PharMolix/UniProtQA huggingface dataset:
Protein: MIAB_TRIV2
Sequence: MTTSNRRYHITTFGCQMNKADSERMAGILEDMGFEFSEDPNNADVILYNTCTIRDNAEQKVYSYLGRQAKRKHEQPDLTLVVAGCVAQQEGEALLRRVPELDLVMGPQHANRLKDLLESVFAGNQVVATEAVHIMEDITQARRDSTVTAWVNVIYGCNERCTYCVVPNVRGVEQSRTPEAVRAEMEELGRQGYKEITLLGQNIDAYGRDLPGATPEGRHLHTFTDLLYYVHDVPGIERIRFATSHPRYFTERLIKACAELPKVCEHFHIPFQSGDNQLLKAMARGYTQEKYRRIIDTIRRYMPDASISADAIVGFPGETEEQFENTLKLVDDIGFDQLNTAAYSPRPGTPAALWENQLSEETKSDRLQRLNHLVNVKAAERSQRYMGRIEEVLVEEQNPKDQTQVMGRTRGNRLTFFKGDINELKGQLVKVKINEVRAFSLTGEPIEIRQAVQV
What is the function of this protein?
Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
What are the official names of this protein?
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB, tRNA-i(6)A37 methylthiotransferase.
What is the protein family that this protein belongs to?
Belongs to the methylthiotransferase family. MiaB subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NUOD1_RHIME
Sequence: MTEHNVRNFNINFGPQHPAAHGVLRLVLELDGEIVERVDPHIGLLHRGTEKLIEAKTYLQAIPYFDRLDYVAPMNQEHAFALAVERLTGTQVPIRGQLIRVLYSEIGRILSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERACGARMHAAYFRPGGVHQDLPHQLVEDIGNWIDPFLKTVDDIDELLTGNRIFKQRNVDIGVVSLEDAWAWGFSGVMVRGSGAAWDLRRSQPYECYSDLEFDIPIGKNGDCFDRYLIRMIEMRQSARIMRQCVDRLLGDAKIGPVSSLDGKIVPPKRGEMKRSMEALIHHFKLYTEGYHVPAGEVYAAVEAPKGEFGVYLVSDGTNKPYRCKIRAPGYAHLQAMDFLCRGHQLADVSAVLGSLDIVFGEVDR
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit D 1, NADH dehydrogenase I subunit D 1, NDH-1 subunit D 1.
What is the protein family that this protein belongs to?
Belongs to the complex I 49 kDa subunit family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: ADDB_LEUCK
Sequence: MSLTVYMNHGQIDMRHALLSHAHEALNQDNNLTVYYIVPNHVKFDSEVDVLRRFARLTGQNPDTSLYAQSRLQVYSLSRLTWALLKDMATMQPNVIQGTGLFIMVSDILRDYAAQLPIFARMQSKAGFVTTLVAQLVELRASRISPEDLLTILNQESDDDTFLRQTLSGKLRDLAIVADALDKKMGHTYITQQEVLSFFATQLATTQLKNVAFYFDGFNGFTSPETQVMIELMARYPVTVALLGDVEKLGSQQPGDLFYKPMTTAQRLAQFTKIANQQVVWQVPTQARCLDESIISVMSAWEKLGEYRQFNSENKKTNLAAFVAENTMVEIQEVARRIRQLLVAQPDLRLRDILILARDLTPYTGHIPEVMQQFDLPYFLDTDQKMTNHPLVELLLNLLRPAKERFQYQQVMAILKTGLLRPYTDGSLVPEGDFFDIVSYLDNYLYANQPFERTWRDLDHPFTLFTVSEDEDDEDARVVLDDKTVNRRIETLRRFVIDAFDSLQQQLNQAQTMRQAATLIILWLEKYHVTEAILSQRDTLLAAGELSRSREGEEVWEMMTQTLDDIVAIDGDERFELEKFKAILVAGFEGATFSGIPNNLDQLTISEAGIVQSNDYQYLFFIGGTRNNLPAQLKSRALINDAERLIVQPALQENSTPKYLQNTAQQQMAEENLLFYGALTAATKNIVLSYPALDAGGQISDMSPFFKRLVDAFNITVNKVTATPATSQALLKYYVGSVRSTLGELVKIAASQQQTSAYQALRNTINQSEPERLERVLSAPNYKNQTETLKPELVQALFGETLNMSISQLESYYNNPLAYFLQYGLALKERLTNRLNVAQTGTLYHAVFEGVVQQLIIQQLSLRDISQKALQQLVADNMAEITAQPAYQMLQETGKMRATQHYLAKVSEILAVNMQRAARVNHAQPKAVERLFGFPNRQSLPALVVSTPQATVHLRGKIDRLDSQDPSQVYGTIIDYKSNGKHFDWGQAYDGRQMQLLTYWQAAQLSAEQLGIEAIGGAFFAKIAPEKLTIKDFKGDVRAMLRGEIKPEQFKYRGLFISEPAYIDSLETLAEGEGSQFYQLKKKANGELYANSDVISPEDFELLLKRNLDNIQRASAAILSGDFPLSPAEGSLQFTPFTDVLRFDRALGDQYKNNTPKNKSDILKLLKADEE
What is the function of this protein?
The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease.  Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination.  This subunit has 5' -> 3' nuclease activity.
What are the official names of this protein?
ATP-dependent helicase/deoxyribonuclease subunit B, ATP-dependent helicase/nuclease RexB.
What is the protein family that this protein belongs to?
Belongs to the helicase family. AddB/RexB type 2 subfamily.
Protein: LERK2_ORYSJ
Sequence: MAPLLFLPILQLLLLYCTKSAQAQLNISIGSSLTPQGINNSWISPTADFAFGFLAVDGNSSSYLLAVWFNKIADKTVIWYAKTSSNRQDDTIPIQVQAGSILKLADGALSLRDPSGNEVWNPRVTDVGYARMLDTGNFRLLGTDGATKWESFGDPSDTILPTQVLPLGTALHSRLLATDYSNGRFQLNVQDDGNLVLYLVAVPSAYYHDPYWASNTVGNGSQLVFNETGRIYFTLTNGSQINITSAGVDSMGDFFHRATLDTDGVFRQYIYPKSKQARSLWQEQWRAVDALPENICQTIQTKVGSGACGFNSYCTFDGTKNTTNCLCPQRYKFFDNERTYKGCRPDFEPQSCDLDETAAMVQYEMTPIDRINWPLSDYEQYSPIDETECRRLCVIDCFCSVAVFNKPSNTCYKKKLPLSNGNMDSSLQATVLLKVPRSTNSPSMISSGSSKWKKDKKYWILGSSLFFGSSVLVNFLLIFVLLFGTYCSITSRKKTQLSQLPSNSGLPSKIFTYRELEKATGGFHEVLGTGASGIVYKGQLQDECGTNIAVKKIEKLQQEAQKEFLVEVQTIGQTFHRNLVRLLGFCNEGTEKLLVYEFMSNGSLNTFLFNDSHPHWSLRVQVALGVSRGLFYLHEECNKQIIHCDMKPQNILLDDNFVAKISDFGLAKLLPVNQTQTNTGIRGTRGYVAPEWFKNIGITSKVDVYSFGVILLELVCCRKNVELEVADEEQTILTYWANDCYRCGRIDLLVASDDEAIFNIKKVERFVAVALWCLQEEPSMRPTMHKVMQMLDGAVQIPTPPDPSSYISSLA
What is the function of this protein?
Involved in resistance against the herbivorous insect brown planthopper (N. lugens, BPH).  Member of the BPH3 (BPH resistance locus 3) cluster which contains LECRK1, LECRK2 and LECRK3.
What are the official names of this protein?
G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2, OsLecRK2.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
What are the subcellular locations of this protein?
Membrane; Single-pass type I membrane protein.
Protein: WHIA_MOOTA
Sequence: MLMPLSFSLQTKEELARVKARHPCCRQAELVAFLRLGNLDGGQPGEETVLFTTPYPALARKVYSLAREFLACPVKVRNSRRQGKGRPVFRVVARARLKEIQDWLAGRAGVPEYPCCQAAYMRGAFLVTGSVNKPSGTHHLELIFPDAAMAGQMQGLMQQQELEPRLSRRQRGYVLYLKDSEQIIRALSLMGAYSAVLAYENVLIFKDMRNRVNRLVNCETANLTKTVETGLRQAENIRYLIATVGWDYLPPALREIAAVRLQHPEASLKELGEMLHPPVGKSGVNHRLRRLELIARQVRGQGREGYAPDDDLSRPRA
What is the function of this protein?
Involved in cell division and chromosome segregation.
What are the official names of this protein?
Probable cell division protein WhiA.
What is the protein family that this protein belongs to?
Belongs to the WhiA family.
Protein: MSS4_CAEEL
Sequence: MTTEYLDEERDLPLPRQKKGIDHTQTEPIRGFFGVKDMFAFENVGFTRSSEGKRYLVCGECEQGPVGFVDPVTEMNYVSPERLDVLPDVAAAAVEAGK
What is the function of this protein?
Guanine-nucleotide-releasing protein that acts on members of the sec4/ypt1/rab subfamily.
What are the official names of this protein?
Putative guanine nucleotide exchange factor MSS4 homolog.
What is the protein family that this protein belongs to?
Belongs to the DSS4/MSS4 family.
Protein: DAPEL_STRPN
Sequence: MLDLIQTRRDLHQIPEIGLEEFKTQAYLLDVIEKLTTGKDFVQIRTWRTGILVYLQGSQPERTIGWRTDIDGLPIVEQTGLPFASQHQGRMHACVHDFHMTIALGCLERALEEQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVELKQGGYLPVENNPALARELMDFFDEKDGIELIDIEPAMTGEDFGYLLSKVDGVMFWLGIDSPYALHHPQMSPKEEVLAIGVAAVSSFLKKKAAE
What is the function of this protein?
Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
What are the official names of this protein?
N-acetyldiaminopimelate deacetylase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M20A family. N-acetyldiaminopimelate deacetylase subfamily.
Protein: PYRB_PELUB
Sequence: MATKINKAIKISQKHLLGIQDLSINDVNFILEEAKSFIKLNQSKNKRLNVLSGKTQINLFFEPSTRTQSSFELAGKRLGADVMSMNMANSAIKKGETLIDTAMTLNAMHPDIIVIRHQDSGACNLLSQKVNCAVLNAGDGSREHPTQALLDALTIINRKKKIEGLRVAICGDITHSRVARSNIYLLNMLGAEVNIIAPSNLMPKEIEKFGVNTFTDMKKGLKDCDIVMMLRLQNERMTSSFLSSNREYYEYYGLTPDKLAHAKDDALIMHPGPMNRGIEIDTKLADDINRSVIKEQVELGVAVRMACLKIFCE
What are the official names of this protein?
Aspartate carbamoyltransferase, Aspartate transcarbamylase, ATCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
Protein: PER_COPCI
Sequence: MKLSLLSTFAAVIIGALALPQGPGGGGSVTCPGGQSTSNSQCCVWFDVLDDLQTNFYQGSKCESPVRKILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSNIELAFPANGGLTDTVEALRAVGINHGVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLGFDRNALTDCSDVIPSAVSNNAAPVIPGGLTVDDIEVSCPSEPFPEIATASGPLPSLAPAP
What are the official names of this protein?
Peroxidase.
What is the protein family that this protein belongs to?
Belongs to the peroxidase family. Ligninase subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: NUOK_SALNS
Sequence: MIPLTHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit K, NADH dehydrogenase I subunit K, NDH-1 subunit K.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 4L family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: VG56_BPLZ5
Sequence: MAHFNECAHLIEGVDKANRAYAENIMHNIDPLQVMLDMQRHLQIRLANDKPETNRHPDSLETAGEVLAWLRNQDDYIADETRELYTSLGGMSNGEKEASAVWKPWKKRYSEMQSKKIQDLSPEDQLEIKFELIDQFHFFMNKFIALGMSAEEIFKLYYLKNAENFARQDRGY
What are the official names of this protein?
dCTP pyrophosphatase, dCTPase, Deoxycytidine-triphosphatase.
Protein: RR4_TAKLE
Sequence: MSRYRGPRVKIIRRPGVSPGLTSKTLKSKSNYIDRSTSNKKVSQYRVRLEEKQKLRFHYGLTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNTIFRLGMAPTIPGARQLVNHGHISMNNNIIDIPSYNREPGDIITIRNKLESRSMISKNINLFQKLKMPSHLSFDLTGLQGSVNQMVNREWVNLKINELLVVEYYSRQV
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S4, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: GCST_CUTAK
Sequence: MTTLRRTPLAAVHESLGASFTDFAGWNMPVRYSSDLAEHHAVRKNAGIFDLSHMGEIRISGPDSGAALDYALAGKLSAVAEGRAKYSLLLTDEGGVVDDLVTYHLPDGDYLVVANAANAETDLAEFTKRCARFDVTVTDESAQTALVAVQGPTAVKIVLAALQKANTTLDSDEVRDVKYYRCLTGELDGFPVLVARTGYTGEDGYELYVPAKAAAHLWQLLMDAGGEDLTPCGLACRDTLRLEAGMPLYGHELGTDIHPSQAGLGRVVNFKKEGDFVGRCALENRDTTADRVLVGLTGEGRRAGRAGYAVVNEDKTVGAITSGILSPTLGHPIAMAFVDPDVAKIGTSLSVDVRGKALNTTVVELPFYKRS
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.
What are the official names of this protein?
Aminomethyltransferase, Glycine cleavage system T protein.
What is the protein family that this protein belongs to?
Belongs to the GcvT family.
Protein: VTS1_YARLI
Sequence: MNIPRFMPGHVLHTSEDIPQSESPLAGRRTRPVSEAFSSSYRHSDLGGYPPYGLGGSATAGLGSLSAGMGNLNLGGTTPGLQHLGGGLANTATMDSEKWLQDLELYNAILEEMATVSLDKDFKDELSSIEQWFGVLSDGERTAALYALLQQTNPVQIRFFITVLQKFGNMDFDGSPIGNSFENGAPQQQQQTSAQPSPMGQGAMGQAMTGGLGGLGGLHPHQTTHSNLNPNAHNPIYAPVGTFPSTPSHKHTSSLSTEPIGSRRSMIATPEHDLNAQIANTTAMKLAALSTVSNRASLDDRSKRSSFHQHTNSQESTPTKPGTPGGSPAPGAHSLATPMKGHHQTSSSSSITQLSGASSASPATDIKLLRDVSAWLRALRLHKYTECFKDMEWQDIVQLDDAQLEEKGVNALGARRKMLKVFEQVRDAQKDGTLGGV
What is the function of this protein?
RNA-binding protein involved in post-transcriptional regulation through transcript degradation.
What are the official names of this protein?
RNA-binding protein VTS1.
What is the protein family that this protein belongs to?
Belongs to the VTS1 family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol. Cytoplasm, P-body.
Protein: VG31_BPML5
Sequence: MTYPTNPLEAIGADGAFEIGGGDWSFGQDYTEQAIRALFTMPAVTMENALGLLEEHLLKLPLEALQGFKDMIPDWVEGAFDTVTGAVQAIMNALQDGPLFLKFAEFQLFLQRLLNNPAEVIGEIPQTLIDGLQDALNTVNNTIQTIVDMLLQALGITPEGELIDRIFDLSDEMEWLQTAASNAATGIQDTWNKFWGALTGRVPDQDQTVAEPAERIGELAGTTSANSSAIAELQRRLDNQQNAGGVAGGDDFERLNISGWDIRYSNGSSGRGYYRADGHQLVWMDEGNQQNTATFVRTNPADEKTATDYQKMTLVVGTISGEVQTVFPPQGGSHTRLWVRVNDNAPTVGITDGVFVEIGGVSKAQIGYRRNGNDTFVGSMVDCTWGAGSIFALTAGTANGAEKFEVSKNGPVLATWSDDGVVSAMGANYRRWGWEGQARNRNLGQGTPNSVTRVTITDNDPTGAGGGAVNVGGDVVGVLPIENGGTGASTASAARTALGIDDLVEDMSDVVRGSVEGLPLIPKIWVGTEAQYTALATKDQSTLYFRTA
What are the official names of this protein?
Gene 31 protein, Gp31.
Protein: RL28_YERPA
Sequence: MSRVCQVTGKRPMSGNNRSHAMNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVIDKKGIETVLAEIRARGEKY
What are the official names of this protein?
50S ribosomal protein L28.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL28 family.
Protein: CK068_MOUSE
Sequence: MAAAAAAVAGAGRGGGGGGGGGGAADPGQERSRARSWVGAERSEGRRMEPNEELEEEDSPGGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGWIAAYGQGYTPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLIHLSPGFKLDHAWAGIARAVVEGRLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIKCLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGNTRGSRVLDRANNVELT
What are the official names of this protein?
UPF0696 protein C11orf68 homolog, Basophilic leukemia-expressed protein Bles03, Protein WF-3.
What is the protein family that this protein belongs to?
Belongs to the UPF0696 family.
Protein: ADH1B_PANTR
Sequence: MSTAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVLTF
What is the function of this protein?
Catalyzes the NAD-dependent oxidation of all-trans-retinol and its derivatives such as all-trans-4-hydroxyretinol and may participate in retinoid metabolism.  In vitro can also catalyzes the NADH-dependent reduction of all-trans-retinal and its derivatives such as all-trans-4-oxoretinal.  Catalyzes in the oxidative direction with higher efficiency.  Has the same affinity for all-trans-4-hydroxyretinol and all-trans-4-oxoretinal.
What are the official names of this protein?
All-trans-retinol dehydrogenase [NAD(+)] ADH1B, Alcohol dehydrogenase 1B, Alcohol dehydrogenase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the zinc-containing alcohol dehydrogenase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUVB_SYNE7
Sequence: MAIVSSKSPDPAERRSQAKTKPSVSEPQDSLVRPQAAPEESQRPEDQIRPQRLADYIGQPELKDVLGIAIAAAKSRQESLDHLLLYGPPGLGKTTMALVLATEMGVQCRITTAPALERPRDIVGLLVNLQPGDVLFIDEIHRLPKVTEEILYPAMEDFRLDITIGKGQSARTRSITLQPFTLVGATTQIGALTSPLRDRFGLVQRLRFYEVEALTDIVQRTARLLNTPLDQAGAEEIAKRSRGTPRIANRLLRRVRDYAAVKAPGPITGAIAATALELYNVDPCGLDWTDRRLLSHLIENFGGGPVGLETLAAATGEDAQTVEEVYEPYLLQIGYLQRTPRGRVATPAAWRHLGYEPPQASGQLTLQQLLTEPET
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time.  Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange.  Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration.  The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration.  Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvB.
What is the protein family that this protein belongs to?
Belongs to the RuvB family.
Protein: DNAA_RHOPB
Sequence: MTNIEQDRWSRVKGRLRSSVGEDVYSSWFARMDLESVQPESVHLSVPTRFLKSWIQTHYSDRVLSCWQAEMPQVHRVDLTVRTAMRCAAPAKDAPAHAEPRRDDGRPAPELRATAIAPVSATHEALGGSPLDPRLTFGSFVIGRSNTLAHAAARQVAEGRRGDPVMFNPLYIHSGVGLGKTHLLQAVTWAGNSGTERKVLYLTAEKFMYGFVAALKSQTALAFKEALRGIDVLVIDDLQFLQGKTTQAEFCHTLNALIDAGRQVVIAADRPPSDLESLDERVRSRLAGGLVVEMASLGEDLRLGILKSRVTAARAHHASFDVPLPVLEYLARTITHNGRDLEGAINRLLAHSKLNAQPVTLEMAEREIRDLVRPQEPKRIKIEDIQRVVARQYNVSRSDLLSSRRTANVVRPRQVAMYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRKIEGLVAKDTALSDEVELLKRQLQE
What is the function of this protein?
Plays an important role in the initiation and regulation of chromosomal replication.  Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'.  DnaA binds to ATP and to acidic phospholipids.
What are the official names of this protein?
Chromosomal replication initiator protein DnaA.
What is the protein family that this protein belongs to?
Belongs to the DnaA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS7_BACC3
Sequence: MPRKGPVAKRDVLPDPMYNSKLVTRLINKMMVDGKKGKSQTILYNAFDIVSERTGKEPMEVFEQALKNIMPVLEVRARRVGGANYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEERLANEILDAANNAGASVKKREDTHKMAEANKAFAHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: RL37_THEPD
Sequence: MVKGTTSFGKRGRNITHIRCRRCGHHSFNVRKGYCAHCGFGRSKRIRRYSWQNKKAVTRIRLV
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L37e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL37 family.
Protein: TIC62_ARATH
Sequence: MEGTCFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRASSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPVPDSTSNVPVVEVKQVEEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPTDSDTDKSSTVAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAIYADLKPPTSPTPASTGPKEAASVEDNSELPGGNNDVLKTVDGNLNTIPPSTPEAVPVVSSAIDTSLASGDNTAQPKPRPLSPYTMYADMKPPTSPLPSPVTNH
What is the function of this protein?
Involved in protein precursor import into chloroplasts.  Part of the redox regulon consisting of TIC32, TIC 55 and TIC62 (PubMed:12426385).  Acts as a membrane anchor of LFNR1 and LFNR2.  Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids (By similarity).
What are the official names of this protein?
Protein TIC 62, chloroplastic, Translocon at the inner envelope membrane of chloroplasts 62, AtTIC62.
What are the subcellular locations of this protein?
Plastid, chloroplast inner membrane; Peripheral membrane protein. Plastid, chloroplast stroma. Plastid, chloroplast thylakoid. Note=Shuttles between the membranes and the stroma, depending on the redox state of the plastidic NADP(+)/NADPH pool.
Protein: PYRG_ALKEH
Sequence: MTRYIFITGGVVSSLGKGITAASLGTILQARGLSVSMTKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFVRTTMTRNNNYTTGRIYESVIRKERRGEYLGGTVQVIPHITDEIKRSIQQGADDADIALIEIGGTVGDIESLPFLEAIRQMGAELGRGRCLFMHLTLVPFIGAAGEMKTKPTQHSVKELRSIGIQPDILVCRASQRIPEEERRKIALFTNVEPRAVVSCLDVDNIYKIPEVLHRQGLDNIVAEKLGLELPPASLQDWQRVVEAMQNPEGEVTIAMVGKYVDLTDAYMSLNESLRHAGIQTRHRVNIRYIDSEELEREGTHALDGVDAVLVPGGFGERGVEGKILAARYARERKVPYLGICLGMQVAVIEYARNVAGLEGAHSTEFTRHPHHPVIGLITEWMTDEGTVEQRSEDSDLGGTMRLGAQPCRLTEGSLARQVYGKDVVEERHRHRYEFNNHYLEALEAAGLRFSGWSHDRKLVEVVEQPDHPWFLACQFHPEFTSTPRDGHPLFAAFVRAAIAHRG
What is the function of this protein?
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.  Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
What are the official names of this protein?
CTP synthase, Cytidine 5'-triphosphate synthase, Cytidine triphosphate synthetase, CTP synthetase, CTPS, UTP--ammonia ligase.
What is the protein family that this protein belongs to?
Belongs to the CTP synthase family.
Protein: TIP43_MAIZE
Sequence: MGKLTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTHDLLPQQDP
What is the function of this protein?
Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
What are the official names of this protein?
Aquaporin TIP4-3, Tonoplast intrinsic protein 4-3, ZmTIP4-3, ZmTIP4;3.
What is the protein family that this protein belongs to?
Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
What are the subcellular locations of this protein?
Vacuole membrane; Multi-pass membrane protein. Note=Tonoplast.
Protein: GLNA_HEBCY
Sequence: MAYRYHNDLLAPYLALPQGDKIQAEYVWVDGDGGLRSKTTTVSKKVTDIGSLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNSDGTPNRTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYSGINISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWAVKVSFHPKPLQGDWNGAGCHTNYSTKAMREPGGMKVIEEAIEKLSKRHDEHIAVYGEDNDLRLTGRHETGHIGAFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTSIIVETTLLNA
What are the official names of this protein?
Glutamine synthetase, GS, Glutamate--ammonia ligase.
What is the protein family that this protein belongs to?
Belongs to the glutamine synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMA_CHESB
Sequence: MSMDGLPPLRDVIERHGLFARKALGQNFLLDLNLTRRIARTAGGLDNATVLEVGPGPGGLTRALLMEGARRVVAIERDERCIAALEEIAAHYPGRLEIVAGDAMKADFAALAGNSGDVKIVANLPYNIGTELLIRWLTPQTWPPFYESMTLMFQREVAERIVAKPGSSHYGRLGVLAGWRTEARIAFDVPPQAFTPPPKVISSVVKIVPRADPLTVEVGRLARTTEAAFGQRRKMLRQSLRSVGGEALLEKAGIDGTRRAETLSVEEFVRLAREI
What is the function of this protein?
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle.  May play a critical role in biogenesis of 30S subunits.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase A, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase, 16S rRNA dimethyladenosine transferase, 16S rRNA dimethylase, S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.