PharMolix/UniProtQA huggingface dataset:
Protein: RIPD2_PHYDI
Sequence: NIVFDVENATPETYSSFLTSLREAVKDKKSTCHGMIMATTTTELPKYVLVDLKLGSEKDAKTFTLAIRRGNLYLEGYSDIYNEKCRYRIFEDSESDAQQTVCPGDLTLPGSQNKIPYKKSYQSMESKGGDRTKLGLGQITLESRMNKIYGKDATDQKQFQKNEAEFLLIAVQMITEASRFKYIENKVKDSFDDAIGYKPDPKAISLETSWDKISNAIAKVNTPGNSIVTLPKGLLDENKKPWTTATMDELKNDIMGLLTHVTCKIK
What is the function of this protein?
Nicks pBR322 dsDNA.  Has adenine polynucleotide glycosidase activity on herring sperm ssDNA.
What are the official names of this protein?
Dioicin-2, Ribosome-inactivating protein, rRNA N-glycosidase.
What is the protein family that this protein belongs to?
Belongs to the ribosome-inactivating protein family. Type 1 RIP subfamily.
What are the subcellular locations of this protein?
Secreted, extracellular space. Golgi apparatus. Vacuole.
Protein: MF4B1_MOUSE
Sequence: MYAAFLGLGMSVAILGPTFQDLAENVNRNISSLSLIFVGRATGFLSGTMIGGVLFDHINQFFLLGASMVATAAGLYLIPFCKTAVLLIITMSVFGASVGVVDTGANVLILDLWGDKGAPQMQALHFSFALGAFLAPLLAKLAWGTAPAQNHTESDLDTLMLNRSSNGTSDSVFAVPDDMNLLWAYASIGTFILVVSVFLFGLFCKKHSRQKKPRASAEGARRAKYHRALLCLLFLFFFFYVGAEITYGSYIFSFATTHVGMEESEAAGLNSIFWGTFAACRGLAIFFATFLQPGTMIVLSNIGSLVSCFFLVLFDKSPLCLWIATSVYGASMAATFPSGISWIEQYTTLTGKSAAFFVIGSALGDMAIPAVIGILQGHYPDLPVVLYTCLGSAIFTAILFPVMYKLATLPLKREDQKALPTSSRL
What is the function of this protein?
May function as a sodium-dependent glucose transporter.  Potential channels for urea in the inner medulla of kidney.
What are the official names of this protein?
Sodium-dependent glucose transporter 1A, Major facilitator superfamily domain-containing protein 4B1.
What is the protein family that this protein belongs to?
Belongs to the major facilitator superfamily.
What are the subcellular locations of this protein?
Apical cell membrane; Multi-pass membrane protein.
Protein: FAD6C_SOYBN
Sequence: MACTLADSLLLFKGSYQKPVLRRDIAARYSPGIFSLNSNGLIQKRFRRQRNFVTRNKVTVIHAVAIPVQPAPVESAEYRKQLAEDYGFRQVGEPLSDDVTLKDVINPLPKEVFEIDDVKAWKSVLISVTSYALGLFMISKAPWYLLPLAWVWTGTAITGFFVIGHDCAHRSFSSNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHAKTNMLREDTAWHPVWKDEFESTPLLRKAIIYGYGPFRCWMSIAHWLMWHFDLKKFRPSEVPRVKISLACVFAFIAIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHTAPYIPFKYSEEWNRAQAQLNGTVHCDYPKWIEILCHDINVHIPHHISPRIPSYNLRAAHKSLQENWGQYLNEASWNWRLMKTIMTVCQVYDKEKSLCCLRRTCP
What is the function of this protein?
Chloroplast omega-6 fatty acid desaturase introduces the second double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes.  It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.
What are the official names of this protein?
Omega-6 fatty acid desaturase, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the fatty acid desaturase type 1 family.
What are the subcellular locations of this protein?
Plastid, chloroplast membrane; Peripheral membrane protein.
Protein: YFAH_ECOLI
Sequence: MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI
What are the official names of this protein?
Putative protein YfaH.
Protein: LDHD_HUMAN
Sequence: MARLLRSATWELFPWRGYCSQKAKGELCRDFVEALKAVVGGSHVSTAAVVREQHGRDESVHRCEPPDAVVWPQNVEQVSRLAALCYRQGVPIIPFGTGTGLEGGVCAVQGGVCVNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGADASLCGMAATGASGTNAVRYGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRFGFWPEIPHHTAWYSPCVSLGRRKSAAGYNLTGLFVGSEGTLGLITATTLRLHPAPEATVAATCAFPSVQAAVDSTVHILQAAVPVARIEFLDEVMMDACNRYSKLNCLVAPTLFLEFHGSQQALEEQLQRTEEIVQQNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGYSTDVCVPISRLPEIVVQTKEDLNASGLTGSIVGHVGDGNFHCILLVNPDDAEELGRVKAFAEQLGRRALALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNPGKVL
What is the function of this protein?
Involved in D-lactate, but not L-lactate catabolic process.
What are the official names of this protein?
Probable D-lactate dehydrogenase, mitochondrial, DLD, Lactate dehydrogenase D.
What is the protein family that this protein belongs to?
Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: TBA1A_PANTR
Sequence: MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY
What is the function of this protein?
Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers.  Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms.  Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
What are the official names of this protein?
Tubulin alpha-1A chain, Alpha-tubulin 3, Tubulin B-alpha-1, Tubulin alpha-3 chain.
What is the protein family that this protein belongs to?
Belongs to the tubulin family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: PETL_CHLVU
Sequence: MVTIFSYIALLLSALVITLTCYIGLLKIKLI
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.  PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex.
What are the official names of this protein?
Cytochrome b6-f complex subunit 6, Cytochrome b6-f complex subunit PetL, Cytochrome b6-f complex subunit VI.
What is the protein family that this protein belongs to?
Belongs to the PetL family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: ARGD1_BORPE
Sequence: MSSALANIYARLPVSFTHGRGVWLWDTGERRYLDALAGIGVSCLGHGHPGLVAAISEQAARLIHTSNIYEVPQQAALARRLAELSGMSEVLFNNSGSEANEAAIKLARYYGYKQGNTHAHIITMDSSWHGRTLATLAATGSDKARQGFGPMPSGFIQVPYNDLPAIRAAGEAEPRVTAVLLEVLQGEGGIRPSDMAFLQGVRQLCTERGWLLMIDEVQSGIGRTGKWFAHQWADIRPDVMTLAKGLAGGVPIGAMLAAGPAAGVFAPGSHGTTFGGGPLACAAGLAVIDAIEQEGLLGNAHEVGAHLHAALASELAGAPGVIEVRGRGLMLGIELDRPCGILATRAMEAGLLINVTRERVVRLLPPLILSGEEADQIVRILVPLIKQFLAQQQ
What are the official names of this protein?
Acetylornithine aminotransferase 1, ACOAT 1.
What is the protein family that this protein belongs to?
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CEC1_CAEEL
Sequence: MADGSELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASASTPARGAKAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDEEEVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEEKVEEKKEEEEEEEEEEIQLVIVEKTVIETTIVEPAVATPEPSEPSSSEKAVVENGSSSAAAGNSASKPEVSAVEVVTVEDDDDIAIIE
What are the official names of this protein?
Chromo domain-containing protein cec-1.
What are the subcellular locations of this protein?
Nucleus. Chromosome. Note=During mitosis it seems to dissociate from the condensing chromosomes.
Protein: MAD1_SCHPO
Sequence: MSSKLTVYQATTSMADSPRDPFQSRSQLPRFLATSVKKPNLKKPSVNSANETKNPKLASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKDTNLTNLEKLFADSREQLETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYRFEEYRDKVATLELENEKIQTELNSWKSLITNELPTPEAVSNKLVFLQNTNANLGERVSSLESQLSNKPANQPLGANEKDAAHITELETKLKELHEQNRRLQRQKSLATQEIDLLRENLKSYDDEEAILSEKNTDMKKLERIEGLVKLVDEYKLKLESMPVSLDVDETSDEVSLQKRRRKNEHKDAGYVTELYRKNQHLLFQVKEKTNIEAFLREQIITLESSIATLRQELAQVTEINSCRVLQHRSNPTLKYERIKAAQLEMLNAENSALKALLEDKKVDCLPIQSFKIAERKALDLKKEVAEREKRIQRLKEIFSVKSLEFREAVFSLFGYKLDFMPNGSVRVTSTYSREDNTAFIFDGESSTMKLVGNPSGPEFERLIRFWCDERKTIPGMLAALTLELLDKND
What is the function of this protein?
Central component of the spindle assembly checkpoint.  Has a role in the correct positioning of the septum.  Required for anchoring mad2 to the nuclear periphery.
What are the official names of this protein?
Spindle assembly checkpoint component mad1, Mitotic arrest deficient protein 1.
What is the protein family that this protein belongs to?
Belongs to the MAD1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: TIM16_DANRE
Sequence: MAKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQILNISTLTPEEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLDEELSINQQQQTKNKHADEQQQQT
What is the function of this protein?
Regulates ATP-dependent protein translocation into the mitochondrial matrix.
What are the official names of this protein?
Mitochondrial import inner membrane translocase subunit tim16, Presequence translocated-associated motor subunit pam16.
What is the protein family that this protein belongs to?
Belongs to the TIM16/PAM16 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Protein: RUVA_BACMK
Sequence: MFEYVTGYVEYVGPEYVVIDHNGIGYQIFTPNPYVFQRSKQEIRVYTYHYVREDIMALYGFKTREERLLFTKLLGVSGIGPKGALAILASGQTGQVVQAIEHEDEKFLVKFPGVGKKTARQMILDLKGKLADVVPDAFVDLFSDTESFDTKKGSSVELDEALEALRALGYAEREVSRVVPELLKESLTTDQYIKKALSLLLNGKR
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: CHLB_CROS5
Sequence: MKLAYWMYAGPAHIGTLRIASSFKNVHAIMHAPLGDDYFNVMRSMLERERDFTPVTASIVDRNVLARGSQEKVVNNIVRKDGEERPDLIVLTPTCTSSILQEDLANFVERAQMDAQGDVLLADVNHYRYNELQAADRTLHQIVKFYLEKARKKEQLPQGKTENPSVNIIGISTLGFHNQHDCRELKQLMKDLGIEVNEVIPDGASVHNLKNLPKAWFNLVPYRELGLTTAQYLEEEFNLPYVDITPMGVVETARCIRKIQQIINEQGTNVDYEEYINNQTLYVSQAAWFSRSIDCQNLTGKKAVVFGDNTHAAAITKILAREMGIHVVLAGTYCKYDADWFKEQVSEYCDEVLISDDNGEIGDAIARIEPSAIFGTQMERHVGKRLDIPCGVIAAPIHIQNFPIGYKPFCGYEGTNQIADLVYNSFTLGMEDHLLEIFGGHDTKEVITKGISADSDLNWNKEAQAELNKVPGFVRGKVKRNTEKFARERGFSEISLEVMYAAKEAVGA
What is the function of this protein?
Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide).  This reaction is light-independent.  The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
What are the official names of this protein?
Light-independent protochlorophyllide reductase subunit B, DPOR subunit B, LI-POR subunit B.
What is the protein family that this protein belongs to?
Belongs to the ChlB/BchB/BchZ family.
Protein: PFKA_LACCB
Sequence: MKRIGILTSGGDAPGMNAAVRAVARKAMHEGLEVYGINYGFAGLVAGDIFKMNESTVGDKIQRGGTMLYSARYPQFAQEEGQLRGVEQLNKFGIEALVVIGGDGSYHGALALTRHGFNTIGLPGTIDNDIPYTDFTIGFDTAVNTVVEAVDRLRDTAASHERTFVIEVMGREAGDIALWSGVAGGAEDVIIPEHDFDVKKIASKLQSSRERGQKHAVILLAEGVMHADQFAKELAAHGDFQLRSTVLGHIVRGGAPSARDRVLASQMGSYAVELLLQGKGALAVGIENNKITAHDVRTLFDAKHHAELSLYTLAEELTF
What is the function of this protein?
Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
What are the official names of this protein?
ATP-dependent 6-phosphofructokinase, ATP-PFK, Phosphofructokinase, Phosphohexokinase.
What is the protein family that this protein belongs to?
Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PYRB_CAMJR
Sequence: MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLEGKSITTIFFENSTRTLSSFESAARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVVRHANSGVPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGNVEGKKICIVGDIKNSRVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERHNKTVYASLKDYANDFCIQKSLAKDKKLILLHPGPVNRNIDISDEMMSDERTLVLKQVKNGVAIRMAVLKKLILENEG
What are the official names of this protein?
Aspartate carbamoyltransferase, Aspartate transcarbamylase, ATCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
Protein: PI42A_CHICK
Sequence: MAAPGTVASVMASKTKTKKKHFVVQKVKLFRASDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLANDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVEIYMIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTFKDNDFINDGQKIHIDENNKRMFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEDEGESDGTHPIGTPPDSPGNTLNSSLPLAPGEFDPAIDVYGIKSHESAPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFLDFIANILT
What is the function of this protein?
Catalyzes the phosphorylation of phosphatidylinositol 5-phosphate (PtdIns5P) on the fourth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2).  Has both ATP- and GTP-dependent kinase activities.
What are the official names of this protein?
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, 1-phosphatidylinositol 5-phosphate 4-kinase 2-alpha, Diphosphoinositide kinase 2-alpha, Phosphatidylinositol 5-phosphate 4-kinase type II alpha, PI(5)P 4-kinase type II alpha, PIP4KII-alpha, PtdIns(5)P-4-kinase isoform 2-alpha.
What are the subcellular locations of this protein?
Cell membrane. Nucleus. Lysosome. Cytoplasm.
Protein: GPMA_AGRVS
Sequence: MTGTLVLVRHGQSDWNLKNLFTGWRDPDLTDLGVQEANAGGKALKDYGIQFDIAFTSDLSRAQKTCGIILDNLGQSGLETIRDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDIPPPGGESLRDTGARVWPYYLTEILPRVLRGEKVLVAAHGNSLRSLVMVLDKLTKEQILSVNLATGVPMVYKLNADSTVASKDVLGDMSGAH
What is the function of this protein?
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
What are the official names of this protein?
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, BPG-dependent PGAM, PGAM, Phosphoglyceromutase, dPGM.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.
Protein: GATA_OENOB
Sequence: MTDFFNENLTSLHKKLVDKEISATELTKEALNKSKSSQSEINAFITIDDEGALKRAAEIDAVGIDPDNILSGIPFAIKDNIVTKGLKTTAASHILDNFVPVYDATVIEKLNELGIVTIGKTNMDEFAMGGSTETSYFGKTANAWDHTKVPGGSSGGSASSVASGVIPVALGSDTGGSIRQPAAFNGIVGLKPTYGRVSRWGLIAFGSSLDQIGPLTRTVEDNARVLAAISGKDQRDTTTEDQSVPDFTKGIKKGVKDLRIGVPKEYFAKGIDEGVKDVVKKAIAKYESLGAKVDEVSLPHSKYGIAAYYILASSEASSNLERFDGIRYGFSARQDGQTLEDLYVRTRSEGFGDEVKRRIMLGTFALSAGFYDAYFKKAAQVRTLIVNDFAKVFENHDIILGPTTTSPAFDLGSENDDPVKMYMNDLLTIPLNLAGLPGMSINAGFTDGLPVGLQIIGKRFDESTIYKTAYAFEQDSQLFTKHPGVNF
What is the function of this protein?
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase.  The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Glutamyl-tRNA(Gln) amidotransferase subunit A, Glu-ADT subunit A.
What is the protein family that this protein belongs to?
Belongs to the amidase family. GatA subfamily.
Protein: RK20_CITSI
Sequence: MTRIRRGYIARRRRTKMRLFVSSFRGAHSRLSRTITQQKIRALVSAHRDRDRKKRDFRRLWITRINAVIRGNLVSYSYSRLIYNLYKAQLVLNRKILAQIAISNRNCLYMISNEIIK
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RS17_AZOSB
Sequence: MSEQVEKVRRALIGRVVSDKMQKTVTVLVERRVKHPLYGKIITRSAKYHAHVEDGGAGEGDLVEIEECRPISRTKTWRVTRVVEKARVI
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: RUVA_STRPQ
Sequence: MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQVIREDAHLLFGFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGHTKARSNKAGNTQLDEAIEALLALGYKAKELKKIRAFFEGTSETAEQYIKSALKLLMKG
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: PME67_ARATH
Sequence: MGHRTRMILVLTLVVMSIWGSDASAMQKTKFDAPLLTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGKVYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWLPVWLQEKF
What is the function of this protein?
Acts in the modification of cell walls via demethylesterification of cell wall pectin.
What are the official names of this protein?
Probable pectinesterase 67, PE 67, Pectin methylesterase 67, AtPME67.
What is the protein family that this protein belongs to?
Belongs to the pectinesterase family.
What are the subcellular locations of this protein?
Secreted, cell wall.
Protein: RR19_SPIOL
Sequence: MTRSLKKNPFVANHLLRKIEKLNKKAEKEIIVTWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR
What is the function of this protein?
Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus.
What are the official names of this protein?
30S ribosomal protein S19, chloroplastic, CS-S23, Chloroplastic small ribosomal subunit protein uS19c.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: ABNB_ASPTN
Sequence: MRRIIKILVVVAVLYLAIIFLFANTRRVVPIHRQTPFPPTHPADLKIHDPSILKVGDKYYSYSVGPRIVIHEAPTLSGPWKKTGHVLDKDSIIPKGDRKAPWAPTTIEVAGTYYCYYAVSQSGCRNSAIGVATSQSPGPGGWTDHGAIIHTGTGPGSDSAPFDRSNAIDASVILTPDGNGYLNFGSYWTGIWQVPLNADLVSISDVSTNAARHLAYEPHAFSPGGKNPNPLCGDRSGSHPIEGAFVSYRAPFYYLWFSWGKCCKYNPKALPPRGKEYQIRVGRSTHPQGPFVDRQGVDLIEGGGEVVYGSNRDVYAPGGQGVLTDEGTDILYYHYLNKTVSLDFWEARLGYNPLIYIDGWPVAQ
What is the function of this protein?
Endo-1,5-alpha-L-arabinanase involved in degradation of pectin.  Its preferred substrate is linear 1,5-alpha-L-arabinan (By similarity).
What are the official names of this protein?
Probable arabinan endo-1,5-alpha-L-arabinosidase B, Endo-1,5-alpha-L-arabinanase B, ABN B.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 43 family.
What are the subcellular locations of this protein?
Secreted.
Protein: RNP1_METJA
Sequence: MITPHNILRHELIGLKVEIVEAKNKAMIGIKGKVVDETRNTLVIEKEDGREVVIPKDIAVFLFQLKGCKVKVDGRLLIGRPEERLKKKIKILYPY
What is the function of this protein?
Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
What are the official names of this protein?
Ribonuclease P protein component 1, RNase P component 1, Rpp29.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic/archaeal RNase P protein component 1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL36_CAUVN
Sequence: MKVRSSLKSLKGRHRDCKMVRRKGVIYIINKTDPRFKAKQG
What are the official names of this protein?
50S ribosomal protein L36.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL36 family.
Protein: TRBB_RHIRD
Sequence: MTQLRSHPRLVRKLQDSLGDQLCVALDDATVVEIMLNPDGRLFIERLGHGVVAAGAMTPAAAEVVIGSVAHALQSEADDERPIISGELPIGGHRFEGLLPPIVSGPAFTIRRRASRLIPLDDYVTSKVMTEAQASAIRSAIDSRMNIVISGGTGSGKTTLANAIIAEIVTAAPDDRLVILEDTAEIQCAAENAVSLHTSDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVTTIHSNTALSALRRLEQLTAEASQQLMQEVIGEAVDLIVSIERSGKGRRVREVIHIEGYRNNHYQTEHYAQIEEDSHVA
What are the official names of this protein?
Conjugal transfer protein TrbB.
What is the protein family that this protein belongs to?
Belongs to the GSP E family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SSRP_STRP1
Sequence: MAKGEGHILAQNKKARHDYHIVETVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNADPERTRKLLLKKREITHLANELKGSGMTLVPLKVYLKDGFAKVLIGLAKGKHEYDKRETIKRRDQERDIKKQMKHYNAR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: GCSPA_BACLD
Sequence: MKHRYLPATDQDKKEMLEAIGVERIDELFSDIPESVRFKGEYQIKKAKSETELTKELTKLAAKNKDTVTYASFLGAGVYDHYQPVIVDHVISRSEFYTAYTPYQPEISQGELQAIFEFQTMICELTGMDISNSSMYDGGTALAEAAMLASGHTKKKKIVVSETVHPESREVLKTYAKGQYIDVVEVPSKNGTADLEALDEAVCEDTAAVIVQYPNFFGRIEPLKDIKPIAHKGKSMFIVSANPLALGLLTPPGALGADIVVGDAQPFGIPAAFGGPHCGFFAVTKKLMRKVPGRLVGQTEDENGKRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKKGVKEIAWQNLQKAAYAKEAAKRAGLEVAFEGPMFNEFVIRLNEPVEKANERLLEKNIIGGYDLGASYPDLKRHMLIAVTELRTKEEIDTLMNELGDCHE
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Probable glycine dehydrogenase (decarboxylating) subunit 1, Glycine cleavage system P-protein subunit 1, Glycine decarboxylase subunit 1, Glycine dehydrogenase (aminomethyl-transferring) subunit 1.
What is the protein family that this protein belongs to?
Belongs to the GcvP family. N-terminal subunit subfamily.