PharMolix/UniProtQA huggingface dataset:
Protein: CKX11_ORYSJ
Sequence: MMLAYMDHAAAAAEPDAGAEPAVAAVDAAEFAAAMDFGGLVSARPAAVVRPASSDDVASAIRAAARTAHLTVAARGNGHSVAGQAMARGGLVLDMRALPRRMQLVVAPSGEKFADVPGGALWEEVLHWAVSKHGLAPASWTDYLRLTVGGTLSNGGVSGQSFRYGPQVSNVAQLEVVTGDGECHVCSRSADPDLFFAVLGGLGQFGVITRARIPLSPAPQTVRWTRVVYASFADYAADAEWLVTRPPHEAFDYVEGFAFVRSDDPVNGWPTVPIPDGAHFDASLLPANAGPVLYCLEVALYQRGGGGDGGGDDMDKRVGEMMRQLKYVRGLEFAAGVGYVDFLSRVNRVEDEARRNGSWAAPHPWLNLFISSRDIAAFDRAVLNGMLADGVDGPMLIYPMLKSKWDPATSVALPNGEIFYLVALLRFCRPYPGGGPPVDELVAQNNAIIDACRSNGYDYKIYFPSYHAQSDWSRHFGAKWSRFVDRKARYDPLAILAPGQNIFARTPSSVAAAAAVIV
What is the function of this protein?
Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group (PubMed:33448635).  Catalyzes the oxidation of various types of cytokinins in vitro with high efficiency toward trans-zeatin (tZ) and cis-zeatin (cZ), and lower efficiency toward isopentenyladenine (iP), cis-zeatin riboside (cZR), dihydrozeatin (DHZ), and isopentenyladenine riboside (iPR) (PubMed:33448635).  Involved in the degradation of cytosolic cytokinins (PubMed:33448635).  Involved in the regulation of photosynthesis and grain number, thereby coordinating the source-sink relationship simultaneously (PubMed:33448635).
What are the official names of this protein?
Cytokinin dehydrogenase 11, Cytokinin oxidase 11, OsCKX11.
What is the protein family that this protein belongs to?
Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
What are the subcellular locations of this protein?
Secreted, extracellular space.
Protein: VU94_HHV6Z
Sequence: MFSIINPSDDFWTKDKYIMLTIKGPVEWEAEIPGISTDFFCKFSNVPVPHFRDMHSPGAPDIKWITACTKMIDVILNYWNNKTAVPTPAKWYAQAENKAGRPSLTLLIALDGIPTATIGKHTTEIRGVLIKDFFDGNAPKIDDWCTYAKTKKNGGGTQVFSLSYIPFALLQIIRPQFQWAWTNINELGDVCDEIHRKHIISHFNKKPNVKLMLFPKDGTNRISLKSKFLGTIEWLSDLGIVTEDAWIRRDVRSYMQLLTLTHGDVLIHRALSISKKRIRATRKAIDFIAHIDTDFEIYENPVYQLFCLQSFDPILAGTILYQWLSHRRGKKNTVSFIGPPGCGKSMLTGAILENIPLHGILHGSLNTKNLRAYGQVLVLWWKDISINFENFNIIKSLLGGQKIIFPINENDHVQIGPCPIIATSCVDIRSMVHSNIHKINLSQRVYNFTFDKVIPRNFPVIQKDDINQFLFWARNRSINCFIDYTVPKIL
What are the official names of this protein?
Protein U94.
Protein: AMELX_RAT
Sequence: MGTWILFACLLGAAFAMPLPPHPGSPGYINLSYEKSHSQAINTDRTALVLTPLKWYQSMIRQPYPSYGYEPMGGWLHHQIIPVLSQQHPPSHTLQPHHHLPVVPAQQPVAPQQPMMPVPGHHSMTPTQHHQPNIPPSAQQPFQQPFQPQAIPPQSHQPMQPQSPLHPMQPLAPQPPLPPLFSMQPLSPILPELPLEAWPATDKTKREEVD
What is the function of this protein?
Plays a role in the biomineralization of teeth.  Seems to regulate the formation of crystallites during the secretory stage of tooth enamel development.  Thought to play a major role in the structural organization and mineralization of developing enamel.
What are the official names of this protein?
Amelogenin, X isoform, Leucine-rich amelogenin peptide, LRAP.
What is the protein family that this protein belongs to?
Belongs to the amelogenin family.
What are the subcellular locations of this protein?
Secreted, extracellular space, extracellular matrix.
Protein: AMPR_PROST
Sequence: MSGNYRHRLPLNALRAFEASARHLSFTRAGLELNVTQAAVSQQVRLLEEQLGLELFIRLPRGLALTDEGLALLPVLSRSFDQIESLLQQFEDGHYHEVLSVSVVGTFAVGWLLPRLPAFAALYPYIDLRIMTHNNVVNLAAEGVDFAIRFGEGLWPLAENTALFSAAHTVLCSEKVANKLTHPLDLKDHSLMRSYRKDEWEKWQIAAELEPWRVKGPIFDSSRLMVEAALLTDGVALAPSCMFEHELSAGTLVQPFDISVTLGGYWLSRLKSRPTTPAMAIFRHWLLAEVQK
What is the function of this protein?
This protein is a positive regulator of gene expression of beta-lactamase (AmpC).
What are the official names of this protein?
HTH-type transcriptional activator AmpR.
What is the protein family that this protein belongs to?
Belongs to the LysR transcriptional regulatory family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ASP2_STAA8
Sequence: MPRKFRVLQIGGDDLEPIFQHKKGVSWDYFDIGLFEFDSGYVEAIEAIVEAEGRFDFIYIQAPYSETLTNLLQMISEPYNTYVDESFWSVEYEQDENVQKYVVQPLHYRNIEERNNKLEAVSFSGQYGDKVSPKLALVHPNFKGDVVYQGNSELTLSGEFGKEFKPIASWQNNLVYDKDKVIQIWPEFDIDGAVELQYTFRLIQTGADGALIEQIVLTDDMLDSPLEIPAKPFDAYISVTVKARGNGTVHLGPIHKRWSRLDMGQFLLGGSRFVDSQRQEFIYYFHPGDMKPPLNVYFSGYRTAEGFEGYYMMKRMNAPFLLIGDPRVEGGSFYIGSSEYEQGIINVIDETLEKLNFKSHELILSGLSMGSFGALYYGAQLNPQAIIVGKPLVNIGTIAEHMRLLRPEEFGTALDVLVSNEGDTSQASIQALNQKFWQTFQKKSLSQTVFAIAYMQHDDYDPHAFQELLPVLTAHQARVMNRSIPGRHNDDSPTIASWFVNFYNIILEDKFGRVQHAEKQNI
What is the function of this protein?
Part of the accessory SecA2/SecY2 system specifically required to export SraP, a serine-rich repeat cell wall protein encoded upstream in the same operon.
What are the official names of this protein?
Accessory Sec system protein Asp2, Accessory secretory protein Asp2.
What is the protein family that this protein belongs to?
Belongs to the accessory Sec system protein Asp2 family.
Protein: RL9_ALISL
Sequence: MQVILLDKIGNLGGLGDQVNVKAGYARNFLIPQGKVVMATKANVEMFETRRAELEANVAKQLAAAEARAESVNALEVTIASKSGDEGKLFGSIGNRDIADAATAAGVAIAKSEVRLPEGALRTTGSFEVSIQLHSEVFATLKLEVVAAE
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: RLMN_NATTJ
Sequence: MINHKQSLKDLTLNELQEYFSRKGWQQFRAKQIFDWMYIQQVDSIEVMSNIPKKLRQELMENCTINDLELDSNNIYTSPTDGTIKFLSVLKDGIGVETTIMKYDYGNTVCISSQAGCNMNCVFCASTTGGKERDLSPGEMIDQVLMANKVLPGSESINNIVVMGSGEPLENYQHLIKFLKIVNDGKGLNIGMRHITVSTCGLVPEIYNLAEEELQLNLAISLHAPNDELRNKLIPLNKIYPIHELLEACQVYFQKTGRRITFEYVLIKDFNDSIDLAKELSETLTALKMPVHVNLIPFNPVEETKFTAPPSSRISDFKNNLQSNNIGVTVRKERGVDVDGACGQLRSKVMR
What is the function of this protein?
Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.
What are the official names of this protein?
Probable dual-specificity RNA methyltransferase RlmN, 23S rRNA (adenine(2503)-C(2))-methyltransferase, 23S rRNA m2A2503 methyltransferase, Ribosomal RNA large subunit methyltransferase N, tRNA (adenine(37)-C(2))-methyltransferase, tRNA m2A37 methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily. RlmN family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NHAA_RICRS
Sequence: MNIKKLILPAAAALGGVVIPVLIYMFFNYGKPELIKGWAIPIATDTAFVLGILSFFSRHISLELRAFIIGFSLIDDAFALIILALFYAKTINTLALLISSIIIFILFILNYRQVKQLFYYIIVGLLLCISMVKSGIHDTLCRAIIALFIPVNIKGEFNTSFKKLENLIRPFVNYFILPLFVFMNSGILLEYFAFKGICSNSILALIYGIIFGLSVGKQLGIMLFSYPFVKFKLCNLPSDTSWLKFYSIAILRGIGFTLSLFIGSNV
What are the official names of this protein?
Putative Na(+)/H(+) antiporter NhaA homolog.
What is the protein family that this protein belongs to?
Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RSMH_SULNB
Sequence: METPHIPVLLEEVLESFSRVPEGYFVDCTLGYAGHSSEILKRYDHLKHIGIDRDDEALAFSKKRLEPFRDRSTLYKGTFATVLPTLKEAPVTALLADFGVSSLQLDKKERGFAFDSETLDMRMDANAPLSAYEVVNTYPKEKLEYIFDTYGEVRSYKKLASAVVDARAKAPIESAKALSEIAKGVIPPGGKIHPATLMFQAIRIEVNNELGEIEGLLDAIEAKHYEGEVVSLITFHSLEDRLVKNRFRKWSQECICDPHAIRCTCGKKHALGKALSRKPVTASKEELRVNPRSRSAKLRSFRFKSDS
What is the function of this protein?
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase H, 16S rRNA m(4)C1402 methyltransferase, rRNA (cytosine-N(4)-)-methyltransferase RsmH.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RsmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ALDH_ENCBU
Sequence: MSAPKIPEPVKDLKVEFTKIFINNEFVDSVSGKTFATINPSTGEKLAEVQEGDKADIDKAVAAARAAFKRDAEYRKHDASDRGRLLFKLADLIEAHRVQLRTLETLDNGKPFAMSYLGDTLMAQKVLRYYAGFADKIVGQTIPADGNVFCYTRHEPVGVVGAITPWNFPLHLAASKIAPAIAAGCTLVLKPAEQTPLTALYLASLVKQAGFPAGVINIVPGLGHTAGAALTNHPDINKITFTGSTEVGQLIIQGSGKTNLKRVTLELGGKSPNIIFPDSDLDYAVEVSHQAIMANMGQVCCAGSRTFVHEDIYEEFVRRSVERAKKRTVGDPFDPKNENGPQVDETQLKKILELIESGKTEGAKLECGGKRLGDKGYFVEPTVFTDVTSSMRVAKEEIFGPVQLIFKFKDVDEVIERANDTSYGLAAAVFTKNIDTALKVANSLEAGTVWVNTYNHFAFQAPFGGYKMSGQGREFGHYGLEAFLEVKTVYVRTPTKL
What is the function of this protein?
Could be indirectly involved in cadmium-detoxification, by lowering the intracellular concentrations of aldehydes.
What are the official names of this protein?
Aldehyde dehydrogenase, Aldehyde dehydrogenase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the aldehyde dehydrogenase family.
Protein: RL31_ACTPJ
Sequence: MKQGIHPEYTEITATCSCGNVIKTRSTVGKNLNLDVCGNCHPFYTGKQRVVDTGGRVERFNKRFSIPSTK
What is the function of this protein?
Binds the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L31.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
Protein: IF1_PSYIN
Sequence: MAKEDSIEMQGTIIDTLPNTMFRVELENGHIVTAHISGKMRKNYIRILTGDKVTVQLTPYDLSKGRIVFRAR
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds.  Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC).  Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
What are the official names of this protein?
Translation initiation factor IF-1.
What is the protein family that this protein belongs to?
Belongs to the IF-1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GCSPA_STAHJ
Sequence: MSHRYIPLTEKDKKEMLDKIGASSINELFGDVPKDILLNRDLNIASGEAETSLLRRLNTVANKNVTKETHASFLGAGVYDHYAPAVVDAMISRSEFYTAYTPYQPEISQGELQAIFEFQTLICELTDMDVANSSMYDGITSFAEACILAFNHTKKNKIVVSKGLHYQALQVLKTYVKVREEFEIVEVDLDGTITDLEKLEQAVDDETAAVAVQYPNFYGSVEDLEKIQSFIEGKKALFIVYANPLALGLLTPPGSFGADIVVGDTQPFGIPTQFGGPHCGYFATTKKLMRKVPGRLVGQTQDDEGNRGFVLTLQAREQHIRRDKATSNICSNQALNALASSIAMSALGKQGIYDIAVQNLEHANYAKNQFKDNGFEVLDGTSFNEFVVKFDQPIKDINKKLAKHGFIGGFDLGEASADFENHMLIAVTELRTKDEIDTFVKKAGELNGSK
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Probable glycine dehydrogenase (decarboxylating) subunit 1, Glycine cleavage system P-protein subunit 1, Glycine decarboxylase subunit 1, Glycine dehydrogenase (aminomethyl-transferring) subunit 1.
What is the protein family that this protein belongs to?
Belongs to the GcvP family. N-terminal subunit subfamily.
Protein: RASP_OCEIH
Sequence: MTTVVAFILMFGVLVSIHEWGHLIFAKRAGMLVREFAIGFGPKIFSFTKNETLYTIRLIPAGGYVRVAGEDPEIIELKPGHHIGLEFNQAGEVSKIIVNNKSKHPYARVIEVENVDLDHKLIIEGYELDDDENRLSFNVNEKAMFVMDERETQIAPYNRQFASKSTGKRAMQLFAGPMMNFVLAIAIFLILGIIQGVPVEEAKLGEIQPDTPAEQAGFQQDDVITQIGDQSISTWEEFTSIVRENPGQELDMVIQRNGESQDISVVPGEAEAVNEVGDPITIGQIGVYQGFEKDVLGTFVYGIERTYDTTTMIIQNLFMLVTGQVSIELLSGPVGIYDATDQVVQTGFSNFLLWTAMLSINLGIINLVPLPALDGGRLLFVGLEAVRGKPIAPEKEGIFHFVGFALLMLLMIVVTWNDIQRLFL
What is the function of this protein?
Is responsible for Site-2 cleavage of the RsiW anti-sigma factor.  This results, after a third proteolytic step catalyzed by the ClpXP protease, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity).
What are the official names of this protein?
Zinc metalloprotease RasP, Regulating alternative sigma factor protease, Regulating anti-sigma-W factor activity protease.
What is the protein family that this protein belongs to?
Belongs to the peptidase M50B family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: XYN_PHACE
Sequence: MQFLIPVVILCVSLVDSQKVLYNNEIGFNNGFYYAFWKDSGSATFTLESGGRYAGNWTTSTNNWVGGKGWNPGNSWRTVNYSGYYGINEYANSYLSLYGWTTNPLIEYYVVESYGSYSPLNCPGGTDEGSFTSGGATYQVRKCRRTNAPSIIGTQSFDQYFSVRTPKKGFGQVSGSVNFADHVQYWASKGLPLGTHAHQIFATEGYQSSGFADITVS
What are the official names of this protein?
Endo-1,4-beta-xylanase, Xylanase, 1,4-beta-D-xylan xylanohydrolase.
What is the protein family that this protein belongs to?
Belongs to the glycosyl hydrolase 11 (cellulase G) family.
What are the subcellular locations of this protein?
Secreted.
Protein: NANR_SALEP
Sequence: MDVMNAFDSQAEDSPTSLGRSLRRRPLARKKLSEMVEEELEQMIRRHEFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIISELSGMAKDFLTHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIALLTKALEINSQSLDDNALFIRSDVEFHRVLAEIPGNPIFMAIHVALLDWLIAARPSVPDRELHEHNNVSYQQHIVIVDAIRQRDPDKADRALQTHLNSVSATWHALGKKSQKMR
What is the function of this protein?
Transcriptional repressor that controls expression of the genes required for the catabolism of sialic acids.
What are the official names of this protein?
HTH-type transcriptional repressor NanR.
What is the protein family that this protein belongs to?
Belongs to the NanR family.
Protein: TBB_TETPY
Sequence: MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGNLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEEGEN
What is the function of this protein?
Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers.  Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms.  Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
What are the official names of this protein?
Tubulin beta chain, Beta-tubulin.
What is the protein family that this protein belongs to?
Belongs to the tubulin family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: SPXH_OCEIH
Sequence: MSWNQQELTSSNHTNTSPNFNYINYVQKPIEMYVFIDPLCAECWSLEPYIKKLSVEYGRFFTIRQIVSGQLSNLNVDVFEKPKKLKDIWERTAKRTGMSCDGDIWDENPIDYPYVPSLAIKAAELQGKKAGKMFVRKLQENLFINKENISEEKILLNCATEANLDLEEFERDLFSSSAKKALQCDLKLTREMEVDYIPTIVFFNQSVEEEGVKISGLYPYEIYKLVLKEILQKTPIPSSTPPLIDFLKHYQVVGTKEISVVYDWSLDKTEKEMKKLQFQQIVERIPAKYGSFWKYIDRSKTQDAAQR
What is the function of this protein?
Adapter protein required for efficient degradation of Spx by ClpXP under non-stress conditions.  Interaction with Spx stabilizes Spx and exposes the C-terminus of Spx for recognition and proteolysis by ClpXP.
What are the official names of this protein?
ClpXP adapter protein SpxH.
What is the protein family that this protein belongs to?
Belongs to the SpxH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: AROD_SHIDS
Sequence: MKTVTVKDLVIGAGAPKIIVSLMAKDIARVKSEALAYRETDFDILEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILHQA
What is the function of this protein?
Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids.  Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.
What are the official names of this protein?
3-dehydroquinate dehydratase, 3-dehydroquinase, Type I DHQase, Type I dehydroquinase, DHQ1.
What is the protein family that this protein belongs to?
Belongs to the type-I 3-dehydroquinase family.
Protein: LUXS_LISIN
Sequence: MAEKMNVESFNLDHTKVKAPFVRLAGTKVGVHGDEIYKYDVRFKQPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGCQTGFYMSFINHNDYDDALEILATTLTDVLAADSVPACNEVQCGWAASHSLEGAKELAEEFLAKRSEWKNVFGE
What is the function of this protein?
Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment.  The regulation of gene expression in response to changes in cell density is called quorum sensing.  Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).
What are the official names of this protein?
S-ribosylhomocysteine lyase, AI-2 synthesis protein, Autoinducer-2 production protein LuxS.
What is the protein family that this protein belongs to?
Belongs to the LuxS family.
Protein: RL29_TROW8
Sequence: MLGSKGLSPTDLRGMTDGHLRVELKNAKEEVFKLRFQSATGQLAHNARLRAVRRDIARIYTVMRERDIGIRSVQEEVSQ
What are the official names of this protein?
50S ribosomal protein L29.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL29 family.
Protein: NCAP_MABVA
Sequence: MDLHSLLELGTKPTAPHVRNKKVILFDTNHQVSICNQIIDAINSGIDLGDLLEGGLLTLCVEHYYNSDKDKFNTSPIAKYLRDAGYEFDVIKNADATRFLDVIPNEPHYSPLILALKTLESTESQRGRIGLFLSFCSLFLPKLVVGDRASIEKALRQVTVHQEQGIVTYPNHWLTTGHMKVIFGILRSSFILKFVLIHQGVNLVTGHDAYDSIISNSVGQTRFSGLLIVKTVLEFILQKTDSGVTLHPLVRTSKVKNEVASFKQALSNLARHGEYAPFARVLNLSGINNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAAHDAEVKLQRRHEHQEIQAIAEDDEERKILEQFHLQKTEITHSQTLAVLSQKREKLARLAAEIENNIVEDQGFKQSQNRVSQSFLNDPTPVEVTVQARPINRPTALPPPVDSKIEHESTEDSSSSSSFVDLNDPFALLNEDEDTLDDSVMIPSTTSREFQGIPEPPRQSQDIDNSQGKQEDESTNLIKKPFLRYQELPPVQEDDESEYTTDSQESIDQPGSDNEQGVDLPPPPLYAQEKRQDPIQHPAVSSQDPFGSIGDVNGDILEPIRSPSSPSAPQEDTRAREAYELSPDFTNYEDNQQNWPQRVVTKKGRTFLYPNDLLQTNPPESLITALVEEYQNPVSAKELQADWPDMSFDERRHVAMNL
What is the function of this protein?
Encapsidates the genome, protecting it from nucleases.  The encapsidated genomic RNA is termed the nucleocapsid and serves as template for transcription and replication.  During replication, encapsidation by NP is coupled to RNA synthesis and all replicative products are resistant to nucleases (By similarity).
What are the official names of this protein?
Nucleoprotein, Nucleocapsid protein.
What is the protein family that this protein belongs to?
Belongs to the filoviruses nucleoprotein family.
What are the subcellular locations of this protein?
Virion. Host cytoplasm.
Protein: RL7_YERP3
Sequence: MSTITKDQILEGVAALSVMEIVELISAMEEKFGVSAAAVAAGPAAAVEAAEEQTEFDVVLASFGENKVAVIKAVRGATGLGLKEAKDLVESAPAVLKEGVNKDEAETLKKSLEEAGASVEIK
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.  Is thus essential for accurate translation.
What are the official names of this protein?
50S ribosomal protein L7/L12.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL12 family.
Protein: HSPQ_ECOLC
Sequence: MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN
What is the function of this protein?
Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress.
What are the official names of this protein?
Heat shock protein HspQ.
What is the protein family that this protein belongs to?
Belongs to the HspQ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TNFA_CALJA
Sequence: MSTETMIQDVELAEEALPKTRGPQGSKRRLFLSLFSFLLVAGATALFCLLHFGVIGPQKDELSKDFSLISPLALAVRSSSRIPSDKPVAHVVANPQAEGQLQWLNRRANALLANGVELRDNQLVVPSEGLYLVYSQVLFKGQGCPSNFMLLTHSISRIAVSYQAKVNLLSAIKSPCQRETPQGAKTNPWYEPIYLGGVFQLEKGDRLSAEINLPDYLDLAESGQVYFGIIGL
What is the function of this protein?
The TNF intracellular domain (ICD) form induces IL12 production in dendritic cells.
What are the official names of this protein?
Tumor necrosis factor, Cachectin, TNF-alpha, Tumor necrosis factor ligand superfamily member 2, TNF-a.
What is the protein family that this protein belongs to?
Belongs to the tumor necrosis factor family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type II membrane protein. SUBCELLULAR LOCATION: [Tumor necrosis factor, membrane form]: Membrane; Single-pass type II membrane protein. SUBCELLULAR LOCATION: [Tumor necrosis factor, soluble form]: Secreted. SUBCELLULAR LOCATION: [C-domain 1]: Secreted. SUBCELLULAR LOCATION: [C-domain 2]: Secreted.
Protein: FAPR_STAA1
Sequence: MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
What is the function of this protein?
Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.
What are the official names of this protein?
Transcription factor FapR, Fatty acid and phospholipid biosynthesis regulator.
What is the protein family that this protein belongs to?
Belongs to the FapR family.
Protein: HIS4_BACCN
Sequence: MEILPAIDLKEGRCVRLYQGEFNKETVVNEHPVAQAMIFEKMGANRLHIVDLDGAVLGKSANLSTIEDICKAVRISVQAGGGIRSLSAVEMLLSIGVEKVILGTAALHNRSFLEEVIRLYGEKIIVGIDAKNGYVATRGWLDMSEISYIELAKQMEAVGVQTIIFTDISKDGTLMGPNFAQLQLLQEEVSLRIIASGGISSLQDVEQLQAMNMYGVIIGKALYEKTMDLQEVLRVTKSC
What are the official names of this protein?
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL17_ORITI
Sequence: MRHRVSGRKLNRTTSHLLAMLANMSVSLIQHEQINTTLPKAKELRPFVEKLITVAKKGNLNARRYLISKIKNELAVEKLMTTLAPRYAERHGGYIRILKAGFRYGDMAPMAYIEFVDRNIESKGKEFKALKNDSRNAKLIAEQSN
What are the official names of this protein?
50S ribosomal protein L17.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL17 family.
Protein: RBL_ARAHI
Sequence: MSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAVEGNEIIREACKWSPELAAACEVWKEIRFNFPTVDKLDGQE
What is the function of this protein?
RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process.  Both reactions occur simultaneously and in competition at the same active site.
What are the official names of this protein?
Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit.
What is the protein family that this protein belongs to?
Belongs to the RuBisCO large chain family. Type I subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: Y1581_XYLFA
Sequence: MRLGMLDLRPIFRNSKLAQRVQVLRRQGQYLPDGTWQQESVLDTVLAIIHPTTPDDLQLLPEGERHHPSKKIMSQDQIDVGDVLLYQDTRWRITQLSNWSEYGYYRGIAVGHDGTAQPAAAAFVTT
What are the official names of this protein?
Uncharacterized protein XF_1581/XF_1686.
Protein: SYDP_AERS4
Sequence: MSDQVLSALEHFFLRWQRDGEARRGLPLCEWEADWRSPCELDEPREGRVAWRPHQRQQAADFAAMANALELVLHPAAQALFGHWFSRPIPCSYKGLRLEIILPWNEADLNLLRENLIGHLLMLRKLKRTPSLFIATTRNEMTLVSLDNESGQVWLEWLDSGRRLTLAPSLPAFLERLETLPH
What is the function of this protein?
Interacts with the SecY protein in vivo.  May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function.
What are the official names of this protein?
Protein Syd.
What is the protein family that this protein belongs to?
Belongs to the Syd family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Note=Loosely associated with the cytoplasmic side of the inner membrane, probably via SecY.