PharMolix/UniProtQA huggingface dataset:
Protein: SSRP_WOLPM
Sequence: MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRERKVNISDAYVVEKNSEVWLHNMHIAEYKAANRKNHKPKRERKLLLHKKEINKLIGQIKTAGITVVPLSVYFNDKGFAKTKIAIVKGKKLYDKRATIKQREWDREKSRLSKNNL
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: ABCB7_DICDI
Sequence: MTRKSNYNYLDEDNIEDESPIGLGTSPIEFNLDKENKNKKRNSVKFNLDTPLPIINNKSSQDNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNKNNKNKINNSLNSITPYLVDYKDDFDFKRSVYDFDDVDYLEEDSFDEHSFYKTSYSTRRCIYRILTYIRPQIWYFVFAFLALSITTLCQLALPYCFANGIQEAIRVNLTVNSVNSTDNNIIITPTPTPNITTTTTNPTVLESITSKYTSLFGNTEYDFKWIIIIVLVQTPFLFARYLLFTMAGFSVVTKLKRDLFKSLLTQEVSYFDSNRTGDLKAVIASDSSILQNCITVSLSTLVRCSLQLIGGLLILVFLSWKVTLLMISFLVILLISFLVFKKWIHPKYNYIQEKLVNIGLIIDDSIGNIKEIRLLNAESKELRSFETELEILHRSSRSFVLMNAFWISFGSLLVMGTIIGIYGFAMSQTLSNSILLLQFILYSLMITASMNGLIGSINEIQKLISSSKRIFSLIDRKPIVHFQGGITPSTDSNISFDNVYFNNNNNNSNNNNNNNNNNKNNNGMILSNVSFIVNKGQWLSLVGPSQSKEFIFSLIQGLYYPTRGTVFIGRIDTKVLDLYFFRSRLFTISPLQTVIFDGTVEQNIRYGLSHLSTQNIIDASKKANLHDFVIGLPHGYDSMIGKNNFFDPIQILKISIARAFLRNPSVLLLDETTLPFDSKEIEDSIELLVQNKTVIAIANKLSTLKRSNNILVFDDNRIIERGTHSELSQKSTSFYVTSVLNSINNKYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNNNKIEIYLFLI
What are the official names of this protein?
ABC transporter B family member 7, ABC transporter ABCB.7.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. ABCB family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: RL30_MYCUA
Sequence: MSEATNQLKITQVRSTIGARWKQRESLRTLGLRRIRHTVVRDDNAQTRGLIAVVRHLVEVEPAQNGTGGKAQ
What are the official names of this protein?
50S ribosomal protein L30.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL30 family.
Protein: HCP_THEPX
Sequence: MSMFCYQCQEASQGIGCTVRGVCGKTDDVANLQDLLIFTLKGISFLNLKAREAGVNKEKTDRFLFEGLFSTITNVNFDRNFFINKIKEAVALREEIKEDLKKAGIEVDESCEAINWVYDTDEDIEAIAAEVGVLSTKDEDIRSLRELITYGVKGMAAYAYHAYQLGYKDDNIFRFMEKALAKVLDDSLTADDYVALALEAGKYGVDTMALLDKANTSTYGHPEITKVNIGVRNNPGILISGHDLKDLEQLLEQTAGTGVDVYTHGEMLPAHYYPAFKKYPHFVGNYGNAWWQQDKEFELFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFEGVKYIPEGPDGKKDFSEIIEHAKRCKPPVEIERGEIIGGFAHNQVLELADKIVEAVKTGAIKRFFVMAGCDGRMKSRTYYTEFAKALPKDTVILTAGCAKYRYNKLNLGDINGIPRVLDAGQCNDSYSLAVIAMKLKEVFGLNDINKLPISYNIAWYEQKAVIVLLALLYLGVKNIHLGPTLPAFLSPNVTKVLVDKFGIGGITNVEDDMKMFMGE
What is the function of this protein?
Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
What are the official names of this protein?
Hydroxylamine reductase, Hybrid-cluster protein, HCP, Prismane protein.
What is the protein family that this protein belongs to?
Belongs to the HCP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EFG_BRUAB
Sequence: MAREYKIEDYRNFGIMAHIDAGKTTMTERILFYTGKNHKIGETHDGASTMDWMEQEQERGITITSAATTTFWQGRDGKKRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTETVWRQAEKYHVPRMVFVNKMDKIGADFYRSVEMVGSRLGAVALPVQLPIGAENDFVGVVDLIEMKALTWDGTIGAPATVGEIPADMADKAEEYREKLIELAVEIDEAAMEAYLEGTMPTNDELRALIRKGTIEVKFHPILCGTAFKNRGVQPLLDAVVEFLPAPTDVPAIKGIDVKTETETTRESSDEAPLSMLAFKIMNDPFVGSLTFARIYSGKLTKGVSLENTVKGKRERIGRMLQMHSNSREDIDEAFAGDIVALAGLKETTTGDTLCDPLKPVILERMEFPDPVIEIAIEPKTKADQEKMGIALNRLAAEDPSFRVKSDEESGQTIIAGMGELHLDILVDRMKREFKVEANVGAPQVAYRESITRAAEIDYTHKKQSGGSGQFARVKIIFEPHDGDDFIFESKIVGGSVPKEYIPGVQKGIESVMGAGPLAGFPMLGVKATLIDGAYHDVDSSVLAFEIASRAAFREGAQKAGAQLLEPIMKVEVVTPEDYVGDVIGDLNSRRGQISGTEARGIAAVVNAMVPLANMFGYVNSLRSMSQGRAQYTMQFDHYEPVPTAVAQEIQKKFA
What is the function of this protein?
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation.  During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively.  Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
What are the official names of this protein?
Elongation factor G, EF-G.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SHH_CARAU
Sequence: MRFKTRVLLVSLLSLSLVVSGLACGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSALVSLSDGGQKAVKDLKPGDKVLAADGEGKLVYSDFIMFTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHSMTAAFASSVRAGQKVMVVDDSGHLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLAFAPVRLHHSVSSALFPQNFISQSNATLQQEGVHWYSKLLYHMGTWLLDSHVLHPLGMSVNSS
What is the function of this protein?
The dually lipidated sonic hedgehog protein N-product (ShhNp) is a morphogen which is essential for a variety of patterning events during development (By similarity).  Involved in dorso-ventral patterning of the brain and in early patterning of the developing eyes (By similarity).  Binds to the patched (PTCH1) receptor, which functions in association with smoothened (SMO), to activate the transcription of target genes (By similarity).  In the absence of SHH, PTCH1 represses the constitutive signaling activity of SMO (By similarity).
What are the official names of this protein?
Sonic hedgehog protein, SHHA, Shh unprocessed N-terminal signaling and C-terminal autoprocessing domains, ShhNC.
What is the protein family that this protein belongs to?
Belongs to the hedgehog family.
What are the subcellular locations of this protein?
[Sonic hedgehog protein]: Endoplasmic reticulum membrane. Golgi apparatus membrane. Note=Co-localizes with HHAT in the ER and Golgi membrane. SUBCELLULAR LOCATION: [Sonic hedgehog protein A N-product]: Cell membrane; Lipid-anchor. Note=The dual-lipidated sonic hedgehog protein N-product (ShhNp) is firmly tethered to the cell membrane where it forms multimers (By similarity). Further solubilization and release from the cell surface seem to be achieved through different mechanisms, including the interaction with DISP1 and SCUBE2, movement by lipoprotein particles, transport by cellular extensions called cytonemes or by the proteolytic removal of both terminal lipidated peptides.
Protein: RK33_SACHY
Sequence: MAKGKDVRIRVILECISCVRKGTNKESTGISRYSTQKNRHNTPGQLELRKFCRYCRKHTTHNEIKK
What are the official names of this protein?
50S ribosomal protein L33, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: MUTS_BACCZ
Sequence: MTQYTPMIQQYLKVKADYQDAFLFFRLGDFYEMFFEDAVKAAHELEITLTSRDGGSSERIPMCGVPYHAAKNYIEQLVEKGYKVAVCEQVEDPKTAKGVVRREVVQLITPGTMMEGRTIDEKENNFLAALTHFEDGSYALACNDLTTGQNTVTLLTGSVEDILLEVYATGSKEIVVDSSFSKDELNKLTETLKMTISYEDATAIPEGLEHLVKNVSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQGADPCESLTELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIIIPKRVEVKAQEQEQEVIPEPIVVKEEPVEIEETKVDNEEESQLSFFGAEHSSKKQDKPVLDAKETAVLSQIKKIDLLDMTPLEAMNELYRLQKKLKKG
What is the function of this protein?
This protein is involved in the repair of mismatches in DNA.  It is possible that it carries out the mismatch recognition step.  This protein has a weak ATPase activity.
What are the official names of this protein?
DNA mismatch repair protein MutS.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutS family.
Protein: GLGA_ECOHS
Sequence: MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK
What is the function of this protein?
Synthesizes alpha-1,4-glucan chains using ADP-glucose.
What are the official names of this protein?
Glycogen synthase, Starch [bacterial glycogen] synthase.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
Protein: PSK_SYNE7
Sequence: MVVALGLDFGTSGARAIACDFDSDRSVSVSVTFPKTSQNWPQVWREALWQLLTQIPADWRSRIERIAIDGTSGTVLLCDREGQPQTEPLLYNQACPIDLADLADWVPADHAALSSTSSLAKLWFWQQQFGALPPDWQILAQADWLSLQLHGCSQQSDYHNALKLGYSPDRERFSKNLLDSELGALLPVVHEPGVAIGPILPAIAQEFGLSPDCQICAGTTDSIAAFLASGAHQPGEAVTSLGSTIVLKLLSQVAVSDRLTGVYSHKLGGYWLTGGASNCGGATLRQFFPDTELESLSCQIDPTKKSGLDYYPLPSRGERFPIADPDRLPQLEPRPENPVQFLQGLLEGLTQVETLGYQRLQDLGATPLKRIWTAGGGAKNAVWQQLRQQAIGVPIAIAPNTEAAFGTARLAAFGLAAFHSAGLKRT
What is the function of this protein?
Exhibits ATP hydrolysis without substrate.  Phosphorylates D-ribulose.
What are the official names of this protein?
D-ribulose kinase, D-ribulokinase, Probable sugar kinase, SePSK.
What is the protein family that this protein belongs to?
Belongs to the FGGY kinase family.
Protein: MNMG_CHLCH
Sequence: MYDVIVVGAGHAGCEAILAAARMGATCLLITSDLTAIARMSCNPAIGGMAKGQITREIDALGGEMAKAIDATGIQFRLLNRSKGPAMHSPRAQADRTLYSLYMRTIIEREPNIDLLQDTVIAIETKGECFAGVRITSSRVIEGKSAILTCGTFLNGLIHVGMNHFAGGRTIAEPPVVGLTENLCAHGFQAGRLKTGTPPRIDSRSIDYRKVDEQPGDIEPILFSFESKGALQSKQVSCFITKTTEETHAILRKGFERSPLFTGKVQGIGPRYCPSVEDKIFRFPDKNSHHIFLEPEGIDTNEMYVNGFSTSLPEDIQLEGLHSIPGLEQVKMIRPGYAIEYDYFYPHQIQATLETRLIENLYFAGQINGTSGYEEAAAQGLMAGINAVLKMRKHEPLILTRSDAYIGVLIDDLITKETNEPYRMFTSSAEHRLLLRHDNADIRLHEFGYRVGLLPEHRYQATRQKIEQINAVKTLLSQIRLESGLANKLLQELEYGEVTGAQQVTTLLKRPRVTLAKLLATSPELHSQLSNISNNPLVYEQVEIDCKYEGYLKRDALVAEKIQRLEAHHIPALLDYHAIAGLSNEGREKLKKHRPENIGQASRILGVSPSDISILMVHLGR
What is the function of this protein?
NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, Glucose-inhibited division protein A.
What is the protein family that this protein belongs to?
Belongs to the MnmG family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UBIV_ECOLI
Sequence: MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA
What is the function of this protein?
Required for O(2)-independent ubiquinone (coenzyme Q) biosynthesis.  Together with UbiU, is essential for the C6-hydroxylation reaction in the oxygen-independent ubiquinone biosynthesis pathway.
What are the official names of this protein?
Ubiquinone biosynthesis protein UbiV.
What is the protein family that this protein belongs to?
Belongs to the peptidase U32 family. UbiV subfamily.
Protein: PVK_IXORI
Sequence: PALIPFPRV
What is the function of this protein?
Mediates visceral muscle contractile activity (myotropic activity).
What are the official names of this protein?
Periviscerokinin.
What is the protein family that this protein belongs to?
Belongs to the periviscerokinin family.
What are the subcellular locations of this protein?
Secreted.
Protein: SYI_DESVM
Sequence: MSDYKKTLHLPDTKFPMKANLTQREPEMLKFWEGIDAYAAMAQASGQKGQYVLHDGPPYANGHIHLGTALNKILKDMVVKSRNMQGYAARYVPGWDCHGLPIEHKVEQELGEKKKELPAHVVRKRCRQYAEKYLDIQRKEFKRLGVLGAWDKPYMTMDPAYESATARELGNFVAAGNVVRSKKPIYWCCSCQTALAEAEVEYYDHTSPSIFVRFPLRDPKVADVLNVDPASAWIVIWTTTPWTLPDNMAVAVHPDHDYAVVRHDGAHYVLAAALVESSAKTFGWENCEVVSTVPGAKLEGLVATHPFYDRPSPVVLADYVVLDSGTGCVHTAPGHGREDYETGLRYGLEILSPLNDEGRFLDSVPFFAGLTVFEANPKVIEKLREVGNLLAERKISHSYPHCWRCKKPVIFRATTQWFIAMEKNDLRARALSAIRNDVRWIPAWGEERIHNMIEFRPDWCISRQRTWGVPIIALLCEGCGEAWNDAAWMRDIADRFAKHPTGCDYWYETPLEGIVPAGLACPHCGGNHWKKETDILDVWFDSGTSFSAVLEQRGDTAFPADLYLEGSDQHRGWFHSSLLASMGTRGVPPYRAVLTHGYVVDGEGRKMSKSIGNVIAPQEIIDKYGAEILRLWVASVDYREDIRISDEILSRLVDAYRRIRNTCRYLLGNIDDLTPEEIVPFSVMDPLDRYALDIVTDAHARIQEAYSEFEFHKVFHTLHNLCVTDLSAFYLDVLKDRLYASAKDSPERRSAQTALLHILLVLVRDMAPVLSFTAEEVFRHIPEALRPAAATVFALRGSDTPLYNVSSDESERWEAVLAVRSEVTKAIEPLRKAGTVGHSLDTHVTLYADHKLADLLRATGTDLRAVFIVSKLNIAPLEDAPQDAFASDEVKGLRIGVAKAPGAKCERCWIYHEELGADPGYPGACARCTTVLRTSGAE
What is the function of this protein?
Catalyzes the attachment of isoleucine to tRNA(Ile).  As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities.  One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP.  The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
What are the official names of this protein?
Isoleucine--tRNA ligase, Isoleucyl-tRNA synthetase, IleRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PROB_SALEP
Sequence: MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIASGSKPGVIGDVMEGISVGTRFHAQASPLENRKRWIFGAPPAGEITVDEGATAAMLERGSSLLPKGIKSVTGNFSRGEVIRICNLQGRDIAHGVSRYNSDALRRIAGHHSQQIDAILGYEYGPVAVHRDDMITR
What is the function of this protein?
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
What are the official names of this protein?
Glutamate 5-kinase, Gamma-glutamyl kinase, GK.
What is the protein family that this protein belongs to?
Belongs to the glutamate 5-kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATPE_MYCS2
Sequence: MADLNVEIVAVERELWSGPATFVFTRTTAGEIGILPRHIPLVAQLVDDAMVRVEREGEDDLRIAVDGGFLSVTEETVRILVENAQFESEIDADAAKEDAASDDERTAAWGRARLRALGQID
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
ATP synthase epsilon chain, ATP synthase F1 sector epsilon subunit, F-ATPase epsilon subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase epsilon chain family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: CAPSD_BSMV
Sequence: MPNVSLTAKGGGHYIEDQWDTQVVEAGVFDDWWVHVEAWNKFLDNLRGINFSVASSRSQVAEYLAALDRDLPADVDRRFAGARGQIGSPNYLPAPKFFRLDKRTIAELTRLSRLTDQPHNNRDIELNRAKRATTNPSPPAQAPSENLTLRDVQPLKDSALHYQYVLIDLQSARLPVYTRKTFERELALEWIIPDAEEA
What is the function of this protein?
Capsid protein self-assembles to form rod-shaped virions about 21,6 nm in diameter for the narrow nes and 22,4 for the wide ones, and 110-150 nm in length depending on the size of the encapsidated RNA (PubMed:23725818, PubMed:26278173).  They display a helical symmetry of 23. 2 subunits per turn of the viral helix and with a central canal enclosing the viral genomic RNA (PubMed:23725818).
What are the official names of this protein?
Capsid protein, Beta-A protein, Coat protein.
What is the protein family that this protein belongs to?
Belongs to the virgaviridae capsid protein family.
What are the subcellular locations of this protein?
Virion.
Protein: SPKAP_MOUSE
Sequence: MDVNSRLSVQSNVESPLMHEGPEPQQITSSAAGNLAGSITACKKVLRSNSLLESTDYWLQNQRTPCQIGFVEDESENCASVCFVNLDVNKDACITENLQQKLVNVSPDLPNLISSMNVQQPKENEIVLLSGLASGNPQADFDVSQCPWLPDICLVQCARGNRPNSTNCIIFEINKFLIGLEVVQERQLHLETNVLKLEDDTNCSLSSIEEDFLTASEHLEEEIEVDDCRSGLENTNVSANVLESKKPKETTQEGWDYHKEKLHCALGEKHIRKHRTPSTKTEGSKENTEENTSLKSLNRLVRPSHLKSEVAGNKQLATNYSYPENIKGELETSQMLFIPRDAYLSMVKKDVLSPCSVLSEQGGSHRDHDVTPNPLPPVQNGEASTGEYATNLAESVMQDAFIRLSQSQPTLPQESAVSFSMRSALLPSGCCTKDMVVPRSWNELPKIVIVQSPDGSDTVPEPNVSSWPDMEFVETSGIFSADSSSRPTQSALEVALACAATVIGTISSPQATERFAMEQESLVSTYAQRGTGVQQTQVPQAFMAPSTTEYSFPSALCGMTQVASAVAVCGLCEKEEATCPVAPTDLLPTSGASEEISSIGSLVMERSTELGKEAIAEALLREATLILARPDAYSSLGELLESVNQRIIETTSKTQTLCTESVQRNELAHTLSNVILKHSVDELHQKTTMAHPTDERHPCGTLDTLMESVNQLLHNVICFTFKKMNHIVTLSEHPSFDQAAGQAWVKAFACPSSQPLSNAHGTGLVIRNLVEDASPKSNKGGARPELVNNPRLQSEFSCSHRMFDSTAKSFPKEIYLKGIMGEDTRNPHHTLNYDSNERRASTDLGKLTTASEGCSGFQETEDSIVPNTQEKYICATPLNNEAQVNLSLLGDDLSVPAQSTLEAKQSEVYGITDFAEELAETVVSMATEIAAICLDNSNGKQPWFCAWKRGNEFLTAPNGSCRSLKRKKENSSAGSTVRKHKPPRLSEIKRKADEHPELKEKLMNRVMDESMNLEDIPDSVSTFANEVAAKIMNLTEFSMVDGVWQGQSCSRTRLLGGDRWNRLKASSCESIPEEDSEARVFVNSLGLMSTLSQPVSRASSVSKQSSCESITDEFSRFMVKQMENEGRGFELLLDYYAGKNASSIMSSAMQQACQKNDHLNVRPSCPSKQSSTESITEEFYRYMLRDIAKESKDGASSRRSSHDWTTGLLSPSTRSPLCYRQSSMPDSRSPCSRLTVNAPVKANSLDGFAQNCPQDSVNVQPVSRASSSGLCKSDSCLYRRSGTDQITNMLIHETWASSIEALMRKNKIIADDSEAANASPGPVSSGSPLQVEKNANRLATSKGHRGPTLLVQESVDYQRKDAVTEGNHSPVSSPGKTAPVKKPSDFDPRRETSACHNAAGLNSPRRSLCSRDVPLIQIETDQKEECIGEPGPFLSQSGSLEETEGHQPEETIPDVARNEDTAPSTCQSSRDSLETSGEVEVEVLKEDIPRDESRNPPSSSEESTGSWSQLANEEDIPDDTSSFLQLSERSMSNGNSSGTSSLGIMDLDIYQESIPSSPMINELVEEKEILKEQSESIKEHASGLPGRAASPQRSLLVINFDLEPECPDAELRATLQWIAASELGIPTIYFKKSQESRIEKFLDVVKLVQQKSWKVGDIFHAVVQYCKLHAEQKERTPSLFDWLLELG
What is the function of this protein?
Anchoring protein that binds preferentially to the type I regulatory subunit of c-AMP-dependent protein kinase (PKA type I) and targets it to distinct subcellular compartments.  May act as a converging factor linking cAMP and sphingosine signaling pathways.  Plays a regulatory role in the modulation of SPHK1 (By similarity).
What are the official names of this protein?
A-kinase anchor protein SPHKAP, SPHK1-interactor and AKAP domain-containing protein.
What is the protein family that this protein belongs to?
Belongs to the AKAP110 family.
What are the subcellular locations of this protein?
Cytoplasm. Note=Colocalizes with SPHK1 in the cytoplasm.
Protein: AIMA_BACSU
Sequence: MNQLHRRMGTFSLMMVGLGSMIGSGWLFGAWRAAQIAGPAAIISWVIGMVVILFIALSYSELGSMFPEAGGMVKYTQYSHGSFIGFIAGWANWIAIVSVIPVEAVASVQYMSSWPWEWAKWTSGLVKNGTLTGEGLAFASVLLLIYFLLNYWTVNLFSKANSLITIFKIIIPGLTIGALLFVGFHGENFTGGQSIAPNGWASVLTAVATSGIVFAFNGFQSPINMAGEAKNPGKSIPIAVVGSLFVATVIYVLLQIAFIGAVNPSDIAHGWSHLNFNSPFADLAIALNINWLVIVLYADAFVSPSGTGITYTATTSRMIYGMEKNKYMPSIFGKLHPIYGVPRQAMFFNLIVSFIFLFLFRGWGVLAEIISVATLISYITGPITVMTLRRTGKDLYRPLRLKGLNVIAPLGFIFASLVLYWARWPLTGQVLFIILIGLPIYFYYQAKAKWKGFGRNFKAGVWMVFYLLAMMVISYLGSDKFGGLNVIHYGWDMVLIAMVSLVFYVWALKSGYQTEYLKDAKEINSQLLNGQSEAAAGKE
What is the function of this protein?
Major glutamate and serine transporter (PubMed:32743959, PubMed:33481774).  Cannot transport threonine (PubMed:32743959).  AimA is the major glutamate transporter under standard growth conditions when glutamate is not limiting in the medium (PubMed:33481774).
What are the official names of this protein?
Glutamate/serine transporter AimA, Amino acid importer A.
What is the protein family that this protein belongs to?
Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family.
Protein: MAGBI_MOUSE
Sequence: MPRGQKSKLRAREKRRQARAKNAQEKEASPGPFYGCPHQASPVASMPTSPNMPMGEQSTFSHSYTSTSDQNLDEKSSDDSEDTEDWCKDPINHKVVLLVQFLMEKYQKKEVITKADMLKYVIKTSKNHFNEILKRASEHMELAFGIDLKEVDPNRHCYALFNKLEHTFDGVMGEEKMPSSGLLMIVLGVIFMNDNCVSETEIWNVLSMMGVYANRKHFIYGDPKKVITEDMVQLKYLEYQQVPNSNPPSFEFTWGPRACAEISKMKILEFWAKIHDTTPDSFPTLYEAALKDEEERAQARAVARAHTAAMASPYSRATVCSSSHTNI
What is the function of this protein?
May enhance ubiquitin ligase activity of RING-type zinc finger-containing E3 ubiquitin-protein ligases.  Proposed to act through recruitment and/or stabilization of the Ubl-conjugating enzyme (E2) at the E3:substrate complex.
What are the official names of this protein?
Melanoma-associated antigen B18, MAGE-B18 antigen.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ANR39_DICDI
Sequence: MDKHHNHECNGHECNHVQVDSVTQSLDELNFERGIWGSIINSDFKKVEQLLYKNSSLSNTMDSSGYYPLHYAVRNDKNNDIVQLLLDNGANINCQTSGGATPLHRSCFCNSINNTKLLLKKGITKVDLIDSDGMTPLHKAYQQGNMEIVNLLLQFGADPNILDKNKMKPIQLLK
What are the official names of this protein?
Ankyrin repeat domain-containing protein 39 homolog.
What is the protein family that this protein belongs to?
Belongs to the ANKRD39 family.
Protein: AAS_SALNS
Sequence: MLFGFFRNLFRVLYRVRVTGDVRVLQGNRVLITPNHVSFIDGMLLALFLPVRPVFAVYTSISQQWYMRWLTPLIDFVPLDPTKPMSIKHLVRLVEQGRPVVIFPEGRISVTGSLMKIYDGAGFVAAKSGATVIPLRIDGAELTPFSRLKGLVKRRLFPRIQLHILPSTQIPMPEAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLAAQYRYGAGKNCIEDINFTPDTYRKLLTKTLFVGRILEKYSVEGEKIGLMLPNAAISAAVIFGAVSRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTPADKLWIFAHLLAPRLAQVKQQPEDAAIILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTANDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLAVPGIENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENSRGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGEALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGKPDFVTLKSWVDAPEQHHE
What is the function of this protein?
Plays a role in lysophospholipid acylation.  Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium.  Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1.
What are the official names of this protein?
Bifunctional protein Aas.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: MSRAB_NEIMA
Sequence: MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLHEKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPTSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTEEQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPIDAKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQMDAAGYGALKSKVK
What is the function of this protein?
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation (By similarity).  Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
What are the official names of this protein?
Peptide methionine sulfoxide reductase MsrA/MsrB.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the MsrB Met sulfoxide reductase family.