PharMolix/UniProtQA huggingface dataset:
Protein: SYS_ACIF2
Sequence: MLDPSLLRSSPETVAAGLARRHFTLDVAALNALDQQRKALQIQLEQLRNARNEASRQIGQARRQGLDTGAMQAAAASNGEEIKTLEQSLERTLAEWDTLTIGLPNIPQDSVPDGRDEADNVVLRHWGSPSTFAFPPRDHVELGEALGIIDFAAGARLAGTRFVVLRGAGARLERALTQFMLDLHTTEHGYTEIAPPFLANADSLYGTGQLPKFEEDLFALRDDPYYLIPTAEVPLTNLLRGEIVASLPQRFCAYTPCFRREAGAYGRDTRGMIRQHQFDKVELVQIVRPEDSAQAHETLTAHAEKVLQLLELPYRVTALCAGDLGFSAAKTYDLEVWLPGQNQYREISSCSNFESFQARRLQLRYRAEDGKPQLVHTLNGSGLAVGRTLVALLENHQQADGRIRIPAALRPYLGGMTVIQA
What is the function of this protein?
Catalyzes the attachment of serine to tRNA(Ser).  Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
What are the official names of this protein?
Serine--tRNA ligase, Seryl-tRNA synthetase, SerRS, Seryl-tRNA(Ser/Sec) synthetase.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: COAW_STAEQ
Sequence: MKIGIDAGGTLIKIVQEHDNRRYYRTELTTNIQKVIDWLNNEEIETLKLTGGNAGVIADQIHHSPEIFVEFDASSKGLEILLDEQGHQIEHYIFANVGTGTSFHYFDGKDQQRVGGVGTGGGMIQGLGYLLSNITDYKELTNLAQNGDRDAIDLKVKHIYKDTEPPIPGDLTAANFGNVLHHLDNQFTSANKLASAIGVVGEVITTMAITLAREYKTKHVVYIGSSFNNNQLLREVVENYTVLRGFKPYYIENGAFSGALGALYL
What is the function of this protein?
Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
What are the official names of this protein?
Type II pantothenate kinase, PanK-II, Pantothenic acid kinase.
What is the protein family that this protein belongs to?
Belongs to the type II pantothenate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MTC6_YEAS8
Sequence: MWILIYLFIIWSSLRTWVTAVDSTTTVGDDLNETVSASVWPTMSPQMTVAFRSQRDVMGNLTIDQLPYVGLNLRRVLLNNETSMVNEGNNTRLLTLFKSMLSSEANAFVLDLEQYNNDLRVVDTTLLFSDVLIALESFIFSTQNNLYANIIVLLLNISAPELDSTEYRHQNQTLNTTYILDKNLGNSFIYKPTDLQSDRAKNNTWNIYGKSSIDGWPTLGSVLYEQKKRLVIGELTDFFNETTAPYIFPHDVFHYEQGNSTLDCPSTVEGLTDLSSIHWRFLDSLFNSVDIKEYISCGLSPIISNSAYVNNVTQLADIIHEGSVWSWDSDQPSVTQSTSKSGSSSGTLEAYNCVLLYYFANNETVTWRVGNCYNSNIGLCRYENMAFRWLVRSNKATYFDFDSYQGSKCPDQYSFNIPRSPLEQRSFIAYMRNSSFSDTQIWIDLNSISVSNCWVSGGPYASCPYEKVISRRNFVTMMVPASVCSFALLCIVVYLSVLRVPIYDNRKNWRRVINKISKSELEGVPS
What is the function of this protein?
May be involved in telomere capping.
What are the official names of this protein?
Maintenance of telomere capping protein 6.
What is the protein family that this protein belongs to?
Belongs to the MTC6 family.
What are the subcellular locations of this protein?
Membrane; Single-pass type I membrane protein.
Protein: TREF_SALSV
Sequence: MLNQKLNPTPSEDLTIDVDLLYETDPCELKLDEMIEAEPEPEMIEGLPASDALTPADRYLELFEHVQSTKLFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLRRFVENHFWLPETLSSEYVSNPENSLKEHIDQLWPILTREPQDHIPWSSLLALPQSYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLALNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDAGRLASIRTTQFIPIDLNAFLYKLESAIANISALKGERDTEALFRQKASDRRAAVNHYLWDDENGCYRDYDWRREEMALFSAASIVPLYVGMANHEQADRLANVVRSRLLTPGGIMATEYETGEQWDKPNGWAPLQWMAIQGFKLYGDDMLGDEIAHNWLKTVNHFYQEHHKLIEKYHISGGTPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP
What is the function of this protein?
Hydrolyzes trehalose to glucose.  Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity.
What are the official names of this protein?
Cytoplasmic trehalase, Alpha,alpha-trehalase, Alpha,alpha-trehalose glucohydrolase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 37 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CYB_PSAVE
Sequence: MMNLRKNHPLLKMVNHSFIDLPTPPNISSWWNFGSLLGICLVIQIATGLFLAMHYTADTTTAFSSVSHICRDVNYGWLIRYMHANGASMFFICLFIHIGRGIYYGSYIFTETWNIGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGPTIVEWIWGGFSVNKATLTRFFAFHFILPFIIAALVLVHLLFLHETGSNNPLGLNSNADKIPFHPYYTVKDFLGGGLLIFFFMLLVLFFPDMLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILIFLPLIHTSKQRSLMFRPISQMLYWILIANLIILTWIGGQPVGDPFIIIGQLASISYFSIILILLPIAGIIEDKLLKWYLCL
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: RNH_FRATN
Sequence: MEIFKKKNRVIAYTDGACKGNPGIGGWGAILSYNGVDKEIYGSEKDTTNNRMELMAAIKTLQALKRKCDITIYTDSKYLQNGINEWLANWKANGWKTAAKKEVKNKDLWQELDSLTNKHNVTWGWVKGHSGNAGNEKADELANKAIAELIGK
What is the function of this protein?
Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
What are the official names of this protein?
Ribonuclease H, RNase H.
What is the protein family that this protein belongs to?
Belongs to the RNase H family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RIMP_VIBVY
Sequence: MTGLERQLTEMLESAVVASGYELVGLEFIRAGEHSTLRIYIDHENGITVEDCAEVSHQVSAVLDVEDPISVAYSLEVSSPGLDRPLFKPAHYEQFIGQEVNVVLKMAVANRRKWKGEIHSVDGEAITLTVDGQQEEFALSNISKANLIPKF
What is the function of this protein?
Required for maturation of 30S ribosomal subunits.
What are the official names of this protein?
Ribosome maturation factor RimP.
What is the protein family that this protein belongs to?
Belongs to the RimP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AROC_SULIA
Sequence: MPGNSFGKLFRVTTFGESHGPAVGVVIDGVPAGLPLTVEDIKFELEFRRPGRLYVSGRREKDEPEILSGIFNNRTTGSPIAVIVRNTDVVSSFYEEIRYKPRPGHADLPFIMKYGYENWDYRGGGRASARETVGRVIAGAVAKKLLMLADTWIAGHLRSLGPEELNEEVTFEEVLCSKYSPVRASKKVLEEKYEALIKKATQEGDSYGGIAEVITKNPPIGLGEPVFDKMKAELAKAIMSIPAVTGFEYGLGFMVSKMKGSEANDEIIRKDNKIGWKYNYAGGILGGLTNGEDLIVRCAFKPTSSIRKPQKTIDLRNLEETYISVIGRHDPAVAIRGVTVVESMVALTLVDHAMRAGVIPLVKLTEEQGNIVQQRWERYVRSCKPMEESQL
What is the function of this protein?
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis.  This reaction introduces a second double bond into the aromatic ring system.
What are the official names of this protein?
Chorismate synthase, CS, 5-enolpyruvylshikimate-3-phosphate phospholyase.
What is the protein family that this protein belongs to?
Belongs to the chorismate synthase family.
Protein: FABZ_ECO7I
Sequence: MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA
What is the function of this protein?
Involved in unsaturated fatty acids biosynthesis.  Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
What are the official names of this protein?
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase, (3R)-hydroxymyristoyl-ACP dehydrase, Beta-hydroxyacyl-ACP dehydratase.
What is the protein family that this protein belongs to?
Belongs to the thioester dehydratase family. FabZ subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEF06_ARATH
Sequence: MENKFFAAFFLLLVLFSSQEIIGGEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCYCTRLC
What is the function of this protein?
Confers broad-spectrum resistance to pathogens.
What are the official names of this protein?
Defensin-like protein 6, Low-molecular-weight cysteine-rich protein 74, Protein LCR74, Plant defensin 2.5.
What is the protein family that this protein belongs to?
Belongs to the DEFL family.
What are the subcellular locations of this protein?
Secreted.
Protein: RNB_VIBPA
Sequence: MFQDNPLLAQLKQQIQENLPKKEGSIKATDKGFGFLEVDSKTSFFIPPAYMKKCIHGDKVVAIIRTENEREVAEPQELIEQSLTRFIGRVKMFKGKLNVVPDHPQLKKLSLKAKLKKGLKPDNFAEGDWVVAHLVRHPLKGDNTFFVEISEKITDADDKIAPWWVTLAQNDLPNSEPAGIENWELKDDADLERIEMTHVPFVTIDGESTKDMDDALYAKKTESGDFELTIAIADPTAYITPEDEMDKVARERGYTIYLPGRNIPMLPRDLADNLCSLIEGEIRPAICCTVTVSKDGVIGDDIKFFAANIKSHARLAYDHVSDWLENGNSDAWQPSEEIATIVRDLYEFSLARAEWREKNAVVFPDRPDYRFELSEDNDVIAIHADMRRSANRLVEESMITANICAGRTLREKFETGVFNTHAGLKPEKIEEVVQLVNPEGTLEFTAESIATLEGFAALRRWLAVQETSYLDNRIRKFQAYSEVGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAVILDKEPVQKPDDQVGEELALHRKHHKIAERNVSDWLYARTLADEPSKQTCFTGEIFDINRAGARVRLLENGAAAFIPGALILDNKERIECNGDNGTISIDKEVVYKLGDTLEIVLADVNQENRSLVAKPTQVFADQPAPQTEQTVSEE
What is the function of this protein?
Involved in mRNA degradation.  Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.
What are the official names of this protein?
Exoribonuclease 2, Exoribonuclease II, RNase II, Ribonuclease II.
What is the protein family that this protein belongs to?
Belongs to the RNR ribonuclease family. RNase II subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PCS1_CAMPL
Sequence: MGKVNEVLFMNRGEGEISYAQNSAFTQKVASMAMPALENAVETLFSKDFHLLQALTAADLGCAAGPNTFAVISTIKRMMEKKCRELYCQTLELQVYLNDLFGNDFNTLFKGLSSQVVGNKCEEVSCYVMGVPGSFHGRLFPRNSLHLVHSSYSVHWLTQAPKGLTSREGLALNKGKIYISKTSPPVVKKAYLSQFHEDFTMFLNARSQEVVPNGCMVLILHGRQSSDPSEMESCFTWELLAIAIAELVSQGLIDKDKLDTFNVPSYWPSLEEVKDIVERDGSFTIDHLEGFELDSLEMQEDDKWVRGDKFAKMVRAFTEPIISNQFGQEIMDKLYDKFTHILVSDLEAELPKTTSIILVLSKIVG
What is the function of this protein?
Involved in the biosynthesis of caffeine (PubMed:16333668, PubMed:30303011).  Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine, and, to some extent, the conversion of paraxanthine to caffeine, but seems not able to convert theobromine to caffeine (PubMed:16333668, PubMed:30303011).
What are the official names of this protein?
7-methylxanthine methyltransferase PCS1, TCS1c, Theobromine synthase PCS1.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. Type-7 methyltransferase family.
Protein: SDH_RHIRD
Sequence: MSGTILITGATSGFGQATAQRFVKEGWKVIGTGRRAERLEALSAELGSAFHGVAFDITDEEATKKALAGLPDGFRDIDILVNNAGLALGTAPAPQVPLKDWQTMVDTNITGLLNVTHHLLPTLIERKGIVINLSSVAAHYPYLGGNVYGGTKAFLRQFSLGLRSDLHGKGVRVTSIEPGMCETEFTLVRTGGNQEASDNLYKGVNPITADDIANTIHWVASQPKHININSLELMPVNQSFAGFQVYRES
What is the function of this protein?
Catalyzes the oxidation of the hydroxyl group of serine to form 2-aminomalonate semialdehyde which is spontaneously converted into 2-aminoacetaldehyde and CO(2).  Also acts on D-serine, L-glycerate, D-glycerate and 2-methyl-DL-serine.  Does not act on O-methyl-DL-serine and L-threonine.
What are the official names of this protein?
Serine 3-dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Protein: PRT2C_ONCMY
Sequence: MPRRRRSSRRPVRRRRRPRVSRRRRRRGGRRRR
What is the function of this protein?
Protamines substitute for histones in the chromatin of sperm during the haploid phase of spermatogenesis.  They compact sperm DNA into a highly condensed, stable and inactive complex.
What are the official names of this protein?
Protamine-2C.
What are the subcellular locations of this protein?
Nucleus. Chromosome.
Protein: VATE_CLOPS
Sequence: MSNLNNLTSKILNDAEEKKKYILAEAEAQKDKIISKKTNRAEADKEEIITKANIEAEVKKARIISNAKLSVRNDMLRAKQDVISKVFNEAIEKLQNLSNGDYKYYVISTLDSLELEGTEVIIINEKDKDIFSNEFLEALNKELESKGKKGSITLNMEGKFNGGFILDRNGIQINNTFEALINSLRGELEFEVNKVLFD
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
V-type ATP synthase subunit E, V-ATPase subunit E.
What is the protein family that this protein belongs to?
Belongs to the V-ATPase E subunit family.
Protein: HV313_HUMAN
Sequence: MELGLSWVFLVAILEGVQCEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQATGKGLEWVSAIGTAGDPYYPGSVKGRFTISRENAKNSLYLQMNSLRAGDTAVYYCAR
What is the function of this protein?
V region of the variable domain of immunoglobulin heavy chains that participates in the antigen recognition (PubMed:24600447).  Immunoglobulins, also known as antibodies, are membrane-bound or secreted glycoproteins produced by B lymphocytes.  In the recognition phase of humoral immunity, the membrane-bound immunoglobulins serve as receptors which, upon binding of a specific antigen, trigger the clonal expansion and differentiation of B lymphocytes into immunoglobulins-secreting plasma cells.  Secreted immunoglobulins mediate the effector phase of humoral immunity, which results in the elimination of bound antigens (PubMed:22158414, PubMed:20176268).  The antigen binding site is formed by the variable domain of one heavy chain, together with that of its associated light chain.  Thus, each immunoglobulin has two antigen binding sites with remarkable affinity for a particular antigen.  The variable domains are assembled by a process called V-(D)-J rearrangement and can then be subjected to somatic hypermutations which, after exposure to antigen and selection, allow affinity maturation for a particular antigen (PubMed:20176268, PubMed:17576170).
What are the official names of this protein?
Immunoglobulin heavy variable 3-13, Ig heavy chain V-III region BRO.
What are the subcellular locations of this protein?
Secreted. Cell membrane.
Protein: GUN5_THEFU
Sequence: MAKSPAARKGXPPVAVAVTAALALLIALLSPGVAQAAGLTATVTKESSWDNGYSASVTVRNDTSSTVSQWEVVLTLPGGTTVAQVWNAQHTSSGNSHTFTGVSWNSTIPPGGTASSGFIASGSGEPTHCTINGAPCDEGSEPGGPGGPGTPSPDPGTQPGTGTPVERYGKVQVCGTQLCDEHGNPVQLRGMSTHGIQWFDHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGDPHYNLDRAKTFFAEIAQRHASKTNVLYEIANEPNGVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVNASNIMYAFHFYAASHRDNYLNALREASELFPVFVTEFGTETYTGDGANDFQMADRYIDLMAERKIGWTKWNYSDDFRSGAVFQPGTCASGGPWSGSSLKASGQWVRSKLQS
What are the official names of this protein?
Endoglucanase E-5, Cellulase E-5, Cellulase E5, Endo-1,4-beta-glucanase E-4.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 5 (cellulase A) family.
Protein: PYRC_ALKCK
Sequence: MAMKVTGGFILDENGEQVAKDVYIKDGKIVEHVADGDIRQQFDATGLLISPGFVDVHVHLREPGGEKKETIETGTKAAARGGFTTVAAMPNTRPVPDNAEQLDLLQARISETAVVRVLPYASITTRQLGQELTDFKALKEAGAFAFTDDGVGIQEAGMMLSAMKEAAALNMAVVAHCEDNSLINGGAVHEGHYAKAHGLNGIPSVCEAVHIARDVLLAEAAGAHYHVCHVSTKESVRTIRDAKKAGIRVTAEVTPHHLLLCEDDIIGKDPNFKMNPPLRAKEDRDALVAGLLDGTIDFIATDHAPHTAEEKSASLERAPFGIVGLETAFPLLYTHFVKPGTFTLKQLIDWLTVKPAQTFNLPYGTLQVGAAADLTLIDLKANETIDPSMFLSKGKNTPFAGWDCAGIPQATMVAGKTVYKKERITNE
What is the function of this protein?
Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
What are the official names of this protein?
Dihydroorotase, DHOase.
What is the protein family that this protein belongs to?
Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
Protein: OTC_STRCO
Sequence: MATVPTALAGRHFLKELDFTEEEFRGLIELAAELKAAKRAGTETRYLQGRNIALIFEKTSTRTRCAFEVAAADQGASTTYLDPAGSQIGHKESVKDTARVLGRMFDGIEYRGDSQTKVEELAAFAGVPVYNGLTDDWHPTQMLADVLTMTEHSDRPLREITFAYLGDARFNMGNSYLVTGALLGMDVRIVAPKSYWPAQEVVDRAHRLAAASGARITLTEDVAEGVRGAGFVVTDVWVSMGEPKEVWAERIKALAPYAVTMDVLRATGNPDVRFLHCLPAFHDLGTKVGQEIFEAHGLDSLEVTDEVFESAHSVVFDEAENRLHTIKAVLVATLA
What is the function of this protein?
Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
What are the official names of this protein?
Ornithine carbamoyltransferase, OTCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PSBT_NEOYE
Sequence: MEALVYVFLLTGTLMVIFFAIFFREPPRIAK
What is the function of this protein?
Seems to play a role in the dimerization of PSII.
What are the official names of this protein?
Photosystem II reaction center protein T, PSII-T.
What is the protein family that this protein belongs to?
Belongs to the PsbT family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: RL6_PYRAE
Sequence: MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIVMEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPMLVKVQGNQLVIENFLGRKSKITLNIPKGVKVEVKGKEDIVIEGIDRELVSTFAAAVQAATELHGDERPSPHGREGGLGVVDGIYVVGYEHIKS
What is the function of this protein?
This protein binds to the 23S rRNA, and is important in its secondary structure.  It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
What are the official names of this protein?
50S ribosomal protein L6.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL6 family.
Protein: EX7S_DESVV
Sequence: MAGRKKAADFEQQLARLQEIVDALEGGDLPLEKSVALYKEGLGLARASREQLAKARNEIRLFTEGEVRDFDPEEGDDGDDR
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS13_SORC5
Sequence: MARIAGVDLPRRKHVAYALPYLFGIGRTLALQICEKTNIPQNKRVEELSDAEVKAIRDLLDAEYKVEGDLRREVQLNIKRLMDLGCYRGLRHRRGLPANGQRTHTNARTRKGPRKGMLQRRPAATK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: GATC_SACS2
Sequence: MKIEVNENLIKHLENLSLIQLSGEEEKILEKDLANIIKFFEKINELDLSNVEPLFHPLPQGRLRKDVPRDPLDRENALKNVKRKEDGYIVGPRTYGE
What is the function of this protein?
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases.  The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Glutamyl-tRNA(Gln) amidotransferase subunit C, Glu-ADT subunit C.
What is the protein family that this protein belongs to?
Belongs to the GatC family.
Protein: CSPLH_POPTR
Sequence: MPNNEAKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARYSYSPEFKFLAFTNIVVGCFSLLSLLFLVLVVRQGSNPNHYFFLFLHDLAMMSLVVGGCAAATTVGFLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSASKSRKMEA
What are the official names of this protein?
CASP-like protein 1F1, PtCASPL1F1.
What is the protein family that this protein belongs to?
Belongs to the Casparian strip membrane proteins (CASP) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: HEMA_I02A7
Sequence: VLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVERASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIFPKSSWPNHEASSGVSSACPYQGRSSFFRNVVWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQREIRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYPHYSEEARLNREEISGVKLESIGTYQILSIYSTVASSLALAIMV
What is the function of this protein?
Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell.  This attachment induces virion internalization either through clathrin-dependent endocytosis or through clathrin- and caveolin-independent pathway.  Plays a major role in the determination of host range restriction and virulence.  Class I viral fusion protein.  Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane.  Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide.  Several trimers are required to form a competent fusion pore.
What are the official names of this protein?
Hemagglutinin.
What is the protein family that this protein belongs to?
Belongs to the influenza viruses hemagglutinin family.
What are the subcellular locations of this protein?
Virion membrane; Single-pass type I membrane protein. Host apical cell membrane; Single-pass type I membrane protein. Note=Targeted to the apical plasma membrane in epithelial polarized cells through a signal present in the transmembrane domain. Associated with glycosphingolipid- and cholesterol-enriched detergent-resistant lipid rafts.
Protein: CTPJ_MYCTO
Sequence: MAVRELSPARCTSASPLVLARRTKLFALSEMRWAALALGLFSAGLLTQLCGAPQWVRWALFLACYATGGWEPGLAGLQALQRRTLDVDLLMVVAAIGAAAIGQIAEGALLIVIFATSGALEALVTARTADSVRGLMGLAPGTATRVGAGGGEETVNAADLRIGDIVLVRPGERISADATVLAGGSEVDQATVTGEPLPVDKSIGDQVFAGTVNGTGALRIRVDRLARDSVVARIATLVEQASQTKARTQLFIEKVEQRYSIGMVAVTLAVFAVPPLWGETLQRALLRAMTFMIVASPCAVVLATMPPLLAAIANAGRHGVLAKSAIVMEQLGTTTRIAFDKTGTLTRGTPELAGIWVYERRFTDDELLRLAAAAEYPSEHPLGAAIVKAAQSRRIRLPTVGEFTAHPGCRVTARVDGHVIAVGSATALLGTAGAAALEASMITAVDFLQGEGYTVVVVVCDSHPVGLLAITDQLRPEAAAAISAATKLTGAKPVLLTGDNRATADRLGVQVGIDDVRAGLLPDDKVAAVRQLQAGGARLTVVGDGINDAPALAAAHVGIAMGSARSELTLQTADAVVVRDDLTTIPTVIAMSRRARRIVVANLIVAVTFIAGLVVWDLAFTLPLPLGVARHEGSTIIVGLNGLRLLRHTAWRRAAGTAHR
What are the official names of this protein?
Probable cation-transporting P-type ATPase J.
What is the protein family that this protein belongs to?
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: MUTS_CHLPM
Sequence: MAAKKSGASKELSPMMRQYLDVKKQYADYLLLFRVGDFYETFFDDAATISAAVNIVLTRRSNGSAPDIPMAGFPYHASEGYIARLVRKGFKVAVCEQVEDPAEAKGIVKREITEIVTPGVTYSDSILEDRHNNYLAAVAFLKEGRTPVAGIAYLDVTTAEFRIASLPPHSLRDTILSLGPAELLVSSSEKSRLEDLVRGYATGMLVTGLDDWMFSEEQAETVLSRQFRTHSLKGFGIEGNRAGRVAAGVVLQYLDETRQSRRAYITRISEMQGGEFMTLDLQTKRNLEIVSSMQDGSPHGSLLQVMDRTVNPMGARLIRRWLQRPLRVAEAIAERHDGVEELLQSSELSEGVRCSLSEINDLERSLARIATFRTSPREVLQMGRSLAVFPQLRDLLLPALSARLRSLAAVLQPLPELVSEIERSVDPECGATVRDGGYIRSGCNDELDELRSVSSMAKERLMDIQREEREKTGISSLKVQYNRVFGYYIEISRANLDRVPEGYMKKQTLVNAERYTIPALKAYEEKILNAEERSLRLEAEIFQALCASIAERAASIQESALAIAEIDTLASFALSAKEYGYCKPEMKEHEGLLITEGRHPVLERIMKPDEPFVKNDCHFDGQQRMLMITGPNMAGKSSYLRQTGLIVLLAQAGSFVPAERAEIGMVDRIFTRVGASDNLASGESTFLVEMNEAASILNNATSSSLILLDEIGRGTSTFDGMSIAWSMSEYIITRLGARTLFATHYHELSELEERLPGVVNYNATVVESGERVIFLRKIVRGSTDNSYGIEVARMAGMPNEVIERAREIMSGLERKDVSFADRSFSVQENMQISLFDEVDSRLKTALQDLDLERLTPIEALLELEKLQKLLRGHS
What is the function of this protein?
This protein is involved in the repair of mismatches in DNA.  It is possible that it carries out the mismatch recognition step.  This protein has a weak ATPase activity.
What are the official names of this protein?
DNA mismatch repair protein MutS.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutS family.
Protein: YA8O_SCHPO
Sequence: MYNTYAIIVHVSKLRNSHLFANASAIPNLQAVIRKKLLDSMKSRQKDVASTLKVFLSEIEYANKSSKPVTTDLDVLRVLKKNIKKRKQAIEQFRKAERLDLAEKEESQIQTLRQFLPEHASNI
What are the official names of this protein?
Uncharacterized protein C22F3.15.