PharMolix/UniProtQA huggingface dataset:
Protein: OTC_CHLTE
Sequence: MSQDNKGNGSKKRDFLGFTGLDAAKIIELFDYSLFIKQQRETNRNSDEFRPIRHKTVAMIFNKPSLRTRVSFELGVYELGGHAISLEGKSIGVGERESIEDIARLLSRYNDAIVARLHEHEIIETLAKHADIPVINALTDLSHPCQVLADAFTLYEKGLWRDDIKVVFVGDGNNVANSWIELAGILPFHFVLACPEGYLPDETLLKQARSNAKGTIEILHDPMEAAKQADVLYTDVWTSMGQEEEMAERLKAFAPFQINAKMVAEAKPSAVIMHCMPAHRGQEISAEVMDGPQSIIIDEAENRLHVQKALMVKLMNHDVYRKFHLTHRLHRAANRLKA
What is the function of this protein?
Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
What are the official names of this protein?
Ornithine carbamoyltransferase, OTCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: QUEA_SALPA
Sequence: MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDDESIHATMTARHGALFEVEFNDPRPVLDILNAIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFITYNPRAISERP
What is the function of this protein?
Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
What are the official names of this protein?
S-adenosylmethionine:tRNA ribosyltransferase-isomerase, Queuosine biosynthesis protein QueA.
What is the protein family that this protein belongs to?
Belongs to the QueA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SPED_SALTY
Sequence: MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPIDPKLIDQTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDVNGMKHFIDHEINSIQNFMSEDMKSLYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTETERQEITAALWKEMREIYYGRNISAV
What is the function of this protein?
Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
What are the official names of this protein?
S-adenosylmethionine decarboxylase proenzyme, AdoMetDC, SAMDC.
What is the protein family that this protein belongs to?
Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.
Protein: YGHW_ECOL6
Sequence: MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN
What are the official names of this protein?
Uncharacterized protein YghW.
Protein: CDPKJ_ARATH
Sequence: MGCLCINLKKKVKKPTPDISGEQNTEVKSREITPKEQPRQRQPAPRAKFQIVVQPHKLPLPLPQPQEKQKLINHQKQSTLQQPEPILGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVFIEEGKVYEDIVGSAYYVAPEVLKRNYGKAIDIWSAGVILYILLCGNPPFWAETDKGIFEEILRGEIDFESEPWPSISESAKDLVRNMLKYDPKKRFTAAQVLEHPWIREGGEASDKPIDSAVLSRMKQLRAMNKLKKLAFKFIAQNLKEEELKGLKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAMKEYNMGDDIMIKEIISEVDADNDGSINYQEFCNMMKSCSQSHQSKLVQPN
What is the function of this protein?
May play a role in signal transduction pathways that involve calcium as a second messenger.
What are the official names of this protein?
Calcium-dependent protein kinase 19.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDPK subfamily.
What are the subcellular locations of this protein?
Membrane; Lipid-anchor.
Protein: HIS4_MYCTO
Sequence: MPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAVRD
What is the function of this protein?
Involved in both the histidine and tryptophan biosynthetic pathways.
What are the official names of this protein?
Phosphoribosyl isomerase A, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, N-(5'-phosphoribosyl)anthranilate isomerase, PRAI, Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SAHH2_ARATH
Sequence: MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSIIKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY
What is the function of this protein?
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine.
What are the official names of this protein?
Adenosylhomocysteinase 2, AdoHcyase 2, S-adenosyl-L-homocysteine hydrolase 1, SAH hydrolase 2.
What is the protein family that this protein belongs to?
Belongs to the adenosylhomocysteinase family.
Protein: COAW_STAHJ
Sequence: MKVGIDAGGTLIKIVQESQQGRSYETKLTTNISEVIAWLNANTFESISLTGGNAGVIAENLNVDATIFVEFDASSKGLGMLLKEQGHHIDEYIFANVGTGTSLHYFDGKQQRRVGGVGTGGGMIQGLGYLLSQITDYEALTNLAQSGDRDTIDLKVKHIYKDTEPPIPGELTAANFGNVLHNLDVDFSPANKLASVVGVVGEVITTMAITVARENKTENVVYIGSSFNNNPLLREVIEDYTVLRGFKPYYIENGAFSGALGAIYLN
What is the function of this protein?
Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
What are the official names of this protein?
Type II pantothenate kinase, PanK-II, Pantothenic acid kinase.
What is the protein family that this protein belongs to?
Belongs to the type II pantothenate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMI_MYCTU
Sequence: MSSGRLLLGATPLGQPSDASPRLAAALATADVVAAEDTRRVRKLAKALDIRIGGRVVSLFDRVEALRVTALLDAINNGATVLVVSDAGTPVISDPGYRLVAACIDAGVSVTCLPGPSAVTTALVMSGLPAEKFCFEGFAPRKGAARRAWLAELAEERRTCVFFESPRRLAACLNDAVEQLGGARPAAICRELTKVHEEVVRGSLDELAIWAAGGVLGEITVVVAGAAPHAELSSLIAQVEEFVAAGIRVKDACSEVAAAHPGVRTRQLYDAVLQSRRETGGPAQP
What is the function of this protein?
Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase I, 16S rRNA 2'-O-ribose C1402 methyltransferase, rRNA (cytidine-2'-O-)-methyltransferase RsmI.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmI family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UP09_GINBI
Sequence: STDALSK
What are the official names of this protein?
Unknown protein 9.
Protein: AROB_PROMP
Sequence: MHKNKILVPLSNNSYEVIIKQGLINNIGEELIRIGINSNRKILIVSNKEISTLFGRKLLNNLKKNNFNAEIFNIKAGESHKNFASLSEIFNAAFEVGLDRNSLLIALGGGIVGDVTGFAAATWLRGIEYIQIPTTLLSMVDSSVGGKTAVNHPKGKNLIGAFYQPKAVFIDPETLITLPTREFKAGMAEVIKYGVIKDKSLFEYLENEKNRDKILNLENESLIKIINKSIKTKACIVSEDEKENGIRAILNYGHSFGHVIENLCGYGEYLHGEAISIGMKIAGDIATEKNLWSKEHSLRQDHLIESYGLPIQTPKIKKNDVMKILMGDKKVRNGKMRFILPIELGEVDIFNDINESQFLKYFN
What is the function of this protein?
Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
What are the official names of this protein?
3-dehydroquinate synthase, DHQS.
What is the protein family that this protein belongs to?
Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VSPBH_BOTAL
Sequence: MVLIRVLANLLILQLSYAQKASELVIGGDECNINEHRSLVVLFNSSGFLCAGTLINQEWVLTAANCDRKNIRIKLGMHSKNVTNEDEQTRVPKRSTFVSVAKTSHQTLGTRTSMLIRLKRPVNDSPHIAPLSLPSSPPSVGSVCRVMGWGTISPTKVSYPDVPHCANINLLDYEVCREAHGGLPATSRTLCAGILEGGKDSCQGDSGGPLICNGQFQGILSWGVHPCGQPHKPGVYTKVSDYSEWIQSIIAGNTDVTCPP
What is the function of this protein?
Thrombin-like snake venom serine protease that induces blood clotting in vitro, defibrinogenation in vivo (by intraperitoneal injection into mice), albuminolytic and fibrinogenolytic activities.  Preferentially cleaves the alpha chain of fibrinogen (FGA).  Causes hemolysis in the heart, causes apparent hyperemia and lymphocytic interstitial pneumonitis in the lung, causes necrosis and inflammatory infiltrate in the liver, and causes glomerular congestion in the kidney.  Also provokes a drastic myonecrosis.
What are the official names of this protein?
Thrombin-like enzyme bhalternin, SVTLE, Fibrinogen-clotting enzyme, Snake venom serine protease, SVSP.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1 family. Snake venom subfamily.
Protein: ERPA_BURO0
Sequence: MNAVTETAATTTDMPLPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNATTTCGCGSSFSV
What is the function of this protein?
Required for insertion of 4Fe-4S clusters.
What are the official names of this protein?
Putative iron-sulfur cluster insertion protein ErpA.
What is the protein family that this protein belongs to?
Belongs to the HesB/IscA family.
Protein: KHSE_ALIFM
Sequence: MSVVVYAPASIGNVSVGFDVLGAAVSPIDGTLLGDRVLVELGSEAFTLATAGSFVDKLPENPKDNIVYDCWCVFSRELNKKNVALKNVHMILEKNMPIGSGLGSSACSIVAALDALNQFHDNPLNDVELLALMGEMEGQISGGIHYDNVAPCYLGGLQLMVEELGIISQEVPCFDEWYWVMAYPGIKVSTAEAREILPSQYRRQDVIAHGRNLAGFIHACYSKQPELAAKMIKDVVAEPYRERLLPNFAKAREYAASAGALTTGISGSGPTLFSICTDKDVADRVSRWLQENYVQNNEGFVHVCRLDKQGSQVTGSKL
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
What are the official names of this protein?
Homoserine kinase, HK, HSK.
What is the protein family that this protein belongs to?
Belongs to the GHMP kinase family. Homoserine kinase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SSF1_YEAST
Sequence: MAKRRQKKRTHAQLTPEQEQGIPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAIKLKERKSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDIKKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSGEDDQDVNVEKVIVSMFQNIFPPLNPARTSLNSIKRVFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKEDISSLILDHDLGAYTSESEIEDDAIVRVVDNQDVKAKHSQSLKSQRTPVEKKDNKEREKETEEEDVEMEEPKPSENLQPTPRKKAIKLTELGPRLTLKLVKIEEGICSGKVLHHEFVQKSSEEIKALEKRHAAKMRLKEQRKKEQEENIAKKKAVKDAKKQRKLERRKARAAEGGEGQGKDDAMSDDESSSSDSEHYGSVPEDLDSDLFSEVE
What is the function of this protein?
Required for biogenesis of the 60S ribosomal subunit.
What are the official names of this protein?
Ribosome biogenesis protein SSF1.
What are the subcellular locations of this protein?
Nucleus, nucleolus.
Protein: RL16_PARL1
Sequence: MLQPKRTKFRKAHKGRIHGKAKGGMHLDFGAFGLKAQEPARITARQIEAARRAITRHMKRAGRVWIRIFPDVPVSSKPTEVRMGKGKGAPEYWAARVKPGRIMFEIDGVPLAVAEEAMRLGAAKLPIKTRFVARPGEQA
What is the function of this protein?
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.
What are the official names of this protein?
50S ribosomal protein L16.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL16 family.
Protein: RASL1_HUMAN
Sequence: MAKSSSLNVRVVEGRALPAKDVSGSSDPYCLVKVDDEVVARTATVWRSLGPFWGEEYTVHLPLDFHQLAFYVLDEDTVGHDDIIGKISLSREAITADPRGIDSWINLSRVDPDAEVQGEICLSVQMLEDGQGRCLRCHVLQARDLAPRDISGTSDPFARVFWGSQSLETSTIKKTRFPHWDEVLELREMPGAPSPLRVELWDWDMVGKNDFLGMVEFSPKTLQQKPPKGWFRLLPFPRAEEDSGGNLGALRVKVRLIEDRVLPSQCYQPLMELLMESVQGPAEEDTASPLALLEELTLGDCRQDLATKLVKLFLGRGLAGRFLDYLTRREVARTMDPNTLFRSNSLASKSMEQFMKLVGMPYLHEVLKPVISRVFEEKKYMELDPCKMDLGRTRRISFKGALSEEQMRETSLGLLTGYLGPIVDAIVGSVGRCPPAMRLAFKQLHRRVEERFPQAEHQDVKYLAISGFLFLRFFAPAILTPKLFDLRDQHADPQTSRSLLLLAKAVQSIGNLGQQLGQGKELWMAPLHPFLLQCVSRVRDFLDRLVDVDGDEAGVPARALFPPSAIVREGYLLKRKEEPAGLATRFAFKKRYVWLSGETLSFSKSPEWQMCHSIPVSHIRAVERVDEGAFQLPHVMQVVTQDGTGALHTTYLQCKNVNELNQWLSALRKASAPNPNKLAACHPGAFRSARWTCCLQAERSAAGCSRTHSAVTLGDWSDPLDPDAEAQTVYRQLLLGRDQLRLKLLEDSNMDTTLEADTGACPEVLARQRAATARLLEVLADLDRAHEEFQQQERGKAALGPLGP
What is the function of this protein?
Probable inhibitory regulator of the Ras-cyclic AMP pathway (PubMed:9751798).  Plays a role in dendrite formation by melanocytes (PubMed:23999003).
What are the official names of this protein?
RasGAP-activating-like protein 1, RAS protein activator like 1, Ras GTPase-activating-like protein.
Protein: SSPB_STAA8
Sequence: MNSSCKSRVFNIISIIMVSMLILSLGAFANNNKAKADSHSKQLEINVKSDKVPQKVKDLAQQQFAGYAKALDKQSNAKTGKYELGEAFKIYKFNGEEDNSYYYPVIKDGKIVYTLTLSPKNKDDLNKSKEDMNYSVKISNFIAKDLDQIKDKNSNITVLTDEKGFYFEEDGKVRLVKATPLPGNVKEKESAKTVSAKLKQELKNTVTPTKVEENEAIQEDQVQYENTLKNFKIREQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNCATFPNQMIEYGKSQGRDIHYQEGVPSYEQVDQLTKDNVGIMILAQSVSQNPNDPHLGHALAVVGNAKINDQEKLIYWNPWDTELSIQDADSSLLHLSFNRDYNWYGSMIGY
What is the function of this protein?
Cysteine protease that plays an important role in the inhibition of host innate immune response.  Degrades host elastin, fibrogen, fibronectin and kininogen.  Blocks phagocytosis of opsonised S. aureus by neutrophils and monocytes by inducing their death in a proteolytic activity-dependent manner.  Decreases surface expression of the 'don't eat me' signal CD31 on neutrophils.  Cleaves host galectin-3/LGALS3, thereby inhibiting the neutrophil-activating ability of the lectin.
What are the official names of this protein?
Staphopain B, Staphylococcal cysteine proteinase B, Staphylopain B.
What is the protein family that this protein belongs to?
Belongs to the peptidase C47 family.
What are the subcellular locations of this protein?
Secreted.
Protein: VIE3_MUHVS
Sequence: MEPAAPSCNMIMIADQASVNAHGRHLDENRVYPSDKVPAHVANKILESGTETVRCDLTLEDMLGDYEYDDPTEEEKILMDRIADHVGNDNSDMAIKHAAGPEMNIDIVTAAASMSGITTASHSALPIRRPNTPDFRRHSEKKAKKHKNKQRQRLDDVVAKLHKPSESEADEDFIFQQPQEEEYQEEQEPQVISSSPQHFDERSPSRSSSDHGGHSGGNSRDGQFYLSSGSEDEDDEDDERVDSGYRGSSRSEDSSRYRPHGGSHSSRSSIKSSGSGSSRHHHKRKAVPERHHPFTPPSAKRYAAAAPSSRYECPVRVDSSDSDDAPTMVQRGTLKIKSFRPPSSGSNSNKHSSSSGGSTSSSHKKQQQQQAPSKKPVMSSGSDKIRDMVDRTAGGYVAPNAHKKCREDKSRKYPARALEYKNLPFRPQSPQYLLGKAIQFCKEETVHDKFIMLFYTRSQDVRKAVDETRARMGMRPNLSISCPFMTEHTKPINHSRETIDRTSAACTAGTQAVWDMEERRGQKCVPRTSDYRSMIIQAANPPDFLGAVKTCLHLSQVFPKQVCMRLCSITGGLNPLPIYEETVSSYVNAQFEADDISHHEDESGEYESDCE
What is the function of this protein?
Strong transcriptional activator of the E1 promoter, shows an autoregulatory function by repression of the IE1/IE3 promoter.  The IE1 protein has some additive effect on the trans-activating properties of the IE3 protein.
What are the official names of this protein?
Immediate-early protein 3, IE3.
What are the subcellular locations of this protein?
Host nucleus.
Protein: G6PI_CHLPN
Sequence: MERKRFIDCDSTKILQELALNPLDLTAPGVLSAERIKKFSLLGGGFTFSFATERLDDAILAALISLAEERGLHESMLAMQQGQVVNYIEGFPSEMRPALHTATRAWVTDSSFTGEAEDIAVRSRVEAQRLKDFLTKVRSQFTTIVQIGIGGSELGPKALYRALRAYCPTDKHVHFISNIDPDNGAEVLDTIDCAKALVVVVSKSGTTIETAVNEAFFADYFAKKGLSFKDHFIAVTCEGSPMDDTGKYLEVFHLWESIGGRFSSTSMVGGVVLGFAYGFEVFLQLLQGASAMDQIALQPNARENLPMLSALISIWNRNFLGYPTEAVIPYSSGLEFFPAHLQQCCMESNGKSIVQDGRRVGFSTSPVIWGEPGTNGQHSFFQCLHQGTDIIPVEFIGFEKSQKGEDISFQGTTSSQKLFANMIAQAIALACGSENTNPNKNFDGNRPSSVLVSSQLNPYSLGELLSYYENKIVFQGFCWGINSFDQEGVSLGKALANRVLELLEGADASNFPEAASLLTLFNIKFR
What is the function of this protein?
Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.
What are the official names of this protein?
Glucose-6-phosphate isomerase, GPI, Phosphoglucose isomerase, PGI, Phosphohexose isomerase, PHI.
What is the protein family that this protein belongs to?
Belongs to the GPI family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS12_PELTS
Sequence: MPTISQLIRKGREEAVKKSAAPALKECPQKRGVCTRVYTTTPKKPNSALRKVARVRLTNGIEVTSYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDSAGVQNRNRGRSKYGTKRPKK
What is the function of this protein?
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone.  Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together.  The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.
Protein: ERPA_BUCA5
Sequence: MENAFKSHLQFTEKAIKKIKNLIEIEKNHDLKLRIYINGGGCSGFQYQFIFDTSINEDDIIITQSEVSLIIDPISLQYLYGGQIDYLENLEGSKFIVSNPNAKNTCGCGSSFSI
What is the function of this protein?
Required for insertion of 4Fe-4S clusters for at least IspG.
What are the official names of this protein?
Iron-sulfur cluster insertion protein ErpA.
What is the protein family that this protein belongs to?
Belongs to the HesB/IscA family.
Protein: RHMA_SHIDS
Sequence: MNALLTNPFKERLCKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLLPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDKILDVQGIDGVFIGPADLSASLGYPDNAGHLEVQRIIETSIRRIRDAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY
What is the function of this protein?
Catalyzes the reversible retro-aldol cleavage of 2-keto-3-deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde.
What are the official names of this protein?
2-keto-3-deoxy-L-rhamnonate aldolase, KDR aldolase, 2-dehydro-3-deoxyrhamnonate aldolase.
What is the protein family that this protein belongs to?
Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily.
Protein: RL35_BAUCH
Sequence: MPKLKSVRGAVKRFKKNSSGCFKHKQAYLRHLLTKKSTNRKRNLRFKSIVSKGDKNLVVRCLPYA
What are the official names of this protein?
50S ribosomal protein L35.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL35 family.
Protein: RPOB_VIBC1
Sequence: MVYSYTEKKRIRKDFGTRPQVLDIPYLLSIQLDSFDKFIEQDPEGQYGLEAAFRSVFPIQSYNGNSELQYVSYRLGEPVFDVKECQIRGVTYSKPLRVKLRLVIFDKDAPAGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARVIPYRGSWLDFEFDPKDNLYVRIDRRRKLPASIILRALGKTSEEILDIFFEKVNFEVKDQTLLMELVPDRLRGETASFDIEANGKTYVEQGRRVTARHIRQLEKDGVDHIEVPVEYIVGKVASKDYINEATGEIIVNANQEISLEALANLSQAGHKSLETLFTNDLDHGPFMSETLRIDSTVDRISALVEIYRMMRPGEPPTKEAAEALFESLFFSEERYDLSTVGRMKFNSSIGREDAQEQGTLDELDIVEVMKKLIAIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDAIMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVDGVVTDEVDYLSAIEEGQFVIAQANAALTEEGGFADELITARQKGESGLHPREHAQYMDVATNQVVSIAASLIPFLEHDDANRALMGANMQRQAVPTLKADKPLVGTGIERNVAVDSGVTAVAKRGGVIQSVDASRIVVKVNEEELVPGEAGIDIYNLTKYTRSNQNTCINQRPCVMPGEPVSRGDVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELTCVARDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPNSVSGTIIDVQVFTRDGVEKDKRALEIEQMQLKEAKKDLTEEFQILEGGLLNRVRAVLIDGGYSEAKLDTTDRKKWLELTLEDDALQTQLEQLAEQWDELKADFDKKFETKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPVEDMPYDEKGQPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGDKINQMVKEQQELAKFREFLQKVYDLGETRQKVDIASLSDDEVRTLIKNLRGGLPIATPVFDGAPEASIKALLKLADLPESGQLKLFDGRTGDQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHSMEPGMPESFNVLLKEIRSLGINIELEDEE
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta, RNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta chain family.
Protein: RRF_SHIBS
Sequence: MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF
What is the function of this protein?
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis.  May increase the efficiency of translation by recycling ribosomes from one round of translation to another.
What are the official names of this protein?
Ribosome-recycling factor, RRF, Ribosome-releasing factor.
What is the protein family that this protein belongs to?
Belongs to the RRF family.
Protein: SYE2_ALIB4
Sequence: MLRFAPSPTGDMHIGNLRVAIFNYIVSKQLKEDLIIRIEDTDKERNIEGKDKEILEILNLFSIEYKTVFYQSDNLKYHQKMALQLMTQKKAFACFCSDEKLEELREESIKKGIPFRYDGFCENLSDEAVLNVNAPFTVRLKKPDHNIKFTDLLKGDFDYAPFDIDSFIILRQDKTPTYNYACSVDDMLMDISIVIRGEDHVSNTPKQIHIRDSLGYTKEIKYVHLPIILNAQTGKKMSKRDDASSVKWLIEQGFLPSAIANYLVLMGNKTPTEIFTLEEAIEWFKIENISKSSAKFDIDKLRFINRKHIENLDDMRLSKILGFADGDIGKLGKLFLEEASTIKEIKEKIEPIFATKTTLEGFENEFKSIKECLQKATYFDNYEDLKNYIVNETSLKGKNLFKPLRYILTGVENGPNLSDIYPLIKNYLGDIIK
What is the function of this protein?
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
What are the official names of this protein?
Glutamate--tRNA ligase 2, Glutamyl-tRNA synthetase 2, GluRS 2.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PPNP_VIBPA
Sequence: MSIKENSYFAGGVKSLGFNQHGQDVSVGVMLPGEYTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDATAYLCEYL
What is the function of this protein?
Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases.  Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates.  Also catalyzes the reverse reactions.
What are the official names of this protein?
Pyrimidine/purine nucleoside phosphorylase, Adenosine phosphorylase, Cytidine phosphorylase, Guanosine phosphorylase, Inosine phosphorylase, Thymidine phosphorylase, Uridine phosphorylase, Xanthosine phosphorylase.
What is the protein family that this protein belongs to?
Belongs to the nucleoside phosphorylase PpnP family.
Protein: YHEJ_BACSU
Sequence: MFIKQFHIGAANLLFCFRERFFRSDRALKSAVRNISVKKGMELTLHAFFIYKI
What are the official names of this protein?
Uncharacterized protein YheJ.
Protein: HPRT_METPW
Sequence: MFEKLKKSLIEAPVVKKGDYDYFVHPITDGVPLVVPEILEEVADGVSKFGNMNVDKIVCVEAMGIHIATALSLKTGIPFVVVRKRSYGLEGEVAVHQMTGYSEGELYINGLNSGDRIILVDDVVSTGGTMIAVLKALKAIKVDIVDVMAVIEKGKGKCIVEDATGVTVRSLVKLNVVNGKVVIKGSIDES
What is the function of this protein?
Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis.
What are the official names of this protein?
Hypoxanthine/guanine phosphoribosyltransferase, HGPRTase.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family. Archaeal HPRT subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RIMK_COXBR
Sequence: MKIAILSTKQELSSTQRLKEAALARGHKVKIINTLRCYMSLSQEKPTIHYMGKELARYDAVIPRIGASITFYGTAVVRQFEMMGTFCLNSSMSITRSRDKFRSLQFLSRKGIDLPITGFAHSPDDIEDLIQMVGGTPLIIKLIEGTQGIGVVLAETKKAAESVIQAFLGLKVNILIQEFIGETQGRDIRCFVIGNKVVATMQREARPGDFRSNVHRGGTTKLIKITPQEREISINAAKALGLNVAGVDLLRSKRGPLVLEVNSSPGLEGIENITKKDIAGMIIEFIEKNAKPIKAYSRYQG
What are the official names of this protein?
Probable alpha-L-glutamate ligase.
What is the protein family that this protein belongs to?
Belongs to the RimK family.
Protein: RNFE_YERPP
Sequence: MSEAKNLLAQGLWKNNSALVQLLGLCPLLAVSSTATNALGLGLATTLVLVCTNTAVSALRRWVPSEIRIPIYVMIIASVVSTVQMLINAYAFGLYQSLGIFIPLIVTNCIVIGRAEAYAAKNPVGLSALDGFAMGMGATCALFVLGALREILGNGTLFDGADMLLGSWATVLRIDILHLDTPFLLAMLPPGAFIGLGLLLAGKYVIDEKMKARKANTRVSVPQLQDGDAEKAL
What is the function of this protein?
Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
What are the official names of this protein?
Ion-translocating oxidoreductase complex subunit E, Rnf electron transport complex subunit E.
What is the protein family that this protein belongs to?
Belongs to the NqrDE/RnfAE family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.