PharMolix/UniProtQA huggingface dataset:
Protein: MED8_HUMAN
Sequence: MQREEKQLEASLDALLSQVADLKNSLGSFICKLENEYGRLTWPSVLDSFALLSGQLNTLNKVLKHEKTPLFRNQVIIPLVLSPDRDEDLMRQTEGRVPVFSHEVVPDHLRTKPDPEVEEQEKQLTTDAARIGADAAQKQIQSLNKMCSNLLEKISKEERESESGGLRPNKQTFNPTDTNALVAAVAFGKGLSNWRPSGSSGPGQAGQPGAGTILAGTSGLQQVQMAGAPSQQQPMLSGVQMAQAGQPGKMPSGIKTNIKSASMHPYQR
What is the function of this protein?
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes.  Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery.  Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.  May play a role as a target recruitment subunit in E3 ubiquitin-protein ligase complexes and thus in ubiquitination and subsequent proteasomal degradation of target proteins.
What are the official names of this protein?
Mediator of RNA polymerase II transcription subunit 8, Activator-recruited cofactor 32 kDa component, ARC32, Mediator complex subunit 8.
What is the protein family that this protein belongs to?
Belongs to the Mediator complex subunit 8 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: SYR_SYMTH
Sequence: MRIVEQIKSEIRQALADAVSRAVAAGALVGPAPEVFLETPKAREHGDFATNLAMVMARQEKKAPRVIAQAIVDHLQTEGTWIESAEIAGPGFINLRLRQGWVHQVLPAIQAEGADYGKSDHGGKQRILLEYVSANPTGPMVLVQARAGAFGSSLARLLNWAGYECHTEFYVNDAGNQVKILARTVDLRAQELRGATVEIPEGYYPGEDVIDCARALLEQYPDFLEKPEEERLAFLERWAPEYFRSGHERVLRSYGVEFDRWFSERSLREAGAPARLVEWLKERGEAYEKDGAVWMRTTAYGDDKDRVLVKSDGEYTYFAADACYHKDKYDRGYATLIDILGQDHHGYLGRMKAMVECLGHPRDSLEILFTQMVRLFKDGQEFRMSKRRGNYVTLEDLLEQVSVDAARYFFLMRSLDTHMDFDLDLANLKSSDNPVFYVQYAHARICSILRQAREQGLEVPAASEVDTALLADESEVELMRKLAEFPEEIIGAADAREVHRIPRYLNELATLFHQFYSRCRVVSDDVPLSRARLLLVDCTRTVLANALGILGVSAPERM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATPG_SHEON
Sequence: MAGAKEIKTKIASVKNTQKITSAMEMVAASKMRRAQERMAASRPYAESMRKVIGHVAQGSLEYKHPYLEVREAKRVGYIVVATDRGLCGGLNVNLFKKVVADVKSWKEQGAEFEFCPIGARSVQFFKSFGGQVSAQASGLGDAPKLNDLIGTVQVMLEAYNEGKLDRLYVVFNKFVNTMTQTPVIEQLLPLPKSEDDEVAHRWDYIYEPDPKALLDTLLVRYVESQVYQGVVENIASEQAARMVAMKAATDNAGTLIDDLQLVYNKARQAAITQELSEIVSGASAV
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
What are the official names of this protein?
ATP synthase gamma chain, ATP synthase F1 sector gamma subunit, F-ATPase gamma subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase gamma chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: NU5C_GUIAB
Sequence: MEQTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQILNNLISNNEVNFVFVTLCAILLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFPVARLMPLFIVIPHIMNFISLIGIITVFFGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNYSGKRTTPLYSISLWGKEGSKISNKNFRLVTLLKMKKNGRPSFFSNKVYKMDENVINLIQPFLSIPNFGNTKTYLYPYESDNTMLFPILILILFTLFVGFLGIPFNQDVDILSKWLTPSINLLHQNSNNSIDWYEFCKDAVFSVSIAFFGIFIAFFLYKPVYSSFQNLDLINSFVKMGPKRIFSDKIKNAIYDWSYNRGYVDAFYGTFLTAGVRKLAEFTHFFDRRIIDGIPNGVGFLSFFVAEVIKSVGGGRISSYLFFYFSYVSIFLLIYYFLNL
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic, NAD(P)H dehydrogenase subunit 5, NADH-plastoquinone oxidoreductase subunit 5.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 5 family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: SYD_THET8
Sequence: MRRTHYAGSLRETHVGEEVVLEGWVNRRRDLGGLIFLDLRDREGLVQLVAHPASPAYATAERVRPEWVVRAKGLVRLRPEPNPRLATGRVEVELSALEVLAEAKTPPFPVDAGWRGEEEKEASEELRLKYRYLDLRRRRMQENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEGARDFLVPYRHEPGLFYALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELNERLMAHVFREALGVELPLPFPRLSYEEAMERYGSDKPDLRFGLELKEVGPLFRQSGFRVFQEAESVKALALPKALSRKEVAELEEVAKRHKAQGLAWARVEEGGFSGGVAKFLEPVREALLQATEARPGDTLLFVAGPRKVAATALGAVRLRAADLLGLKREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVRALAYDLVLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLDRLLALMTGSPSIREVIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVRP
What is the function of this protein?
Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).  Is specific for tRNA(Asp) since it aspartylates tRNA(Asn) 3 orders of magnitude less efficiently than tRNA(Asp).
What are the official names of this protein?
Aspartate--tRNA(Asp) ligase, Aspartyl-tRNA synthetase 1, AspRS1, Discriminating aspartyl-tRNA synthetase, D-AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TY23_PITAZ
Sequence: FPPWL
What are the official names of this protein?
Tryptophyllin-T2-3, Pha-T2-3, Tryptophyllin-2.
What is the protein family that this protein belongs to?
Belongs to the frog skin active peptide (FSAP) family. Tryptophillin subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: VKTE1_CYRHA
Sequence: MGTARFLRAVLLLSVLLMVTFPALLSAEHHDGRVDICRLPSDSGDCLRFFEMWYFDGTTCTKFVYGGYGGNDNRFPTKKACMKRCAKA
What is the function of this protein?
Serine protease inhibitor that inhibits chymotrypsin and blocks voltage-gated potassium channels (Kv).
What are the official names of this protein?
Kunitz-type U15-theraphotoxin-Hhn1e, U15-TRTX-Hhn1e, Kunitz-type serine protease inhibitor hainantoxin-XI-5, HNTX-XI-5.
What is the protein family that this protein belongs to?
Belongs to the venom Kunitz-type family. 03 (sub-Kunitz) subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: HOLB_ECOLI
Sequence: MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
What is the function of this protein?
Part of the beta sliding clamp loading complex, which hydrolyzes ATP to load the beta clamp onto primed DNA to form the DNA replication pre-initiation complex (PubMed:2040637).  DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria.  This DNA polymerase also exhibits 3' to 5' exonuclease activity.  The gamma complex (gamma(3),delta,delta') is thought to load beta dimers onto DNA by binding ATP which alters the complex's conformation so it can bind beta sliding clamp dimers and open them at one interface.  Primed DNA is recognized, ATP is hydrolyzed releasing the gamma complex and closing the beta sliding clamp ring around the primed DNA (PubMed:9927437).
What are the official names of this protein?
DNA polymerase III subunit delta'.
Protein: HIS3_LEPCP
Sequence: MSWLDQITWTDDGLVPVIAQEWQSNDVLMFAWMNREALALTAQRGEAVYWSRSRGRLWHKGEESGHVQRVHEIRIDCDADVVLLKVEQLGHQPGIACHTGRHSCFFQLLKDGAWQSVEPVLKDPSSIYK
What is the function of this protein?
Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
What are the official names of this protein?
Phosphoribosyl-AMP cyclohydrolase, PRA-CH.
What is the protein family that this protein belongs to?
Belongs to the PRA-CH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL24_STRPM
Sequence: MFVKKGDKVRVIAGKDKGTEAVVLKALPKVNKVIVEGVGMIKKHQKPNTENPQGAIVEKEAPIHVSNVQVLDKNGVAGRVGYKVVDGKKVRYSKKSGEVLD
What is the function of this protein?
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
What are the official names of this protein?
50S ribosomal protein L24.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL24 family.
Protein: RS10_ECOLC
Sequence: MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG
What is the function of this protein?
Involved in the binding of tRNA to the ribosomes.
What are the official names of this protein?
30S ribosomal protein S10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS10 family.
Protein: NU1M_DIAYO
Sequence: MFLTNLLMTIAPVLLAVAFLTLVERKILGYMQLRKGPIVVGPYGLLQPISDAVKLFTKEPLRPLTSSTTMFLMAPTLALALALTMWIPLPMPLPLTNMNLSLLFMLAMSSLAVYAILWSGWASNSNYALIGALRAVAQTISYEVTLAIILLSVLLLSGSYSLSTLIITQEYMWLILPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYTNIIMMNALTTILFLGAYNNPNTPELYTINFTTKTLLLTMAFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWYTALPIITAAIPPQT
What is the function of this protein?
Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis.  Complex I functions in the transfer of electrons from NADH to the respiratory chain.  The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
What are the official names of this protein?
NADH-ubiquinone oxidoreductase chain 1, NADH dehydrogenase subunit 1.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 1 family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: ATESY_MAGGA
Sequence: MALKLLFQCSPCSPSSLAPLQPVLVLVRPPSGAKARRNLRCCASTQVTELMTARRSANYHPNIWDYDSVQSLTSDYKAYTYLERVEKLKEDVRRTLQEAVGLLDQLELVDCIHRLGVGYHFDKEIKEILKTISTEPNNMGLIDGDLYAMALYFRLLRQHGYEVPQGVFNRFMDDSSSFKASLCNDVKGMLSLYEASYLALEGETTLDEAKAFTYRHLRGLKGNIDSNLKGLVEHALELPLHWRVLRLEARWYIDTYERMEDMNPLLLELAKLDFNIVQNVYQGQVRKMSGWWKDLGLGQKLGFARDRLMEGFLWTIGVKFEPQFAQCREVLTKINQLITTIDDVYDVYGSLEELELFTKAVDRWDTNAMEELPEYMKICFLALYNTVNEIAYDTLKEQGVDVIPYLQKSWADLCKAYLVEARWYYSGYTPTLDEYLNNAWISIAGPVILVHAYVSMIQMITKEALLDCVGSYESIMQWSSMILRLADDLATSTDELERGDVPKSIQCYMHENTASEVVAREQMRARISDIWKKMNKDVALSPLPQPFKAAAVNLARMAQCMYQHGDGHGNPHRESKDHILSLVVEPIQLMES
What is the function of this protein?
Monoterpene synthase converting geranyl diphosphate into alpha-terpineol.  In vitro, can also have an sesquiterpene synthase activity, converting farnesyl diphosphate into (E)-alpha-bisabolene (33. 1%), alpha-bisabolene (18. 7%), beta-sesquiphellandrene (15. 8%), beta-bergamotene (12. 6%), (Z)-alpha-farnesene (10. 4%), and (Z)-alpha-bisabolene (9. 4%).
What are the official names of this protein?
Alpha-terpineol synthase, chloroplastic, Mg17.
What is the protein family that this protein belongs to?
Belongs to the terpene synthase family. Tpsb subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast. Note=The transit peptide can target GFP to both chloroplasts and mitochondria when transiently expressed in a heterologous system.
Protein: PDXJ_HELPG
Sequence: MRFGLNIDHIVTLREVRKTYEPEILEALFIAKNTHKVDLITIHLREDRRHIQNEDVLRLLEISPLPINIECSINAAITDFLCSLKNKPSKVTIVPENRNEVTTEGGLDCSLKGLEEVIRAYHNKGIEVSLFIDPLKDALHFAREHQVKQVEFHTGVYANLHNALYSNANNQIHAISALKDKSPKELKEELHNAFLQLRRMSKEAFFMGITACAGHGLNYTNVKELLKIPSLRELNIGHSVVSKAVLVGLEKAILEMAQLIKR
What is the function of this protein?
Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
What are the official names of this protein?
Pyridoxine 5'-phosphate synthase, PNP synthase.
What is the protein family that this protein belongs to?
Belongs to the PNP synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FCG3A_FELCA
Sequence: MWRLLSPTALLLLVSAGTRAADLSKAMVVLEPEWNRVLVSDGVILKCEGAYPPGDNSAQWWHNGSVIPHRAPSYSIEAARSEDSGEYKCQTGLSEASDPVQLEVHTGWLLLQAPRWVFQEGDTIQLRCHSWKNKTVQKVQYFQDGRGKMFFHKNSDFYIPKATSKHSGSYFCRGLIGNKNESSEAVNITVQGPPVPSTSTFLPHWYQIAFFLVTALLFVVDTGLHVAVQRDLQSSVKEWKDGKVTWSHGP
What is the function of this protein?
Receptor for the invariable Fc fragment of immunoglobulin gamma (IgG).  Optimally activated upon binding of clustered antigen-IgG complexes displayed on cell surfaces, triggers lysis of antibody-coated cells, a process known as antibody-dependent cellular cytotoxicity (ADCC).  Does not bind free monomeric IgG, thus avoiding inappropriate effector cell activation in the absence of antigenic trigger (By similarity).  Mediates IgG effector functions on natural killer (NK) cells.  Binds antigen-IgG complexes generated upon infection and triggers NK cell-dependent cytokine production and degranulation to limit viral load and propagation (By similarity).  Fc-binding subunit that associates with FCER1G adapter to form functional signaling complexes.  Following the engagement of antigen-IgG complexes, triggers phosphorylation of immunoreceptor tyrosine-based activation motif (ITAM)-containing adapter with subsequent activation of phosphatidylinositol 3-kinase signaling and sustained elevation of intracellular calcium that ultimately drive NK cell activation (By similarity).  Mediates enhanced ADCC in response to afucosylated IgGs (PubMed:34485821).
What are the official names of this protein?
Low affinity immunoglobulin gamma Fc region receptor III-A, IgG Fc receptor III-A, Fc-gamma RIII-alpha, FcgammaRIIIA.
What are the subcellular locations of this protein?
Cell membrane; Single-pass membrane protein.
Protein: Y4583_PSESM
Sequence: MERFFENAMYASRWLLAPIYFGLSLGLLALCLKFFQEIFHVIPNIFSLAEADLILVLLSLIDMALVGGLLVMVMISGYENFVSQLDIDEDKEKLNWLGTMDSSSLKMKVAASIVAISSIHLLRVFMDATNIKPEYLMWYVIIHMTFVISAFAMGYLDKLTKH
What are the official names of this protein?
UPF0114 protein PSPTO_4583.
What is the protein family that this protein belongs to?
Belongs to the UPF0114 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: NOP16_EMENI
Sequence: MGNIRQAKKNRSSAPKQRMKRKGVLKSGKKKINVLGNAIIAENWDRKATLTQNYRRLGLMHRLNAPSGGSEKRKTENGLEEVASSLHIKGSVDAMKDSAISETLVERDPKTGKIIRVIRKDDEQVEIAGRKVRSSNPLNDPLNDLSDNEPEIKPQVKKAANQIVQQLEIQADNVAPKKPRHQSKREEEWITRLIEKHGDNYAAMARDRKLNPMQQTEGDLRRRINKWKIYTTIPSQYEVCFLILALWT
What is the function of this protein?
Involved in the biogenesis of the 60S ribosomal subunit.
What are the official names of this protein?
Nucleolar protein 16.
What is the protein family that this protein belongs to?
Belongs to the NOP16 family.
What are the subcellular locations of this protein?
Nucleus, nucleolus.
Protein: RBSA_SALTI
Sequence: MDALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSLLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKKMYAEADHLLAKLNLRFKSDKLVGELSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETDSLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVATLTEDSLIEMMVGRKLEDQYPHLDNAPGEIRLKVDNLCGPGVNDVSFVLRKGEILGISGLMGTGRTELMKVLYGAMPRTSGYVTLEGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALDYFSRAGGSLKHKDEQQAVGDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKLNRVNQE
What is the function of this protein?
Part of the ABC transporter complex RbsABC involved in ribose import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Ribose import ATP-binding protein RbsA.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: ASAR_AERSA
Sequence: MKQDQLLEYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAYTANHMLACDPIIQLARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNGISFPLHGAAGENGILSFITAERASSDLLLESSPILSWMSNYIFEAAIRIVRVSLREDDPQEALTDRETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSSGILLPNLEQVVVTNFPKLMQ
What is the function of this protein?
Functions as a BHL-responsive transcriptional regulator.
What are the official names of this protein?
Transcriptional activator protein AsaR.
What is the protein family that this protein belongs to?
Belongs to the autoinducer-regulated transcriptional regulatory protein family.
Protein: SDHE_XANOR
Sequence: MQRHRPLGQVPLSFSARHTARWRDEMDEQTRLKKLRWRCRRGMRELDQLFGRYLDQRWAQAPDAERAVFLQLLDCEDDKLWRWFMGYEACPDVANAALIADIRALPA
What is the function of this protein?
An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins.  Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol.  Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins as well.
What are the official names of this protein?
FAD assembly factor SdhE.
What is the protein family that this protein belongs to?
Belongs to the SdhE FAD assembly factor family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PGK_SALRD
Sequence: MHKLTLDDVDVRGQRVLIRVDFNVPLDTSEDGSPCVGDDTRIRAALPTIRHVLDHGGKAILVSHLGRPGGQPDPDLSLACVADHLGTLIEERVRFSSNTVGDTVEEVINGMSEGSVILLENTRFDAGEKANDEAFATALANLADVYVNDAFGAAHRAHASTAGVAEFMDVAALGRLMEDEIEALTRVRDDPAHPMVAILGGSKVSDKLGTIRALSETADHLLIGGAMSYTFLKVLGHEVGASRVEADRLDTAEDLYEQAEGTITLPTDHVVAEAPEADATASVVEGDIPAELMGLDIGPATIDAYRDRILGAATVVWNGPMGVFEVDPFADGTTAIAEAMADATDDGAFSVVGGGDSVSALTRSGCDDRISHVSTGGGALLTFLEGAPLPGVEALTDA
What are the official names of this protein?
Phosphoglycerate kinase.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CSS4A_PROMP
Sequence: MLICKVLKPLVSTNRIPGFEHKHLQVVLDGSSNKVAVDAVGCKPGDWVICVGSSAAREAAGSKSYPSDLTIVGIIDHWDPDSPKQIEV
What is the function of this protein?
Probably forms vertices in the carboxysome, a polyhedral inclusion where RuBisCO (ribulose bisphosphate carboxylase, cbbL-cbbS) is sequestered.  Has been modeled to induce curvature upon insertion into an otherwise flat hexagonal layer of major carboxysome subunits (By similarity).  Has not been identified in purified carboxysomes; it is expected to be present in very low amounts (Probable).
What are the official names of this protein?
Carboxysome shell vertex protein CsoS4A.
What is the protein family that this protein belongs to?
Belongs to the CcmL/EutN family. CsoS4 subfamily.
What are the subcellular locations of this protein?
Carboxysome. Note=Probably forms vertices in the polyhedral carboxysome (By similarity). This bacterium makes alpha-type carboxysomes (PubMed:22155772).
Protein: DRE2_DROSE
Sequence: MENFKGLQKSLYIWTDSADLDKRVEQLKAATGGDVALENVHRLSFSSYANSSFDLIVIECAQLTDSYVKLLHMLKPSGKLHLVSFIGPAASLLQEIKLSGFINCREDSPDALSAEKPGYETGSSARLSFAKKNANAANVWKISGDDEELIDEEELLDEEDKQKPDPAGLRVCSTTGKRKACKNCSCGLAEELETEKQSQKATENAKSSCGNCYLGDAFRCSTCPYLGMPAFKPGEKVQLADNLLKSDI
What is the function of this protein?
Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery.  Required for the maturation of extramitochondrial Fe-S proteins.  Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex.  Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase.  Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by providing electrons for reduction during radical cofactor maturation in the catalytic small subunit.
What are the official names of this protein?
Anamorsin homolog, Fe-S cluster assembly protein DRE2 homolog.
What is the protein family that this protein belongs to?
Belongs to the anamorsin family.
What are the subcellular locations of this protein?
Cytoplasm. Mitochondrion intermembrane space.
Protein: CWP2_YEAST
Sequence: MQFSTVASVAFVALANFVAAESAAAISQITDGQIQATTTATTEATTTAAPSSTVETVSPSSTETISQQTENGAAKAAVGMGAGALAAAAMLL
What is the function of this protein?
Component of the cell wall.
What are the official names of this protein?
Cell wall protein CWP2, Low pH resistance protein 1.
What is the protein family that this protein belongs to?
Belongs to the SRP1/TIP1 family.
What are the subcellular locations of this protein?
Secreted, cell wall. Membrane; Lipid-anchor, GPI- anchor. Note=Covalently-linked GPI-modified cell wall protein (GPI-CWP) found in young daughter cells.
Protein: URE2_ACTPL
Sequence: MIPGEYQLADGDVQANVGRKTVKLEVVNSGDRPIQVGSHYHFFETNHALKFDRLQARGMRLNVPSGNAVRFEPGEAKEVELVEFGGNKVIYGFHNEIDGKL
What are the official names of this protein?
Urease subunit beta, Urea amidohydrolase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the urease beta subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEF_STREM
Sequence: MSAQDKLIKAQHLIDMNDIIREGNPTLRAVAKEVEFPLSDDDIILGEKMMQFLKHSQDPVMGEKLGLRAGVGLAAPQIDVSKRIIAVLVPNPEDSEGNPPKEAYSMEEVLYNPKIVSHSVQDAALADGEGCLSVDRVVEGYVVRHARVTVEYYDKHNEKHRIKLKGYNAIVVQHEIDHINGVLFYDRINAKNPFEAKEGMLILE
What is the function of this protein?
Removes the formyl group from the N-terminal Met of newly synthesized proteins.  Requires at least a dipeptide for an efficient rate of reaction.  N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
What are the official names of this protein?
Peptide deformylase, PDF, Polypeptide deformylase.
What is the protein family that this protein belongs to?
Belongs to the polypeptide deformylase family.
Protein: DAPA_STAAM
Sequence: MTHLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASFQAKALGADAIMLITPYYNKTNQRGLVKHFEAITDAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLEFGNYELRLPLVSLEDTDTKVLREAYDTFKAGENE
What is the function of this protein?
Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
What are the official names of this protein?
4-hydroxy-tetrahydrodipicolinate synthase, HTPA synthase.
What is the protein family that this protein belongs to?
Belongs to the DapA family.
What are the subcellular locations of this protein?
Cytoplasm.