PharMolix/UniProtQA huggingface dataset:
Protein: HIS3_RHOPS
Sequence: MTSSAASSPALDDIEEGIALRPKFDAAGLVTCVTTDARSGEVLMVAHMNAEALEKTVQSGEAWYYSRSRKRLWKKGESSGHVQRVLEIRVDCDQDAVWLRVEQAGAACHTGRQSCFYRRIDRDGSGAPLLTMVDADRLFDPAKIYPK
What is the function of this protein?
Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
What are the official names of this protein?
Phosphoribosyl-AMP cyclohydrolase, PRA-CH.
What is the protein family that this protein belongs to?
Belongs to the PRA-CH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PSD_BURVG
Sequence: MNYPHPIIAREGWPFIAIAAVIALLIHAIGGFGFAWPFWLLLVFVVQFFRDPQRPIPAQPNAVLCPADGRIVAVETSHDPYANREALKISVFMNVFNVHSQRSPVDGAISKVEYFPGAFLNAAIDKASTENERNAVVIQTASGKTVTAVQIAGLIARRILCYVRAGEPLSRGQRYGFIRFGSRVDVYLPLGSRAKVSIGEKVYASSTILAELEQ
What is the function of this protein?
Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
What are the official names of this protein?
Phosphatidylserine decarboxylase proenzyme.
What is the protein family that this protein belongs to?
Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: XERD_HAEDU
Sequence: MKKLDPIIEQFLDTLWLEQSLSHNTLLSYRLDLELFSAWLVEPRAFLTLTHTDLQLFLGDRLDKGYKSSSSARIISCLRKFFRFLCLEKYRLDDPTSMLISPRKRVQLPKSLSEEQVMDLLDAPNPLDPIELRDKAMLELLYATGLRVTELISLTIDNLNLRQGVVRVIGKGDKERLVPIGEEASYWIQEFFDYGRMILLSDQQSDVLFPSRRAKQMTRQTFWHRIKYYAILAGIDAEKLSPHVLRHAFATHLINHGADLRVVQMLLGHSDLSTTQIYTHVAKTRLKSIHKQFHPRG
What is the function of this protein?
Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules.  The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division.  It also contributes to the segregational stability of plasmids.
What are the official names of this protein?
Tyrosine recombinase XerD.
What is the protein family that this protein belongs to?
Belongs to the 'phage' integrase family. XerD subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YBEY_STRCO
Sequence: MSIDVNNESGTEVDEQAILDIARYALARMRIHPLSELSVIVVDAEAMEQLHIQWMDLPGPTDVMSFPMDELRPPSKDEEEAPQGLLGDIVLCPEVAAKQGAEAPTEHSMDEELQLLTVHGVLHLLGYDHEEPDEKAEMFGLQAAIVDGWRAEKGLTGPSPAPTVS
What is the function of this protein?
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
What are the official names of this protein?
Endoribonuclease YbeY.
What is the protein family that this protein belongs to?
Belongs to the endoribonuclease YbeY family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CDK14_PLEMO
Sequence: MHGYFGCNAAAEPGYSAFLGTPQICVTKMSTRNCQGMDSVIKPLDTIPEDKKVRVQRTQSTFDPFEKPANQVKRVHSENNACINFKTSSTGKESPKVRRHSSPSSPTSPKFGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSSKNLRQAWNKLSYVNHAEDLASKLLQCSPKNRLSAQAALSHEYFSDLPPRLWELTDMSSIFTIPNVRLQPEAGESMRAFGKNNSYGKSLSNSKH
What is the function of this protein?
Serine/threonine-protein kinase involved in the control of the eukaryotic cell cycle, whose activity is controlled by an associated cyclin.  Acts as a cell-cycle regulator of Wnt signaling pathway during G2/M phase by mediating the phosphorylation of LRP6 at 'Ser-1490', leading to the activation of the Wnt signaling pathway.  Acts as a regulator of cell cycle progression and cell proliferation via its interaction with CCDN3.  Phosphorylates RB1 in vitro, however the relevance of such result remains to be confirmed in vivo.  May also play a role in meiosis, neuron differentiation and may indirectly act as a negative regulator of insulin-responsive glucose transport (By similarity).
What are the official names of this protein?
Cyclin-dependent kinase 14, Cell division protein kinase 14.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein. Cytoplasm. Nucleus. Note=Recruited to the cell membrane by CCNY.
Protein: UHRF1_BOVIN
Sequence: MWIQVRTMDGKVAHTVDSLSRLTKVEELRKKIQELFHVEPGLQRLFYRGKQMEDGHTLFDYDVRLNDTIQLLVRQSLVLPVPVPSSSGGSKERDSELSDTDSGCGLAQSESDKSSNSGEAANEPEGKADEDECDETELGLYKVGEYVDARDTNMGAWFEAKVIRVTRKAPAHDQPSSSSSKPEDDIIYHVTYDDYPENGVVQMTSQNVRARARHTIKWEDLQVGQVVMVNYNPDLPKDRGFWYDAEILRKRETRTARELHANVRIGGDSLNDCRIVFVDEVFKIERPGEGNPMVENPMRRKSGPSCKHCKDDERKLCRMCACHVCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSVPPEEEWYCPDCRIDSSEVVQAGEKLKESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHFGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNHGAYSLVLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDLKGAEAKDWRSGKPVRVVRNVKGRKHSKYAPIEGNRYDGIYKVVRYWPEKGKSGFLVWRFLLRRDDVEPGPWTKEGKDRIKKLGLTMQYPEGYLEALARKEKENSKQAALDKEEEDGEEGFTSPRKGKRKSKSAGGDGSSRGTPKKTKVEPYSLTTQQSSLIKEDKSNMKLWTEILKSLKDGPKFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFKAQVFSCPACRYDLGRSYAMTVNQPLQAVLSQLFPGYGSGR
What is the function of this protein?
Multidomain protein that acts as a key epigenetic regulator by bridging DNA methylation and chromatin modification.  Specifically recognizes and binds hemimethylated DNA at replication forks via its YDG domain and recruits DNMT1 methyltransferase to ensure faithful propagation of the DNA methylation patterns through DNA replication.  In addition to its role in maintenance of DNA methylation, also plays a key role in chromatin modification: through its tudor-like regions and PHD-type zinc fingers, specifically recognizes and binds histone H3 trimethylated at 'Lys-9' (H3K9me3) and unmethylated at 'Arg-2' (H3R2me0), respectively, and recruits chromatin proteins.  Enriched in pericentric heterochromatin where it recruits different chromatin modifiers required for this chromatin replication.  Also localizes to euchromatic regions where it negatively regulates transcription possibly by impacting DNA methylation and histone modifications.  Has E3 ubiquitin-protein ligase activity by mediating the ubiquitination of target proteins such as histone H3 and PML.  It is still unclear how E3 ubiquitin-protein ligase activity is related to its role in chromatin in vivo.  Plays a role in DNA repair by cooperating with UHRF1 to ensure recruitment of FANCD2 to interstrand cross-links (ICLs) leading to FANCD2 activation (By similarity).
What are the official names of this protein?
E3 ubiquitin-protein ligase UHRF1, RING-type E3 ubiquitin transferase UHRF1, Ubiquitin-like PHD and RING finger domain-containing protein 1, Ubiquitin-like-containing PHD and RING finger domains protein 1.
What are the subcellular locations of this protein?
Nucleus. Note=Localizes to replication foci. Enriched in pericentric heterochromatin. Also localizes to euchromatic regions (By similarity).
Protein: NDHJ_PANGI
Sequence: MQGRLSAWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYATHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic, NAD(P)H dehydrogenase subunit J, NADH-plastoquinone oxidoreductase subunit J.
What is the protein family that this protein belongs to?
Belongs to the complex I 30 kDa subunit family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side.
Protein: ENO_BACCQ
Sequence: MSTIIDVYAREVLDSRGNPTVEVEVYTESGAFGRAIVPSGASTGEHEAVELRDGDKSRYLGKGVVNAVNNVNEIIAPEIVGFDVTDQAGIDRAMIELDGTPNKGKLGANAILGVSMAVAHAAADFVGLPLYRYLGGFNAKQLPTPMMNIINGGSHADNNVDFQEFMILPVGAPTFKESIRMGAEVFHALKAVLHDKGLNTAVGDEGGFAPNLGSNREALEVIIEAIEKAGYKAGENVFLGMDVASSEFYNKETGKYDLAGEGRTGLTSAEMVDFYEELCKDFPIISIEDGLDENDWDGHKLLTERLGSKVQLVGDDLFVTNTQKLAEGIEKGISNSILIKVNQIGTLTETFEAIEMAKRAGYTAVVSHRSGETEDATIADIAVATNAGQIKTGSMSRTDRIAKYNQLLRIEDELGEIAVYDGIKSFYNIKR
What is the function of this protein?
Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate.  It is essential for the degradation of carbohydrates via glycolysis.
What are the official names of this protein?
Enolase, 2-phospho-D-glycerate hydro-lyase, 2-phosphoglycerate dehydratase.
What is the protein family that this protein belongs to?
Belongs to the enolase family.
What are the subcellular locations of this protein?
Cytoplasm. Secreted. Cell surface. Note=Fractions of enolase are present in both the cytoplasm and on the cell surface. The export of enolase possibly depends on the covalent binding to the substrate; once secreted, it remains attached to the cell surface.
Protein: ATPA_GLOC7
Sequence: MVSIRPDEISSIIRQQIESYDQQVQVSNVGTVLQVGDGTARIYGLQQAMAQELLEFEDGTIGIALNLEEDNVGAVLMGSGYGIQEGSTVKATGRIAQVPVGEALVSRIVDALGRPIDGKGPINTNETRLLESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTIINQKGEDVICVYVAIGQKASTVAQVVDTLTEKGAMDYTVVVSASANDPATLQYLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQISLLMRRPPGREAYPGDVFYLHSRLLERAAKLNDQLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVSRVGSAAQTKAMKQVAGKLKLELAQFAELEAFSQFASDLDAATQAQLARGQRLREVLKQPQNSPLAVWEQVAIVYAGLNGYLDDIPPAQVTTFTQGLRDYLRNSKPKFPEIVGNEKKLTDEAESLLKEAIGEFKQGFTA
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Peripheral membrane protein.
Protein: HMP_VIBPA
Sequence: MLSNQTIEIVKATAPLIAETGPKLTAHFYDRMFTHNPELKDIFNMSNQRNGDQREALFNAICAYAANIENLPALLGAVEKIAHKHTSFLITKDQYQIVGKHLIATIDELFNPGQEVLDAWAEAYGVLANVFIQREEQIYQANASQEGGWRGLREFELVGKQLESEHICSFVFKPTDGSKVTKYKPGQYLGIYINSDKFENQEIRQYSLSSSVQENTYRISVKREQGGKVSNYLHDELNIGDKVKLAAPAGDFFMDVDTNTPVVLISAGVGLTPTLSMLESLTEHHAPVTWVHATENSKHHAFKEHVNQLVTAKENMNALIWYNQPTAEDKIGEDFHFTGFVNLHEIEAALKQDNVQVYFCGPVGFMQHVAKQLQELGVPQEQFHYECFGPHKVV
What is the function of this protein?
Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds.  Therefore, plays a central role in the inducible response to nitrosative stress (By similarity).
What are the official names of this protein?
Flavohemoprotein, Flavohemoglobin, Hemoglobin-like protein, Nitric oxide dioxygenase, NO oxygenase, NOD.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
Protein: ISPE_NEIMF
Sequence: MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQDTVYLKSRDDGKIILHNPVDGMPQEADLSYRAASLLQKYARNPAGVEIWLDKKIPTGAGLGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLDEMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKEYPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKHPWLSV
What is the function of this protein?
Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
What are the official names of this protein?
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, CMK, 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase.
What is the protein family that this protein belongs to?
Belongs to the GHMP kinase family. IspE subfamily.
Protein: NO12B_MEDSA
Sequence: MASFSLSILVFFISALVLVPQGFAEYYLNPAYRPPQTKPPVNKPSHKEPPVHKPPHKEPPVNKPRHKEPPVHKPPHKDPPVNKPPQKESPVHKPPRKEPPTHKHPPAEDNIHF
What is the function of this protein?
Involved in the infection process during the plant-rhizobium interaction.
What are the official names of this protein?
Early nodulin-12B, N-12B.
What is the protein family that this protein belongs to?
Belongs to the plant proline-rich protein superfamily. ENOD12 family.
What are the subcellular locations of this protein?
Secreted, cell wall.
Protein: Y3021_BACCN
Sequence: MQNISKILVDADACPVKDEIVQIGTKFHVEILFVASYAHRSRKQQGNWIYVDSEQDEVDFYIYKHAKATDLVITQDMGLAGLLVKKGVYVLSPRGKFVTDEQMDTILYSRYVSAKLRRQGTYTKGPKSFSKQDRQSFLTSLEKILSNYKGIL
What are the official names of this protein?
UPF0178 protein Bcer98_3021.
What is the protein family that this protein belongs to?
Belongs to the UPF0178 family.
Protein: RSSA_PLAF7
Sequence: MSNKKGQSPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAISNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGVIPRSEPWNVMVDMFLWRDPEQFELKNLANEENTPTAPHLIENQYAAEAPYDEWTKKEEWNDNTNEDWKNPIAAEEW
What is the function of this protein?
Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell (Probable).  The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules (Probable).  The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain (Probable).  The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel (Probable).  Required for the assembly and/or stability of the 40S ribosomal subunit.  Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (By similarity).
What are the official names of this protein?
40S ribosomal protein SA, 40S ribosomal protein S2.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS2 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ACX13_CAEEL
Sequence: MSSICKGDNSDLTEERKNATFDTDKMAAVIYGREEIASRRRQLTESISRIHELAESKPLVFMTREEKIAESCRKLEVLSRHWNQTPFNRDNEEDALHIYREVLGMEGHPLALHDTMFIPTLVAQASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEFILNTPTITALKWWPGALGKSSNNAIVVANLLIKDQNYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHRIPRTNLLMRHTKVEANGTYIKPSHAKIGYSSMVKVRSRMAMDQGLFLASALVIAVRYSAVRRQGFLEDKTQKVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHALTSGLKSVVTHQTGEGIEQARMACGEHGYSMASYISEIYGVAIGGCTYEGENMVMLLQLARYLVKSVELIKSGEEKKLGPMVSYLAAKGGHPDLSSLNGYVTAFEHMARRQAWKATEKFLKLMETGESREVAWNKSAVELTRASRLHTRLFIIEAFMRRVSRIEDIPVKEVLTDLLHLHVNYELLDVATYALEFMSSTQLDYIRDQLYLYLEKIRPSAVSLVDSFQISDMQLRSVLGRRDGNVYENLFKWAKSSPLNKSDVLPSVDKYLKPMMEKAKL
What is the function of this protein?
Involved in the first step of peroxisomal beta-oxidation by catalyzing the desaturation of fatty acid-derived side chains of ascaroside pheromones, which regulates development and behavior (PubMed:20610393, PubMed:25775534, PubMed:29537254).  Specifically, shortens ascarosides with a 7-carbon side chain (asc-C7) (PubMed:25775534, PubMed:29537254).  Does not catalyze the desaturation of fatty acids or hydroxylated fatty acids (PubMed:25775534, PubMed:29537254).  Involved in the biosynthesis of asc-C6-MK (daumone 2) and asc-delta-C9 (daumone 3) but not asc-C7 (daumone 1); daumones are pheromones produced during unfavourable growth conditions which promote entry into the dauer stage (PubMed:20610393).
What are the official names of this protein?
Acyl-coenzyme A oxidase acox-1.3.
What is the protein family that this protein belongs to?
Belongs to the acyl-CoA oxidase family.
What are the subcellular locations of this protein?
Peroxisome.
Protein: SYFB_BORBR
Sequence: MQFPESWLRSLVNPSIGTDELAHRLTMAGLEVEETEPAAPPFTGVVVAHIVDIAPHPDADKLRVCQVDDGSGALLQIVCGAPNAAAGLTVPLARVGAELPGGMKIGVAKMRGVQSSGMLCSARELGLSQDHAGLLELPAALRPGTDIRAALDLDDTLFTLKLTPNRADCLSILGVAREVAALTGTPLTAPAAEPVPVTIDHRLPVAIQAPDLCGRFAGRVIQGVNARAATPEWMKTRLERAGQRSVSALVDISNYVMLEVGRPSHVFDLDKIGGDLSVRWAREGETLELLNGQAVALDPKVGVVVAGEQVESLAGIMGGEATSVTLDTRNIYLEAAFWWPGAIAGRARRYKFSSEASHRFERGVDYASIPEHIELITRLILDICGGQAGPVDDQCVNLPVREPVRMRLARCHRVLGVAVERAEVAQIFTRLGLPFQEQGDDFVVTPPSYRFDIEIEEDLIEEVARVYGFERIPDVPPVARAKMHAQPEARRGAHAVRRLVAARDYQEVVNYSFVEAAWERDYAGNDNPVRLVNPIASHLSVMRSSLIAGLVAIVRHNANRKQSRVRLFELGRVFHRDPQLADGPLEVAGVRQPLMLAGVAWGGAVEEQWGVPHRQVDFYDVKQDVEALFGARADALRFVADRYPALHPGRSARIELDGQPIGWLGELHPQWTQQADLHHAPVVFELDFEALAERRLPAVRELSRQPAVVRDLALWVDAKLPAQAMLDTVAAAIARDPQLSVVQDAQVFDVWREKPVAGQTVTEKSLAFRFWLQDTEVTLDEARVADCIARIKDALVAAHNARQRA
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MTEF2_HUMAN
Sequence: MLWKLLLRSQSCRLCSFRKMRSPPKYRPFLACFTYTTDKQSSKENTRTVEKLYKCSVDIRKIRRLKGWVLLEDETYVEEIANILQELGADETAVASILERCPEAIVCSPTAVNTQRKLWQLVCKNEEELIKLIEQFPESFFTIKDQENQKLNVQFFQELGLKNVVISRLLTAAPNVFHNPVEKNKQMVRILQESYLDVGGSEANMKVWLLKLLSQNPFILLNSPTAIKETLEFLQEQGFTSFEILQLLSKLKGFLFQLCPRSIQNSISFSKNAFKCTDHDLKQLVLKCPALLYYSVPVLEERMQGLLREGISIAQIRETPMVLELTPQIVQYRIRKLNSSGYRIKDGHLANLNGSKKEFEANFGKIQAKKVRPLFNPVAPLNVEE
What is the function of this protein?
Binds mitochondrial DNA and plays a role in the regulation of transcription of mitochondrial mRNA and rRNA species.
What are the official names of this protein?
Transcription termination factor 2, mitochondrial, Mitochondrial transcription termination factor 2, mTERF2, Mitochondrial transcription termination factor-like protein, mTERF-like, mTERFL, mTERF domain-containing protein 3, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the mTERF family.
What are the subcellular locations of this protein?
Mitochondrion. Mitochondrion matrix, mitochondrion nucleoid.
Protein: AC4_PHUV
Sequence: MKMGNLICTCLFSSKENTNARTTDSLTSYPLPDQHISIRTFRELNQAPTSRRTSTKTAIP
What is the function of this protein?
Pathogenicity determinant (By similarity).  May act as a suppressor of RNA-mediated gene silencing, also known as post-transcriptional gene silencing (PTGS), a mechanism of plant viral defense that limits the accumulation of viral RNAs.
What are the official names of this protein?
Protein AC4, Protein AL4.
What is the protein family that this protein belongs to?
Belongs to the geminiviridae protein AC4/C4 family.
Protein: RIMM_HELPY
Sequence: MVSMLLVGRIGKSVGLNGGLRLHLESDFPECLKKGVKVSVAPLNAFSCVSSFKEYIIHSYEHAKNLLFLETIQTPEKAKELTNLGLFMSEAESKKLCVLKEGEFFYCDLVGLSVVEENEILGKVIEIQRISQTDYFLVETTLNLVEKGLAKIFLIPYRDFYIQEILLQDKKITTHNAKTLLENS
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1910_MYCTO
Sequence: MESTVAHAFHRFALAILGLALPVALVAYGGNGDSRKAAPLAPKAAALGRSMPETPTGDVLTISSPAFADGAPIPEQYTCKGANIAPPLTWSAPFGGALVVDDPDAPREPYVHWIVIGIAPGAGSTADGETPGGGISLPNSSGQPAYTGPCPPAGTGTHHYRFTLYHLPAVPPLAGLAGTQAARVIAQAATMQARLIGTYEG
What are the official names of this protein?
UPF0098 protein MT1961.
What is the protein family that this protein belongs to?
Belongs to the UPF0098 family.
Protein: TRUB_SACD2
Sequence: MGNRKRPGRPISGVIVIDKPAGDSSNGVLQRVKRLFFANKAGHTGSLDPLATGVLPVCFGDATKFSQFLLDSDKEYVSTFRFGEVTDTADSDGEVLESIDASKLTKADVLKAIKAYIGDIDQVPPMYSALKRNGQPLYKLARQGIEVEREPRPVTVYEFELLAFRPGAVAEADVRVFCSKGTYIRSLASDIGADLELGGHVAKLRRTQAGPFTIDQSITIEELEQERGERLAEVLDHHLLPTDIAVADFPSLELDDNSAFYFSRGQAVMDSRVYRLGDEGDKVRVFDSSGKFYGVAEITDEGTVAPKRLVSQS
What is the function of this protein?
Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase B, tRNA pseudouridine(55) synthase, Psi55 synthase, tRNA pseudouridylate synthase, tRNA-uridine isomerase.
What is the protein family that this protein belongs to?
Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
Protein: ACTY_LIMPO
Sequence: MCEEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKVLTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEACGIQETTFNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEICALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
What is the function of this protein?
Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
What are the official names of this protein?
Actin-11.
What is the protein family that this protein belongs to?
Belongs to the actin family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: MP703_ORYSJ
Sequence: MADGVEEGNAVAPRGPARRRGTVRASLDADEFIALMHGSDPVRVELTRLENELRDKERELGEAQTEIRALRLSERAREKAVEELTDELEKMFEKLKLTESLLDSKNLEVKKINDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQDDNRALDRLTKQKEAALLDAERTVEIAMAKAAMVDDLQNKNQELMKQIEICHEENKILDKLQRQKVAEVKKLSLTVKELEEAVLRGGATANVVRDYQRQVQEVNDQKKTLECELARAKVTANRVAVVVANEWKDSNDKVMPVKQWLEERRFLQGEMQQLRDKLAVAERTARSEAQLKEKYQLRLKVLEDGLRGPPSGSSRLPTEGKSFSNGPSRRLSLGGADNMSKLSPNGLLARRSPSFHSRSSLSSSSSLVLKHAKGTSKSFDGGTRSLDRSKINGNGAHLLNRSTDAVRDCETNDSWKGNADEGTIENTNSNTDESNKETANNKSAEMVSGFLYDMLQKEVISLRKACHEKDQSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVDKEQEVKARRLGSSKGTGSSQVLSGSRSSSRSGLTRNYQ
What is the function of this protein?
Plant-specific protein that interact with microtubules.
What are the official names of this protein?
Microtubule-associated protein 70-3, AtMAP70-3, 70 kDa microtubule-associated protein 3.
What is the protein family that this protein belongs to?
Belongs to the MAP70 family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton. Note=Associated to microtubules.
Protein: RNPA_LACDA
Sequence: MRKSYRIKSEQDFQTVFENGESVANRAFVIYVLPRKQNKHFRVGISVGKKVGHTAVVRNRLKRYIRAVLTENRDRIAPDLDFLVIARPYAHDFDWEKTRENLLHALNLAHVIEEMPNKEEK
What is the function of this protein?
RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus.  It can also cleave other RNA substrates such as 4. 5S RNA.  The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
What are the official names of this protein?
Ribonuclease P protein component, RNase P protein, RNaseP protein, Protein C5.
What is the protein family that this protein belongs to?
Belongs to the RnpA family.