PharMolix/UniProtQA huggingface dataset:
Protein: NIFH_ZYMMO
Sequence: MSKIRQIAFYGKGGIGKSTTSQNTLAALVELGQKILIVGCDPKADSTRLILNSKAQDTVLSLAAEAGSVEDLELEDVLKLGYKDIKCVESGGPEPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAGTGGVRLGGLICNERQTDREYELAEALAKRLNSKLIHFVPRNNIVQHAELRKQTVLQYAPDSDQANEYRELARKIHENSGKGTIPTPITMEELEEMLLEFGIMKTEEQELAELAAKESAVAK
What is the function of this protein?
The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
What are the official names of this protein?
Nitrogenase iron protein, Nitrogenase Fe protein, Nitrogenase component II, Nitrogenase reductase.
What is the protein family that this protein belongs to?
Belongs to the NifH/BchL/ChlL family.
Protein: BTUC_ECODH
Sequence: MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFTPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKAGR
What is the function of this protein?
Part of the ABC transporter complex BtuCDF involved in vitamin B12 import.  Involved in the translocation of the substrate across the membrane.
What are the official names of this protein?
Vitamin B12 import system permease protein BtuC.
What is the protein family that this protein belongs to?
Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: NDK_NOSS1
Sequence: MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE
What is the function of this protein?
Major role in the synthesis of nucleoside triphosphates other than ATP.  The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
What are the official names of this protein?
Nucleoside diphosphate kinase, NDK, NDP kinase, Nucleoside-2-P kinase.
What is the protein family that this protein belongs to?
Belongs to the NDK family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: 3L221_NAJAN
Sequence: IRCFITPRVSSQACPDGHVCYTKTWCDNFCGINGKRVDLGCAATCPTVKPGVDIKCCSTDNCNPFPTRKRP
What is the function of this protein?
Binds with high affinity to muscular (alpha-1/CHRNA1) and neuronal (alpha-7/CHRNA7) nicotinic acetylcholine receptor (nAChR) and hinders acetylcholine binding to the receptor, thereby impairing neuromuscular and neuronal transmission.
What are the official names of this protein?
Long neurotoxin 1, NXL1.
What is the protein family that this protein belongs to?
Belongs to the snake three-finger toxin family. Long-chain subfamily. Type II alpha-neurotoxin sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: CYB_EROSE
Sequence: MTNIRKTHPLLKIVNSSFVDLPAPSSLSSWWNFGSLLGVCLAVQILTGLFLAMHYTSDTATAFNSVAHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYLFTETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVTALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLIMLTALSTLVLFSPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVVPLLHTSKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEHPYVIIGQVASVLYFLILLIFMPLISILENYLLKW
What is the function of this protein?
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain.  The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c.  Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
What are the official names of this protein?
Cytochrome b, Complex III subunit 3, Complex III subunit III, Cytochrome b-c1 complex subunit 3, Ubiquinol-cytochrome-c reductase complex cytochrome b subunit.
What is the protein family that this protein belongs to?
Belongs to the cytochrome b family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: EXOC8_CHICK
Sequence: MALALGEGGGGSRLRRQLESGGFAAAEYVKQLSQQSDGDRDLQEHRQRIQALQEETAQSLKRNVYQNYRQFIETAREISYLESEMYQLSHILTEQKGIMEAVTQALLLQADRDDPALGARRAAAADPFLPLSAKEAAASEEGRQRTLTTLLEKVEGCRDLLPESPGKYLVYNGDLLEYDADHMAQIQRVHAFLMNDCLLVATALPNRRGAYRYDALYPLEGLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKKEWLEVLEETKRNRALSEKRRLEQEALPRPAPTPPESTNPFEEEEEEEEEPSAEEEAVDLSLEWIQELPEDLDVCIAQRDFEGAVDLLDKLNEYLADKPVSQPVKELRAKVDERVRQLTDVLVFELSPDRSLRGGPRATRRAVSQLIRLGQSTKACELFLKNRAAAVHTAIRQLRIEGATLLYIHKLCHVFFTSLLETAREFETDFAGNNGCYSAFVVWARSSMRMFVDAFSKQVFDSKESLSTAAECVKVAKEHCKQLSDIGLDLTFIIHALLVKDIKGALQSYKDIIIEATKHRNSEEMWRRMNLMTPEALGKLREEMKSCGVGSFDQYTGDDCWVNLSYTVVAFTKQTMAFLEEALKLYFPELHMVLLESLVEIILVAVQHVDYSLRCEQDPEKKAFIRQNASFLYETVLPVVEKRFEEGVGKPAKQLQDLRNASRLMRINPESTTSVV
What is the function of this protein?
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
What are the official names of this protein?
Exocyst complex component 8.
What is the protein family that this protein belongs to?
Belongs to the EXO84 family.
What are the subcellular locations of this protein?
Cytoplasm. Cytoplasm, perinuclear region. Cell projection, growth cone. Cell projection.
Protein: RL22_LISW6
Sequence: MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYTPRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAINKRTSHITVVVSEVKEG
What is the function of this protein?
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L22.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: Y5349_VIBC1
Sequence: MKVELTAIEARVIGCLIEKEVTTPDQYPLSLNALTNACNQKSNREPVMSLSEADVLYAVDALIERRLVSDESGFNSRVSKYQHRFCNTEFGDLKLTKQEKGIVCCMLLRGAQTPGEIRTRTNRLATFNDVKEVENVLEHLANDEKGPLVVKLPREAGKRESRYMHLFCGEVDVSELAVATTAPSSAGSERITQLEQEVAELREELAALKEQVESLFS
What are the official names of this protein?
UPF0502 protein VIBHAR_05349.
What is the protein family that this protein belongs to?
Belongs to the UPF0502 family.
Protein: MSH3_NEUCR
Sequence: MAGPSRLPDKKQASISSFFTPRNTSPLVNLSQNASKKPPPAESKSSKSTSSRKRPEPQTDDSEDDVPRDAKRRRSNGPSAATDTEDAVASLKLSSSSRTERYALNSSRPSQDEQEKEEDVAERKKKEELHRKFVKKLGHPDSMFSYRQRDTESAAVEGEGEEGEDDEEEPAPKTTAKKKGAKTGKLTPMELQFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAHLDRFASASIPVHRLPVHAKRLVAAGYKVGVVRQIETAALKKAGDNRNAPFVRKLTNVYTKGTYIDETGELDQPGETTGASSGGYLLCLTETPAKGMGTDEKVNVGIIAVQPATGDIIYDEFEDGFMRREIETRLLHISPCEFLIVGDLSKATDKLIQHLSGSSTNVFGDKSRVERVPKSKTMAAESYSNVTDFYAGKAKDSDERSAALLNKVLKLPEAVMICLSAMITHLTEYGLQHIFDLTKYFQSFSTRQHMLINGTTLESLEVYRNATDHSEKGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEELLNNQSTAKVDKLVNMLKSIKADLERSLIRIYYGKCTRPELLSTLQTLQKISFEYARVKSPADTGFSSTLLTSAIMTLPSISPMVTAHLSKINAEAARKDDKYAFFLEQHETEDISEHKLGIAAVEQDLDEHRSEAAKDLGKKVPVNYVTVAGIEYLIEVPNTDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFSDLLSQIAGEYQPLRDAVSSLSTLDCLLSLSTVAALPGYTKPTFLPSSHPSFLSITEGRHPIAEHLLPNGYIPFTMSLGTLSSSASSPDPNPTSPSGKPALAQLITGPNMGGKSSYTRAVALLVLLAQIGSFVPATSMSLTLSDAIFTRMGARDNLFKGESTFMVEVSETAAILRQATPRSLVVLDELGRGTSTHDGRAIAGAVLEYVVRDVGCLMLFVTHYQDLAGVAEGLTVGEGEEKRRGVECVHMRFASNKSRTSMDDDAMEVDGDGDGQEGAGADKDEEEEITFLYDLAPGVAHRSYGLNVARLARIPRKVLEVAARKSSELEKEVRAKRIKGAMGLVGGVLYGGGAPGDQEEKLEQLVGLVEQL
What is the function of this protein?
Component of the post-replicative DNA mismatch repair system (MMR).  Heterodimerizes with msh-2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair.  Msh-3 provides substrate-binding and substrate specificity to the complex.  When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs.  Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication.  After mismatch binding, forms a ternary complex with the MutL alpha heterodimer, which is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis.  ATP binding and hydrolysis play a pivotal role in mismatch repair functions (By similarity).
What are the official names of this protein?
DNA mismatch repair protein msh-3, MutS protein homolog 3.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutS family. MSH3 subfamily.
What are the subcellular locations of this protein?
Nucleus.
Protein: YFCN_ECOL5
Sequence: MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVDEWLPPELP
What are the official names of this protein?
UPF0115 protein YfcN.
What is the protein family that this protein belongs to?
Belongs to the UPF0115 family.
Protein: CSRA_GEOTN
Sequence: MLVLTRKLKEAIQIGDDIEITVLAIQGDQVKLGINAPKHVEIHRKEIYLAIQAENNAASHASKSSLKRLNEQLKHLKGGKQA
What is the function of this protein?
A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability.  Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation.  Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
What are the official names of this protein?
Translational regulator CsrA.
What is the protein family that this protein belongs to?
Belongs to the CsrA/RsmA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ILVC_CLOAB
Sequence: MEELKVYYDEDADLNYLKDKKIAIIGFGSQGHAHALNLKESGLNVIVGLYDGSKSWKVAEDYGFEVYEVADAVKQAQVVMILLPDEKQKQIYEASIKDNLDEGDALFFAHGFNIHYNQIVPPKNVDVLMIAPKGPGHIVRRQYTEGGGVPCLYAVHQDYTGKGKEIALAYGKGIGGTKGGVMNTTFKIETETDLFGEQAVLCGGICALINAGYDTLREAGYSAENAYFECFHEMKMIVDLMYEGGMAKMRYSISDTAEYGDYVVGNRLINDNVRAEMKKVLTEIQDGTFAKNWLLENQTGRPAFNARRRIEADREIEKVGKRLRGMMSWINENPSNE
What is the function of this protein?
Involved in the biosynthesis of branched-chain amino acids (BCAA).  Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate.  In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB).  In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
What are the official names of this protein?
Ketol-acid reductoisomerase (NADP(+)), KARI, Acetohydroxy-acid isomeroreductase, AHIR, Alpha-keto-beta-hydroxylacyl reductoisomerase, Ketol-acid reductoisomerase type 1, Ketol-acid reductoisomerase type I.
What is the protein family that this protein belongs to?
Belongs to the ketol-acid reductoisomerase family.
Protein: FUJ5_GIBF5
Sequence: MSHRQSCDRCRQQKVRCLRDESQGGAGNKARASFSRCERCTKASVDCVYSLKSRSNRPNAHQPIHNQVDADPQTLVGPSWFGQGLFCQAASGSLGPDYDDLAGQFADLDGAEFNGWDGNLDVIPSLSMSSLNTLAAPAAMVSQDISPTKDHHDNNHMQEPEADDDDESNNGHDQDAIQELSLQLTAISQRATRAKRRLHRAGCPPPTVSSPEVNEAFEDTNNLLRIANNITNACAHLCDEASSNSITLDYGLVFSALASHQHLLALFKAICHLIQRYLESMTSANQHRQQQQQRLHDGDIGPSSVAQFVMVLQLLTYLINRMDRNLAQVNGPHGHGLETSLGGQATPITPSTGYQDIVQSMLIHRGDKNNTTGSSQSLPIIGQVVLGAIPDEHKRLRQVIQELQTRIERSEIQ
What is the function of this protein?
Transcription factor that regulates the expression of the gene cluster that mediates the biosynthesis of fujikurins (PubMed:23825955, PubMed:26192387).
What are the official names of this protein?
Fujikurins biosynthesis cluster transcription factor FFUJ_12243.
What are the subcellular locations of this protein?
Nucleus.
Protein: RSXC_ECO45
Sequence: MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIPRDGWADYRSRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSHDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEEQIDPRKAAVEAAIARAKARKLEQQQANAEPEEQIDPRKAAVEAAIARAKARKLEQQQANAEPEEQIDPRKAAVEAAIARAKARKLEQQQANAEPEEQIDPRKAAVAAAIARVQAKKAAQQKVVNED
What is the function of this protein?
Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.  Required to maintain the reduced state of SoxR.
What are the official names of this protein?
Ion-translocating oxidoreductase complex subunit C, Rsx electron transport complex subunit C.
What is the protein family that this protein belongs to?
Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: SYAP_ORYSI
Sequence: MEAAALLSPTATSRSPLPLLSTAPAAHRLHVLLPLSGRRRRLCLRSSPRPRGSLGCAGDCVVRSMGSSRERGVLVKTSSSSASVESATQEVGAASSGEWSGDAIRRRFLDFYAARGHKILPSSSLVPDDPTVFLTIAGMLQFKPIFLGKEPRRVPCATTSQKCIRTNDIENVGRTSRHQTFFEMLGNFSFGDYFKKEAITWAWELTTKEFGLPPERLWISVFQDDDEAFSIWHNEVGVPKERIKRLGEDDNFWTSGATGPCGPCSEIYYDFYPERGSSDADLGDDSRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGMGLERMARILQKVPNNYETDLIFPIIEKAASMALVSYTTADDAMKTNLKIIGDHMRAVVYLISDGVIPSNIGRGYVVRRLIRRVVRTGRLIGIRGDGHGNSEGAFLPSLAEVAISLSTEIDPDVESRRKSILGELQREELRFVQTLERGEKLLDELLDEALSSAGNNGGKPCLSGKDVFLLYDTYGFPVEITAEIAGERGVIVDMKGFDMEMENQRKQSQAAHNVVKLSVGNETEIVKSIPDTEFLGYDSLSATAVVKGLLVNGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFLYVYGEEDAKQKAVIEINDVQKSLGNIFVHKGTIKQGSVEVGKEIDAAVDAKLRQGAKAHHTATHLLQSALKSIIGSETSQAGSLVAFDRLRFDFNFHRPLSEEELMKIESLVNQWVSSATHLETKVMDLQDAKNAGAIAMFGEKYGEQVRVVEVPGVSMELCGGTHVSNTAEIRGFKIISEQGIASGVRRIEAVAGDAFVEYVCARDNYMRCLCSSLKVKAEDVNGRVETILEELRTTRNEVSSLRSKIAVLKAASLANKATTIDNTRVVVENMGDVDADGLKSAAEYLVDTLEDPAAVILGSSPGDGKVSLVAAFSPGVVKMGIQAGKFVGGIAKLCGGGGGGKPNFAQAGGRKPENLPGALEKARDEIVAAISSKSS
What is the function of this protein?
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala).  Also edits incorrectly charged tRNA(Ala) via its editing domain.
What are the official names of this protein?
Alanine--tRNA ligase, chloroplastic/mitochondrial, Alanyl-tRNA synthetase, AlaRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Plastid, chloroplast. Mitochondrion.
Protein: U5_BBTVA
Sequence: MIIYLMSYRICVKRTKGLWSIYMIVLTPSIEVRIHYTEYKQR
What are the official names of this protein?
Uncharacterized 5 kDa protein in M-Rep ORF, Uncharacterized protein U5.
Protein: PYRH_METAC
Sequence: MLIVLSLGGSILAKNLDSDRFLKYANVLRDISKKHTLLVITGGGEAARNYIGAARAMGADEVTCDYIGIDITRLNARLLIAALGPDGYPEIPTNYLEASKAINSGKVVVMGGVTPGQTTDAVAAILAEYLRADLLTIATSIDGVYSSDPNCDPSAVKYDKISPEKLINIVMAIEMKAGSKSPVDPVAAKIIERCKLDALVMDARDPSLLGEILGEEVAKKSPVSCGTWITARK
What is the function of this protein?
Catalyzes the reversible phosphorylation of UMP to UDP.
What are the official names of this protein?
Uridylate kinase, UK, Uridine monophosphate kinase, UMP kinase, UMPK.
What is the protein family that this protein belongs to?
Belongs to the UMP kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS8_GEOMG
Sequence: MSMTDPIADMLTRIRNASMAKLQKVDIPSSNLKVSLANVLKAEGFIKNFKVIADNKQGVLRVYLRFIDEKEPVIREIKRVSKPGSRVYVGSDEIPSVKSGMGVAILSTSKGILTDKVAREAGVGGEVICTVW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.
Protein: RK33_PINTH
Sequence: MAKSGDIRVTITLECTSCTQDSVYKRFPGISRYTTRKNRRNTPIRLESNKFCPYCYKHTIHGEIKKRD
What are the official names of this protein?
50S ribosomal protein L33, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: LPOB_HAMD5
Sequence: MKKYLLSASIVFLLASCAQPPAKIGRPSKSEPSTVSTDSPEGISSESAEIGIVPLTPKIKSFDWSVPMKPLVENMSQTKDLPNGSVLLVDTVKNNTNGLLQIEKATESLLHILSSNNTFFLISANQLAKAKTALGISKQDNLSSRSKAIALGRYLKAEYVLYTDVSDDIQSPVINMELMLVKTGEIIWADKTAMTLAP
What is the function of this protein?
Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b).
What are the official names of this protein?
Penicillin-binding protein activator LpoB, PBP activator LpoB.
What is the protein family that this protein belongs to?
Belongs to the LpoB family.
What are the subcellular locations of this protein?
Cell outer membrane; Lipid-anchor; Periplasmic side.
Protein: RL9_STRGG
Sequence: MKIILTHEVSGLGTAGDVVDVKDGYARNYLVPRGFAIRWTKGGEKDVAQIRRARKIHEIATIEQANEIKAKLEGVKVRLAVRSGDAGRLFGSVTPADVAAAIKAAGGPDVDKRRVELGSPIKTLGGHQVSVRLHPEVAAKLGVEVVAA
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: RL13_BACVZ
Sequence: MRTTPMANASTIERKWLVVDAAGKTLGRLSTEVASILRGKHKPTYTPHVDTGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEKMLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYELRG
What is the function of this protein?
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself.  It is important during the early stages of 50S assembly.
What are the official names of this protein?
50S ribosomal protein L13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL13 family.
Protein: CH602_CHRVO
Sequence: MAAKDVKFGDSARSKMVAGVNILADAVKVTLGPKGRNVVLDRSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIVQEGMKFVAAGMNPMDLKRGIDKAVVSLVGEIAKIAKPCATSKEIAQVGSISANSDSDIGEIIANAMEKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNQDKQIAALDNPFILLFDKKISNIRDLLPVLEQVAKSGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLTDIAVLTGGEVIAEEVGLTLEKATLDQLGQAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALLRARATLENLKTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNAASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMGGMGGMM
What is the function of this protein?
Together with its co-chaperonin GroES, plays an essential role in assisting protein folding.  The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.
What are the official names of this protein?
Chaperonin GroEL 2, 60 kDa chaperonin 2, Chaperonin-60 2, Cpn60 2.
What is the protein family that this protein belongs to?
Belongs to the chaperonin (HSP60) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CAS2_DESAP
Sequence: MKTLVSYDIVEDKVRRKVFEACKDYGLTNVQYSLFFGDMTHNRREELFQRLRRIIGRQEGKVLICPVCDKDLRLSKAIEVSAGMPEEAAEAAVSYPGRSRKKARAG
What is the function of this protein?
CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids).  CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids.  CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).  Functions as a ssRNA-specific endoribonuclease.  Involved in the integration of spacer DNA into the CRISPR cassette.
What are the official names of this protein?
CRISPR-associated endoribonuclease Cas2.
What is the protein family that this protein belongs to?
Belongs to the CRISPR-associated endoribonuclease Cas2 protein family.
Protein: Y049_PYRAE
Sequence: MRPLPSQLPIPLSPEGYGRFAVEFYKRVAVGILGENLVLSPYSVYKAFAMAYAGASGATREELKAVFGFGEDPCVLPAASRGVEEALSAWLQTDFPFKPNYLNKLRCIGAEAKYVDFERDYKSAIAAINKWAEEKTRGLIKDLVPADYPEGWDVRAVLVSALYFKGNWWPDRFQRVGKREFKGAGPADFIALDLSSCGDPSLRGRASSDLTVVELPFNNTEVALYIIMPRDLPSFVKELTYEKLREIISTLPDQVIRVEMPLFKAEFKGSVKQALREMGVVRAFETADFTEMAYRRLYIDDVFHGAYLNADENGVVAAAATAVVFKPVCAKGGGVEVVVDKPFLFVLADRTSGVIYFIGHVVNPSPGFTPT
What are the official names of this protein?
Uncharacterized serpin-like protein PAE0049.
What is the protein family that this protein belongs to?
Belongs to the serpin family.
Protein: ARLY_METKA
Sequence: MALGRPSYRGGRVSGGRDPDFAELSSSLEQDREIFHCDVWNSVVHAVSLWEAGRIDRSTAAGIVEGLVTVLEEGPDRLPEDAEDVHEAIESRLHEVVGEEAGWLQLGRSRNDQVATSVRMRLRERALDLSRELVGLGRALLDLAREHAEVPIAGYTHLKRAQPCTIGFWMSTYAAAVARSARGLLRVPGMDECPLGCSAFPGSTVPVDRHREAALLGFRKPARHCGEATALRGPILEFLGRLATAASELTRLAGDLIQLCSDELGVVEPPDELSSTSSVMPHKKNPDALELVRAELTVVAGLKGLGDAVHGKLPMFYNRDLQVLNGLLWDSVNRFELCVRVLRKVVEGLDVDEEAARGTVLGSHAAAVDLAELVAERAGLTFREAHKVVGRVSARLDREGVPMSPERADRVVEELEREGVKLRVEEVREVLSLKRTLRRPVEGSTDPGRLEVTLDRLRAELAAAERLEGTWRGRIERALRATEAAVNRLGVEGFAEVYRGYWDGEAPG
What are the official names of this protein?
Argininosuccinate lyase, ASAL, Arginosuccinase.
What is the protein family that this protein belongs to?
Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMH_STAS1
Sequence: MFHHVSVMLKETIDYLNIKEDGVYVDCTLGGAGHALYLLNQLGDEGRLIAIDQDTTAIENAKEVLKEHLHKVTFVHNNFRKITEILNDLNIEKVDGIYYDLGVSSPQLDVPERGFSYHHDAKLDMRMDQTQSLSAFEVVNEWEFEKLVRIFHRYGEEKFSKQIARRIEQNREQKPIETTLELVDVIKEGIPAKARRKGGHPAKRIFQAIRIAVNDELSAFEDSLEQAIDAVKMDGRISVITFHSLEDRLCKQMFQEYEKGPDVPRGLPVIPEAYTPKLKRVNRKPIIATDEDLEENNRARSAKLRVAEILK
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATPD_HISS2
Sequence: MSELTTIARPYAKAVFDFAVEQSEKDKSAVEKWTNMLEFLSELIRHDKVQSYLTSTSSTFKLADTVILICGEQLDQYGQNLVRLMAENKRLAVLPAVFNEFKSYVEEYKSLSQVEVVSAQQLNDVQQQKIITAMEKRLARKVILNCRIDSSLIAGAIIRTNDFVIDGSCRGQINRLANELRL
What is the function of this protein?
This protein is part of the stalk that links CF(0) to CF(1).  It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.
What are the official names of this protein?
ATP synthase subunit delta, ATP synthase F(1) sector subunit delta, F-type ATPase subunit delta, F-ATPase subunit delta.
What is the protein family that this protein belongs to?
Belongs to the ATPase delta chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.