PharMolix/UniProtQA huggingface dataset:
Protein: HGD_PSEAE
Sequence: MNLDSTALAYQSGFGNEFSSEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMARSEARRTWLYRITPSAKHPPFRRLERQIAGAELDAPTPNRLRWDPLALPEQPTDFLDGLLRMAANAPGDKPAGVSIYQYLANRSMERCFYDADGELLLVPQLGRLRLCTELGALQVEPLEIAVIPRGMKFRVELLDGEARGYIAENHGAPLRLPDLGPIGSNGLANPRDFLTPVARYEDSRQPLQLVQKYLGELWACELDHSPLDVVAWHGNNVPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVPGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIAADLKPHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFNPQRR
What is the function of this protein?
Involved in the catabolism of homogentisate (2,5-dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine.  Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
What are the official names of this protein?
Homogentisate 1,2-dioxygenase, HGDO, Homogentisate oxygenase, Homogentisic acid oxidase, Homogentisicase.
What is the protein family that this protein belongs to?
Belongs to the homogentisate dioxygenase family.
Protein: YOTJ_BACSU
Sequence: MCNRNVITIPYEEDMSKYSILHQVGGRIEYFQKEYSQYPMFAFDSEEDYNEYKCLIMQLKKNKKVSSFSF
What are the official names of this protein?
SPbeta prophage-derived uncharacterized protein YotJ.
Protein: RPOA_ACIB5
Sequence: MTRTANEFLTPQAIKVEAVSGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVEIEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDITAADLRLPHNVEVVNPEHLIGTLSATGSLKMRLKVSQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKRVSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQTPVAQEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit alpha, RNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase alpha chain family.
Protein: PSAL_PROMP
Sequence: MSDFQKSFSESTSSIKFDEKYIDNSVQPNDIGIANQWAVKPVSDPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFSMTGPLRNSDFALTAGLLATIGAVHILTGLLVLYNAPGKAPNVQPPDATVYNPPADLFTRTGWADFTSGFWLGGCGGAVFAWLLVGTLHLDTIMPIVKNIWTTG
What are the official names of this protein?
Photosystem I reaction center subunit XI, PSI subunit V, PSI-L.
What is the protein family that this protein belongs to?
Belongs to the PsaL family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Multi-pass membrane protein.
Protein: RAVA_ECOUT
Sequence: MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGALVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPASLQITDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC
What is the function of this protein?
Functions as an ATPase.  May play a role in metal insertion (metal-chelatase) or as a chaperone.
What are the official names of this protein?
ATPase RavA, Regulatory ATPase variant A.
What is the protein family that this protein belongs to?
Belongs to the RavA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NUOB1_NITOC
Sequence: MRWRLSKPQAATSIEQSKGSFEDAIRRNLLFAQLQDLVAWGRKNSLWPYNFGLSCCYVEMVTSFTSKYDIARFGAEVIRATPREADLMVISGTVFIKMAPVIKRLYEQMMEPRWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPDAFLEGLLLLQEAIGKEQRPLSWAIGPQGVERAPKPSLRDQRRAERQKATVFRSPDEV
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit B 1, NADH dehydrogenase I subunit B 1, NDH-1 subunit B 1.
What is the protein family that this protein belongs to?
Belongs to the complex I 20 kDa subunit family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: DABA_BURM1
Sequence: MSTATLEQRAKRGEAPRANDAGHCAHPADGARRGYPRERIDAACDAACRSIAPAWPLDRAIAVNPHWERIGRPVREIAARMAVLADIKVFPPREQIRSAWESARIAPADLRYALQALPAAQAAGMTERNCIDALARPLNLPRLPLLIDVLDDDPLRHERLSWRQAITHQVSQTCAAYFDEHQADWRPHHDQSLYAFWRDTISHDHGIGVLMGLPRLGQSLRALPATRQEAEAWVLERLGLPEAVWPDYLEAVLLTVNGWASWCAYLGWQARLAGESDEHLRDLLAIRLAWGVLLLDCKDDAAARRAFAAVQGHWRDSAALLADAQARLLVDEVWQLAFEAGYQRELAGKLGAVGQPQTIPEAATPAEEIEVQAAFCIDVRSEPLRRAVESIWPAVQTIGFAGFFGLPVAYTPLATSARRPQLPGLLAPSLEVTDAVSGPAGEGGGTMRAAASTARRTRFALSNQASAATRLPGTSFSFVEAAGLGYLGKLRQWLKPSRNPRVRDDLAGLPPRYKAVCRPALVGIDDQAKADLAARILHGMGIARSLAPLVVLVGHASQSANNAHAAALDCGACCGQSGEVNVRVLAQLLNDRATRAGLAQRGIDVPDDTTFVAALHNTTTDEIEGFDVDLLNPIAAARWAKLLSVFGHASDQVRRERAVRVGLDPRMEGGRLLASLRERANDGAQTRPEWGLAGNAAFVIGPRTRSHGAVLDGRCFLHDYDFTQDTDGSLLELLMTAPMLVAHWINWQYHASTCDPAHMGCGNKVLHNVVGGHIGVFEGNSGDLRIGLSKQSLHDGQRWMHEPLRLTVIIDAPGASIERVIDRHPTVRHLIDHGWLHLWRFGETGLLRFSDRQWHPLAMGADPATRQSP
What is the function of this protein?
Part of an energy-coupled inorganic carbon pump.
What are the official names of this protein?
Probable inorganic carbon transporter subunit DabA.
What is the protein family that this protein belongs to?
Belongs to the inorganic carbon transporter (TC 9.A.2) DabA family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: PPK1_PARPJ
Sequence: MSIRYPLLNRELGILGFNERVLAQAADPAVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALSPDGMSLQHVYDLVVERAQKLVHRQYTMLHDTVLTALEAEGIYFHGTEAWNEAQTEWARNYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFVVELEGKDAFGRQAMMGIVQAPRALPRLVRMPQELSGYPHGFVLLSSLLQRFVGELFPNLVVRSCNQFRITRNSELFVDEDEITNLRVALQGELPARHLGNAVRLEVSAETPTHVVRRLLDESGLSDKDCYYADGPVNLVRLMQLPEMVDRPDLKFVPHIPAIPAQVANSVSMFDVIDQGDVLLHHPYESFQPVLELLLQAAKDPNVVAIKQTIYRTGTDSPLMDALMQAARNGKEVTVVVELLARFDEETNINWASQLEAVGAHVVYGVVGHKCHAKMMLIVRRVSVGGKTTLKRYVHLGTGNYHPRTARLYTDFGLMTADQKICEDVHHVFQQLTGIGGELKLHELWQSPFTLHPKLVEAIRAEAEHARAGKKARIVAKMNALLEPTVIAELYEAAQAGVKIDLIVRGVCSLQPGVAGLSENITVRSIVGRFLEHHRIFYFYDGGKEQVYLSSADWMDRNFFRRVEVAFPINNRRLKRRVIAEGLSAFLGDNQSAWLMQSDGHYRRRRPGKSSRNAQMSLLGKFCS
What is the function of this protein?
Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).
What are the official names of this protein?
Polyphosphate kinase, ATP-polyphosphate phosphotransferase, Polyphosphoric acid kinase.
What is the protein family that this protein belongs to?
Belongs to the polyphosphate kinase 1 (PPK1) family.
Protein: ATG14_YEAST
Sequence: MHCPICHHRAHVVYCAHCINTSPSLLLKLKLDLILLKDENKELNGKVEQILNEAMNYDQLDIKRMEKKKDPLMNSLMKLDVLRMKKNNNLIRHRIEQLNERIYSKRNHISELKVEIDNYKCYKVGTGTDKLREQVEISDAKNKLAQVSKICESARDYKLNLLNNWFVIQKLQDNFQIPFAIAFQPLISLKNFRILPLAITNDSINIMWKYISFFSDILMIKLPYTNKICEQPMFEFSDSIQTVVQRLIKLIINILQICRHLKLVPSTPMDIPWLLDQYDVDGLFYNMVKRNKMKCRSVSLYWTFGMLYSMVLDNMNNPQRGHPARRTAPPPTVTGPHDRWYVVG
What is the function of this protein?
Required for cytoplasm to vacuole transport (Cvt) and autophagy as a part of the autophagy-specific VPS34 PI3-kinase complex I.  This complex is essential to recruit the ATG8-phosphatidylinositol conjugate and the ATG12-ATG5 conjugate to the pre-autophagosomal structure.  ATG14 mediates the specific binding of the VPS34 PI3-kinase complex I to the preautophagosomal structure (PAS).
What are the official names of this protein?
Autophagy-related protein 14, Cytoplasm to vacuole targeting protein 12.
What is the protein family that this protein belongs to?
Belongs to the ATG14 family.
What are the subcellular locations of this protein?
Preautophagosomal structure membrane; Peripheral membrane protein. Vacuole membrane; Peripheral membrane protein. Note=TRS85 is required for the recruitment of ATG14 to the PAS.
Protein: PT2K1_SOLTU
Sequence: MILATTGSTCATLGEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIFNSSGTIFGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFVTHTSNGDRYEFNLVDGAVATVGDPALLSLSVATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLAIQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPETYEEALKRFAKLLSDRKKLRANKASY
What is the function of this protein?
Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.
What are the official names of this protein?
Patatin-2-Kuras 1.
What is the protein family that this protein belongs to?
Belongs to the patatin family.
What are the subcellular locations of this protein?
Vacuole.
Protein: A1KA4_LOXAP
Sequence: WIMGHMVNAIAQIDEFVNLGANSIETDVSFDSSANPEYTYHGVPCDCGRTCTKWEHFNEFLKGLRKATTPGDSKYHEKLVLVVFDLKTGSLYDNQASDAGKKLAKSLLQNYWNNGNNGGRAYIVLSIPNLAHYKLITGFKEALTSEGHPELMDKVGYDFSGNDDIGDVANAYKKAGVTGHVWQSDGITNCLLRGLDRVRKAVANRDSSSGYINKVYYWTVDKRQSTRDALDAGVDGIMTNYPDVIADVLNESAYKAKFRIASYDDNPWETFKN
What is the function of this protein?
Dermonecrotic toxins cleave the phosphodiester linkage between the phosphate and headgroup of certain phospholipids (sphingolipid and lysolipid substrates), forming an alcohol (often choline) and a cyclic phosphate (By similarity).  This toxin acts on sphingomyelin (SM) (By similarity).  It may also act on ceramide phosphoethanolamine (CPE), lysophosphatidylcholine (LPC) and lysophosphatidylethanolamine (LPE), but not on lysophosphatidylserine (LPS), and lysophosphatidylglycerol (LPG) (By similarity).  It acts by transphosphatidylation, releasing exclusively cyclic phosphate products as second products (By similarity).  Induces dermonecrosis, hemolysis, increased vascular permeability, edema, inflammatory response, and platelet aggregation (By similarity).
What are the official names of this protein?
Dermonecrotic toxin LapSicTox-alphaIB1aiv, Phospholipase D, PLD, Sphingomyelin phosphodiesterase D, SMD, SMase D, Sphingomyelinase D.
What is the protein family that this protein belongs to?
Belongs to the arthropod phospholipase D family. Class II subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: AZOR_PSEU2
Sequence: MNLLHLDSSILGDHSASRQLTHEVVQAYLTAHADSQVTYRDLASDALGHFSAASLAAAGTPVEVRDAAQQQEVAGNEATLQQFLDSDVLVIGAPMYNFTIPTQLKAWFDRILIAGRTFRYSEAGPEGLCGGKKVIIVSTSGGLHAGQPTGVGHEELLKALFAFIGITDLQFVRAHGLAYGEEPRASAMSAAQHYIQNELFAA
What is the function of this protein?
Also exhibits azoreductase activity.  Catalyzes the reductive cleavage of the azo bond in aromatic azo compounds to the corresponding amines.
What are the official names of this protein?
FMN-dependent NADH:quinone oxidoreductase, Azo-dye reductase, FMN-dependent NADH-azo compound oxidoreductase, FMN-dependent NADH-azoreductase.
What is the protein family that this protein belongs to?
Belongs to the azoreductase type 1 family.
Protein: DDX17_DICDI
Sequence: MSYNSSNSGSGRYDDNRSGNSSYSSTSRGGSSYGNRSGSDRDYNRDGGSYNRDSSRDYNSSSGSGSGNGSSSYNKYPSSSSSSSSSSSTSSYGPSKGKDFQDSWGSSSTGTTNGYNGSSNGYNSSSNGYNSSNSSSSYGASNNGYNNSSGSSSSGSSGSSNGGSYNNSGSSNSNGYSKPTSNYSYSNGYTGPTTNYSSYSNGYSTPPTSTSTSSSSTTTTTTTTPSTSYNGGSTSYGYSTSGSSNGYGGYSQPPIPSYDPSSVSSYGAVTPASSSYNASVPGSSYGNSTYRSSGYGNQSYATTNSYGSSSYGSSGFYGNAKANTGSFGSALSPISWDLSKLPRFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELSNLSVTPSTSSNTKKFSPYPTYSKRY
What is the function of this protein?
Probable ATP-dependent RNA helicase which may be involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.
What are the official names of this protein?
Probable ATP-dependent RNA helicase ddx17, DEAD box protein 17.
What is the protein family that this protein belongs to?
Belongs to the DEAD box helicase family. DDX5/DBP2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: ENDP2_SALTI
Sequence: MAVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFNESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERLERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAMRLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELGANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTRTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHNMGQKERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIPSGAGLRIFYRNHRLQEDDKWRQ
What is the function of this protein?
Possible endonuclease which induces a single-strand cut and initiates DNA replication.
What are the official names of this protein?
Probable replication endonuclease from prophage-like region 2.
What is the protein family that this protein belongs to?
Belongs to the phage GPA family.
Protein: LEC1_CRAMO
Sequence: ADTIVAVELDTYPNTDIGDPSYQHIGINIKSIRSKATTRWDVQNGKVGTAHISYNSVAKRLSAVVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTILSWSFTSKSNSTADAQSLHFTFNQFSQSPKDLILQGDASTDSDGNLQLTRVSNGSPQSDSVGRALYYAPVHIWDKSAVVASFDATFTFLIKSPDREIADGIAFFIANTDSSIPHGSGGRLLGLFPDAN
What is the function of this protein?
Glucose/D-mannose specific lectin.
What are the official names of this protein?
Mannose/glucose-specific lectin Cramoll, Iso1.
What is the protein family that this protein belongs to?
Belongs to the leguminous lectin family.
Protein: LIN41_MOUSE
Sequence: MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSAGGGGPGAAARRLHVLPCLHAFCRPCLEAHRLPAPGGAGPAEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLDAVVATAEEPPPKNGRAGGGPGGAGGHSNHRHHAHHPAQRAAAPAPQPPPGPAASPGSLLMRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPAAASAAQQLGLGPPFAGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRECTLGRHGGHSFAYLQDALQDSRALTIQLLADAQQGRQALQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEDRECELLWKVEKIRQVKAKSLFLQVEKLRQSLSKLESTISAVQQVLEEGRALDILLARDRMLAQVQELKTIRGLLQPQEDDRIMFTPPDQALYLALKSIGFVSSGAFAPLTKATGDGIKRALQGKVASFTVMGYDHDGEPRHSGGDLMSVVVLGPDGNLFGAEVSDQQNGTYIVSYRPQLEGEHLVSVTLYNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVSVDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGSLWKHFDSPRGVAFNNEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDGLIVVVDFGNNRILIF
What is the function of this protein?
E3 ubiquitin-protein ligase that cooperates with the microRNAs (miRNAs) machinery and promotes embryonic stem cells proliferation and maintenance (PubMed:19898466).  Binds to miRNAs and associates with AGO2, participating in post-transcriptional repression of transcripts such as CDKN1A.  Facilitates the G1-S transition to promote rapid embryonic stem cell self-renewal by repressing CDKN1A expression (PubMed:22735451).  In addition, participates in post-transcriptional mRNA repression in a miRNA independent mechanism (PubMed:23125361).  Required to maintain proliferation and prevent premature differentiation of neural progenitor cells during early neural development: positively regulates FGF signaling by controlling the stability of SHCBP1 (PubMed:22735451).  Specific regulator of miRNA biogenesis.  miRNA Binds MIR29A hairpin and postranscriptionally modulates MIR29A levels, which indirectly regulates TET proteins expression (By similarity).
What are the official names of this protein?
E3 ubiquitin-protein ligase TRIM71, Protein lin-41 homolog, mLin41, RING-type E3 ubiquitin transferase TRIM71, Tripartite motif-containing protein 71.
What is the protein family that this protein belongs to?
Belongs to the TRIM/RBCC family.
What are the subcellular locations of this protein?
Cytoplasm, P-body.
Protein: NAPA_DECAR
Sequence: MKLNRRDFIKANAAAAAISAAGLSVPGAAVAQGKDEIRWDKAACRFCGTGCGVLVGTQDGRVVATQGDPDAPVNRGLNCIKGYFLSKIMYGADRLKTPMLRMKDGKYDKNGEFTPISWTKAFDIMEEKAKATMKAKGPNGLAMFGSGQWTIWEGYAASKLMKAGFRTNNLDPNARHCMASAVAGFMRTFGIDEPMGCYDDIEHADAFVLWGSNMAEMHPILWTRITDRKLSNKGVKVAVLSTFEHRSYELADIPMIFTPQTDLAILNYIANYIIQNGKVNQAFVDKNVNFKKSATDIGYGLRPTHALEKNATSNGYPDADGKPKGDTGKSDPITFDEFKKFVSEYTVEKVSKLSGVAEKDLKALAELYADPKVKVISFWTMGFNQHTRGTWANNLCYNIHLLTGKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPEHRKHTEELWGLPEGTIPDKVGYHAVAMARALKDGKVNFYWQQCNNNMQAGPNINEELYPGWRKPENFIVVSDPYPTVSAMAADLILPTAMWVEKEGAYGNAERRTQFWRQQVKAPGEARSDLWQLMEFSKRFKVEEVWPAELVAKAPKLKGKTLFDVLYANGVVNKYKLNETAAGFDNDDSKLIGFYIQKGLFEEYASFGRGHGHDLAPFDSYHQARGLRWPVVGGKETLWRFREGYDPYVKKGEGVKFYGHKDGKAVIFALPYQPPAESPDKEFDMWLSTGRVLEHWHTGTMTRRVPELYKAFPDAVVFMHPDDAKARGLQRGMEVKVASRRGEIQLRVETRGRNKPPRGLVFIPFFDAGRLVNKLTLDATCPISKETDYKKCAVKVTKV
What is the function of this protein?
Catalytic subunit of the periplasmic nitrate reductase complex NapAB.  Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
What are the official names of this protein?
Periplasmic nitrate reductase.
What is the protein family that this protein belongs to?
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
What are the subcellular locations of this protein?
Periplasm.
Protein: MDM12_YEAS7
Sequence: MSFDINWSTLESDNRLNDLIRKHLNSYLQNTQLPSYVSNLRVLDFDLGKVGPAITLKEITDPLDEFYDSIREEADQETEENNDNKEDSEHICPDRTIANHEGPKDDFEAPVVMPSPNDIQFLLEVEYKGDLLVTIGADLVLNYPVEKFMTLPVKLSISDIGLHSLCIVACLSKQLFLSFLCDVSDPALDDNQTVLDPKGPILAATKPLERISIVRSMKIETEIGEQYQGQGSVLRSVGELEQFLFTIFKDFLRKELAWPSWINLDFNDGDE
What is the function of this protein?
Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria.  Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria.  MDM12 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.  The MDM12-MMM1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all mitochondrial outer membrane beta-barrel proteins, and acts in a late step after the SAM complex.  The MDM10-MDM12-MMM1 subcomplex further acts in the TOM40-specific pathway after the action of the MDM12-MMM1 complex.  Essential for establishing and maintaining the structure of mitochondria and maintenance of mtDNA nucleoids.
What are the official names of this protein?
Mitochondrial distribution and morphology protein 12, Mitochondrial inheritance component MDM12.
What is the protein family that this protein belongs to?
Belongs to the MDM12 family.
What are the subcellular locations of this protein?
Mitochondrion outer membrane; Peripheral membrane protein; Cytoplasmic side. Endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side. Note=The ERMES/MDM complex localizes to a few discrete foci (around 10 per single cell), that represent mitochondria-endoplasmic reticulum junctions. These foci are often found next to mtDNA nucleoids.
Protein: RSMH_XYLF2
Sequence: MTHVPVLYTQAMEGLRVVENGTYLDGTFGRGGHARGVLQQLGPGGRLLVMDKDPEAIAMAERAFSCDPRVVIRHGSFALLAQLAAPQSLDGVLFDLGVSSPQLDVPERGFSFAKDGPLDMRMDPEMGESAAQWLARVSEREIADVLWTYGEEKQSRRIARAIVAYRANQPLLRTVQLAELIASVMLRTKFGACKSRIHPATRSFQGIRIHVNRELVDLEVGLEAALAALRPGGRLVVISFHSLEDRIVKQFISRHSKVPPTNRRLPEVQTFVPLLRMIGRAIKADEDELEVNPRARSAVLRVAEKLDVLGAVR
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NQRD_VIBA3
Sequence: MSSAKEIKKSILAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTIAVMFVTALSNFFVSLIRNHIPNSVRIIVQMAIIASLVIVVDQVLKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKSAPIPSFIDGLGNGLGYGFVLITVGFFRELLGSGKLFDMEVLPLVSNGGWYQPNGLMLLAPSAFFLIGFLIWAIRVFKPEQVEAKG
What is the function of this protein?
NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm.  NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
What are the official names of this protein?
Na(+)-translocating NADH-quinone reductase subunit D, Na(+)-NQR subunit D, Na(+)-translocating NQR subunit D, NQR complex subunit D, NQR-1 subunit D.
What is the protein family that this protein belongs to?
Belongs to the NqrDE/RnfAE family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RLMH_GEOMG
Sequence: MKLKILWVGKTQEEWLRRGIDEYTGRIRRYTPLEIAEAREEKGAAAEAMRTRECERLEKLVPKNARLVLLDERGDQLTSPELAAFMGKCRDSAVPEMVFAIGGAYGFADSFRARADRVLALSRLTFTHQMVRVILLEQIYRAHTILNGEPYHHS
What is the function of this protein?
Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase H, 23S rRNA (pseudouridine1915-N3)-methyltransferase, 23S rRNA m3Psi1915 methyltransferase, rRNA (pseudouridine-N3-)-methyltransferase RlmH.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase RlmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YQGF_STRZJ
Sequence: MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIQINEEQGQFGFDRVKELVDTYKVERFVVGLPKNMNNTSGPRVEASQAYGAKLEEFFGLPVDYQDERLTTVAAERMLIEQADISRNKRKKVIDKLAAQLILQNYLDRKF
What is the function of this protein?
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA.
What are the official names of this protein?
Putative pre-16S rRNA nuclease.
What is the protein family that this protein belongs to?
Belongs to the YqgF nuclease family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CHED_METM6
Sequence: MVLKVKMGDIGVAKSPESIETLLGSCVAIILYDRGKKVGGVAHVMLPKSRNAAEKNPGKYADTALPELLDRMTKLGARKDKLTAKLAGGAAMFKCNSNTIDVGKKNIEASKEEVRKVGLRIASEDLGGDIGRTITLSLKDGSVIVRKGAELKTI
What is the function of this protein?
Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.
What are the official names of this protein?
Probable chemoreceptor glutamine deamidase CheD.
What is the protein family that this protein belongs to?
Belongs to the CheD family.
Protein: PSBF_OENBE
Sequence: MTIDRTYPIFTVRWLAVHGLAVPTVSFLGSISAMQFIQR
What is the function of this protein?
This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Cytochrome b559 subunit beta, PSII reaction center subunit VI.
What is the protein family that this protein belongs to?
Belongs to the PsbE/PsbF family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: RS9_STRPQ
Sequence: MAQAQYAGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRLIINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR
What are the official names of this protein?
30S ribosomal protein S9.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS9 family.