PharMolix/UniProtQA huggingface dataset:
Protein: EFG_AGRFC
Sequence: MAREYKIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWKGRDGKMRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTETVWRQAEKYNVPRMIFCNKMDKTGADFYRSVEMIKTRLGATAVVMQLPIGAETEFKGVIDLIEMNALIWRDESLGAQWDVVEIPDDLKAKADEYREKLIETVVEIDEEAMEDYLNGIMPDNDKIRALVRRGTIDVKFHPMFCGTAFKNKGVQPLLDAVVDYLPSPLDIPAIKGIDFKTEAEIERHADDSEPLSMLAFKIMNDPFVGSLTFARIYSGKLEKGTSVINTVKDKRERVGRMLQMHSNSREDIEEAFAGDIVALAGLKETTTGDTLCDPLKPVILERMEFPEPVIQIAIEPKTKGDQEKMGLALNRLAAEDPSFRVKTDEESGQTIIAGMGELHLDILVDRMRREFKVEATVGAPQVAYRETITRQHEEDYTHKKQSGGTGQFARVKIIFEPNPEGEDFKFESKIVGGAVPKEYIPGVQKGIESVLSSGPLAGFPMLGVKATLIDGAYHDVDSSVLAFEIASRACFREAAKKAGAQLLEPMMKVEVVTPEDYVGDVIGDLNSRRGQIQGQESRGITIVISAHVPLANMFKYVDNLRSMSQGRAQYSMTFDHYSPVPSNVAQEIQAKYSGQK
What is the function of this protein?
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation.  During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively.  Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
What are the official names of this protein?
Elongation factor G, EF-G.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1359_METJA
Sequence: MKRVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKSIFCQQFLYKGVVDYNEPSILVALEEHPVQIRENMRQFGWDIRKLEEEGKFAIIDAFTYGIGSAAKREKYVVNDPNDERELIDVLKTAINDIGAKRIGIDSVTTLYINKPMLARRTVFLLKRVISGLGCTAIFTSQISVGERGFGGPGVEHAVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSLKRHPFDITNEGIIVYPDKVLKLR
What are the official names of this protein?
UPF0273 protein MJ1359.
What is the protein family that this protein belongs to?
Belongs to the UPF0273 family.
Protein: RL20_RHILW
Sequence: MARVKRGVTAHAKHKKVLKAAKGFYGRRKNTIRTAKAAVDRSKQYAYRDRKVNKRNFRALWIQRINAAVREFGLTYGRFIDGLNKAGIEVDRKVLSDMAIHEPEAFGALVNAAKKALEYLKEAGTANEFEGAVK
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
Protein: BUD4_KLULA
Sequence: MQMEDKGEALNPDAMYSLLKEIDQEISHTDNISIDQLPEEDTLDNEKKIDASENVIENTEEEALQLGDESANTTTEIKETSCTEDHDTVENTEDVISMAEGLDKAPLETAWIKHNYQQTKPVVSKRLISNDGSDTSVEDINASTRIPSYTSEEITGLELKDKMVTDVGERLSHFLDQKYAENPNLPALKGMLSMADEKAMEDDPKKDKPLVFTIEPTKPLFPSKEVSSTMIQVEIHTPDEDDVDGAAADTKEATNLLLDSKIPVTPNVCINRFVNNNGETRVSSGSSTEDAQELNTHRFQDRYHLLSGAQAVPQLPQLPALTLQDYKSSSVQSVNASRIFSVATTNDNYQSAKEYDLSSTVGCEELSDDASVKDLEIPEPNELPCFPTFQLDSTSMKTSSSMETVQHDKAKFNSDVNIADDTMEQIEQEEAELISNPERSGSPTNDNMSQHSQNRQLLGVSEVSQAQQAPEHHVEMSVEFQDEGRRDITSSFSRESDRIELPPLPPMNGLSTMFDQDLFNDHETSHESIDLTSSSHKENYLSIWHSQKTGGSFISPALSTNSQFSTQSRTSSVPTNHSGSSFKFKSRIISNSHVFKQEAFRQFSDEYVLSTQDDSKLDPLRRNTIMSKRIQQELKTQAKMYPFANKFALDESSEPSIHNESIITGDISRTSDKAVDTTNILSHKNLTLLPPQSTETVFSSFLDNFDKDDFEEKLAEESRLNSKKNLQTTWGHFRDVSSGNVDIKATQQQIAEVLHNQNEDVVQVGSHIQDVKVLLGNEIEGYDVQKSVSDLSVETTKKSPIKHVGSPFKVKARSETPPQSPVVYERDTTEVNEGLQRAPTTSLASVYLENSLQEFESSELQDHGKLYLKLKSINSLRLQQIKRHNAKYCIEFDNGKEVIETPWESIPEDGPIKMSQEFEVNMESNNVTLFMTMKIRYTSPQNQLTEVVEKIPIKKRFAFGKTKYRLEKRFVTKKLKYDDWDFKFAKDGSFARCQVNVNKNMLKQIKYKTNELHFEFLNEWEREFDEKIAQTYKEDELWKLPRKNPSKVCSLTVDVMYLPRTSSMERFPKNLKAVQKCCEKYLEQQRVNNEGFLWQEGGDVEGMLKRRYMILKGTELIAHDEVTRKPQTLLNLLNVVDIYSDGKTATGKQMRNFTDMVLFSDCFKLLFANDEVINFNADSNLLKQQWVEILTSVVELNKFHQPWIKRVFENEQYNITF
What is the function of this protein?
Required for selection of future bud sites.  Cooperates with other bud site selection proteins to recognize a spatial landmark during mitosis and they subsequently become a landmark for downstream polarity establishment factors that coordinate budding and cytokinesis.  Involved in the septin organization at the bud neck (By similarity).
What are the official names of this protein?
Bud site selection protein 4.
What is the protein family that this protein belongs to?
Belongs to the BUD4 family.
What are the subcellular locations of this protein?
Bud neck. Note=Localizes to two distinct rings on either side of the mother-bud neck.
Protein: RL18_IDILO
Sequence: MDNKAARLRRATRARKQIKELGANRLVVHRTPRHIYAQLIAPNGSEVLAAASTAEKSVREGLKSTGNVDAAKVVGKTIAERAIEKGVKNVSFDRSGFKYHGRVAALADAAREAGLQF
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: SYGA_PSEPK
Sequence: MSQPTPAVRTFQDLILALQNYWAAQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPADGRYGENPNRLQHYYQFQVVLKPNPANFQELYLGSLKAIGLDPLVHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGIECYPVTGEITYGLERLAMYIQGVDSVYDLVWADGPFGKVTYGDVFHQNEVEQSTYNFEHANVDKLFELFDFYESEANRLIKLELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARDVAQSYLQARARLGFPMATPELRDEVLAKLEAAQ
What are the official names of this protein?
Glycine--tRNA ligase alpha subunit, Glycyl-tRNA synthetase alpha subunit, GlyRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KITH_YERPS
Sequence: MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTLVFTAEIDNRFGVGTVSSRIGLSSQAQLYNSGTSLLSIIAAEHQDTPIHCILLDECQFLTKEQVQELCQVVDELHLPVLCYGLRTDFLGELFPGSKYLLAWADKLVELKTICHCGRKANMVLRLDEQGRAVHNGEQVVIGGNESYVSVCRRHYKEAIKAACCS
What are the official names of this protein?
Thymidine kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidine kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PAR1_CAEBR
Sequence: MSTVSSYFMGISSKKNGSSATANKQSTRPQESHHHRRQQPTSQQSTEMNGTTTAPSGGTSSGTTTTSSGVPTASTGGGSARYSSSSSGRSHPTTGGGSSSHARSSGQSGMSSRSAARRNDQDVHVGKYKLLKTIGKGNFAKVKLAKHVITGHEVAIKIIDKTALNPSSLQKLFREVKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYLHSKNIIHRDLKAENLLLDQDMNIKIADFGFSNTFSLGNKLDTFCGSPPYAAPELFSGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVINPQRRSSLDNIMKDRWMNVGYEDDELKPFIEPPKDQIDEQRIEKLIQIFQLGFNKATILESVEKEKFEDIHATYLLLGERKSDPSRYSRSSATATGPSITSGAALASAANAQKHQSSAAPASGSSSSRRSSQNDAAASGAGGTVVMSGTRHGGVQMRAQPTSRQAAISLLQPPSYKPSSNTTQIAQIPPLFNRNSTATSSTNQPSSGITAGTRKIDPKGRIPLNSAAVQSHRTATGAVAANTGGIPSQRDHSQQQQQYMNQLTSSSMMSKLINKTPAAGGANATTSATSAAAAPLQKSGSQISHAPTEPVIREDDDESNSEHQNGNVPLIGGVGPQTSPVVAPSEDVTSSEQQKQEKASSEAPKETKPSMIHQSPSMPPSQMMTAMESLKLSESGGKSPSNSQQPPQRATSQQMSRSATTNSAANMASNQQSSGAPQQSGASSQQCHTKPSSTSSSSSSSTTAPTSSGQPHHQHQLTHNASFSVTPSAYQMPTTTTITSGAPTSSSAFPRNTRNRQTFHGKTEKDKGGDDGSDEIGDTPANVSIGATGASANNTEGTIWSKLSKLTRRDHNRESMTQPVSSRAGTIGAAQGQQTAAALAAIREQSSGPLTPGTPPVAQAMTQEGDVKPRSLRFTWSMKTTSSLAPDDMMREIRKVLDANGCDYEQRERYMILCVHGDPNTDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIGFKNIASKIAQELNL
What is the function of this protein?
Required for cytoplasmic partitioning and asymmetric cell division in early embryogenesis.  Phosphorylates and restricts the asymmetry effector mex-5 (and possibly also mex-6) to the anterior cytoplasm of the zygote.  Regulates mes-1 expression during early embryogenesis.  Critical role in postembryonic vulval morphogenesis.
What are the official names of this protein?
Serine/threonine-protein kinase par-1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm, cell cortex. Note=Colocalizes with germ granules (P granules).
Protein: EFG_ECOSM
Sequence: MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK
What is the function of this protein?
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation.  During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively.  Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
What are the official names of this protein?
Elongation factor G, EF-G.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GCH4_DESVV
Sequence: MEDVQNSPAQVAMPIDRVGVKNLQLPLVVSDRAQGRQHTVATVDIGVDLPAHFKGTHMSRFVEALENWTEELDYASMKRLLEDVKTRLEARKAYVLFRFPYFIRKKAPATGSPGLVCYQCRLTGELEEGRPSFLLEVEVPVMTVCPCSKAISDEGAHSQRAVVRIAVRMTRFSWLEEFIDLAEVSGSSPVYTLLKREDEKFVTEDAFAHPTFVEDVVRAAAQRLERHPQISWFRVEVESFESIHCHNAFASIERTITPETQPGS
What is the function of this protein?
Converts GTP to 7,8-dihydroneopterin triphosphate.
What are the official names of this protein?
GTP cyclohydrolase FolE2.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase IV family.
Protein: SYL_STAAE
Sequence: MLNYNHNQIEKKWQDYWDENKTFKTNDNLGQKKFYALDMFPYPSGAGLHVGHPEGYTATDIISRYKRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPREFTKKNIQTFKRQIKELGFSYDWDREVNTTDPEYYKWTQWIFIQLYNKGLAYVDEVAVNWCPALGTVLSNEEVIDGVSERGGHPVYRKPMKQWVLKITEYADQLLADLDDLDWPESLKDMQRNWIGRSEGAKVSFDVDNTEGKVEVFTTRPDTIYGASFLVLSPEHALVNSITTDEYKEKVKAYQTEASKKSDLERTDLAKDKSGVFTGAYATNPLSGEKVQIWIADYVLSTYGTGAIMAVPAHDDRDYEFAKKFDLPIIEVIEGGNVEEAAYTGEGKHINSGELDGLENEAAITKAIQLLEQKGAGEKKVNYKLRDWLFSRQRYWGEPIPVIHWEDGTMTTVPEEELPLLLPETDEIKPSGTGESPLANIDSFVNVVDEKTGMKGRRETNTMPQWAGSCWYYLRYIDPKNENMLADPEKLKHWLPVDLYIGGVEHAVLHLLYARFWHKVLYDLAIVPTKEPFQKLFNQGMILGEGNEKMSKSKGNVINPDDIVQSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMVNEDGTLSSKIVTTNNKSLDKVYNQTVKKVTEDFETLGFNTAISQLMVFINECYKVDEVYKPYIEGFVKMLAPIAPHIGEELWSKLGHEESITYQPWPTYDEALLVDDEVEIVVQVNGKLRAKIKIAKDTSKEEMQEIALSNDNVKASIEGKDIMKVIAVPQKLVNIVAK
What are the official names of this protein?
Leucine--tRNA ligase, Leucyl-tRNA synthetase, LeuRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TMTC4_DROME
Sequence: MLDLVHKATLHSMVCQAILVLICLLCYGCGGLSGAKFVFDDTVAIVKNRDVNSLPTNWTAIFTHDFWGASLLSSDSHKSFRPLTTLMFHCEYALLGLSAAHMKFLNLLLHCVNTLLMWRLIRSLYVPEVSTARWAILSAALFAAHPIHTEAVSGVVGRAELMFGMIHLLCLLLTVANTGRLGPQTGGLIMLLTAVGMLFKESAVTIPMSCVLLDYFQNGYYHLRFKDQWSLLRTRISYLFYLLGTLGLLTARLWWQDFETPTFKEVDNPVAHNEHVLTRGLSQQYLLVMNIWLMLCPHWLCYDWALGCVKLVTNIWDLRLQGVIGFYSIVLVALMNFRRLPGMMLALGLMIVPFLPASGIICVGFVIAERTLYVPSIGFCLLSIYGFLYWYDSSTENTHWRTALRILLMLLFSVMMVRTRQRATDWLNEEQLFKSALQVCPDNAKVHYNIARLATDMGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQPKAWANILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVLGKLKHYTEAEAIYKRVIELEPHNTLYHTNLGVLYHRWDKTQEAIEAYRTAISISAARATTARENLSKLLKRLEREAQVMQR
What is the function of this protein?
Transfers mannosyl residues to the hydroxyl group of serine or threonine residues.
What are the official names of this protein?
Protein O-mannosyl-transferase TMTC4, Transmembrane and TPR repeat-containing protein CG5038.
What is the protein family that this protein belongs to?
Belongs to the TMTC family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein. Endoplasmic reticulum.
Protein: RL11_SYNS9
Sequence: MAKKVVAVIKLALQAGKANPAPPVGPALGQHGVNIMMFCKEYNARTQDKAGLVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGDSAKGSVGSISRAQLEEIAKTKLPDLNCSSVDSAMRIIEGTARNMGVAVSD
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL11 family.
Protein: SYI_BORBU
Sequence: MFKKVENKANFPKIEEKILKFWNDNKIFEKSIKQREGCEEFTFYDGPPFATGLPHFGHFVPNTIKDIIPRYQTMQGKYVKRNFGWDTHGLPVEYEVEKKLGISGKYEIENYGIENFNKECRKIVLRYTEEWKNIILRLGRWVDFEKGYKTMDISFMESVWWVFKNLYEKGLIYESYYVLPYSPKLATPLSNFEVNLGEYKEVNDPSLTIKFKIKDKNEYLLVWTTTPWTLPSNLGIAVGQEIEYSKIFDKTKEEILILGSKKLNSYYDDENSYTIIEKFKGSKLEGIEYEPIFNYFLEQKDKGAFKVHTADYVTTDDGTGIVHIAPFGEEDYRILKKHTNVDIIDPLDAECKFTNQVKDFKGLFVKDADKKIIENLKLRNFLFKRENYLHRYPFCYRTNCPIIYRPISSWFVNVEKIKTKLLEVNEKINWMPAHLKKGRFGKWLENAKDWAISRNRFWGNPIPIWICSKTGKKICIGSKKELENLSGQKIEDLHKDQIDKITWPSKDGGKFIRTSEVLDCWFESGAMPYASNHYPFTNEINFKNIFPADFIAEGLDQTRGWFYTLTILGTALFENTAFKNVIVNGLVLSSDGRKMSKSFKNYTDPMQVINTFGADALRLYLIMSPVVKADDLKYSDNGVRDVLKNIIIPIWNAYSFFTTYAIIDKFKPPKNLSLAKNNNLDKWIISELESLKKILNTEIDKYNLTKSIESLLEFIDKLNNWYIRRSRRRFWKSENDKDKNDAYETLYYAIKTLMILLAPFIPFITEEIYQNLKTDEDKQSIHLNDYPKANENFINKTIEEKINLARKITSMARSLRSLHNIKIRMPISTIYIVTKNQNEQNMLMEMQEIILDEINAKEMKIKANEEELITYKAKANFKELGKKLGKDMKAVSTEISKLKNEDIIKIINGTSYEIKVANAKHYLSLNDIILEREEKENLKVINEESITIGIDSLITKELYLEGLTREFVRQIQNLRKEKNFDVSDRINLYIENNETLKEMLNKFEKYIKTETLALNIILNKSKLEKKINLADDIFTLIGIEKC
What is the function of this protein?
Catalyzes the attachment of isoleucine to tRNA(Ile).  As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities.  One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP.  The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
What are the official names of this protein?
Isoleucine--tRNA ligase, Isoleucyl-tRNA synthetase, IleRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TRMA_SHIBS
Sequence: MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIALDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQFETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECGVLLTAK
What is the function of this protein?
Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).
What are the official names of this protein?
tRNA/tmRNA (uracil-C(5))-methyltransferase, tRNA (uracil(54)-C(5))-methyltransferase, tRNA(m5U54)-methyltransferase, RUMT, tmRNA (uracil(341)-C(5))-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. TrmA subfamily.
Protein: RS28_PICTO
Sequence: MEDDATPAEVVEIMGRTGMTGEATTVKVRVLSGKDQGRIIARNVLGPVKVGDVLMLRETAREARKLSIR
What are the official names of this protein?
30S ribosomal protein S28e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eS28 family.
Protein: ABEC1_MESAU
Sequence: MSSETGPVVVDPTLRRRIEPHEFDAFFDQGELRKETCLLYEIRWGGRHNIWRHTGQNTSRHVEINFIEKFTSERYFYPSTRCSIVWFLSWSPCGECSKAITEFLSGHPNVTLFIYAARLYHHTDQRNRQGLRDLISRGVTIRIMTEQEYCYCWRNFVNYPPSNEVYWPRYPNLWMRLYALELYCIHLGLPPCLKIKRRHQYPLTFFRLNLQSCHYQRIPPHILWATGFI
What is the function of this protein?
Cytidine deaminase catalyzing the cytidine to uridine postranscriptional editing of a variety of mRNAs.  Form complexes with cofactors that confer differential editing activity and selectivity.  Responsible for the postranscriptional editing of a CAA codon for Gln to a UAA codon for stop in the apolipoprotein B mRNA.  Also involved in CGA (Arg) to UGA (Stop) editing in the NF1 mRNA (By similarity).  May also play a role in the epigenetic regulation of gene expression by participating in DNA demethylation (By similarity).
What are the official names of this protein?
C->U-editing enzyme APOBEC-1, Apolipoprotein B mRNA-editing enzyme catalytic polypeptide 1, APOBEC-1, Apolipoprotein B mRNA-editing enzyme 1, mRNA(cytosine(6666)) deaminase 1.
What is the protein family that this protein belongs to?
Belongs to the cytidine and deoxycytidylate deaminase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1203_STRZJ
Sequence: MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEEFGVSRQAVYDNIKRTEKILEDYEMKLHMYSDYIVRSQIFDQILERYPKDNFLQEQIEILTSIDNRE
What is the function of this protein?
Might take part in the signal recognition particle (SRP) pathway.  This is inferred from the conservation of its genetic proximity to ftsY/ffh.  May be a regulatory protein.
What are the official names of this protein?
UPF0122 protein SPJ_1203.
What is the protein family that this protein belongs to?
Belongs to the UPF0122 family.
Protein: RNZ_STRZJ
Sequence: MDIQFLGTGAGQPSKARNVSSLALKLLDEINEVWLFDCGEGTQNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFVLTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGTLDAEKLKAAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRKTGASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHISARFLSKDISKLKKDAATIFENVHVVKDLEEVEI
What is the function of this protein?
Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity.  Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.
What are the official names of this protein?
Ribonuclease Z, RNase Z, tRNA 3 endonuclease, tRNase Z.
What is the protein family that this protein belongs to?
Belongs to the RNase Z family.
Protein: MNME_BURPS
Sequence: MLATDSDPIVAIATASGRGGIGVVRLSLGRAGEAAARALSDALCGARLMPRHASYVPFLDGAGEPLDRGIALYFPAPHSYTGEHVIELQGHGGPIVLQLLLQRCLDAGRAHGLRLAEPGEFTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVDDVIALRMLVEATLDFPEEEIDFLEAADARGKLAHIRERLAHVLGDARQGALLREGLSVVLAGQPNVGKSSLLNALAGAELAIVTPIAGTTRDKVAQTIQIEGIPLHIIDTAGLRETEDEVEKIGIARTWGEIERADVVLHLLDARSGLGPGDEAIAARFPDGVPVVRVLNKTDLTGAPASVTRTGGGAARADVCEVRLSAKRGDGIDLLRGELLRIAGWQAGAESVYLARERHLIALRAAQAHLARAAEHAEQNAQALDLFAEELRLAQERLNSITGEFTSDDLLGVIFSRFCIGK
What is the function of this protein?
Exhibits a very high intrinsic GTPase hydrolysis rate.  Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA modification GTPase MnmE.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: THHR_HORVU
Sequence: ATITVVNRCSYTVWPGALPGGGVRLDPGQRWALNMPAGTAGAAV
What is the function of this protein?
Has antifungal activity.  Inhibits the growth of Trichoderma viridae and Candida albicans.
What are the official names of this protein?
Antifungal protein R.
What is the protein family that this protein belongs to?
Belongs to the thaumatin family.
Protein: TRAG_RHIRD
Sequence: MTVNRLLLLILPAAIMVAAMILTSGMEHRLAALGTTVQAKLMLGRAGLALPYIVAAAIGVIALFATNGSANIKAAGLSVLGGGAAVIIVAIAREIIRLNGISSHVPAGQSVLAYCDPATMVGAAAALFSGIFGLRVALKGNAAFATGGPRRIGGKRAVHGETDWMKMQEAAKLFPDTGGIVIGERYRVDRDSVAAMPFRADEKQSWGAGGKVPLLCFNGSFGSSHGIVFAGSGGFKTTSVTLPTALKWSSGLVVLDPSSEVAPMISEHRRQAGRKVIVLDPTASGVGFNALDWIGRHGNTKEEDIVAVATWIMTDNPRTASARDDFFRASAMQLLTALIADVCLSGHTEGEDQTLRQVRANLSEPEPKLRARLTKIYEGSESDFVKENVAVFVNMTPETFSGVYANAVKETHWLSYPNYAGLVSGDSFSTGDLADGRTDIFIALDLKVLEAHPGLARVVIGSLLNAIYNRNGNVKGRTLFLLDEVARLGYLRILETARDAGRKYGITLTMIFQSLGQMREAYGGRDATSKWFESASWISFSAINDPDTADYISKRCGDTTVEVDQTNRSTGMKGSSRSRSKQLSRRPLILPHEVLRMRGDEQIVFTSGNPPLRCGRAIWFRRDDMSASVGENRFQPENKA
What are the official names of this protein?
Conjugal transfer protein TraG.
What is the protein family that this protein belongs to?
Belongs to the VirD4/TraG family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: TAF2_HUMAN
Sequence: MPLTGVEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGGGKEKDNPASHLHFSIKHPHTLSWEYYSMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVAGNQEAANNPSSHPQLVGFQNPFSSSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPASSRSALIPQHSAGCDSTPTTKPQWSLELARKGTGKEQAPLEMSMHPAASAPLSVFTKESTASKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD
What is the function of this protein?
The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription (PubMed:33795473).  TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) (PubMed:33795473).  The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 (PubMed:33795473, PubMed:9418870, PubMed:9774672).  TAF2 forms a promoter DNA binding subcomplex of TFIID, together with TAF7 and TAF1 (PubMed:9774672, PubMed:33795473).
What are the official names of this protein?
Transcription initiation factor TFIID subunit 2, 150 kDa cofactor of initiator function, RNA polymerase II TBP-associated factor subunit B, TBP-associated factor 150 kDa, Transcription initiation factor TFIID 150 kDa subunit, TAF(II)150, TAFII-150, TAFII150.
What is the protein family that this protein belongs to?
Belongs to the TAF2 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: TRMD_MESH2
Sequence: MKINILTLFPRYFEVFCRESIIGKAIKHKKITINVVNFRDFSKNKHKKVDDYVYGGGPGLLLQIQPVVDALEKVGGLKIALSPQGQKFDQGVARKLAKEDEITILCGHYEGFDQRIIDNFIDFELSLGDFILTGGEIAAMAIIDAIIRLKPDIINPESLKNETFNDFLLDFPQYSRPANFRGLEVPNVLISGNHREIGEWRQEQRELITKKKRPDLWEKFLKIKNKK
What is the function of this protein?
Specifically methylates guanosine-37 in various tRNAs.
What are the official names of this protein?
tRNA (guanine-N(1)-)-methyltransferase, M1G-methyltransferase, tRNA [GM37] methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase TrmD family.
What are the subcellular locations of this protein?
Cytoplasm.