PharMolix/UniProtQA huggingface dataset:
Protein: GLGB_RHOP2
Sequence: MTVQLTDDAYAVLEGRHADPFRYLGPHPEDDRVVVRALLPDATAVEAVGEHGETAILERVHDAGLFAGPLPNGSHRYQLRARFGDTTVDLEDPYRFPPILTEFDLYLLGEGTDQRLYDKLGAHPMVLEGVRGVGFVVLAPNARRVSVVGDFNFWNPRRHQMRVRGNGYWELFIPGATAGDHYKFDMTGPNGETLPQKSDPMAFAAEMRPKTASIVVDQTRLPLPRPAPDNINALGAPMSIYEVHLGSWRRKDGEQWLTYRELAEQLPAYVRDMGFTHVEFLPVSEHPFDGSWGYQPTGLFAPTSRFGTPEDFCALIDACHEHGIGVLLDWVPGHFPDDPHGLGNFDGTALYEHANPLQGRHLDWGTLIYNYGRTEVVNFLVSNALFWLERYRIDGLRVDAVASMLYLDYSRPAGGWIPNKFGGRENIEAIDFLRRFNAEVYAKFPQATTAAEESTAWPQVSRPVEFGGLGFGYKWNMGWMHDTLNYISKDPIHRKYHHGQILFGLHYAFSENFILPLSHDEVVHGKRSILGRMPGDEWQRFANLRAYYAFMFAHPGKKLMFMGSEFGQEREWNHDRSLDWHLLDTPKYAGIQALVRDLNRLYRDLPALHQLDCDPFGFEWIITEDAARNVFAWMRKGNDTRARCLVIVNFSPNVYQDYRVRVPFPGRWREVLNSDAAIYGGSNVGNAGEVRTLEGLVPELSLNIPPLAAIFLKPED
What is the function of this protein?
Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
What are the official names of this protein?
1,4-alpha-glucan branching enzyme GlgB, 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase, Alpha-(1->4)-glucan branching enzyme, Glycogen branching enzyme, BE.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
Protein: UPPP_ECOBW
Sequence: MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPAVVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMIGCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGFLTSGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF
What is the function of this protein?
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP).  Confers resistance to bacitracin.
What are the official names of this protein?
Undecaprenyl-diphosphatase, Bacitracin resistance protein, Undecaprenyl pyrophosphate phosphatase.
What is the protein family that this protein belongs to?
Belongs to the UppP family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: UBC5B_ORYSJ
Sequence: MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG
What is the function of this protein?
E2 conjugating enzyme that associates with the E3 ubiquitin-protein ligase EL5 to mediates ubiquitination of target proteins.
What are the official names of this protein?
Ubiquitin-conjugating enzyme E2 5B, E2 ubiquitin-conjugating enzyme 5B, Ubiquitin carrier protein 5b, OsUBC5b, Ubiquitin-protein ligase 5B.
What is the protein family that this protein belongs to?
Belongs to the ubiquitin-conjugating enzyme family.
Protein: PYRE_BACC0
Sequence: MKKEIASHLLEIGAVFLQPNDPFTWSSGMKSPIYCDNRLTLSYPKVRQAIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGNQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYSALTEVAAEKGMIGQAETKKLQEWRKNPADEAWITA
What is the function of this protein?
Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
What are the official names of this protein?
Orotate phosphoribosyltransferase, OPRT, OPRTase.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.
Protein: SHOC1_ARATH
Sequence: MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGNLPIEAALSKFLSDVVPDRVSVDYRVFEIDDSSLGVYYSDEKDDGDAIADKATPKIIELETPELDFEMENKLLCTSEDHLQCFSEVLEIKNDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRKIQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILEISNAEEFQGKVAVPVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDDAFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYPFEEIVTFNIDYNWEASEGDKWVYDFIFSEDAFCEPLVEKCTEPFYGISNLDEHAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNLESRVEAAKTTNHKCMSIDSKASCRSGGMHPNPKTEEMILHSVRPSENIQALVGEFVKSYLTLVKDESENLSEDKLKLLSISKGKLIDCIRKANVHKTQLADDKTFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDITRSHPSLAVIQGILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYSFPSKLDSFPSFHFIKVELDMPSACGQLCAGVTVPYSLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAGSSETTNESEFISMPQESERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTYQKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEIILKCIKSSVKLSKLHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGSKKKQYIAEKDEIDMDDLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIFHFDPVTEFSDAPFKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEKDQPDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEVIDRADKYLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADIDSSSERYATEKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRSAVPTTELPFREEISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNIKKANTKRKSPSILEFFKYKGGNKLQEEKRQKRSKNSSASPKNERFYSPLKSCTPIDKRAKQSLSYTANGTGQTKLVWK
What is the function of this protein?
Essential for the formation of class I meiotic crossovers.
What are the official names of this protein?
Protein SHORTAGE IN CHIASMATA 1.
What is the protein family that this protein belongs to?
Belongs to the XPF family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PSBL_PROM2
Sequence: MQVNENPNKVPVELNRTSLYLGLLSVFVLGILFSSYFFN
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
What are the official names of this protein?
Photosystem II reaction center protein L, PSII-L.
What is the protein family that this protein belongs to?
Belongs to the PsbL family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Single-pass membrane protein.
Protein: LKHA4_DICDI
Sequence: MDPSSLSNPQECKVTSLNLVLSVNFEKSQLQGYVEVASQIVKEGTESLILDTNQLEISHCNDVTSNPINFKLSEEHKVFGKALIISIPEGLRSVGKEFIVRVYYNTTVDSNALQWLTKDQTAGKLHPYLFSQCQAIHARSLVPCQDSPSNKVKYQAEITVPKPLTALMSALSTGKTESTDSSVFTFTQEIPIPTYLIAIVVGDLESRVIGPRSKVWSEPSMVAAAEYEFANTEKFIAVGEDLLTPYVWGRYDILLLPPSFPYGGMENPLLTFVTPTLLAGDRSLEGVVAHEIAHSWCGNLVTNKYWSEFFLNEGFTVFVERKILGRLYGEEMFDFEAMNGLKHLHDDVDLFTHKHQEELTALIPNLNGIDPDDAFSSVPYEKGFNLLCYLQSLVGVADFEAWLKSYISKFSYQSIVATQMKDYFIEYFTEKGKSEQISVVNWNDWFNKPGMPIEQVVFVSPAAKVAKDLAEITWIKDQGVNATKDDIKSFKTQQIILFLDTLIHSTSEKPLSVDVLEKMDSLYGFTDVVNSEYKFRWQTLCLHSGLKRIEPKVVEFLISQGRMKFVRPLYRELNKVNPELAKSTFNKYKSQYHIIASKMVAKDLGL
What is the function of this protein?
Aminopeptidase that preferentially cleaves di- and tripeptides.  Also has low epoxide hydrolase activity (in vitro).  Can hydrolyze the epoxide leukotriene LTA(4) but it forms preferentially 5,6-dihydroxy-7,9,11,14-eicosatetraenoic acid rather than the cytokine leukotriene B(4) as the product compared to the homologous mammalian enzyme (in vitro).
What are the official names of this protein?
Leucine aminopeptidase, Epoxide hydrolase, Leukotriene A-4 hydrolase homolog, LTA-4 hydrolase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYD_GEOKA
Sequence: MERTYYCGEVPETAVGERVVLKGWVQKRRDLGGLIFIDLRDRTGIVQVVASPDVSAEALAAAERVRSEYVLSVEGTVVARAPETVNPNIATGSIEIQAERIEIINEAKTPPFSISDDTDAAEDVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLVPSRVHPGEFYALPQSPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQPEFTQIDIEMSFIEQKDIMDLTERMMAAVVKAAKGIDIPRPFPRITYDEAMSRYGSDKPDIRFGLELVDVSEIVRNSAFQVFARAVKEGGQVKAINAKGAAPRYSRKDIDALGEFAGRYGAKGLAWLKAEGEELKGPIAKFFTDEEQAALRRALAVEDGDLLLFVADEKAIVAAALGALRLKLGKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAHHPFTMPVRDDIPLLETNPSAVRAQAYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEEEARRQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLLTEAPGPVSDKQLEELHLAVVLPENE
What is the function of this protein?
Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).
What are the official names of this protein?
Aspartate--tRNA ligase, Aspartyl-tRNA synthetase, AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KTHY_ABVP
Sequence: MIYILEGLDGTGKTSFASELIKSQVFSRPMYVYFSKEDSYENTKLAWVSLIKELSKLNFNIIMDRSIISTIAYHFTYRPSKEYENFIRSELESVLNLDPSKAVFIHFVKVHDSKKLLEYANRVKSIRDNYHLLMRILREKGFNVIVNGGQKDFNLF
What is the function of this protein?
Catalyzes the conversion of dTMP to dTDP.
What are the official names of this protein?
Putative thymidylate kinase, dTMP kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate kinase family.
Protein: BIOA_STAA8
Sequence: MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNVHGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASVEIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENIQVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFLKEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLTSKKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQLHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRNCKENGLMIRNLENVITFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC
What is the function of this protein?
Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA).  It is the only aminotransferase known to utilize SAM as an amino donor.
What are the official names of this protein?
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, 7,8-diamino-pelargonic acid aminotransferase, DAPA AT, DAPA aminotransferase, 7,8-diaminononanoate synthase, DANS, Diaminopelargonic acid synthase.
What is the protein family that this protein belongs to?
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SCX1_TITFA
Sequence: KEGYLMDHEGCKLSCFIRPSGYCGRECAIKKGSSGYCAWPACYCYGLPNWVKVWERATNRCGKK
What is the function of this protein?
Beta toxins bind voltage-independently at site-4 of sodium channels (Nav) and shift the voltage of activation toward more negative potentials thereby affecting sodium channel activation and promoting spontaneous and repetitive firing.
What are the official names of this protein?
Beta-toxin Tf1.
What is the protein family that this protein belongs to?
Belongs to the long (4 C-C) scorpion toxin superfamily. Sodium channel inhibitor family. Beta subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: LEU3_MYCTO
Sequence: MKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPSGVLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGTPNEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLSHLGEHDAAARVDRAVEAHLATRGSERLATSDVGERIAAAL
What is the function of this protein?
Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate.  The product decarboxylates to 4-methyl-2 oxopentanoate (By similarity).
What are the official names of this protein?
3-isopropylmalate dehydrogenase, 3-IPM-DH, Beta-IPM dehydrogenase, IMDH.
What is the protein family that this protein belongs to?
Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS7_METS4
Sequence: MSRRHSAEKREIIPDPKYGDVVLTKFMNSVMYEGKKSVAESIVYGAFDIIESRARANPIEVFRAALDNVAPAIEVRSRRVGGATYQVPVEVRHERRQALAIRWLIQAARSRNDRTMVERLSAELLDAANNRGAAVKKREDTHRMAEANRAFSHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: Y1629_PYRAE
Sequence: MINVLAVAGLPGSGKTTVARIIERRGYLYYSLGDVVRAEAERRGLTPDKTAVTMRLERGRKAVIYELLKSVKPGEKVVIDGIRSIEEVEALEEFLGTVFLIYVVASRKVRYQRLTGRGRSDDPLSFSQFLLRDLRELRFGLADLLSRADYIIVNETKSIEELEQEIGKVLLELR
What are the official names of this protein?
UPF0200 protein PAE1629.
What is the protein family that this protein belongs to?
Belongs to the UPF0200 family.
Protein: SYS_GEODF
Sequence: MLDVRYIRENLELVETRLKTRGTGIDLERFRQLDSQRRELLQQTETLKALRNKVSEEISRVKDKSQAQDRIAEMREVSQRVKGLDEELKGVEEALEYFLLTVPNIPSSATPVGASEADNVEIRVWGEKPHLDFTPKPHWEIGEDLDILDFERGAKLTGARFTLYKGLGARLERALVNFMLDLHTGRHNYLEMLPPFMVNRESMTGTGQLPKFEDDLFHLGEVDYFLIPTAEVPVTNIHRGEILKGSELPLCYTAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFVHPGHSYAELDKLLDNAEEVLRLLKLPYRVVELCTGDIGFSAARTFDIEVWLPGQDCYREISSCSNFEDFQARRASIRFREDEKAKPEFVHTLNGSGLAVGRTVVAILENYQQQDGSVVIPEALRPYMGGAEKIG
What is the function of this protein?
Catalyzes the attachment of serine to tRNA(Ser).  Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).
What are the official names of this protein?
Serine--tRNA ligase, Seryl-tRNA synthetase, SerRS, Seryl-tRNA(Ser/Sec) synthetase.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: URED_ACIBS
Sequence: MNRIQQTFQTSSAPFWYAQLELGFCYENSRTIMSHRKHYGPVRVQKMLWPEKTGVCHAIIVHPPAGIAGGDHLTFQIETERQAHAVITTPGAGKWYRTNGKQAFQHIYLNVKDDSILEWMPQETMLFDGALAHSETDIHLEQTASFIGWDMLVLGRQARAENFVQGGYHNQFKLWRKNKLLVADTLYFEGGDRWLSSCLGMNNQAVMASFWAVPPEKFRSSFYLEQHIELIRELIMRMDVPVTLTLLEDVLCARFLGNDVRRCHDAFAAIRAKLRRYWFDLDEEFPRIWKT
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreD.
What is the protein family that this protein belongs to?
Belongs to the UreD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CYSD_COLP3
Sequence: MNLTHLKTLEAESIHIFREVAAEFDNPVMLYSVGKDSAVLLHLARKAFAPGKIPFPLLHVDTNWKFKEMIAFRDQMAKDYDFELLVHKNPEGIEMGMGPFTHGSATHTDVMKTQGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDENHRWDPKSQRPELWNIYNGKVNKGESIRVFPLSNWTELDIWQYIYLESIPIVPLYLAEKRPVVERDGTLIMVDDDRMPIGEDEEVQMKSVRFRTLGCYPLTGAVESTANTLPEIIQEMLLTKTSERQGRVIDHDSAGSMEKKKMEGYF
What is the function of this protein?
With CysN forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway.  APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.
What are the official names of this protein?
Sulfate adenylyltransferase subunit 2, ATP-sulfurylase small subunit, Sulfate adenylate transferase, SAT.
What is the protein family that this protein belongs to?
Belongs to the PAPS reductase family. CysD subfamily.
Protein: RAPZ_SALA4
Sequence: MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADRQISAAVSIDVRNMPESPEIFEQAMNNLPGAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKT
What is the function of this protein?
Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ.  When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E.  Consequently, GlmZ is inactivated and unable to activate GlmS synthesis.  Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS.
What are the official names of this protein?
RNase adapter protein RapZ.
What is the protein family that this protein belongs to?
Belongs to the RapZ-like family. RapZ subfamily.
Protein: PLI2A_ARATH
Sequence: MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSASSGGASPPSDDHKPDDTASIPEAKEDDAAPEAAGEEEPEPVVES
What is the function of this protein?
Binds to actin filaments and promotes cross-linking into thick bundles.  Has an actin-stabilizing activity.  The actin regulatory activities are inhibited by pH > 6. 8 but are [Ca(2+)] independent.
What are the official names of this protein?
LIM domain-containing protein PLIM2a, Pollen-expressed LIM protein 2, AtPLIM2.
Protein: TRBF_RHIRD
Sequence: MAGTTPPDNPYIAARNEWNERYGSYVKAAAAWRIVGITGMTMAVIGFGYALYQSTQVKLIPYIVEVDKLGTAVNAGFPQQIEYADPRVVRATLGSFVSNFRSVTPDAVVQKQYIDRTYGLLRTSDPATEKVNAWFRSNSPFEKAKTATVAIEVNNIVALSNQSYQVDWTEFERDRRGKETATRRFRGIATVTLTPPQDEGVIRLNPIGLYLRDFDWTAQL
What are the official names of this protein?
Conjugal transfer protein TrbF.
What is the protein family that this protein belongs to?
Belongs to the TrbF family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass membrane protein.
Protein: CARM1_XENLA
Sequence: MAAVSVFPGVRLLSIGDANGEIQRHAEQRELRLEARAGDIALYNAENVCVFKCTITRDTECSRVGKQSFIVTLGCNSVLVQFATPADFCSFYNIIKSCRCPATERSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKVVLDVGCGSGILSFFAVQAGARKVYAVEASSMAQHAELLVKSNNLTDRVVVIPGKVEEISLPEQVDMIISEPMGYMLFNERMLESYLHAKKFLKPNGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFKQPIVDTFDIRILMAKSVKYTVNFLDAKETDLHRIEIPFSFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLLQSPIFTKAGDTLSGTVLLIANKKQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGSAPSPPPGSHYSSPSENMWNTGGAYTMNTGMGMGGMPTAYDLSSVIGGSSGISHSNLIPLGEPPAVSCPPAPLHSEPQDLTLGTSTNTGIVNHTHSRMGSIMSTGIVQGSAGGQAASNSSSHYPVNNQFTMGGPAISMASPMSITTNTMHYGS
What is the function of this protein?
Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, pre-mRNA splicing, and mRNA stability.  Recruited to promoters upon gene activation together with histone acetyltransferases from EP300/P300 and p160 families, methylates histone H3 at 'Arg-17' (H3R17me) and activates transcription via chromatin remodeling.
What are the official names of this protein?
Histone-arginine methyltransferase CARM1, Coactivator-associated arginine methyltransferase 1, Protein arginine N-methyltransferase 4.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm.
Protein: Y2722_NITMU
Sequence: MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQNMPKENVERAIKRGSGDLEGVNYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAEDIIAHDDGSIEVITAPYEFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID
What are the official names of this protein?
Probable transcriptional regulatory protein Nmul_A2722.
What is the protein family that this protein belongs to?
Belongs to the TACO1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS14_ALTMD
Sequence: MAKESMKAREAKRTKLVAKYAEKRAALKAIISDVNVSEEERWDAVLKLQQLPRDSSSSRQRNRCRVTGRPHGYLRKFGLSRIKLREAAMRGEVPGLKKASW
What is the function of this protein?
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
What are the official names of this protein?
30S ribosomal protein S14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS14 family.
Protein: HEMH_CUPNH
Sequence: MTFSPEPAYQHGHAPRTAILLVNLGTPDAPTPKAVGRYLKEFLSDPRVVEIPRAAWLPLLHGVILPLRSRASALKYESIWLREAHMTGSPLLVYSERQAHALQRLMNQHGHEVTVACAMRYGNPSIASVLEALRRQGCEQVLVLPMYPQYSGTTTATAFDEVFRVLGQWRNQPELRLVKHFHDHPAYISALHQQVGAYWARHGMPDFARGDKLILSFHGVPRRTLELGDPYHCECLKTGRLLGEALGLQPGQYQVTFQSRFGKAEWLQPYTAPTLAELGKVGAGRVDVFCPGFPADCIETLEEIAMEGQTEFKVAGGKDFHFIPCLNDADPWVAAMAEIALQHLQGWPLATPHPHELEARRTRAQTRGAAA
What is the function of this protein?
Catalyzes the ferrous insertion into protoporphyrin IX.
What are the official names of this protein?
Ferrochelatase, Heme synthase, Protoheme ferro-lyase.
What is the protein family that this protein belongs to?
Belongs to the ferrochelatase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AMPP3_BLAGS
Sequence: MDASVDKILAGKYPAKHHAKRVAARIRELGHGEAGVIYLESQKTRMIEDNDGEMPFRQRRNFFYLSGCPLPDSYLTYNIEEDHLTLFIPPIDEDSVIWSGLPLSPDEALELYDVDAVLSTADVNASLAHYCSAKEGTKVFAISDQVSPHITFLPFQETDFDVLKRAAEEARVVKDDYEIALLRRANEISSKAHVAVIKAAKSAMNERELEATFIATCMSYGCREQSYHPIFAGGTNGATLHYQKNDQDLVDKTTGEKKLNMLVDAGGEYRNYCADITRVFPLSGKFSAESRQIYDIVLEMQMTSLAMIKAGVMWEDVHSNSHRVAIRGLLKLGILRGTEQELFDKGISVAFFPHGLGHYLGMDTHDTGGNPNYEDKDSKFKYLRLRGVLACGGVVTVEPGLYFCRFIIDPYLASPELGKYIDANVLEKYWSVGGVRLEDNVVVTQNGYDNLTTAPKIPEEIEKLAAGP
What is the function of this protein?
Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides.
What are the official names of this protein?
Probable Xaa-Pro aminopeptidase PEPP, Aminoacylproline aminopeptidase, Prolidase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M24B family.
Protein: RK20_ACOGR
Sequence: MTRVRRGYIARRRRTKIRLFAATFRGAHSRLTRAATQQKMRALVSAHRDRGKQKRDFRRLWITRINAVTRENGVCYSYSRLMHNLYKRQLLLNRXILAQLAILNKNCLHIISNEIIK
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: DHH1_BOTFB
Sequence: MADELATKLAATQINDNASPDNWKAGLNIPAKDTRQQTEDVTATKGLEFEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLGINVMVTTGGTTLRDDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLLSPEFTIVIEQLLQFHPKDRQIMLFSATFPMTVKDFSDKNMADPYEINLMDELTLRGITQFYAFVEEKEKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLYNIERELGTEIAPIPQIIPKNLYVYETPENIPRPVSNFQTNTRQASGPGRDQQQPTQHSGNQRTGGQYNNYNNGRQSGPGQNQSQGQGQVQGQGPRQNQGQRQNYSRGRGGFGGGRGGGQGPRQNGYDNSRGGRGQGPPPAQ
What is the function of this protein?
ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping by activating the decapping enzyme DCP1.  Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs.  May also have a role in translation and mRNA nuclear export (By similarity).
What are the official names of this protein?
ATP-dependent RNA helicase dhh1.
What is the protein family that this protein belongs to?
Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm, P-body. Note=Is concentrated in several cytoplasmic foci called P bodies (or cytoplasmic processing bodies) which represent sites of mRNA decapping and 5' to 3' exonucleotidic decay.