PharMolix/UniProtQA huggingface dataset:
Protein: ATPA_BURVG
Sequence: MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELVGRVVDALGNPIDGKGPVNAKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGKTAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQYLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDEATRKQLERGRRVTELLKQPQYQPLQVWELAVSLYAANNGYLDDLDVKQVLSFEKGLRDNLKTSHADLIKRIEDTKDLSKDDEGALRAAIESFKKSGAY
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RS2_MYCPU
Sequence: MAEKTLRKSNEDKQVKTENIYKIIPNSKFLEAGVYFGHRTQQWNPKMKKFIHSKRRGIHILDVSKTSKALEWAYKIINAAAAKGATFIFVGTKKHAKEIVKEQAQRTNSYYVTERWLGGTLTNSKTIFSRVRRLFDLEKMAENNFEGYTKKEGIEFKKELSKLQKNFEGIREMKTQPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLILTVLADAIVNAKGGKDLFAYQDEANIILPEDKKIDSPQRSHFNNTRFDQSSSREHRDSWRRNSQNTSQNQEQSQRPYKRTYNKDSRETLDKKTKEEVK
What are the official names of this protein?
30S ribosomal protein S2.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS2 family.
Protein: LPXH_VIBCH
Sequence: MHTLFISDLHLSPKHPDITASFIQFMREEAIKADALYVLGDLFDFWIGDDDPTTFAEQIKSEFRQLTQQGVPCYFTKGNRDFLVGKRFAQQTGVQLLPDEAVIDLYGQKAVVLHGDTLCTQDTRYLEFRAKVHQPWLQRLFGLLPFALKQKLVRKIQSDIRDDKQHKSMMIMDVTPSEVIAVMHRYNVDLMIHGHTHRPAIHSIQTDDQTLKTRIVLGDWYSQSSILVYSKQLATHYCRDHS
What is the function of this protein?
Hydrolyzes the pyrophosphate bond of UDP-2,3-diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom.  Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
What are the official names of this protein?
UDP-2,3-diacylglucosamine hydrolase, UDP-2,3-diacylglucosamine diphosphatase.
What is the protein family that this protein belongs to?
Belongs to the LpxH family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: PURA_THIDA
Sequence: MAAKNVVVIGTQWGDEGKGKIVDWLTDRAQGVVRFQGGHNAGHTLVVGGKKTVLHLIPSGILRDNVTCYIGNGVVLAPDALLKEMDMLEAAGVDVASRLKISEACPLIMPHHVALDQAREIAKGAGKIGTTGRGIGPAYEDKVARRALRLQDLFHRERFAAKLGEVLDHHNFMLKNYYKVEVVSFNQTLDGMMAMAERLKPMVADVPRSLYEANKAGGNLLFEGAQGTLLDIDHGTYPFVTSSNCTAGGAATGSGVGPSAMHYVLGITKAYTTRVGSGPFPTELFDDVGQYLGEKGHEFGATTGRQRRCGWFDAAALKRSIQINGVSGLCVTKLDVLDGLETVRVCVGYKIDGEACDILPVGAESITNVEPIYEDLPGWSDTTVGVQMFDKLPQKAQTYLKRMEELCEVPVDVVSTGPDRVETIVRRHPYEA
What is the function of this protein?
Plays an important role in the de novo pathway of purine nucleotide biosynthesis.  Catalyzes the first committed step in the biosynthesis of AMP from IMP.
What are the official names of this protein?
Adenylosuccinate synthetase, AMPSase, AdSS, IMP--aspartate ligase.
What is the protein family that this protein belongs to?
Belongs to the adenylosuccinate synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MRAZ_ANAD2
Sequence: MFFGTFNHAIDAKGRTSLPAKFREALAAAGEPRIVLMQYPHWRAVQALPQSVWNELVKKVMEASPLDARWQRNVLKFVSSAHEVDLDVHGRVLVPPPLREWAGLQKDVVWVGMGRTIHLYDRAAYDEQMSAEIPADQVVDFFRTA
What are the official names of this protein?
Transcriptional regulator MraZ.
What is the protein family that this protein belongs to?
Belongs to the MraZ family.
What are the subcellular locations of this protein?
Cytoplasm, nucleoid.
Protein: SIR5_BOVIN
Sequence: MPPLWIIRNRLFSQLYCGLKSPVSTQTKICLTMARPSSNMADFRKCFAKAKHIVVISGAGISAESGVPTFRGAGGYWRKWKAQDLATPQAFARNPSQVWEFYHYRREVVQSTEPNAGHLAIAECQARLHRQGRQVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPDPQTQDAGIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDKELALCDLCLVVGTSSVVYPAAMFAPQVSARGVPVAEFNMETTPATERFRFHFQGPCGTTLPEALAPHETETVS
What is the function of this protein?
NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins.  Activates CPS1 and contributes to the regulation of blood ammonia levels during prolonged fasting: acts by mediating desuccinylation and deglutarylation of CPS1, thereby increasing CPS1 activity in response to elevated NAD levels during fasting.  Activates SOD1 by mediating its desuccinylation, leading to reduced reactive oxygen species.  Activates SHMT2 by mediating its desuccinylation.  Modulates ketogenesis through the desuccinylation and activation of HMGCS2.  Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.  Can deacetylate cytochrome c (CYCS) and a number of other proteins in vitro such as UOX.
What are the official names of this protein?
NAD-dependent protein deacylase sirtuin-5, mitochondrial, Regulatory protein SIR2 homolog 5, SIR2-like protein 5.
What is the protein family that this protein belongs to?
Belongs to the sirtuin family. Class III subfamily.
What are the subcellular locations of this protein?
Mitochondrion. Cytoplasm, cytosol. Nucleus. Note=Mainly mitochondrial. Also present extramitochondrially, with a fraction present in the cytosol and very small amounts also detected in the nucleus.
Protein: VME1_SARS2
Sequence: MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQ
What is the function of this protein?
Component of the viral envelope that plays a central role in virus morphogenesis and assembly via its interactions with other viral proteins (By similarity).  Regulates the localization of S protein at cis-Golgi, the place of virus budding (PubMed:33229438).  May act by binding cytoplasmic c-terminus of S (PubMed:33229438).
What are the official names of this protein?
Membrane protein, M, E1 glycoprotein, Matrix glycoprotein, Membrane glycoprotein.
What is the protein family that this protein belongs to?
Belongs to the betacoronaviruses M protein family.
What are the subcellular locations of this protein?
Virion membrane; Multi-pass membrane protein. Host Golgi apparatus membrane; Multi-pass membrane protein. Host membrane; Multi-pass membrane protein. Note=Largely embedded in the lipid bilayer.
Protein: ARX1_ASHGO
Sequence: MALAISSEDTQVLLKDKNVLHESNVDKYRTAGQITQTALRFLAGLINDSYHHRTRATPLSVAELCMLTDSFVERCVRQAFANKANERGIAHPTTIDVDEITQGWAPETDDAANMERWNRDRQANSGSCQGARSAISGFLHEGDVVKLTVGCHIDGYTAQVSHTMVVYPTTRREADQALVPAGPLLGAKADAVAAATIAKESVTSLLACAQATEKLPAAFGERQVTGTLIRRVVDAVARSYNCAVVPGSRVRRVRRFLAGQNEGVVAERDIKGVHWTEAHQEAALLASSVETTDVTRVDASNKSANDSAVATDDFVVVSGEAYLIDLKIAPLKDLPRGLLTLQTVDHFSGKSHRKDELLARASLICRDFAKQHVLKLKSSRQLLHKLDSKGVYPTKLAHLTAAFPLDPESPDWDAVSKELKHLRLGLAEVTNNYLANEKPVQLCRLVPWDVILKAVNPTGKHGTDASNPTLPGYEIPLPQLGISSLRLKSLLKDSLPVPVARESITVLLCPAEVTSTGSPELLKLTGGPTTTPSWIHSDYELNVSDPVVQGILQLAELSKDKRFGLAIRETQPWKQKIPSAAAVTSADVEMA
What is the function of this protein?
Probable metalloprotease involved in proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit.  Accompanies the pre-60S particles to the cytoplasm (By similarity).
What are the official names of this protein?
Probable metalloprotease ARX1, Associated with ribosomal export complex protein 1.
What is the protein family that this protein belongs to?
Belongs to the peptidase M24 family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: QCR8_NEUCR
Sequence: MRPTQTMLGGGGGAPIGKHNHYLGGWGNFGGMKQRGIISYGISPNRQNPLAGTAHDAVFNTFRRVSSQFLYWAPSLVAGYYIMNWAIERNHYLNSKAGRAEFAGQEE
What is the function of this protein?
Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol.  In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c.
What are the official names of this protein?
Cytochrome b-c1 complex subunit 8, Complex III subunit 8, Complex III subunit VIII, Ubiquinol-cytochrome c reductase complex 11 kDa protein, Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C.
What is the protein family that this protein belongs to?
Belongs to the UQCRQ/QCR8 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Single-pass membrane protein.
Protein: FND10_RAT
Sequence: MRAPPLLLLLAACAPPSGAAVDPTPPGWEPAPDAPWCPYKVLSEGPEAGGGRLCFRSPVRGFRCQTPGCVTLASAGGSLRAHVLRNRSVLLQWRLAPAEARRVRVFALNCSWRGTYTRFPCDRVLLGASCRDYLLPDVHDSVRYRLCLQPLPLPLRAELAAAPPELAECVEFTAEPAAMQEIVVAMTAVGGSICVMLVVICLLVAYITENLMHPTFRRPSLRRQP
What are the official names of this protein?
Fibronectin type III domain-containing protein 10.
What are the subcellular locations of this protein?
Membrane; Single-pass type I membrane protein.
Protein: Y1568_STRPM
Sequence: MMNMQNMMKQAQKLQKQMEQKQADLAAMQFTGKSAQDLVTATFTGDKKLVGIDFKEAVVDPEDVETLQDMTTQAINDALTQIDEATKKTLGAFAGKLPF
What is the function of this protein?
Binds to DNA and alters its conformation.  May be involved in regulation of gene expression, nucleoid organization and DNA protection.
What are the official names of this protein?
Nucleoid-associated protein M28_Spy1568.
What is the protein family that this protein belongs to?
Belongs to the YbaB/EbfC family.
What are the subcellular locations of this protein?
Cytoplasm, nucleoid.
Protein: RS4_WOLWR
Sequence: MTTVITRKYRISRRLGVNLWGRAKDPVNKRKYPPGQHGILGFKKLSDFGKQFAAHKKFKFYYAISSKQLRRTFLDAYNRKGYTADNFIGILESRLSSVLYHSGLVPTIYSAKQLISHKHVTVNDKVVNISSYRVKPGDIIKIRERAAKIPVVVEAEQKQERKAPDYLEADSKEHSVKYLRSPQYSEVPYSADMEVNLVVEFYSR
What is the function of this protein?
With S5 and S12 plays an important role in translational accuracy.
What are the official names of this protein?
30S ribosomal protein S4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS4 family.
Protein: CPH_NEONM
Sequence: MAPISSTWSRLIRFVAIETSLVHIGEPIDATMDVGLARREGKTIQAYEIIGSGSALDLSAQVSKNVLTVRELLMPLSREEIKTVRCLGLNYPVHATEANVAVPKFPNLFYKPVTSLIGPDGLITIPSVVQPPKEHQSDYEAELVIVIGKAAKNVSEDEALDYVLGYTAANDISFRKHQLAVSQWSFSKGFGSLLLTIRMAQTHSGNINRFSRDQIFNVKKTISFLSQGTTLEPGSIILTGTPDGVGFVRNPPLYLKDGDEVMTWIGSGIGTLANTVQEEKTCFASGGHE
What is the function of this protein?
Caffeoylpyruvate hydrolase; part of the gene cluster that mediates the fungal bioluminescence cycle (PubMed:30478037, PubMed:28508049).  Involved in the recycling of oxyluciferin, a pyruvic acid adduct of caffeic acid, to caffeic acid (PubMed:30478037, PubMed:28508049).  The fungal bioluminescence cycle begins with the hispidin synthetase that catalyzes the formation of hispidin which is further hydroxylated by the hispidin-3-hydroxylase, yielding the fungal luciferin 3-hydroxyhispidin.  The luciferase then produces an endoperoxide as a high-energy intermediate with decomposition that yields oxyluciferin (also known as caffeoylpyruvate) and light emission.  Oxyluciferin can be recycled to caffeic acid by caffeoylpyruvate hydrolase (PubMed:30478037) (Probable).
What are the official names of this protein?
Caffeoylpyruvate hydrolase, CPH, Fungal bioluminescence cycle protein cph.
What is the protein family that this protein belongs to?
Belongs to the FAH family.
Protein: LUXS_DICNV
Sequence: MERKHMNVASFNLDHNAVKAPYVRLADKKIGSHGDVIYKYDIRVCQPNREQMLMPALHSLEHLLAELMRNHSDKILDISPMGCQTGFYISLLNEPDYQVMLHLLETTLNDILAAEAVPACCEEQCGFAANHSLSGAQEIARYLLAHRNKWEQVF
What is the function of this protein?
Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment.  The regulation of gene expression in response to changes in cell density is called quorum sensing.  Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).
What are the official names of this protein?
S-ribosylhomocysteine lyase, AI-2 synthesis protein, Autoinducer-2 production protein LuxS.
What is the protein family that this protein belongs to?
Belongs to the LuxS family.
Protein: UREG_CORU7
Sequence: MAPIKIGIGGPVGSGKTELIERITRALDGEIEMAAITNDIYTLEDAKILARNSVLDEDRIIGVETGGCPHTAIREDTSMNDAAYEEIVKRHPNLDIVFVESGGDNLSATFSPELVDFSIYIIDVAQGEKIPRKAGQGMIKSDLFVINKTDLAPYVGADLSVMEADSKNFRGEKPFVMTNLKTDEGLDGVLRWIREDVLMSDLAES
What is the function of this protein?
Facilitates the functional incorporation of the urease nickel metallocenter.  This process requires GTP hydrolysis, probably effectuated by UreG.
What are the official names of this protein?
Urease accessory protein UreG.
What is the protein family that this protein belongs to?
Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS19_ECO27
Sequence: MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK
What is the function of this protein?
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S19.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
Protein: DXS_ACTP2
Sequence: MQNKYPLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQTPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISAGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPTIKNFMKKSEEHMKGVISPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELKGPQFLHIRTKKGKGYEPAENDPIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRMNTPTAVRYPRGNAQGVALAPMQALEVGKGKLIQQGQKVAILNFGPLLNEARIVAEKHNYTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIGKIRPLVMLGIPDFFVPQATQAESYADLGLDAAGIEQRIQAVVNQ
What is the function of this protein?
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).
What are the official names of this protein?
1-deoxy-D-xylulose-5-phosphate synthase, 1-deoxyxylulose-5-phosphate synthase, DXP synthase, DXPS.
What is the protein family that this protein belongs to?
Belongs to the transketolase family. DXPS subfamily.
Protein: RIMP_BORPD
Sequence: MADLYALTQQALAGMDVELVDVERAALGLLRVTIDKAGGVRIEDCEQVSRQLSRVYEVENIDYKRLEVGSPGVDRPLRTEAELRRFAGERIEIKLRQPLDGRKVFSGILSAPANDGAAADAQPAVFGLEFEAKKDDIQVLNFTLGDVERAKLDPVLDFKGKKR
What is the function of this protein?
Required for maturation of 30S ribosomal subunits.
What are the official names of this protein?
Ribosome maturation factor RimP.
What is the protein family that this protein belongs to?
Belongs to the RimP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SHLB1_HUMAN
Sequence: MNIMDFNVKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKIWTEKIMKQTEVLLQPNPNARIEEFVYEKLDRKAPSRINNPELLGQYMIDAGTEFGPGTAYGNALIKCGETQKRIGTADRELIQTSALNFLTPLRNFIEGDYKTIAKERKLLQNKRLDLDAAKTRLKKAKAAETRNSSEQELRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYQYMLDLQKQLGSFPSNYLSNNNQTSVTPVPSVLPNAIGSSAMASTSGLVITSPSNLSDLKECSGSRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLN
What is the function of this protein?
May be required for normal outer mitochondrial membrane dynamics (PubMed:15452144).  Required for coatomer-mediated retrograde transport in certain cells (By similarity).  May recruit other proteins to membranes with high curvature.  May promote membrane fusion (PubMed:11604418).  Involved in activation of caspase-dependent apoptosis by promoting BAX/BAK1 activation (PubMed:16227588).  Isoform 1 acts proapoptotic in fibroblasts (By similarity).  Involved in caspase-independent apoptosis during nutrition starvation and involved in the regulation of autophagy.  Activates lipid kinase activity of PIK3C3 during autophagy probably by associating with the PI3K complex II (PI3KC3-C2) (PubMed:17891140).  Associated with PI3KC3-C2 during autophagy may regulate the trafficking of ATG9A from the Golgi complex to the peripheral cytoplasm for the formation of autophagosomes by inducing Golgi membrane tubulation and fragmentation (PubMed:21068542).  Involved in regulation of degradative endocytic trafficking and cytokinesis, probably in the context of PI3KC3-C2 (PubMed:20643123).  Isoform 2 acts antiapoptotic in neuronal cells; involved in maintenance of mitochondrial morphology and promotes neuronal viability (By similarity).
What are the official names of this protein?
Endophilin-B1, Bax-interacting factor 1, Bif-1, SH3 domain-containing GRB2-like protein B1.
What is the protein family that this protein belongs to?
Belongs to the endophilin family.
What are the subcellular locations of this protein?
Cytoplasm. Golgi apparatus membrane; Peripheral membrane protein. Mitochondrion outer membrane; Peripheral membrane protein. Cytoplasmic vesicle, autophagosome membrane. Midbody. Note=Association with the Golgi apparatus depends on the cell type (By similarity). Following starvation colocalizes with ATG5 and LC3 autophagy-related protein(s)on autophagosomal membranes (PubMed:17891140).
Protein: RS7_STRAW
Sequence: MPRKGPAPKRPVIIDPVYGSPLVTSLINKVLLNGKRSTAERIVYGAMEGLREKTGNDPIITLKRALENIKPTLEVKSRRVGGATYQVPIEVKPGRANTLALRWLVGYSRARREKTMTERLLNELLDASNGLGAAVKKREDTHKMAESNKAFAHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: DPO4_SERP5
Sequence: MRKIIHVDMDCFFAAVEMRDDPSLRDIPLAIGGSADRRGVISTANYPARRYGVHSAMSTAMALKLCPHLKLLPGRMAAYKEASQHIREIFARYTPLIEPLSLDEAYLDVTDCSQCNGSATLIAEQIRQTISDELNLTASAGIAPIKFLAKIASELNKPNGQYVITPAQVPAFLQQLPLSKIPGVGKVTAKRLEEVGLITCADVQQYDLAALLKRFGKFGRVLWERCQGIDLREVSPERLRKSVGVERTLAEDIHDWEDCEALIVDKLYPELELRLRKVKPDLHIARQGVKLKFQDFQQTTQEHVWPVLNKDDLINVARQVWRERREGRGVRLVGLHVTLLDPQLERQLLLPWE
What is the function of this protein?
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis.  Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends.  These misaligned primers can be extended by PolIV.  Exhibits no 3'-5' exonuclease (proofreading) activity.  May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
What are the official names of this protein?
DNA polymerase IV, Pol IV.
What is the protein family that this protein belongs to?
Belongs to the DNA polymerase type-Y family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL34_CHLPD
Sequence: MKRTYQPRNRKRRNKHGFRQRMSTKNGRRVLASRRAKGRHSLSVSSAMGTAGQ
What are the official names of this protein?
50S ribosomal protein L34.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL34 family.
Protein: NU6C_OENAR
Sequence: MDLPGPIHDFLLVFLGSGLIVGGLGVVLLTNPIFSAFSLGLVLVCISLFFSLSNSYFVAAAQLLIYVGAINVLILFAVMFMNGSEYSKDLTLWTVGDGITSLVCTSIFISLITTILDTSWYGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFELISIILLVSLIGAIAVARQ
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic, NAD(P)H dehydrogenase subunit 6, NADH-plastoquinone oxidoreductase subunit 6.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 6 family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: RECO_CLONN
Sequence: MGDGFLSIFKTKALILKTQDYKENDKLVWLFTEKIGKVCAIAKGAKKSKSKFIASTQTFCFGEYVLYRGKSLYSINEVEIIDSFQSLLSDMDTITYGSYFCELILIALEQEQSDRELFKDFIKSFYFLKNQAMDLEILARTFELKLLKATGYGFDFEKCCICGKRINKTNYLSIQYYGGVCDNCEKTGGFKISYAAYGVLKFLYKTSIENAHIISVSNEIKEEVYKVLDMFISQSYSKKPKSLEIFNYLKRSEYNE
What is the function of this protein?
Involved in DNA repair and RecF pathway recombination.
What are the official names of this protein?
DNA repair protein RecO, Recombination protein O.
What is the protein family that this protein belongs to?
Belongs to the RecO family.
Protein: E4PD_SHESR
Sequence: MIRVAINGYGRIGRSILRALYESGKRQQIQIVAINELAKPEAIVHLTQYDTTHGRFQPRVKLVDDQMLIGDDVIKILHEPDPAKLPWREMDIDIVYEATGAILDRNSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNQDLLRAEHTVVSNASCTTNCIVPVIDVLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLDTSLAMIAAKQS
What is the function of this protein?
Catalyzes the NAD-dependent conversion of D-erythrose 4-phosphate to 4-phosphoerythronate.
What are the official names of this protein?
D-erythrose-4-phosphate dehydrogenase, E4PDH.
What is the protein family that this protein belongs to?
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. Epd subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CCS_RAT
Sequence: MASKSGDGGTMCALEFTVQMSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQAVLKGMGSSQLKNLGAAVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKVWDVIGRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLACGIIARSAGLFQNPKQICSCDGLTIWEERGRPIAGQGRKDSAQPPAHL
What is the function of this protein?
Delivers copper to copper zinc superoxide dismutase (SOD1).
What are the official names of this protein?
Copper chaperone for superoxide dismutase, Superoxide dismutase copper chaperone.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the Cu-Zn superoxide dismutase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PROF2_PHYPO
Sequence: MSWQTYVDEQLVGTGQLDGAIIIGLDGNSWASKNLTLKAGEGQAIAALFKTPANVFASGITINGIKYMGIKGDSRSIYGKKGATGVATVITGQCILIGYYNEKQQPGNAALVVEKLADYLIENGY
What is the function of this protein?
Binds to actin and affects the structure of the cytoskeleton.  At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.  By binding to PIP2, it inhibits the formation of IP3 and DG.
What are the official names of this protein?
Profilin-P.
What is the protein family that this protein belongs to?
Belongs to the profilin family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.