVHMAQGQATVRVKLKNLKTGNVIRKTFKSDEYVPQAFINKREAEYLYKQGDEYYFIDNESFEQYILTEEQLGDAIKYLKEGNTVSVLFYEGNPIGIELPTTVVLEVVETDPGLRGDTVSGGSKPAKLETGLVIQVPLFIQIGDKVVVDTRYAKYVERA
What is the function of this protein?
Involved in peptide bond synthesis.  Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro.  Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
What are the official names of this protein?
Elongation factor P, EF-P.
What is the protein family that this protein belongs to?
Belongs to the elongation factor P family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FUCI_SALCH
Sequence: MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALITEKIRHACGAQVECVIADTCIAGMAESAACEEKFSSQNVGVTITVTPCWCYGSETIDMDPMRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSVGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFCYGEDQNASQYKRNEAQNRAVLKESLLMAMCIRDMMQGNKTLADKGLVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEALLNSSFDWNGVREPFVVATENDSLNGVAMLFGHQLTGTAQIFADVRTYWSPEAVERITGQALSGLAEHGIIHLINSGSAALDGACKQRDSEGKPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKAMHDQLDARTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLAAMLRIPVCMHNVEEAKIYRPSAWAAHGMDIEGQDYRACQNYGPLYKR
What is the function of this protein?
Converts the aldose L-fucose into the corresponding ketose L-fuculose.
What are the official names of this protein?
L-fucose isomerase, 6-deoxy-L-galactose isomerase, FucIase.
What is the protein family that this protein belongs to?
Belongs to the L-fucose isomerase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS15_VIBPA
Sequence: MSLNAETKAAIVAEYAQSEGDTGSPEVQVALLTASINHLQGHFKAHKGDHHSRRGLLRMVSRRRKLLDYLKGKDLARYQDLIKRLGLRR
What is the function of this protein?
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
What are the official names of this protein?
30S ribosomal protein S15.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS15 family.
Protein: RIMP_KINRD
Sequence: MPTLDEAVTTVLTPVFAAGSEIGADLALEEVSVTTAGRRQVVRVVVDRAGDEPGDLDLDAVAAASTAVSEALDESGVLGEAPYTLEVSSPGVDRPLTTPRHWSRARGRLVRAVLTDGTALLVRVVSVDEAGVHGTLEPQMVKGKPPRAKDVGAPRDLAWADLVRGEVQVEFRRPGEDVEDLVADPGADDELDELDELDELDDGDEDEQ
What is the function of this protein?
Required for maturation of 30S ribosomal subunits.
What are the official names of this protein?
Ribosome maturation factor RimP.
What is the protein family that this protein belongs to?
Belongs to the RimP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS5_YERPP
Sequence: MSHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRAMINVALNNGTLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRGKSVEEILGK
What is the function of this protein?
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.
What are the official names of this protein?
30S ribosomal protein S5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS5 family.