PharMolix/UniProtQA huggingface dataset:
Protein: NB_MYCSK
Sequence: MTAPQEPEDAAGSIFSTSGDRAVADAAERAKVTASRNIPVFDDLPLPADTANLRKGVDFNDALLALLPLVGVWRGEGEGRGPHGDYRFGQQIVVSHDGGDYLNWEARSWRLTESGEYDRVGLRETGFWRFVSDPADPSESQAIELLLAHSAGYIELFYGHPRNQSSWELVTDALARSKSGMLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLARYVG
What is the function of this protein?
Heme-binding protein able to scavenge peroxynitrite and to protect free L-tyrosine against peroxynitrite-mediated nitration, by acting as a peroxynitrite isomerase that converts peroxynitrite to nitrate.  Therefore, this protein likely plays a role in peroxynitrite sensing and in the detoxification of reactive nitrogen and oxygen species (RNS and ROS, respectively).  Is able to bind nitric oxide (NO) in vitro, but may act as a sensor of peroxynitrite levels in vivo.
What are the official names of this protein?
Peroxynitrite isomerase, Ferric nitrobindin, Nb(III).
What is the protein family that this protein belongs to?
Belongs to the nitrobindin family.
Protein: PYRG_GLOVI
Sequence: MTKYVFVTGGVVSSIGKGIVAASLGRLLKSRGYSVTILKLDPYINVDPGTMSPFQHGEVFVTNDGAETDLDLGHYERFTDTDVSKLNNVTTGSIYQSVINKERRGDYMGGTVQVIPHITNEIKERIRRVAHDTNPDVVIVEVGGTVGDIESLPFLEAIRQFRKDVGRENVLYIHVTYILHIPTAGEMKTKPTQHSVKELRSIGIQPDILVCRSDRPLSVGIKDKISEFCDVPVRAVITCQDAQTIYAVPLNLEREGLAHQAITLLGLEQRQPDLRDWEILVDRICNPSRAVTIAIVGKYVRLSDAYISVVEALRHAAVALDAEVKVEWVSAEAVEERGAGYFLNNVDGAVVPGGFGSRGIDGKVSAIEFSRGHRLPFLGLCLGMQCSVIEWARHTAGLAANSTEFDPQTPNPVISLLPEQADVVDLGGTMRLGLWPCRLQEGTLAHRLYGETLVYERHRHRYEFNNAYRKAIIEAGFQISGASPDERLVEIIELADHPYFIATQFHPEFKSRPNKPHPLFFGLVRAALERKETERLPASPAPVPLPSAV
What is the function of this protein?
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.  Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
What are the official names of this protein?
CTP synthase, Cytidine 5'-triphosphate synthase, Cytidine triphosphate synthetase, CTP synthetase, CTPS, UTP--ammonia ligase.
What is the protein family that this protein belongs to?
Belongs to the CTP synthase family.
Protein: CML2_ARATH
Sequence: MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGMVNFKEFKQMMRGGGFAALSSN
What is the function of this protein?
Potential calcium sensor that is required for pollen tube attraction for ovule fertilization.
What are the official names of this protein?
Calmodulin-like protein 2, Protein UNFERTILIZED EMBRYO SAC 14.
What is the protein family that this protein belongs to?
Belongs to the calmodulin family.
Protein: HCAF_ECO57
Sequence: MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
What is the function of this protein?
Part of the multicomponent 3-phenylpropionate dioxygenase.  Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively.
What are the official names of this protein?
3-phenylpropionate/cinnamic acid dioxygenase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family.
Protein: YBEH_ECOLI
Sequence: MLVAAGQFAVTSVWEKNAEICASLMAQAAENDASLFALPEALLARDDHDADLSVKSAQLLEGEFLGLYGEKVNVT
What is the function of this protein?
Pseudogene resulting from a nucleotide deletion that introduces a premature stop codon at position 66.  This is the N-terminal fragment.  The intact protein (AC A0A140NCB4) hydrolyzes deaminated glutathione (dGSH, 2-oxoglutaramate) to alpha-ketoglutarate (alpha-KG) and cysteinylglycine, has less activity against alpha-ketoglutaramate (a-KGM) and no activity on glutathione or L-glutamine (By similarity).  May function as a metabolite repair enzyme (By similarity).
What are the official names of this protein?
Putative protein YbeH.
What is the protein family that this protein belongs to?
Belongs to the carbon-nitrogen hydrolase superfamily. NIT1/NIT2 family.
Protein: AROE_COXB1
Sequence: MDKYAVIGNPVEHSLSPVIFQAFEKQTNHSFDYLKIKAPVNGFAAAVKKFHDEGGKGANITLPFKEEAYQLADKRCQEANEAHAASALQFREDGTIYAVNYDGLGLVQDLTRNHNITLTQKSILIVGAGGATRGILGPLLNAAPEKIVIVNRTPSKAHALAKIFHLRGEIQGGGFDELEPMRYDVIIHATSLGHQGKFPPLPDGLVGSQSCCYDLSYGKIASPFLQWAKDQGAKYNFDGLGMLVEHNAAVFYLWFGIYPDTNPVIEMLQAHL
What is the function of this protein?
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids.  Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
What are the official names of this protein?
Shikimate dehydrogenase (NADP(+)), SDH.
What is the protein family that this protein belongs to?
Belongs to the shikimate dehydrogenase family.
Protein: CRLF_DICDI
Sequence: MKDIILIYMICAPISMIGSLFIIITWLLYAKLKNSGSNFIFFQAISDFFFTSKYIITIIFYYINIPQFSDETSSTDTNPYCFSLGLFSQFFGQATIMWSYTMTVKVFHSYFEMKKKNNNNNIGSNNIGGGGGGNNSNKQNSIDKTLKWYHLFVWGFCLVNATIIGISKQYGPSSTGCWIVGANNPYRFFELVPLYFTITTSIIILILILVKMKKSKPSSLLPTESMRYNQQAREFKIQLMKFVLIFIIFWLPATVLRTLEYFGIEKTFFILLDAVSVSLQALANSLVWATSPQFLKLMKRKVVNKPNKQMEREYLINK
What is the function of this protein?
Receptor for cAMP.
What are the official names of this protein?
Cyclic AMP receptor-like protein F.
What is the protein family that this protein belongs to?
Belongs to the G-protein coupled receptor 5 family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: SLDB_GLUOX
Sequence: MPNTYGSRTLTEWLTLVLGVVIILVGLFFVIAGADLAMLGGSVYYVICGIPLVAGGVFMLMGRTLGAFLYLGALAYTWVWSLWEVGFSPVDLLPRDFGPTLLGILVALTIPVLRRMETRRTLRGTV
What is the function of this protein?
Catalyzes the oxidation of glycerol to glycerone.  Also acts, more slowly, on a number of other polyols including D-sorbitol, D-arabinitol, D-mannitol, meso-erythritol, adonitol and propylene glycol (By similarity).
What are the official names of this protein?
Glycerol dehydrogenase small subunit, D-arabitol dehydrogenase small subunit, ARDH, D-sorbitol dehydrogenase subunit SldB, SLDH, Gluconate/polyol dehydrogenase small subunit.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: YEEX_ECOL5
Sequence: METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK
What are the official names of this protein?
UPF0265 protein YeeX.
What is the protein family that this protein belongs to?
Belongs to the UPF0265 family.
Protein: NGFV2_HOPST
Sequence: MSMLCYTLIIAFLIGIWAAPKSEDNVPLGSPATSDLSDTSCAQTHEGLKTSRNTDQRHPAPKKAEDQELGSAANIIVNPKLFQKRRFQSPRALFSTQPPPLSRDEQSVEFLDNEDALNRNIRAKRENHPVHNRGEHSVCDSISVWVTNKTKATDIKGNMVTVMVDVNLNNEVYKQYFFETKCRNPNPNLLQSECRGIDSRLWNSYCTRTQTFVKALTMEGNQASWRFIRIDTACVCVIIRKTDNL
What is the function of this protein?
Nerve growth factor is important for the development and maintenance of the sympathetic and sensory nervous systems.  It stimulates division and differentiation of sympathetic and embryonic sensory neurons as well as basal forebrain cholinergic neurons in the brain.  Its relevance in the snake venom is not clear.  However, it has been shown to inhibit metalloproteinase-dependent proteolysis of platelet glycoprotein Ib alpha, suggesting a metalloproteinase inhibition to prevent metalloprotease autodigestion and/or protection against prey proteases (By similarity).  Binds a lipid between the two protein chains in the homodimer.  The lipid-bound form promotes histamine relase from mouse mast cells, contrary to the lipid-free form (By similarity).
What are the official names of this protein?
Venom nerve growth factor 2, v-NGF-2, vNGF-2.
What is the protein family that this protein belongs to?
Belongs to the NGF-beta family.
What are the subcellular locations of this protein?
Secreted.
Protein: YECR_ECOLI
Sequence: MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL
What are the official names of this protein?
Uncharacterized protein YecR.
Protein: NRFC_ECOLI
Sequence: MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ
What is the function of this protein?
Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes.
What are the official names of this protein?
Protein NrfC.
Protein: RSGA_GRAFK
Sequence: MQGTVYKSTGSWYQVKAEDGKFYECRIKGKFRIQGIKSTNPVAVGDEVSFDLEEGVEEKTGVIKKIKERENYIIRKSVNLSKQTHIIASNIDQVFLLITLNNPPTLTTFIDRFLVTAEAYDITAVLLFNKVDTYSIEELAEVKYLAELYRSAGYECIGISAKNGKNVDKVKDKMIGNTSMISGHSGTGKSTLINAIEPALDLKTSEISRQHSQGQHTTTFAEMFDLSFNARIIDTPGIKGFGVVDMDREEIGDYFPEFFERKQDCKFHNCLHIEEPKCAIKDSLEEGEIAWSRYKSYLQIMEGEEDNYRVDQYQK
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Helps release RbfA from mature subunits.  May play a role in the assembly of ribosomal proteins into the subunit.  Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit.
What are the official names of this protein?
Small ribosomal subunit biogenesis GTPase RsgA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FER2_HALMA
Sequence: MVEFLNFEVLEDHGWALQDEDLFAKAADANLQSTDFGRFYVDPNDTLLEAAEKNGFAWPFACRGGACTNCAVAVVDGEMPSPASHILPPELTEKGIRLSCIAAPVSDDAKIVYNLKHLPEVSELLLPASRFEQASSTD
What is the function of this protein?
Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
What are the official names of this protein?
Ferredoxin-2.
What is the protein family that this protein belongs to?
Belongs to the 2Fe2S plant-type ferredoxin family.
Protein: DDX5_PONAB
Sequence: MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWDLDEPPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGAYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAAAPMIGYPMPTGYSQ
What is the function of this protein?
Involved in the alternative regulation of pre-mRNA splicing; its RNA helicase activity is necessary for increasing tau exon 10 inclusion and occurs in a RBM4-dependent manner.  Binds to the tau pre-mRNA in the stem-loop region downstream of exon 10.  The rate of ATP hydrolysis is highly stimulated by single-stranded RNA.  Involved in transcriptional regulation; the function is independent of the RNA helicase activity.  Transcriptional coactivator for androgen receptor AR but probably not ESR1.  Synergizes with DDX17 and SRA1 RNA to activate MYOD1 transcriptional activity and involved in skeletal muscle differentiation.  Transcriptional coactivator for p53/TP53 and involved in p53/TP53 transcriptional response to DNA damage and p53/TP53-dependent apoptosis.  Transcriptional coactivator for RUNX2 and involved in regulation of osteoblast differentiation.  Acts as transcriptional repressor in a promoter-specific manner; the function probably involves association with histone deacetylases, such as HDAC1.  As component of a large PER complex is involved in the inhibition of 3' transcriptional termination of circadian target genes such as PER1 and NR1D1 and the control of the circadian rhythms (By similarity).
What are the official names of this protein?
Probable ATP-dependent RNA helicase DDX5, DEAD box protein 5.
What is the protein family that this protein belongs to?
Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.
What are the subcellular locations of this protein?
Nucleus. Nucleus, nucleolus. Cytoplasm. Note=During the G0 phase, predominantly located in the nucleus. Cytoplasmic levels increase during the G1/S phase. During the M phase, located at the vicinity of the condensed chromosomes. At G1, localizes in the cytoplasm.
Protein: PSAJ_PINTH
Sequence: MQDLKTYLSTAPVLAILCVSFLAALLIEINRFFPDALFLSLSFS
What is the function of this protein?
May help in the organization of the PsaE and PsaF subunits.
What are the official names of this protein?
Photosystem I reaction center subunit IX, PSI-J.
What is the protein family that this protein belongs to?
Belongs to the PsaJ family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: RL21A_SCHPO
Sequence: MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYDTTI
What are the official names of this protein?
60S ribosomal protein L21-A.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL21 family.
Protein: RL28_BACCN
Sequence: MARVCAITGRKARSGNSRSHAMNATKRKWGANLQKVRVRINGKVQRVYVSARALKSGKIERV
What are the official names of this protein?
50S ribosomal protein L28.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL28 family.
Protein: XLNR_ASPKA
Sequence: MSTPSIPQFPSPFSPFSSGSQSTGMAPSQTVGLDTLAEGSQYVLEQLQLSRDAAGTGAGDGATSTSLRNSMSHAKDQPLFDDERNQSAGSGFKNTLQRDPLVEARSAIRKNSSSAPVRRRISRACDQCNQLRTKCDGQHPCAHCIEFGLTCEYARERKKRGKASKKDLAAAAAAATHGSNGHSGQANASLMAERTSEDSRPAQDVNGRYDSTFESHHISSQPSHMQHANNAGISGLHDSQTAPSHSQPSLGTTIDAMHLGHFNTLNDSGRPAMSMSDLRSLPPSVLPPQGLSSGYNASAFALVNPQEPGSPANQFRLGSSAENPTAPFLGLSPPGQSPGWLPLPSPSPANFPSFSLHPFSSTLRYPVLQPVLPHIASIIPQSLACDLLDVYFHSSSPSHLSPSSPYVVGYIFRKQSFLHPTKPRLCSSGLLASMLWVAAQTSEAPFLTSPPSARGRVCQKLLELTIGLLRPLVHGPATGEASPNYAANMVINGVALGGFGVSMDQLGAQSSATGAVDDVATYVHLATVVSASEYKAASMRWWTAAWSLARELKLGRELPPNVSHARQDGERDGDGEADRRHPPTLITSLGHGPGSSGINVTEEEREERRRLWWLLYATDRHLALCYNRPLTLLDKECGGLLQPMNDDLWQVGDFAAAAYRQVGPPVECTGHSMYGYFLPLMTILGGIVDLHHAENHPRFGLAFRNSPEWERQVQDVTRQLDTYGRSLKEFEARYTSNLTLGTAENEPAVEGAHLDHTSPSGRSSSTVGSRVSGSIMHTRMVVAYGTHIMHVLHILLAGKWDPVNLLEDHDLWISSESFVSAMSHAVGAAEAAAEILEHDPDLSFMPFFFGIYLLQGSFLLLLAADKLQGDASPSVVRACETIVRAHEACVVTLNTEYQRTFRKVMRSALAQVRGRIPEDFGEQQQRRREVLALYRWSGDGSGLAL
What is the function of this protein?
Transcriptional activator of the xylanolytic system.  Involved in the regulation of extracellular cellulolytic and xylanolytic genes and in the regulation of the intracellular activities of D-xylose catabolic genes in the pentose catabolic pathway (PCP) in response to the presence of D-xylose (By similarity).
What are the official names of this protein?
Xylanolytic transcriptional activator xlnR, Xylanase regulator.
What is the protein family that this protein belongs to?
Belongs to the xlnR/xlr1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: ACT11_ARATH
Sequence: MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
What is the function of this protein?
Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.  Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.  This is considered as one of the reproductive actins.
What are the official names of this protein?
Actin-11.
What is the protein family that this protein belongs to?
Belongs to the actin family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: RFTRM_RICPR
Sequence: MQYSIKQILSNANDKLNKIGINLPGLEARILLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLAHEPIAYIIGVKEFYSREFIVNKHVLIPRIDTEVLVDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGCIAISLLCELPNTNIIATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIVSNPPYISHTEKLKMAIETINYEPSIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGFSQAAKVSKIFLNYGYNIDYIYRDLQSHNRVIEISPINLNRSYARRIGKSLSKMQQKLLDNELPKYLFSKEKFKSEKRKVFLEIGFGMGEHLINQAKINPDTLFIGVEVYLNGVANVLKHSAQHNITNFLLFPNNLDLILNDLPNNSLDGIYILFPDPWIKNKKKKKRIFNKERLKILQNKLKNNGNLVFASDIENYFYEAMALIRQNGNFEIIHNDDYLQPHDNYIITKYHQKAINANRTAKFMILQHALTDH
What is the function of this protein?
Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
What are the official names of this protein?
Bifunctional methyltransferase.
What is the protein family that this protein belongs to?
In the N-terminal section; belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
Protein: RUVC_YERP3
Sequence: MAIVLGIDPGSRVTGYGVIRQQGRQLTYLGSGCIRTVVDDMPTRLKLIYAGVTEIITQFQPDFFAIEQVFMAKNPDSALKLGQARGAAIVAAVNLNLPVSEYAARQVKQTVVGTGAAEKSQVQHMVRSLLKLPANPQADAADALAIAITHCHLSQNTLRLGNDQMTLSRGRIR
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair.  Endonuclease that resolves HJ intermediates.  Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction.  The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'.  Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange.  HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Crossover junction endodeoxyribonuclease RuvC, Holliday junction nuclease RuvC, Holliday junction resolvase RuvC.
What is the protein family that this protein belongs to?
Belongs to the RuvC family.
Protein: FLPA_THEVO
Sequence: MSKGDRPGLLLPFENKRIIRIRNSVYTETETPQRVYGEEITKINNRTYREWDPRRSKPAAAILNGLRRFPIRENDSVLYLGASTGTTISHISDICPAGTIYGVEVSYEPFSKLLDLAKKRNNLYPILEDANSPEKYSFFIEHVDVMYQDISQRNQIQIFKNNVNTFNPKRGFLVLKIRSVKSTEDSRSILNTAMDQLSVYHLKEVINLKPYDTDHYLITLDT
What is the function of this protein?
Involved in pre-rRNA and tRNA processing.  Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA.  Site specificity is provided by a guide RNA that base pairs with the substrate.  Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA.
What are the official names of this protein?
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. Fibrillarin family.
Protein: RL18_STAES
Sequence: MISKIDKNKVRLKRHARVRTKLSGTAEKPRLNVYRSNKHIYAQIIDDVKGVTLAQASSQDKDIANTSASKVDLATTVGQEIAKKANDKGIKEIVFDRGGYLYHGRVKALADAARENGLEF
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: CYNS_SCLS1
Sequence: MSDKSNIATLDSTLIDRLPSSSKTLFEAKATKSLTFESIAQELGRSEVAVAALFYGQAQASAADIEKLSQILEVPQSKLEAELGGFPDRGRAGPMPPVEPLIYRLYEIVQNYGYAYKAVLNEKFGDGIMSAISFSTKVEKEVDEQGNNWAVITLRGKWLPFSRF
What is the function of this protein?
Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide.
What are the official names of this protein?
Cyanate hydratase, Cyanase, Cyanate hydrolase, Cyanate lyase.
What is the protein family that this protein belongs to?
Belongs to the cyanase family.
Protein: VIAA_SALCH
Sequence: MLTLDTLNTMLAVSEEGMVEEMILALLASPQLVIFFEKFPRLKNAVTADLPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILALLHRLHSPYAAQAKQLTESNSTFTPALHTLFLQRWRLSLVVQATTLNQQLLEEEREQLLSDVQERMTLSGQLEPTLAENDNAAGRLWDMSTGQLKRGDYQLIVKYGEFLAAQPELMQLAEQLGRSREAKSVPKKDAPMETFRTLVREPATVPEQVDGIQQGDDILRLLPPELAALGITELEYEFYRRLVEKQLLTYRLHGEAWREKVTERPVVHQDVDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADNRRCFIMLFSTDVVRYELSGPEGIEQAIRFLSQRFRGGTDIASCFRAIIERMQGREWFDADAVVISDFIAQRLPDDVVSKVGELQRLHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR
What are the official names of this protein?
Protein ViaA, VWA domain protein interacting with AAA ATPase.
What is the protein family that this protein belongs to?
Belongs to the ViaA family.
Protein: T431_STAAM
Sequence: MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS
What is the function of this protein?
Involved in the transposition of the insertion sequence.
What are the official names of this protein?
Transposase for insertion sequence-like element IS431mec.
Protein: SYL_STRE4
Sequence: MTFYNHKAIEPKWQAFWADNHTFKTGTDASKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREINTTDPSYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLADLEEVDWPESIKDMQRNWIGKSTGANVTFKVKDTDKDFTVFTTRPDTLFGATYAVLAPEHALVDSITTAEQAQAVAEYKRQASLKSDLARTDLAKEKTGVWTGAYAINPVNGKEMPIWIADYVLASYGTGAIMAVPAHDERDWAFAKQFNLEIIPVLEGGNVDEAAYTEDGIHINSDFLDGLDKACAIAKMVAWLEETGVGHEKVSYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPEQDLPLVLPVTKDIRPSGTGESPLANLTDWLEVTREDGVKGRRETNTMPQWAGSSWYYLRYIDPHNDEQLADKDLLKQWLPVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVDKRDGSFFHMETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGARKFLDRVYRLITTKEIVAENSGALDKAYHETVKAVTEQIEGMKFNTAIAQLMIFVNAANKEDELYVAYAKGFVQLLAPFAPHLGEELWQILTASGQSISYVAWPTHDDSKLVENDVEIVVQIKGKVKAKLVVAKDLSREELEKVALAHDKIQAEIAGKEVAKVIVVPNKLVNIVVK
What are the official names of this protein?
Leucine--tRNA ligase, Leucyl-tRNA synthetase, LeuRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: QUEC_RICM5
Sequence: MKKKAVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQKIQGLIKDYNVKQHRVINIDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARNTIFLSYALGVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTKEQIIKKGLELGVDYSKTISCYDPTEAGLSCGQCLSCIARLDAFKKNNVQDPIKYV
What is the function of this protein?
Catalyzes the ATP-dependent conversion of 7-carboxy-7-deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
What are the official names of this protein?
7-cyano-7-deazaguanine synthase, 7-cyano-7-carbaguanine synthase, PreQ(0) synthase, Queuosine biosynthesis protein QueC.
What is the protein family that this protein belongs to?
Belongs to the QueC family.
Protein: XYND_BACSU
Sequence: MRKKCSVCLWILVLLLSCLSGKSAYAATSTTIAKHIGNSNPLIDHHLGADPVALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWAGASWAPSIAVKKINGKDKFFLYFANSGGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTIDAPFMFEDSGLHKYNGTYYYSYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFLKNPGAFFGGGGNNHHAVFNFKNEWYVVYHAQTVSSALFGAGKGYRSPHINKLVHNADGSIQEVAANYAGVTQISNLNPYNRVEAETFAWNGRILTEKSTAPGGPVNNQHVTSIQNGDWIAVGNADFGAGGARSFKANVASTLGGKIEVRLDSADGKLVGTLNVPSTGGAQTWREIETAVSGATGVHKVFFVFTGTGTGNLFNFDYWQFTQR
What is the function of this protein?
Cleaves arabinose units from O-2- or O-3-monosubstituted xylose residues, thereby assisting in arabinoxylan (AX) and short-chain arabinoxylo-oligosaccharide (AXOS) degradation.  Is more active on wheat bran AXOS than on wheat water-extractable AX and rye water-extractable AX.  Does not display endoxylanase, xylosidase or arabinanase activity.
What are the official names of this protein?
Arabinoxylan arabinofuranohydrolase, AXH, AXH-m2,3, AXH-m23, Alpha-L-arabinofuranosidase, AF.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 43 family.
What are the subcellular locations of this protein?
Secreted.