PharMolix/UniProtQA huggingface dataset:
Protein: EFP_THET2
Sequence: MISVTDLRPGTKVKMDGGLWECVEYQHQKLGRGGAKVVAKFKNLETGATVERTFNSGEKLEDIYVETRELQYLYPEGEEMVFMDLETYEQFAVPRSRVVGAEFFKEGMTALGDMYEGQPIKVTPPTVVELKVVDTPPGVRGDTVSGGSKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYVGRA
What is the function of this protein?
Involved in peptide bond synthesis.  Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro.  Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
What are the official names of this protein?
Elongation factor P, EF-P.
What is the protein family that this protein belongs to?
Belongs to the elongation factor P family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UVRA_CHLMU
Sequence: MPSIVRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPSFFATRIHSLPDPAVKKVEGLSPTVAVKQNFFAQHVHATVGSTTEINSYLALLFSLDGQAYDPITLRPLTLYSKEKILAEIAAIPDGTQLTLLAPLPAGDILRVRECLRQGFTKILIDGEISPIHKFLATGVPVPSQLIIDTLIKNASNTPRLKVSLFTTLDIGHGECCLHFDNQKRVFSTQTTLPETQNTYTPLSPDLFSSHSHKDRCPQCHGSGIFVSINDPSIIQQNLSIEKNCCPFAGSCSILLYKTIYQSLADNLGFSLSTPWQDLSPEIQHIFLYGKEGLSLPVKLFDGTLGKTTQTHKQWKGVLNEIGEKIRFANKPSRYLPKGTSYTECPRCQKTGLSDYANAAKWHGKSFADLQQMSLQELFIFLNQLPPKDPAIEEVIQGLKARLAMLIDLGLPYLSPERSVNTLSGGEQERTALAKHLGAELMGVTYVLDEPSIGLHPQDTYKLMDVIKKLRDQGNTILLVEHDEQMISLADRVIDVGPGAGIFGGEVVFNGTPKEFLANSHSLTAQYLRQEQQIPIPAKRQTSLGSITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLVPCVEEFIEQGSCPNLAVQGKLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAEQPRCKPLGLTKSHFSFNTPLGACSECGGLGSITAMDNQDSITCPSCSGKRFLPQVLEIRYKNKTIADILEMTAYEAESFFLDQPSIHNKIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLACELSNPVKHPTLYVLDEPTTGLHTHDVKQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYVLELGPEGGNKGGCLIASCSPEELIHKHTPTSLALRPFLSQHQELPHLPDLRQQPPIPAAIIITNAHHHNLKHIDVSIPRYALTTVTGPSASGKHSLVFDVLHAAGNISYAELFPPYIRQALIKKTPLPSVDKVIGLSPVIAIEKNSAKNSSHSVASALEISDMLEELFTQIGRPYSPVSGDLLKEVSPQTIAEELLENYAQGYVTITIPFPPEEDFFSYTQEMLREGFLKLYANEQLYDLEGPFPDCLESPALVIHHVKILEKNIPSILSSLSLAFSKSSSIRLHIENYGITTSKTYQLGLQDSLGNSFPSNDNTTHLCPFCHGNGSLSTFSILPYKNRFAEHTPLSLFTSLFPNQDPTPIYPLLEELGIPSIALFQEMDDHSFQKLCLGTLQNPGFDALCTKAMLAHPTTNFPTYLISETPCNQCQGNGTYTYEHCTRIHDISLSDIYQSDVPFLKKFLLSLGKDLPLVSDIFQKLELLERVGLSQVILGQEQSSLSDGERYQLLLAKAFSSGLTDVIYLLEDPLAGIHPKDAPSLLSVIKDLVANHNTVVVTDREGSLSKHADHVIHLGPEPGPNGGYLLETSAFRDLQPISQSTYISDQIPKLSVSVLTSAIQIDNLSIPLRSLSTISGVSGSGKTTLLLEGIYKSGCAMLEKDPSLFSEIIFLDSHPQPASSRSDISTYFDIAPSLRNFFSSLTQAKALNISASMFSPNTKQGQCSDCWGLGYQLIDRAFYAMEKRSCPTCGGFRVQPLVQEVVYEGKHFGQLLQSSLNEVAKDFSFLKKVQKPLQTLIANGLGYLPLGQNMSSLSLSEKIAIKITKYLFLPPKHPTLFLLDGVATSLDNQQKYTLLSQLKTLVSLGHTVVIIENHPAFSQYADFLIQMGHKTDKTSSRIIFSGINQSPSLSNKLE
What is the function of this protein?
The UvrABC repair system catalyzes the recognition and processing of DNA lesions.  UvrA is an ATPase and a DNA-binding protein.  A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities.  When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (By similarity).
What are the official names of this protein?
UvrABC system protein A, UvrA protein, Excinuclease ABC subunit A.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. UvrA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MTKA_METEA
Sequence: MDVHEYQAKELLASFGVAVPKGAVAFSPDQAVYAATELGGSFWAVKAQIHAGARGKAGGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQRVYVETADPFERELYLGYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGLQQFQAREIAFQLGLNIKQVSAAVKTIMNAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIADMHDPSQGDPREAQAAEHNLSYIGLEGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVGGGASPDRVATAFRLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLIVRLAGTNVDEGKKILAESGLDLITADTLTEAARKAVEACHGAKH
What are the official names of this protein?
Malate--CoA ligase subunit beta, MTK-beta, Malate thiokinase, Malyl-CoA synthetase.
What is the protein family that this protein belongs to?
Belongs to the succinate/malate CoA ligase beta subunit family.
Protein: RS7_ECO5E
Sequence: MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: RIBA_BUCAI
Sequence: MQLIEKAMLPTPWGNFLIFGFEEKKNGKNHVALVYGDIKTNTPTLSRVHSECLTGDAFFSLRCDCGSQLEMSMKRISQEGSGVLIYHRQEGRNIGLLNKIKAYALQDRGLDTVQANQKLGFSADERDFSLCADIFNILNIKKIRLLTNNPFKVQMLSDAGINIVERVPLIVKKNPKNAYYLKTKAEKMGHLLSE
What is the function of this protein?
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
What are the official names of this protein?
GTP cyclohydrolase-2, GTP cyclohydrolase II.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase II family.
Protein: IGHD_HUMAN
Sequence: APTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPRSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVSYLAMTPLIPQSKDENSDDYTTFDDVGSLWTTLSTFVALFILTLLYSGIVTFIKVK
What is the function of this protein?
Constant region of immunoglobulin heavy chains.  Immunoglobulins, also known as antibodies, are membrane-bound or secreted glycoproteins produced by B lymphocytes.  In the recognition phase of humoral immunity, the membrane-bound immunoglobulins serve as receptors which, upon binding of a specific antigen, trigger the clonal expansion and differentiation of B lymphocytes into immunoglobulins-secreting plasma cells.  Secreted immunoglobulins mediate the effector phase of humoral immunity, which results in the elimination of bound antigens (PubMed:22158414, PubMed:20176268).  The antigen binding site is formed by the variable domain of one heavy chain, together with that of its associated light chain.  Thus, each immunoglobulin has two antigen binding sites with remarkable affinity for a particular antigen.  The variable domains are assembled by a process called V-(D)-J rearrangement and can then be subjected to somatic hypermutations which, after exposure to antigen and selection, allow affinity maturation for a particular antigen (PubMed:17576170, PubMed:20176268).  IgD is the major antigen receptor isotype on the surface of most peripheral B-cells, where it is coexpressed with IgM.  The membrane-bound IgD (mIgD) induces the phosphorylation of CD79A and CD79B by the Src family of protein tyrosine kinases.  Soluble IgD (sIgD) concentration in serum below those of IgG, IgA, and IgM but much higher than that of IgE.  IgM and IgD molecules present on B cells have identical V regions and antigen-binding sites.  After the antigen binds to the B-cell receptor, the secreted form sIgD is shut off.  IgD is a potent inducer of TNF, IL1B, and IL1RN.  IgD also induces release of IL6, IL10, and LIF from peripheral blood mononuclear cells.  Monocytes seem to be the main producers of cytokines in vitro in the presence of IgD (PubMed:8774350, PubMed:10702483, PubMed:11282392).
What are the official names of this protein?
Immunoglobulin heavy constant delta, Ig delta chain C region, Ig delta chain C region NIG-65, Ig delta chain C region WAH.
What are the subcellular locations of this protein?
[Isoform 1]: Secreted. SUBCELLULAR LOCATION: [Isoform 2]: Cell membrane; Single-pass type I membrane protein.
Protein: BIOD_CYTH3
Sequence: MKKYFITAISTDSGKTLVSAILTNALQADYWKPVQAGLEETDSNTIRTLLHSGHSIIHPEAYALKQAVSPHAAARNEGVEIVLAAIQLPDTNGNDLIIEGAGGVLVPLNDTDVVADLITQFDAEVILVSNLYLGSINHTLLTAQELKRRNIRVKGIVFNGPRNEESERIILKHTGYKVLLHVSPEEKITKEVVTAYAVKLFDNWYE
What is the function of this protein?
Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA, also called 7,8-diammoniononanoate) to form a ureido ring.
What are the official names of this protein?
ATP-dependent dethiobiotin synthetase BioD, DTB synthetase, DTBS, Dethiobiotin synthase.
What is the protein family that this protein belongs to?
Belongs to the dethiobiotin synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RNB_ACTPJ
Sequence: MFQNNPLLAQLKQQIEANKEYVEGTVKASDKAFGFLECDKKSYFIPPMEMKKVMHGDKVKAVVKREDDKEQVEIDSLLEPMLDRFIAQVRFNKDNKLQLIVDHPSIKNIIPANTHKKVTETLESGDWVVAQLKTHPLRDDRFLFAQVTQFICKADDNFAPWWVTLARHEQPREPVANEKSYELHDELDREDLTSLYFTTIDSPSTQDMDDALYIEPIKQGEVQTGWRLVVAIADPTAYIPENSNLEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGYIETDLAGNITGDTRFVSAWVESKAKLAYDNVSDYLEQVENAWQPESAETKQQIDWLHQFTLARIEWRRNNALLFKESGDYSFELNEDGSVRDIHVEYRRIANQMIEESMIIANICCAKFLADNAKTGVFNTHAGFDPKNLESAQKFLLDTLSTDENRDALTAFYAPEKLATLEGYCEMRRSIDEFPEKFLELRLRRYLTFAEFKSEVAPHLGLGISHYATWTSPIRKYGDMVNHRLIKQVLLGKQAKTVEEGILVRLQEARRQNRLVERDIADWLYARYLFPMVEQAVEFDCEIADVSRGGVRAKVIANGAQIFVPFSTLHDKKEEMEFRPEEIALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
What is the function of this protein?
Involved in mRNA degradation.  Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.
What are the official names of this protein?
Exoribonuclease 2, Exoribonuclease II, RNase II, Ribonuclease II.
What is the protein family that this protein belongs to?
Belongs to the RNR ribonuclease family. RNase II subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YAII_ECOLU
Sequence: MTIWVDADACPNVIKEILYRAAERMQLPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG
What are the official names of this protein?
UPF0178 protein YaiI.
What is the protein family that this protein belongs to?
Belongs to the UPF0178 family.
Protein: SODF_SACS2
Sequence: MTLQIQFKKYELPPLPYKIDALEPYISKDIIDVHYNGHHKGYVNGANSLLERLEKVVKGDLQTGQYDIQGIIRGLTFNINGHKLHALYWENMAPSGKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYDTESGNLQIMTFENHFQNHIAEIPIILILDEFEHAYYLQYKNKRADYVNAWWNVVNWDAAEKKLQKYLTK
What is the function of this protein?
Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
What are the official names of this protein?
Superoxide dismutase [Fe].
What is the protein family that this protein belongs to?
Belongs to the iron/manganese superoxide dismutase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: F16PA_PHOLL
Sequence: MKTLGEFIVEKQQDFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGTSGVSNVQGEVQMKLDLYANEKLKAALKARGEVAGIASEEEDDIVIFEGDRAENAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRITPIGQPVTEKDFLQPGHRQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLSHEKVQFPPNGNMYSINEGNYIKFPMGVKKYIKYCQEQDEATQRPYTTRYIGSLVADFHRNLLKGGIYIYPSTASHPSGKLRLLYECNPMAFLAEQAGGKASDGANRILDITPSKLHQRVPFFVGSKSMVEKAESFMAEFPDE
What are the official names of this protein?
Fructose-1,6-bisphosphatase class 1, FBPase class 1, D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1.
What is the protein family that this protein belongs to?
Belongs to the FBPase class 1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RASN_PIG
Sequence: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
What is the function of this protein?
Ras proteins bind GDP/GTP and possess intrinsic GTPase activity.
What are the official names of this protein?
GTPase NRas, Transforming protein N-Ras.
What is the protein family that this protein belongs to?
Belongs to the small GTPase superfamily. Ras family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor; Cytoplasmic side. Golgi apparatus membrane; Lipid-anchor. Note=Shuttles between the plasma membrane and the Golgi apparatus.
Protein: COX6C_PLEDO
Sequence: MASEVLVKPQMRGLLARRLRIHMVGAFLVSLGVAALYKFGVAEPRKKAYADFYKNYSAEKDFEEMKKAGLFRSIK
What is the function of this protein?
Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water.  Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)).  The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
What are the official names of this protein?
Cytochrome c oxidase subunit 6C, Cytochrome c oxidase polypeptide VIc.
What is the protein family that this protein belongs to?
Belongs to the cytochrome c oxidase subunit 6c family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Single-pass membrane protein.
Protein: TIP42_ORYSJ
Sequence: MPLLPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLPQE
What is the function of this protein?
Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.  May be involved in transport from the vacuolar compartment to the cytoplasm (By similarity).
What are the official names of this protein?
Probable aquaporin TIP4-2, Tonoplast intrinsic protein 4-2, OsTIP4;2.
What is the protein family that this protein belongs to?
Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily.
What are the subcellular locations of this protein?
Vacuole membrane; Multi-pass membrane protein. Note=Tonoplast.
Protein: ATG42_CAEEL
Sequence: MNNIPDDFKKIASSSRLPRKYCSSESSLSDDDGHEIEHVLKHGAPEEALTPDTERMVVLGQDVVQSAPASLVPGGNLSWMSKIKSAGASMMGSIRPSSSSQDVHSTGEIEKHSKKKWKARLWSTWNNIKYSSTWMSDRSDEYGGENDVVFLGRRYSTSVDESGLRSGFENFCSDYYSRLWITYRTDFPALLDTDTTTDCGWGCMIRTTQMMVAQAIMVNRFGRDWRFTRRKRSHVAAHGDEDDFDREKIQEWMILKLFEDKPTAPLGIHKMVGIAAMGKGKKAVGSWYSPSEAVFIMKKALTESSSPLTGNTAMLLSIDGRVHIRDIEVETKNWMKKLILVIVVRLGAAELNPIYVPHLMRLFAMESCLGITGGRPDHSSWFVGYYGDQIIYLDPHVAHEYIPIDINPNTNVVDSDSKKAKKCPEKSYHCRLLSKMHFFDMDPSCALCFQFESREQFDNDMRQLNLSQFIDIDQGEEHGMKRVRDPMFSVVYGERRQPPSYEREVSETEQAQADKHGFEML
What is the function of this protein?
Cysteine protease required for autophagy (PubMed:22767594, PubMed:30880001).  Cleaves the C-terminal amino acid of ATG8 family proteins lgg-1, to reveal a C-terminal glycine (Probable).  Exposure of the glycine at the C-terminus is essential for ATG8 proteins conjugation to phosphatidylethanolamine (PE) and insertion to membranes, which is necessary for autophagy (Probable).  Its cleavage activity is functionally redundant to atg-4. 1, but it cleaves lgg-1 precursors less efficiently than atg-4. 1 (Probable).  In contrast to atg-4. 1, plays a more significant role in the later phases of autophagy and in addition has a role in autophagosome maturation (PubMed:30880001).  Acts redundantly with atg-4. 1 to promote the lgg-1 delipidation to release the protein from membranes, which facilitates multiple events during macroautophagy (PubMed:30880001).  Regulates the accumulation of autophagic structures in neurons and is specifically, required for the maturation and elimination of autophagosomes from the synaptic region of AIY interneurons (PubMed:30880001).
What are the official names of this protein?
Cysteine protease atg-4.2, Autophagy-related protein 4 homolog 2.
What is the protein family that this protein belongs to?
Belongs to the peptidase C54 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DIM1_CAEEL
Sequence: MGKTSKVKKTKAGSSTGNVQSLPFNTDKGQHILKNPGVVNAIVEKSALKATDTVLEVGPGTGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMGTPLQNKLQVNGGDVMKMEWPFFDVCVANLPYQISSPFVQKLLLHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAVVRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLMAIFRLSNVIEVIEDNFRKVCSFKNKPIPKDLNMKKVIEETLTASGYGESRARKMRVEDFLALLLAFNKADIHFLS
What is the function of this protein?
Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle.  Involved in the pre-rRNA processing steps leading to small-subunit rRNA production independently of its RNA-modifying catalytic activity.  Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit.  During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome.
What are the official names of this protein?
Probable dimethyladenosine transferase, Probable 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase, Probable 18S rRNA dimethylase, Probable S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
What are the subcellular locations of this protein?
Nucleus, nucleolus.
Protein: PSRP_SALPC
Sequence: MDNVVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYQQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPGNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLTLPTSLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPCLNSTNYSVEEIATKILDIMGLNRRMY
What is the function of this protein?
Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
What are the official names of this protein?
Phosphoenolpyruvate synthase regulatory protein, PEP synthase regulatory protein, PSRP, Pyruvate, water dikinase regulatory protein.
What is the protein family that this protein belongs to?
Belongs to the pyruvate, phosphate/water dikinase regulatory protein family. PSRP subfamily.
Protein: NU1C_ILLOL
Sequence: MIIDTTEVQAINSFSRSESSKEFYGLIWLLVPIFTPVSGILIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSVGPSIAVISILLSYSVIPFGYRLIIADISIGVFLWIAISSIAPIGLLMSGYGSNNKYSFSGGLRAAAQSISYEIPLTPCVLSISLRLSNSSSTVDIVEAQSKYGFCGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKSGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYISIPELFGINKTGGVFGSTIGILITLAKAYLFLFVPITTRWTLPRMRMDQLLNLGWKFLLPIALGNLLLTTSSQLLSF
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic, NAD(P)H dehydrogenase subunit 1, NDH subunit 1, NADH-plastoquinone oxidoreductase subunit 1.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 1 family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: DXR_MYCBP
Sequence: MTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAARPGQIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHAADQWAVEPATVDDVLDAQRWARERAQRAVSGMASVAIASTAKPGAAGRHASTLERS
What is the function of this protein?
Catalyzes the NADPH-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).
What are the official names of this protein?
1-deoxy-D-xylulose 5-phosphate reductoisomerase, DXP reductoisomerase, 1-deoxyxylulose-5-phosphate reductoisomerase, 2-C-methyl-D-erythritol 4-phosphate synthase.
What is the protein family that this protein belongs to?
Belongs to the DXR family.
Protein: ERA_MYCSJ
Sequence: MSEFRSGFVCFVGRPNTGKSTLTNALVGTKVAITSNRPQTTRHTIRGIVHRDEFQIILVDTPGLHRPRTLLGQRLNDLVKTTYSEVDVIGLCIPADEAIGPGDRWIHEQIRAVAPRTTLVVIVTKIDKVPKDRVAAQLMAVSELIGPDAEIVPVSATTGEQLDVLTDVLAGKLPPGPAFYPDGELTDEPEETLMAELIREAALEGVRDELPHSLAVVIDEVSPREDRDDLIDVHAILYVERDSQKGIVIGKGGARLREVGTAARLQIEKLLGTKVYLDLRVKIAKNWQRDPKQLGRLGF
What is the function of this protein?
Exhibits GTPase activity.  Binds RNA but is probably not involved in ribosome assembly in mycobacteria.
What are the official names of this protein?
GTPase Era.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
What are the subcellular locations of this protein?
Cytoplasm. Cell membrane; Peripheral membrane protein.
Protein: GLAH_ECOLI
Sequence: MNALTAVQNNAVDSGQDYSGFTLTPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVAKILDDLCANQLQPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYASNHYQTHQ
What is the function of this protein?
Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG) in the stationary phase of E. coli.  Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.  Other dicarboxylic acids (oxalate, malonate, succinate, adipate, and pimelate) are not substrates for this enzyme.
What are the official names of this protein?
Glutarate 2-hydroxylase, G-2-H, Carbon starvation induced protein D.
What is the protein family that this protein belongs to?
Belongs to the glutarate hydroxylase family.
Protein: YKUT_BACSU
Sequence: MDFIKQYDWAGLITNAGVLLIKLAIMILLYFIVRSLGMKIIKHLFAKFEEQNSLSIGRAHTLRSLTLNIFAYTLIFIFFVMVLDLFHYDPSALLAGAGIVGLAVGFGAQGLVSDIVTGFFILLEKQLDVGDYITVSTFDGIVEQVGLRTTQIRSFDGTLHYIPNRNITNVSNHSRGTMQALVDIKVPAERNIDEMIHILQQVCDETAAALPQIKEGPNVIGIQELGTSEIVIRVIAKTENMEQWRVERVLRKEIKNAFDRAFPKETE
What is the function of this protein?
May play a role in resistance to osmotic downshock.
What are the official names of this protein?
Uncharacterized MscS family protein YkuT.
What is the protein family that this protein belongs to?
Belongs to the MscS (TC 1.A.23) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RUAS1_HUMAN
Sequence: MEPGGSENAAALWISEGGRGPGRGPGPEWTSRSLLPQSGPALQPTPYSQRKGPRETHPDALKGGGGWGWGNTQSLSGECRKGVGAGEEKDGAAVSLSTPHLLAASAGLQPAPSPLGTAVCPFSPHSSPSFSHHRTLSLFISPAPLSCPAPRAQVHRSTPMGRALLTRVLLEPLRPWACPRLPRSPPGGAQSGRGGALAQPTLRCAAAPLRAWAWRSSDPPPAFSVFCHPPRGFDIS
What are the official names of this protein?
Putative uncharacterized protein RUSC1-AS1, RUSC1 antisense RNA 1, RUSC1 antisense gene protein 1.