PharMolix/UniProtQA huggingface dataset:
Protein: DUT_TREDE
Sequence: MEVFTKLKEGALLPEYKTSGSAGADLRALIEEPIILKPMQRCLIPTGLSVELPKGIELQVRPRSGLALKHGITVLNTPGTVDSDYRGELAVLLINLGNEDFKIENGDRIAQAVIAQAIQADFLQKDELSNTERGAGGYGSTGIA
What is the function of this protein?
This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
What are the official names of this protein?
Deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTPase, dUTP pyrophosphatase.
What is the protein family that this protein belongs to?
Belongs to the dUTPase family.
Protein: RS8_SYNJA
Sequence: MAHTNDTIADMLTRIRNATMARHESVAVPATRMTRSIARVLHEEGFVSDWKEEGEGIHAQLVLRLKYKGKGRKPIINGLKRVSRPGLRVYCNHKELPRVLGGIGIAIISTSNGIMTDRDARKQGIGGEVLCYVY
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.
Protein: PSBY_ARATH
Sequence: MAAAMATATKCMSLNPSPPKLQNQTKSKPFISLPTPPKPNVSLAVTSTALAGAVFSSLSYSEPALAIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESKGIVVGLGIGGGLAASGLLTPPPEAYAAAEAAAASSDSRGQLLLIVVTPALLWVLYNILQPALNQINKMRSGD
What is the function of this protein?
PSBY-1 and -2 are manganese-binding polypeptides with L-arginine metabolizing enzyme activity.  They are a component of the core of photosystem II.
What are the official names of this protein?
Photosystem II core complex proteins psbY, chloroplastic, L-arginine-metabolizing enzyme, L-AME.
What is the protein family that this protein belongs to?
Belongs to the PsbY family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi- pass membrane protein.
Protein: VE2_BPV2
Sequence: METACERLHVAQETQMQLIEKASDKLQDHILYWTAVRTENTLLYAARKKGVTVLGHCRVPHSVVCQERAKQAIEMQLSLQELSKTEFGNEPWCLLDTSWDRYMSEPKRCFKKGARVVEVEFDGNASNTNWYTVYSKLYMRTEDGWQLAKAGADGTGLYYCTMAGAGRIYYSRFGEEAARFSTTGHYSVRDQDRVYAGVSSTSSDFRDRPDGVSASEGPEGDPAGKEAEPAQPVSSLLGSPACVPIRAGLGWVRDGPRPHPYHFPAGSGGSLLRSASTPVQGPVPVDLAPRQEEEENQSPDSTEEEPVTVPRHTSDADGFHLLKAGQSCFALISGSANQVKCYRFRVKKNHRHRYENCTTTSFTVADNGAERQGQAQILITFGSPGQRQDFLKHVPLPPGMNISGFTASLDF
What is the function of this protein?
Plays a role in the initiation of viral DNA replication.  A dimer of E2 interacts with a dimer of E1 in order to improve specificity of E1 DNA binding activity.  Once the complex recognizes and binds DNA at specific sites, the E2 dimer is removed from DNA.  E2 also regulates viral transcription through binding to the E2RE response element (5'-ACCNNNNNNGGT-3') present in multiple copies in the regulatory regions of the viral genome.  Activates or represses transcription depending on E2RE's position with regards to proximal promoter elements including the TATA-box.  Repression occurs by sterically hindering the assembly of the transcription initiation complex.
What are the official names of this protein?
Regulatory protein E2.
What is the protein family that this protein belongs to?
Belongs to the papillomaviridae E2 protein family.
What are the subcellular locations of this protein?
Host nucleus.
Protein: PLSX_VIBPA
Sequence: MQSITVALDAMGGDFGPRVTVPAAVQALSHFPELKVILIGDQSLITSQLSQLGTSTSSRLTILHSEKVISNSEKPSLALRNSQNSSMRMAIDLVSDQEADACVSGGNTGALMALSRFILKLLPGIERPALVSALPTISGKRTWMLDLGANVSCDADSLFQFAVMGSALAEEHLCRPPRVAVLNIGAEEIKGNDLVKRCAEMLSQTDAINFVGYIEGNQILHDVADVIVCDGFVGNVCLKASEGTAQLFIEKLKTSMMASTIKGWIARKLFSRLFNELKTLNPDQYNGASLLGLRGIVIKSHGSADVSAIVNALGEAVHEVKRQVPSRISDRLEAVLLERHY
What is the function of this protein?
Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP).  This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
What are the official names of this protein?
Phosphate acyltransferase, Acyl-ACP phosphotransacylase, Acyl-[acyl-carrier-protein]--phosphate acyltransferase, Phosphate-acyl-ACP acyltransferase.
What is the protein family that this protein belongs to?
Belongs to the PlsX family.
What are the subcellular locations of this protein?
Cytoplasm. Note=Associated with the membrane possibly through PlsY.
Protein: RWDD3_BOVIN
Sequence: MAEPVRQELSALAAIFCGPDEWEVLSLSETDGAVFRILTKAEGFMDTDIPLQLVFHLPLSYPYCLPGIVVNSKHLTRAQCEIVKEKLLEQAETLLLEPMVHELVLWIQENLRHILKCPEAGGGSEKCSSAASMTVDDGLWMTLLHLDHMRAKAKYVKTVEKWASDLRLTGRLMFMGKIILILLQGDRNDIKEYLILQKTCKVDVDSSGKKCKEKMISVLFETKVQTEHKRFLAFEVKEYSSLDELQKEFETTGLKKLFSECVLRLVK
What is the function of this protein?
Enhancer of SUMO conjugation.  Via its interaction with UBE2I/UBC9, increases SUMO conjugation to proteins by promoting the: binding of E1 and E2 enzymes, thioester linkage between SUMO and UBE2I/UBC9 and transfer of SUMO to specific target proteins which include HIF1A, PIAS, NFKBIA, NR3C1 and TOP1.  Positively regulates the NF-kappa-B signaling pathway by enhancing the sumoylation of NF-kappa-B inhibitor alpha (NFKBIA), promoting its stabilization which consequently leads to an increased inhibition of NF-kappa-B transcriptional activity.  Negatively regulates the hypoxia-inducible factor-1 alpha (HIF1A) signaling pathway by increasing the sumoylation of HIF1A, promoting its stabilization, transcriptional activity and the expression of its target gene VEGFA during hypoxia.  Has no effect on ubiquitination (By similarity).
What are the official names of this protein?
RWD domain-containing protein 3.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm. Note=Colocalizes with UBC9/UBE2I in nuclear spots.
Protein: JAL17_ARATH
Sequence: MAQRLEAEGNKNFKGKSKWDDGSDKDDIGKISVRCEDGGITYIRFDYIKSGQPQYNTFPGNPGRGILQTFDINHKNDEHLESVEGYYDPKSDAIKGLQFKTNMRISELIGYANDGATKFSLAVEGKKIIGFHGAYNTYLNSLGAYVTWIVPTKLKAKGGKGGKEWNDGADHEGITKIYVRGGYEGLQYVKFDYIKDGQQIYGSPHGVRGRGFTELFEINHLDKEYLISVEGYYDEGESGVIQGIQFKTNIRTSELMGDNRGRKFSLAANGKKIIGFHGYAEKNLNSLGAYFTTSPFTKLEVGTTSADLWDDGTFDGIRNVYIHYDGDAVCCVEVDYDNKGKVEKREHGIMIAPFIERGEFVVDYPNEFITSVEVTISKQNDSPVPSLTSETVASLTFKTSKGRTSSTFGSPATKKFVLQSKGCGVVGFLGRSSYYTYALGAHFCPLPPLPDGEKVEAKGGDGGASWDDGRFDCIRKIYIGHSEMGIAFVKFLYDKDNKVVVGDDHGSKTLLGVDEFELEHPDEYLISVEGSYDVVDGSESEVIRMLRFKTNMRTSQLFGHETTSNFTLQKECHKIVGFHGKIGEMLHQIGVHVLPITD
What are the official names of this protein?
Jacalin-related lectin 17.
What is the protein family that this protein belongs to?
Belongs to the jacalin lectin family.
Protein: TX1A_TRICU
Sequence: MIYQVVLLLLVSPAPVSAAGCNPDCTGIQCGWPRCPGGQNPVMDKCVSCCPFCPPKSAQG
What is the function of this protein?
Insect-specific toxin.  Blocks voltage-gated potassium and sodium channels.
What are the official names of this protein?
Insect toxin mu-NPTX-Nc1a, Mu/kappa-nephilitoxin-Nc1a, Mu/kappa-NPTX-Nc1a.
What are the subcellular locations of this protein?
Secreted.
Protein: HBA_AMMLE
Sequence: MVLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGEKVAAALTKAVGHLDDLPGTLSDLSDLHAHKLRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSKYR
What is the function of this protein?
Involved in oxygen transport from the lung to the various peripheral tissues.
What are the official names of this protein?
Hemoglobin subunit alpha-1/2, Alpha-1/2-globin, Hemoglobin alpha-1/2 chain.
What is the protein family that this protein belongs to?
Belongs to the globin family.
Protein: ASPG_DEIRA
Sequence: MPASLPRLALIHTGGTIASRPSPDGRGLTPQTPPALPGLEGVQVSEHQPFNLPSPHVTPAHMQQLAHLIEQLAGGHDAVVVTHGTDTLEETAFFLHLCLPAGLPVVLTGSMRHAEEVSWDGPGNLLDAAQVALCPQTAGRGPLVVFGGDIFDARTVTKVHTSAVDAFGGYPGPIGRIDRTAAGPQVHYFARPEPRPTFRPVTLERRVEILYAYAGWQGEGYAGALERADGLVIAALGTGNLPPELLPLIAATDKPVVLATRTHAGPILPVYGYAGGGATLVEAGAIPASFLNAHKARLLLLVLLNLGASREDIRRVFTQGVF
What are the official names of this protein?
Probable L-asparaginase, L-ASNase, L-asparagine amidohydrolase.
What is the protein family that this protein belongs to?
Belongs to the asparaginase 1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMG_XANOM
Sequence: MNDAALAPDVSAALERGLQAQSLDTAFAAPLLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYIASGMLADLGTGPGLPGIPLAITRPQLQVTLVESNGKKVRFMREALRHLELRNARVAESRAEALDEPTAYDHLTARALDKLAGIIAVGGHLLRPGGSLLAMKGIYPHEEIAALPEGWTMSEVHQLQVPGLDGERHLVVVRKA
What is the function of this protein?
Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase G, 16S rRNA 7-methylguanosine methyltransferase, 16S rRNA m7G methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUVB_BURCE
Sequence: MIETDKLAAERIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSAALLNAQIDPNGALEIAKRSRGTPRIANRLLRRVRDYAEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILHKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLSAPAAGSAEGSMWNTPDGA
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time.  Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange.  Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration.  The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration.  Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvB.
What is the protein family that this protein belongs to?
Belongs to the RuvB family.
Protein: NAPA_SACD2
Sequence: MTVTRRDFVRHQALATAAAAAGVAVPAAATNIVTTAADNKLVWSKAPCRFCGTGCSVNVATKEGRVVATHGDIKSPVNRGLNCVKGYFLSKVMYGEDRLTQPLLRKKNGVYAKDGEFEPVTWEEAFTIMAEKFKKTLKEKGPEGIGMFGSGQWTVWEGYAASKLMKAGFRSNNIDPNARHCMASAVGGFMRTFGIDEPMGCYDDFEHADAFVLWGSNMAEMHPILWTRIADRRLSYPHVQVAVMSTYEHRSFDLADLGVVFTPQSDLAIANFIANYIIQNKKVNWDFVKKHTNFRVGTTDIGYGLRPEHPLQKAAKNADSAGASEPIDFETYAKFVADYTVEKASEISGVSEDKLIKLAKLYADPNIKVMSLWTMGVNQHTRGVWMNNLIYNIHLLTGKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKHRAYAEKIWKLPEGSIPEKVGAHAVLQSRKLKDGEINAYWVQVNNNVQAGPNINEEVLPGYRNPQNFIVVSDAYPTVTAQAADLILPSAMWVEKEGAYGNAERRTQFWHQLVNAPGDARSDLWQLVEFSKYFKVEEVWPADLIAKMPEAKGKTLFDILYKNGKVNKFPLAQVSKDYENKEADAFGFYIQKGLFEEYAEFGRGHGHDLADFDRYHEERGLRWPVVNGEETLWRYREGSDPYVEKGKGVQFYGKPDGKAIIFALPYEPPAESPNKEYPFWLCTGRVIEHWHSGSMTQRVPELYKAFPDAVCFMHPEDARSAGLRRGDKVKLQSIRGHIITRIETRGRNKPPKGLVFVPWFDARQLINKVTLDATDPISKQTDFKKCAVKVERV
What is the function of this protein?
Catalytic subunit of the periplasmic nitrate reductase complex NapAB.  Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
What are the official names of this protein?
Periplasmic nitrate reductase.
What is the protein family that this protein belongs to?
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
What are the subcellular locations of this protein?
Periplasm.
Protein: YGFZ_YERPA
Sequence: MAYHTPFAAQPPVASSGLPLTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYRGEGLAFIERRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELPSAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQFNDSKQWLALDIEAGFPIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGNASRVPAAGEDLEWQLGENWRRTGTVLSAIQLNDGTVWVQAVLNNDLAADSVLRVRDDALGTLAIQPLPYSLAEDK
What is the function of this protein?
Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs.  It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication.
What are the official names of this protein?
tRNA-modifying protein YgfZ.
What is the protein family that this protein belongs to?
Belongs to the tRNA-modifying YgfZ family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ISTB_PSEFL
Sequence: MMTQHTLSQLHQLRLGGMARALEEQWTLPASHSLSFDERLGLLLDRELAWRDDKRLERLRKQAKLKYASACLEDLDRRRGRTLDERLIATLASGDWIRQRHNLLLTGPTGVGKTWFACALGHQACRQGYSALYLRTPRLLEQLRIAHGDGSFGRTLQQLAKVDVLILDDWGLAALEENARHDLLEVIDDRAGSRSTILTSQLPSSTGTAGSTTPRWPTPCSIAWYTTPTES
What are the official names of this protein?
Insertion sequence IS1162 putative ATP-binding protein.
What is the protein family that this protein belongs to?
Belongs to the IS21/IS1162 putative ATP-binding protein family.
Protein: ATPF_SHEFN
Sequence: MNFNATLFGQTVAFILFVWFCMKFVWPPLMNAIEERQKKIADGLADAGRAAKDLELAQIKATEQLKEAKVTANEIIEQANKRKAQIVEEAKVEAQTERAKIIAQGQAEIENERNRVKDDLRKQVALLAIAGAEKILERTIDPEAHSDIVNKLVAEI
What is the function of this protein?
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
What are the official names of this protein?
ATP synthase subunit b, ATP synthase F(0) sector subunit b, ATPase subunit I, F-type ATPase subunit b, F-ATPase subunit b.
What is the protein family that this protein belongs to?
Belongs to the ATPase B chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: Y1888_HALH5
Sequence: MPPMKDSSNSTPRTDEELQEVTVGELKPHNASITLLEYDPRWPKLFDREAKRIRSVLGNKALQVEHVGSTSVPGLCAKPIIDILLVVTDSADETTYVPDLEKVGYTLRIREPDWFEHRVFKGPDTDINLHVFSKGTSEIDRMLRFRDWLRANNSDRDNYARVKRKLAQHEWRQVQHYADAKSSIVQEIMKRANAT
What are the official names of this protein?
UPF0157 protein BH1888.
What is the protein family that this protein belongs to?
Belongs to the UPF0157 (GrpB) family.
Protein: ADF_VITVI
Sequence: MSFRGLNASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLRERAH
What is the function of this protein?
Actin-depolymerizing protein.  Severs actin filaments (F-actin) and binds to actin monomers (By similarity).
What are the official names of this protein?
Actin-depolymerizing factor, ADF.
What is the protein family that this protein belongs to?
Belongs to the actin-binding proteins ADF family.
Protein: RL9_SYNS3
Sequence: MAKRVQVVLNEDILSLGRNGDLVDVAPGYARNFLLPFGKAVPVTPAVMKQVEHRRAKEAERQATLKQDAVAFRTALDTIGRFTVKKQTGGDDVLFGTVTNGDVAEAIESATKKEVDRRDITVPDIHRTGSYKVQVKLHSEVTAEINLEVVSY
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: RL22_PSEA6
Sequence: MEALATHRHARTSAQKARLVADQIRGLHVEKALELLAYSPKKSADLIKKVLESAIANAEHNEGADIDELTVSKVFVDEGPTMKRIKPRAKGRADRIFKRSSHITVVVADN
What is the function of this protein?
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L22.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: RBL_CYAPA
Sequence: MSSQARTQTRAGFKAGVKDYRLTYYTPEYTPKETDILAAFRMTPQPGVPPEECAAAVAAESSTGTWTTVWTDGLTSLDRYKGRSYGFEPVPGEENQYICYVAYPLDLFEEGSVTNMLTSIVGNVFGFKALRALRLEDLRIPVGYSKTFQGPPHGITVERDKLNKYGRALLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLYVMDAIKKSQAETGEIKGHYLNATAPTTEEMIKRAEFAAELDAPIIMHDYITAGFTSNTTLARWCRDNGPLLHIHRAMHAVIDRQKNHGIHFRVLAKTLRMSGGDHLHSGTVVGKLEGDRAGTLGFVDLMRDDHIEQDRSRGIFFTQDWASMPGVMPVASGGIHIWHMPALVDIFGDDSCLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRNLAREGNEIIREAARFSPELAAACEVWKEIKFEFETIDTI
What is the function of this protein?
RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process.  Both reactions occur simultaneously and in competition at the same active site.
What are the official names of this protein?
Ribulose bisphosphate carboxylase large chain, RuBisCO large subunit.
What is the protein family that this protein belongs to?
Belongs to the RuBisCO large chain family. Type I subfamily.
What are the subcellular locations of this protein?
Plastid, cyanelle.
Protein: NILP3_ARATH
Sequence: MKSAISSSLFFNSKNLLNPNPLSRFISLKSNFLPKLSPRSITSHTLKLPSSSTSALRSISSSMASSFNPEQARVPSALPLPAPPLTKFNIGLCQLSVTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYSNDSFPVYAEEIDAGGDASPSTAMLSEVSKRLKITIIGGSIPERVGDRLYNTCCVFGSDGELKAKHRKIHLFDIDIPGKITFMESKTLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDSGAGYTAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTSLPLNRQRRGDLYQLVDVQRLDSK
What is the function of this protein?
Omega-amidase involved in the metabolism of asparagine.  Probably also closely coupled with glutamine transamination in the methionine salvage cycle.  Can use alpha-ketosuccinamate and alpha-hydroxysuccinamate as substrates, producing respectively oxaloacetate and malate, or alpha-ketoglutaramate, producing alpha-ketoglutarate.
What are the official names of this protein?
Omega-amidase, chloroplastic, Nitrilase-like protein 3.
What is the protein family that this protein belongs to?
Belongs to the nitrilase superfamily. NIT1/NIT2 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: SYD_MESFL
Sequence: MKRTHNCNQLNISNVNQEVTLKGWIKKIRKMGQITFIDLRDFYGITQIVVGENKQELINNLKPEYVISITGKVIERKSKNADIPTGEIEIEVKNIELINKSELTPFVIENDVEVSEETRMSYRYLDLRRQKIQNNMLLRAKVNSIIRKEFEADNFVEVETPYFGKSTPEGARDFLVPSRLNKNTFYALPQSPQLYKQLLMVSGFDKYYQIVRCFRDEDLRNDRQPEFTQLDMEMSFASATEVQDQIEKVIKKIFLEVKGIDFKEKLIKMPFREAIDLYGSDKPDIRFDLKINTLNEIFDKTQIKLFESFKENKLSIRGICVEELLSKKQLEILTETAKQKSFNNLAFAKFENGTWSGSIASSLSDGEKQALIKQFNIKDKATILLNVGKYEKISDMLGAVRNKVAEILNLADPNDYKLLWIIDFPLYEWSDEESRYVAAHNPFTMPNIKSIDDFETNKEDAIADSYDLVLNGFELGSGGVRITDSGIQQRMFEAVGLDDETIEKNFGWFINAYKYGAPNHAGFAFGIDRVIMLLTHSESIRDVIAFPKNSKGIDMMNDAPSYVEDNQLSELSIKTIK
What is the function of this protein?
Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).
What are the official names of this protein?
Aspartate--tRNA ligase, Aspartyl-tRNA synthetase, AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RSMA_LISMC
Sequence: MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNIQVVHGDVLKADVEEVIAEQFAKPDLPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK
What is the function of this protein?
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle.  May play a critical role in biogenesis of 30S subunits.
What are the official names of this protein?
Ribosomal RNA small subunit methyltransferase A, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase, 16S rRNA dimethyladenosine transferase, 16S rRNA dimethylase, S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MPK9_ARATH
Sequence: MDPHKKVALETEFFTEYGEASRYQIQEVIGKGSYGVVASAIDTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHVMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANSDCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDIMTDLLGTPPPEAIARIRNEKARRYLGNMRRKPPVPFTHKFPHVDPLALRLLHRLLAFDPKDRPSAEEALADPYFYGLANVDREPSTQPIPKLEFEFERRKITKEDVRELIYREILEYHPQMLQEYLRGGEQTSFMYPSGVDRFKRQFAHLEENYGKGEKGSPLQRQHASLPRERVPAPKKENGSHNHDIENRSIASLVTTLESPPTSQHEGSDYRNGTSQTGYSARSLLKSASISASKCIGMKPRNKSEYGESNNDTVDALSQKVAALHT
What are the official names of this protein?
Mitogen-activated protein kinase 9, AtMPK9, MAP kinase 9.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
Protein: RLMH_THEMA
Sequence: MRVRIAVIGKLDGFIKEGIKHYEKFLRRFCKPEVLEIKRVHRGSIEEIVRKETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKGKDITILIGGPYGLNEEIFAKAHRVFSLSKMTFTHGMTVLIVLEQIFRAFKIIHGENYHY
What is the function of this protein?
Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase H, 23S rRNA (pseudouridine1915-N3)-methyltransferase, 23S rRNA m3Psi1915 methyltransferase, rRNA (pseudouridine-N3-)-methyltransferase RlmH.
What is the protein family that this protein belongs to?
Belongs to the RNA methyltransferase RlmH family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YMJC_ECOLI
Sequence: MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNKMQTTSGKKVIQDR
What are the official names of this protein?
Protein YmjC.
Protein: TATA_AROAE
Sequence: MGSFSIWHWLIVLVIVVLVFGTKKLRNVGQDLGGAVKGFKDGMRDSEKSGEDVQQKIGGDTLDAQATDKSHTVSH
What is the function of this protein?
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes.  TatA could form the protein-conducting channel of the Tat system.
What are the official names of this protein?
Sec-independent protein translocase protein TatA.
What is the protein family that this protein belongs to?
Belongs to the TatA/E family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: RBS_TRIRP
Sequence: MALISSAAVTTINRAPVQANLATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKVY
What is the function of this protein?
RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate.  Both reactions occur simultaneously and in competition at the same active site.  Although the small subunit is not catalytic it is essential for maximal activity.
What are the official names of this protein?
Ribulose bisphosphate carboxylase small subunit, chloroplastic, RuBisCO small subunit.
What is the protein family that this protein belongs to?
Belongs to the RuBisCO small chain family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: YGFZ_YERPY
Sequence: MAYHTPFAAQPPVASSGLPLTLISLDDWALVTLTGADRVKYLQGQVTADIDALSADQHVLCAHCDAKGKMWSNLRLFYRGEGLAFIERRSLLDNQLSELKKYAVFSKVVIEPQPDAVLIGVAGSQAKTALAEIFTELPSAEHPVTQMGNSTLLHFSLPAERFLLVTDTEQAQQLVEKLAGRAQFNDSKQWLALDIEAGFPIIDAANSAQFIPQATNIQALNGISFTKGCYTGQEMVARAKYRGANKRALYWLAGNASRVPAAGEDLEWQLGENWRRTGTVLSAIQLNDGTVWVQAVLNNDLAADSVLRVRDDALGTLAIQPLPYSLAEDK
What is the function of this protein?
Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs.  It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication.
What are the official names of this protein?
tRNA-modifying protein YgfZ.
What is the protein family that this protein belongs to?
Belongs to the tRNA-modifying YgfZ family.
What are the subcellular locations of this protein?
Cytoplasm.