PharMolix/UniProtQA huggingface dataset:
Protein: TRPA_VIBVU
Sequence: MDRYQATFERLAAQKQGAFVPFVTVCDPNPELSLKIMDTLVKAGADALELGIPFSDPLADGPTIQGANIRALDSGATPDICFDLIGQIRAKYPDLPIGLLMYANLVYSRGIENFYQRCAQAGIDSVLIADVPTNESAEFVAAAEKFGVHPIFIAPPTASDETLKQVSQLGGGYTYLLSRAGVTGAETKANMPVGDMLAKLEQFNAPPALLGFGISEPEQVKQAIDAGAAGAISGSAVVKIIESHLNEPDAMLTALANFVSNMKSATQK
What is the function of this protein?
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.
What are the official names of this protein?
Tryptophan synthase alpha chain.
What is the protein family that this protein belongs to?
Belongs to the TrpA family.
Protein: NU3C_ACOAM
Sequence: MFLLHEYDIFWAFLLISSVIPILAFLISGVLAPTREGPEKLSSYESGIEPIGDAWVQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFLEALIFVLILIVGSVYAWRKGALEWS
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic, NAD(P)H dehydrogenase subunit 3, NADH-plastoquinone oxidoreductase subunit 3.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 3 family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: ASH2_DROME
Sequence: MEDSQMDTSSPTESSSEVNFTAEEDKSQETRSAAGVCYCGKERNLNIVELLCATCSRWVHETCVSYQLGKGKLLPFITNYVFVCKNCSASGLESFRKSQATISQMCHCAIANMQQAASRDGRRQIQFSKDKEIIPYIEQYWEAMTTMPRRLTQSWYSTVQRSLVKDVQTLFTYEEHAEHGAMYGLFHQDLRIIKPNYESMSKSGALRLTDDGYTQASLSKNNRQKRKFPGTDSGPTGKKGRPSSDITANVKLPPHGYPLEHPFNKDGYRYILAEPDPHAPFRQEFDESSDWAGKPIPGWLYRILVPHSVLLALHDRAPQLKISEDRLAVTGERGYCMVRATHSVNRGCWYFEVTIEEMPDGAATRLGWGREYGNLQAPLGYDKFGYSWRSRKGTKFTESHGKHYSDAYVEGDTLGFLIELPEEASLDYLPNTFKDRPLVKFKSHLYYEDKDKITETLKNLHILQGSRIEFFKNGQSQGVAFEDIYAGSYFPAISIHKSATVSVNFGPAFKYPEVLVEHKAKGMHDRVEELITEQCLADTLYLTEHDGRLRLDNMGL
What is the function of this protein?
Transcriptional regulator.  Regulates a number of genes involved in wing development including activation of net and bs and repression of rho and kni and controls vein-intervein patterning during wing development.  Required for correct expression of a number of homeotic genes including Scr in the first leg imaginal disk and Ubx in the third leg imaginal disk and haltere disks.  Required for stabilization of the histone-lysine N-methyltransferase trr and for trimethylation of 'Lys-4' of histone H3.  Plays a role in maintenance of transcriptionally active chromatin through down-regulation of histone H1 hyperphosphorylation.
What are the official names of this protein?
Set1/Ash2 histone methyltransferase complex subunit ASH2, Absent, small, or homeotic discs protein 2.
What are the subcellular locations of this protein?
Nucleus. Chromosome. Note=Accumulates on salivary gland polytene chromosomes.
Protein: MAP6_CHICK
Sequence: MAWPCITRACCIARFWNQLDKADIAVPLVFTKYSEATEQPLPAQIPRSAAAPIDTQPGGDARAAGGGDAAPGPARPGTAPHGSPPADSVMRHDYKPWKVQRPEPSCKPKSEYQPSDTPFEKETQYQKDFRAWPIPKRGDHPWIPKAGPSPVLGPERGSPEKAAQEKRRKKEEEAEADEEHPKAARPGDAREKGRQRGDEAGGQEGRGRAAADALNRQIKEEVVAAGVSSSYRNEFRPWIDVKPVKAIKAKAQYKPPEEKMTHETSYSAQFKGETSKPAPADNKFLERRRIRTLYSEPYKEPPKVEKPSVKPSKPKKTTTSHKPLKKAKDKQIASGRAAKKKSAETSNTAKPEDKEKSKEMNNKLAEAKE
What is the function of this protein?
Involved in microtubule stabilization in many cell types, including neuronal cells.  Specifically has microtubule cold stabilizing activity.  Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking (By similarity).
What are the official names of this protein?
Microtubule-associated protein 6 homolog, MAP-6 homolog, Stable tubule-only polypeptide homolog, STOP.
What is the protein family that this protein belongs to?
Belongs to the STOP family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: RGLG1_ARATH
Sequence: MGGGNSKEESSSPSSSSWASHQSYPQYGPDSYNYPPPPTYAPAPSPAPAPAPVPAPSPASSYGPQYSQEGYASQPNNPPPPTYAPAPSPASSYGHQYSQEGYASAASQPNYPPPPSQSQVADRKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEHGRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPVQSGSSFSSSRIPNFEPSVPPYPFESKQMSSADDIQLCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY
What is the function of this protein?
E3 ubiquitin-protein ligase that mediates the formation of 'Lys-63'-linked ubiquitin chains.  Regulates apical dominance by acting on the auxin transport proteins abundance (PubMed:17586653).  Together with RGLG5, mediates the ubiquitination and subsequent proteasomal degradation of the target protein PP2CA.  Functions as positive regulator of abscisic acid (ABA) signaling through ABA-dependent degradation of PP2CA, a major inhibitor of ABA signaling (PubMed:27577789).  Acts as a negative regulator of drought stress response (PubMed:22095047).
What are the official names of this protein?
E3 ubiquitin-protein ligase RGLG1, RING domain ligase 1.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor. Nucleus.
Protein: RKM5_YEAST
Sequence: MAFKLWLLDEETIYEHVFERYTQLEGQSGKLAQDLGIQDRRGGVLEITFEPSGLEGGRKKKRVRRRNKASSVEEDQNVAVDSYHVSVGQSISSLRSSRDNGNSTTGYVLWSTTPFFINWLLYSTSAAPFRLGSQVEVTCGSSCEGHKLELPRLVDLTGADRGKRGILELGAGISGILPVILGNFVDTYVSTDQKGILNKLKDNIMENLSQLTRKRCISRSLRLELPTVEPVGDADITAASLPSKSTLHLEVAALDWEKINLQDKKTHSLHPELSLIGETCSSVYVIAMDVIYNEYLIDPFLKTLKQLKHWLQTTYNLQFHVLVGIHLRSQEVTTLFLEKAIIEYDFTVYDIVDQVIQESRFNFYLIT
What is the function of this protein?
S-adenosyl-L-methionine-dependent protein-lysine N-methyltransferase that monomethylates 60S ribosomal protein L1 (RPL1A and RPL1B) at 'Lys-46'.
What are the official names of this protein?
Ribosomal lysine N-methyltransferase 5.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RKM5 family.
Protein: TRUD_XANOM
Sequence: MSETSLLPRAHGAAVLSAAMRSTPDDFQVDELPAFEPSGEGEHLLLTVCKRGQNTAYIAKKLAHWAGIAEMGVGYAGLKDRHAVTTQRFSVHLPKRIAPDIAALDDAQMQVIDSTWHNRKLQRGALHGNGFVLTLRQVHGERDAVEERLQAIAARGIPNWFGEQRFGRDGGNVAAALVMFGYVQAADGTLAPAPTSRRRLRNDQRSMLLSAARSALFNRVLTARVEQDSWDSALEGEAWMLDGSRSVFGPEPWSDALAERLACFDIHPSGPLWGAGALRSTDQAAAVEQGALSDPQSEALRQGLEAAGLKQERRALRLRPQGLDYRWLEAQTLQLEFALPPGCYATAVLWELGEVTDAGRFDAGVRSDE
What is the function of this protein?
Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase D, tRNA pseudouridine(13) synthase, tRNA pseudouridylate synthase D, tRNA-uridine isomerase D.
What is the protein family that this protein belongs to?
Belongs to the pseudouridine synthase TruD family.
Protein: DAPF_ORYSJ
Sequence: MSSATAAATATIAAAAAKLAATPAPAPSRRRLTLRGNPTARRCVAAMAVSTPRSAAAAAFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLIIPEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCVTFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGSAVH
What are the official names of this protein?
Diaminopimelate epimerase, chloroplastic, DAP epimerase.
What is the protein family that this protein belongs to?
Belongs to the diaminopimelate epimerase family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: IF6_XENLA
Sequence: MAVRASFENNNEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSETIPVVHASIAGCRIIGRMCVGNRHGLMVPNNTTDQELQHMRNSLPDSVRIQRVEERLSALGNVIACNDYVALVHPDLDRETEEILADVLKVEVFRQTIAEQVLVGSYCAFSNQGGLLHPKTSIEDQDELSSLLQVPLVTGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVIESVFKLSDAHPSTIATSMRDSLIDSLT
What is the function of this protein?
Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm.  May also be involved in ribosome biogenesis.
What are the official names of this protein?
Eukaryotic translation initiation factor 6, eIF-6.
What is the protein family that this protein belongs to?
Belongs to the eIF-6 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus, nucleolus. Note=Shuttles between cytoplasm and nucleus/nucleolus.
Protein: NAGB_LACLS
Sequence: MKVIVVKNQLEGGKIGLDLLKESINNGAKTLGLATGSTPVEFYNQIVNSDLDFTNMVSVNLDEYVGLDGSNEQSYRYFMTKHLFGEKPFKENFLPNGKATDLEAEAKHYDQIIEENPIDWQILGIGQNGHIGFNEPGTPAEITTHVVDLQESTIKANARFFESEADVPRKAISMGLASIMKSKNIVLMAYGKEKAEAIKGMVEGEVTTELPASILQNHANVTVIADEAAVSLLSK
What is the function of this protein?
Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
What are the official names of this protein?
Glucosamine-6-phosphate deaminase, GlcN6P deaminase, GNPDA, Glucosamine-6-phosphate isomerase.
What is the protein family that this protein belongs to?
Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
Protein: YJJY_SHIFL
Sequence: MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILTAT
What are the official names of this protein?
Uncharacterized protein YjjY.
Protein: SECY2_STRSV
Sequence: MKSFFKPVIIKKFLWTLFFLFIYVLGTKLTLPFVDMSKAAAMDGTSTTLNYATALMGGNLRSMSLFSVGLSPWMSSMLIWQMFAVSKRLGLSKLPLEVQERRRMLLTLVIALIQSVALVLNLPLQEAAGVDMTTIMVLDTLVLMAGTYFLIWLTDLNAAMGLGGSIMIVMASMIAYIPQDIWNSIQELKISSLWLALMLVFSLVFLYLAVTVERSKYRIPVNKINIHNRFKKYSYLDIRLNPAGGMPIMYAMTLVSIPQYFLLIIHFLQPENQLIEQWIEALSMGSPAWFILYLLTIFILALAFAFINISGDQIAERMQKSGEYIENVYPGGATRRYINGLVTYFALVGAFYLILISGLPMMVVLVDIRYLRLSMIPGIFMIFIGMVFSIKDEVEALTLNDRYRSLL
What is the function of this protein?
Part of the accessory SecA2/SecY2 system specifically required for export of possible cell wall proteins.  The central subunit of a protein translocation channel.
What are the official names of this protein?
Accessory Sec system protein translocase subunit SecY2.
What is the protein family that this protein belongs to?
Belongs to the SecY/SEC61-alpha family. SecY2 subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: REP1_FBNY1
Sequence: MASKRWCFTLNYKTAVERESFISLFSRDELNYFVCGDETAPTTNQKHLQGYVSLKKMIRLGGLKKKFGYRAHWEIAKGDDFQNRDYCTKETLISEIGAPVKKGSNQRKIMDLYLQDPEEMQLKDPDTALRCNAKRLRIEYCSSFAVISLRPWQSELHRVLMAEPDDRTIIWVYGSDGGEGKSTFAKELIKYGWFYTAGGKTQDILYMYAQDPERNIAFDVPRCSSEMMNYQAMEMLKNRVFASTKYRPVDLCVRKKVHLIVFANVSPDPTKISEDRIVIINC
What is the function of this protein?
Initiates and terminates the replication only of its own subviral DNA molecule.  The closed circular ssDNA genome is first converted to a superhelical dsDNA.  Rep binds a specific hairpin at the genome origin of replication.  Introduces an endonucleolytic nick within the intergenic region of the genome, thereby initiating the rolling circle replication (RCR).  Following cleavage, binds covalently to the 5'-phosphate of DNA as a tyrosyl ester.  The cleavage gives rise to a free 3'-OH that serves as a primer for the cellular DNA polymerase.  The polymerase synthesizes the (+) strand DNA by rolling circle mechanism.  After one round of replication, a Rep-catalyzed nucleotidyl transfer reaction releases a circular single-stranded virus genome, thereby terminating the replication.  Displays origin-specific DNA cleavage, nucleotidyl transferase, ATPase and helicase activities.
What are the official names of this protein?
Para-Rep C1, Rep1, ATP-dependent helicase C1, Replication-associated protein of non-essential DNA C1.
What is the protein family that this protein belongs to?
Belongs to the nanoviridea/circoviridae replication-associated protein family.
What are the subcellular locations of this protein?
Host nucleus.
Protein: NADD_NOCSJ
Sequence: MGGTFDPIHHGHLVAASEVQAWFDLDEVLFVPTGDPWQKSDRDVSPAEHRYLMTVIATAANPRFTVSRVDIDRSGPTYTIDTLRDLRAQLPDAELYFITGVDALAEIFTWRDAEELFTLARFVGCTRPGYLMDDAALATIPTDRVTIVEIPALAISSTDCRRRSQRGEPVWYLVPDGVVQYLAKYDLYPRVIPPDTTKDTSEDMQ
What is the function of this protein?
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
What are the official names of this protein?
Probable nicotinate-nucleotide adenylyltransferase, Deamido-NAD(+) diphosphorylase, Deamido-NAD(+) pyrophosphorylase, Nicotinate mononucleotide adenylyltransferase, NaMN adenylyltransferase.
What is the protein family that this protein belongs to?
Belongs to the NadD family.
Protein: MNME_CLOBM
Sequence: MKEFDTITAVATPVGEGGISIIRISGDKSLDIVSSIFKGKNDRSLDDIKPYSMRYGFIIEKESKEIIDEVLVSYMKGPRSFTAEDTLEINCHGGVIPTKKILKELIKSGARLAEPGEFTKRAFLNGRIDLSQAEAVIDIIRSKTDLSMKSALKQAEGTLSKEINSIRNRMIKIIAHIEATVDYPEDDLEEITGQKIKVDLKEIINKIDNLISASEEGKILREGLNTVIVGKPNVGKSSLLNALINENKAIVTEIPGTTRDVIEEYINIDGIPIKIVDTAGIRETEDVVEKIGVEKSKEKIDEADLVIFMLDLSRKIDEEDIEIMDFIKNKKYIVLLNKLDLNKDLNEENHFIKELDSKYIIKTSVKNNSGLNELKECIKNLFFSGEIKSDELIVTNARHQEALIRSRESCIQAIETLSDEISIDLASIDIRNAWKYLGEITGDTLDENIIDKIFSEFCLGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HBEAG_HBVD4
Sequence: MQLFHLCLIIFCSCPTVQASKLCLGWL
What are the official names of this protein?
Truncated HBeAg protein.
Protein: RS3_RHOJR
Sequence: MGQKINPHGFRLGITTDWKSRWYADKQYAEYVKEDVAIRKLLATGMERAGIAKVEIERTRDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNAEAEAQLVAQGVAEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAANVAAPAGDRPRRERPSRPRRSGATGTTATSTEAGRAATATADAPATTEQKEG
What is the function of this protein?
Binds the lower part of the 30S subunit head.  Binds mRNA in the 70S ribosome, positioning it for translation.
What are the official names of this protein?
30S ribosomal protein S3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS3 family.
Protein: Y2808_BACLD
Sequence: MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLLFCQRNQKPCPILDVTDPGSPVPSITAPDADIRTDFPKYRVYKRGELADEVTDISSLWEDDMVGFLIGCSFTFEQALMNNGIPVRHIEEKRNVPMYQTNIPCVPAGRFQGPMVVSMRPVPEEQAVRAVQVTSRLPAVHGGPVHIGSPEAIGITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPELMITHSPGHMLVTDVRDEQFGVL
What are the official names of this protein?
Putative hydro-lyase BLi00500/BL02808.
What is the protein family that this protein belongs to?
Belongs to the D-glutamate cyclase family.
Protein: MTRR_RAT
Sequence: MRRFLLLYATQRGQAKAIAEEISEQALSHGFSADLHCVSESEKYDLKTETGPLVMVVSTTGTGDPPDTARKFVKEIHNKTLPTDFFAHLWYGLLGLGDSEYTYFCNGGKVIDKRLQELGAQHFYDTGHADDCVGLELVVEPWIDGLWPALTKHFKSLGGQEDMSDSDTLAQASDAPLSMAMKPELLHIQSQVELLSLEDVGKRDSELQEQNETNKNQPSRIEDFDSSLVNSVPPLSQSSLSIPAVSPEYLEVYLQESLGQDENQASVPPSVDPIFQVPISKAVELTTNDAIKTTLLLELDISKVEFSHQPGDSFNVICPNSGSEVEDLLQRLQLADKQAHRVILKIKMDTKKKGASLPQHVPEGSSLQFIFTWCLEIRAVPKKAFLRALSDYTSDATEKRRLQELCSKQGAADYNRFIRDASVCLLDLLLTFPSCQPPLNLLLEHLPKLQPRPYSCASSSLLHPDKLHFVFNIVELPSNTTAASLRKGVCTGWLATLVAPFLQPNTEVLTADHSDALAPEILISPRATNSFHLPDDLSAPIIMVGPGTGVAPFVGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFREELRHFLKTGVLTHLKVSFSRDAAPEEEEEAPAKYVQDNLQHHSQQVARTLLQENGYIYVCGDAKNMAKDVHDALVEIISKEAGVDKLEAMKTLATLKQEKRYLQDIWS
What is the function of this protein?
Key enzyme in methionine and folate homeostasis responsible for the reactivation of methionine synthase (MTR/MS) activity by catalyzing the reductive methylation of MTR-bound cob(II)alamin.  Cobalamin (vitamin B12) forms a complex with MTR to serve as an intermediary in methyl transfer reactions that cycles between MTR-bound methylcob(III)alamin and MTR bound-cob(I)alamin forms, and occasional oxidative escape of the cob(I)alamin intermediate during the catalytic cycle leads to the inactive cob(II)alamin species.  The processing of cobalamin in the cytosol occurs in a multiprotein complex composed of at least MMACHC, MMADHC, MTRR and MTR which may contribute to shuttle safely and efficiently cobalamin towards MTR in order to produce methionine (By similarity).  Also necessary for the utilization of methyl groups from the folate cycle, thereby affecting transgenerational epigenetic inheritance (By similarity).  Also acts as a molecular chaperone for methionine synthase by stabilizing apoMTR and incorporating methylcob(III)alamin into apoMTR to form the holoenzyme.  Also serves as an aquacob(III)alamin reductase by reducing aquacob(III)alamin to cob(II)alamin; this reduction leads to stimulation of the conversion of apoMTR and aquacob(III)alamin to MTR holoenzyme (By similarity).
What are the official names of this protein?
Methionine synthase reductase, MSR, Aquacobalamin reductase, AqCbl reductase.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RPOZ_PHOPR
Sequence: MARVTVQDAVDKIGNRFDLIQIASRRARQLQTGGKDPLVPEENDKYTVIALREIEEGLITKDILDARERQELQEQEAAELAAVSAIAGDHHHHR
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: HIS4_ENT38
Sequence: MIIPALDLIDGTVVRLHQGDYGQQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQITLLKSLVSGVDVPVQVGGGVRTEEDVAALLEAGVARVVVGSTAVKDPEMVKDWFRRFGADALVLALDVRIDDQGNKQVAVSGWQENSGVTLEELVEIYLPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDLADIAALRGTGVRGVIVGRALLEEKFTVTEAIQCWQNG
What are the official names of this protein?
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ALFL6_ARATH
Sequence: MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSNKRARP
What is the function of this protein?
Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
What are the official names of this protein?
PHD finger protein ALFIN-LIKE 6, Protein AL6.
What is the protein family that this protein belongs to?
Belongs to the Alfin family.
What are the subcellular locations of this protein?
Nucleus.
Protein: YL053_MIMIV
Sequence: MSKNCCCKICCASAKKCCDEPVFISCREKCEPVIYKCYEICEPVCTPVCKPCKPICKPCKPICTPCKPVCKPVCKPICTPCKPICKPKCCPTYNVSVNLC
What are the official names of this protein?
Uncharacterized protein L53.
Protein: ALR_DINSH
Sequence: MATATLSIDLDAIAANWRALDRASNRRVATGAVVKADGYGLDAGRVARTLAQAGARQFFVAVAEEGVTLRKALGPGPAINVFSGHMEGDTQAIAGARLTPMINSAEQLARHFEALPRHPFGIQLDTGMNRLGMEADEWAAVAEFALGQGPKLVMSHLACADEPGHAANAAQLAEFHRLTDGITVPRSLSATGGILLGEAYHFDMTRPGIGLYGGAPFGAAEPVVRLSIPVVQVRAVTAGESVGYGCSWVAQSDGAIATLSAGYADGLIRAMSNRAMLYAGDVACPLAGRVSMDLLTVDVSHLDEVPEALDLLCPAQGVDRLAEAAGTIGYEILTSLGPRYARHYAGGVA
What is the function of this protein?
Catalyzes the interconversion of L-alanine and D-alanine.  May also act on other amino acids.
What are the official names of this protein?
Alanine racemase.
What is the protein family that this protein belongs to?
Belongs to the alanine racemase family.
Protein: RS14_ENT38
Sequence: MAKQSMKAREVKRVALADKFFAKRAELKAIISDVNASDEDRWNAVLKLQSLPRDSSPSRQRNRCRQTGRPHAFLRKFGLSRIKVREAAMRGEIPGLKKASW
What is the function of this protein?
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
What are the official names of this protein?
30S ribosomal protein S14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS14 family.
Protein: FOLD_TROW8
Sequence: MVAKVLDGLAVSAGIFERLHRACCELENNGVCPKLATVLVGNNPASRSYVLSKHRDCNNIGIQSTLIELPANTSEKELISKVEILNASSDVSGIIVQLPLPESIDQNKVIEAINPDKDADGLHPLNLGYLVTGKQGIVPCTPAGIVKLLEAHRITLEGKTIAVIGRGTTVGRPLGILLSGKGVNATVINIHSRSRNISGLSRIADVVVACAGVKHIVEPSWIKPGAVVVDVGINQSGVSSSGKMILTGDVHPLTKNIASYISPVVGGVGPMTRAMLMSNVINLSERDFRKRLYAS
What is the function of this protein?
Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.
What are the official names of this protein?
Bifunctional protein FolD.
What is the protein family that this protein belongs to?
Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.
Protein: CYSG_PSEPW
Sequence: MDYLPLFHKLQGGRVLVVGGGEIALRKARLLADAGAALRVVAPEVDGQLAALAREGGGEVLVRGYQAADLVGCRLVIAATDDPGLNAQVSADAQALCVPVNVVDAPALCTVIFPAIVDRSPLVVAVSSGGDAPVLARLIRAKLETWIPSTYGELAALAARFRHKVKSLYPDVNQRRGFWETVFQGPIAERQLAGQGAEAERLLQAMVDGAPVQQGGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVAPAIIEMCRRDAERIYVGKRRAEHAVPQDQINRLLVDLAREGKRVLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVPGITAASGCSAYGGIPLTHRDYAQSVRFVTGHLKDGTSNLPWNDLVAPNQTLVFYMGLVGLPTICAELIRHGRASSTPAALVQQGTTRNQRVFTGTLADLPALVAQHEVHAPTLVIVGEVVQLREKLAWFEGSQQDQ
What is the function of this protein?
Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1.  Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin.  Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
What are the official names of this protein?
Siroheme synthase.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the precorrin methyltransferase family.
Protein: MSBA_PSEPK
Sequence: MAETPRPAEHTSSLKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARLHAMGLDEPAKADIT
What is the function of this protein?
Involved in lipopolysaccharide (LPS) biosynthesis.  Translocates lipid A-core from the inner to the outer leaflet of the inner membrane.  Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
What are the official names of this protein?
ATP-dependent lipid A-core flippase, Lipid A export ATP-binding/permease protein MsbA.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.