PharMolix/UniProtQA huggingface dataset:
Protein: PCNA_METM7
Sequence: MFRATCNTRDFKKVINATSNLVDEICFEVDENGIKASAMDPSHVALVSMEMPKDVFEEYEGDIQDIGIDLEALKKIIARGRGDEKLILDLDTEKNKLNVTFKSNVTRKFSIALYDVSSSNLKVPDIEYPNSVSIKAGAFVEALKDAELVNDHITLKIDEDKFIIYSKGDLNQSETVFDNSIEDDDNALAEFNMGEASRSTFNLAYLKDLTKSTAAEDLLKIYLGSDMPVKIEYEVSGSKLVFLLAPRIES
What is the function of this protein?
Sliding clamp subunit that acts as a moving platform for DNA processing.  Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
What are the official names of this protein?
DNA polymerase sliding clamp, Proliferating cell nuclear antigen homolog, PCNA.
What is the protein family that this protein belongs to?
Belongs to the PCNA family.
Protein: G3OX2_ORYSJ
Sequence: MPTPSHLKNPLCFDFRAARRVPETHAWPGLDDHPVVDGGGGGGEDAVPVVDVGAGDAAARVARAAEQWGAFLLVGHGVPAALLSRVEERVARVFSLPASEKMRAVRGPGEPCGYGSPPISSFFSKLMWSEGYTFSPSSLRSELRRLWPKSGDDYLLFCDVMEEFHKEMRRLADELLRLFLRALGLTGEEVAGVEAERRIGERMTATVHLNWYPRCPEPRRALGLIAHTDSGFFTFVLQSLVPGLQLFRRGPDRWVAVPAVAGAFVVNVGDLFHILTNGRFHSVYHRAVVNRDRDRVSLGYFLGPPPDAEVAPLPEAVPAGRSPAYRAVTWPEYMAVRKKAFATGGSALKMVSTDAAAAADEHDDVAAAADVHA
What is the function of this protein?
Catalyzes the 3-beta-hydroxylation of the inactive gibberellin precursors, leading to the formation of bioactive gibberellins.  In vitro, converts the precursors GA20, GA5, GA44 and GA9 to the corresponding 3-beta-hydroxylated active products GA1, GA3, GA38 and GA4, respectively.  Involved in the production of bioactive GA for vegetative growth and development (PubMed:11438692).  Controls the elongation of the vegetative shoot and plant height by the regulation of active gibberellin levels (Ref. 7).
What are the official names of this protein?
Gibberellin 3-beta-dioxygenase 2, GA 3-oxidase 2, OsGA3ox2, Gibberellin 3 beta-hydroxylase 2, Protein DWARF18.
What is the protein family that this protein belongs to?
Belongs to the iron/ascorbate-dependent oxidoreductase family.
Protein: CRK_DAUCA
Sequence: MGICVSKPSPEPDLHNHHTSIPVNDTSLPPQDNSIPPKDIAIPAQDNNKPPGKKSPFLPFYSPSPAHFLFSKKSPAVGSPAAGSSNSTPKRLFPFPPPSPAKHIKAAWARRHGSVKPNEAAIPENNEVDGGAGLDKSFGFSKKFGSKFEVGEEVGRGHFGYTCRAKFKKGEFKGQDVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLVQFYDAFEDHTNVYVVMELCEGGELLDRILSRGGKYTEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFKSKDEDSQLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWARTESGIFRAVLKANLSFDEPPWPSVSSEAKDFVKRLLNKDPRKRMTAAQALCHSWIKNSNDIKFPLDILVFKLMKVYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPTKNGTISLENIKQALMRNSTDAMKDSRVLDLLVSLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYDLFEKDGNRAIMIEELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGYVKLLHGVSTRAIAKAQ
What are the official names of this protein?
CDPK-related protein kinase, PK421.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.
Protein: SSRP_SULNB
Sequence: MAINIVAQNKKARHDYEILEKFEAGIVLSGAEVKALRAKRANLSDAFCRFIKGELYLMNAHIAHLETANKYFTPDTRAPRKLLLHKKELEKLYVKVHKDGLTIVPLMIYFNERNYAKVSIAIAKGKKLHDKRADMKAKTLDREAKTAMKNRSY
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: PCDGK_PANTR
Sequence: MVPEAWRSGLVSTGRVVGVLLLLGALNKASTVIHYEIPEEREKGFAVGNVVANLGLDLGSLSARRFRVVSGASRRFFEVNRETGEMFVNDRLDREELCGTLPSCTVTLELVVENPLELFSVEVVIQDINDNNPAFPTQEMKLEISEAVAPGTRFPLESAHDPDVGSNSLQTYELSRNEYFALRVQTREDSTKYAELVLERALDREREPSLQLVLTALDGGTPALSASLPIHIKVLDANDNAPVFNQSLYRARVLEDAPSGTRVVQVLATDLDEGPNGEIIYSFGSHNRAGVRELFALDLVTGMLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVVDVNDNAPEITVTSVYSPVPEDAPLGTVIALLSVTDLDAGENGLVTCEVPPGLPFSLTSSLKNYFTLKTSADLDRETVPEYNLSITARDAGTPSLSALTIVRVQVSDINDNPPQSSQSSYDVYIEENNLPGAPILNLSVWDPDAPQNARLSFFLLEQGAETGLVGRYFTINRDNGIVSSLVPLDYEDRREFELTAHISDGGTPVLATNISVNIFVTDRNDNAPQVLYPRPGGSSVEMLPRGTSAGHLVSRVVGWDADAGHNAWLSYSLLGSPNQSLFAIGLHTGQISTARPVQDTDSPRQTLTVLIKDNGEPSLSTTATLTVSVTEDSPEARAEFPSGSAPREQNKNLTFYLLLSLILVSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGPSLHADAVRGGLMSPHLYHQVYLTTDSRRSDPLLKKPGAASPLASRQNTLRSCDPVFYRQVLGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
What is the function of this protein?
Potential calcium-dependent cell-adhesion protein.  May be involved in the establishment and maintenance of specific neuronal connections in the brain.
What are the official names of this protein?
Protocadherin gamma-C3, PCDH-gamma-C3.
What are the subcellular locations of this protein?
Cell membrane; Single-pass type I membrane protein.
Protein: RL9_CHLT2
Sequence: MKPQLLLLEDVDGLGRSGDLVVAKPGYVRNYLLPKGKAVVASAGTLRLQAKLQEQRLLQAAADKEESLRLAEMLRSIVLDFQVRVDSENNMYGSVTVNDMISAAEQQGVVLTRKNFPRSHSGIKNLGRHVVGLKLKEGVTADLHLEVRADHEIIEQKELQSAEEQEG
What is the function of this protein?
Binds to the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L9.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL9 family.
Protein: KTHY_PECCP
Sequence: MNSKFIVIEGLEGAGKTTARHIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMTDEKVTDKAEVLMLYAARVQLVDNVIKPALANGQWVIGDRHDLSSQAYQGGGRGIDQQLLRSLRDTVLGDFRPDLTLYLDLPPAIGLQRARARGELDRIEQESLAFFERTRSRYQELAAEDDSILTIDASQSIEAVSADIQAALQQWLQQQGLLAVVQEPR
What is the function of this protein?
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.
What are the official names of this protein?
Thymidylate kinase, dTMP kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate kinase family.
Protein: EX7S_NITEU
Sequence: MRKKSSSNKEETALHPPPENFETATAELEQIVAGMETGQMSLEDALSAYKRGVELLQYCQNILKNSQQQIKILEADMLKHFSPAEHDAS
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UBP45_DANRE
Sequence: MRLKDPFSLKTADMTKRSNKPKKPRDEDSSDEVGGLTCQHVSRAVDLSSVKKAVTGSLWSVCSDCLKERNVLEGETAGAHDILVCLKCGFQGCNQAEVQHSTKHQQAHHSDSHCITISLTTWKAWCFECKEELSTHCNKKALAQTLDFLQKQSAKATSGTSSKLIKLREEPAEYVDTQRGKSPVNSTLIPVKGINNLGNTCFFNAVMQNLSQTHMLNDLIQDVKEKGHKMKISPSTETNLGSLTVTLPSPEPLTSAMFLFLQSMKESGKGPVSPKILFNQLCQKAPRFKGYQQQDSQELLHYLLDSMRVEETKRIKAGILKAFNNPTEKTADEETKRQVKAYGKEGVKLNFVDRIFVGELTSTIMCEECEHISTVKEAFIDISLPIIEERISKPTNPARLGKSGREQDSLTSHDDSLAAHSQANRNSRRLSGQKLQSRHSSTSHDDRGPDTVSSRQEEDLCVAGRGLSSYRTDTMGSQSDCSEKESNLQDSSNDADSEASESEWSPRIPSVSSHSSTSDKTSITTTLSTTTHNPSLKSNPSSTPLPSIRPQQGGAVEQLVSAVSKLGLVHTSTDTLPISHSQEELSETRDRDRQHHQGAFQVLCHSYTPSSKECSVQSCLHQFTSIELLMGNNKLLCENCTDRRQRQMKRSDKKAEKVYTSARKQMLISALPPVVTLHLKRFHQAGMNLRKVNRHVDFPLLLDLAPFCSATCKNLGSGERVLYSLYGIVEHSGSMRGGHYAAYVKVRTPQRKPEQRRNQSGSREACSAPQGQWVYVSDTTVQTVPESRVLNSQAYLLFYEELL
What is the function of this protein?
Catalyzes the deubiquitination of SPDL1 (By similarity).  Plays a role in the repair of UV-induced DNA damage via deubiquitination of ERCC1, promoting its recruitment to DNA damage sites (By similarity).  May be involved in the maintenance of photoreceptor function (PubMed:30573563).  May play a role in normal retinal development (PubMed:27613029).
What are the official names of this protein?
Ubiquitin carboxyl-terminal hydrolase 45, Ubiquitin specific peptidase 45.
What is the protein family that this protein belongs to?
Belongs to the peptidase C19 family.
What are the subcellular locations of this protein?
Photoreceptor inner segment. Cytoplasm. Nucleus.
Protein: COAD_ENT38
Sequence: MSTKAIYPGTFDPITNGHIDIITRAASMFDRVILAIAASPSKKPMFDLEERVALATTALQHLPNVEVMGFSDLMANFARAQQANILIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHAGDVTHFLPANVHQALMEKLK
What is the function of this protein?
Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
What are the official names of this protein?
Phosphopantetheine adenylyltransferase, Dephospho-CoA pyrophosphorylase, Pantetheine-phosphate adenylyltransferase, PPAT.
What is the protein family that this protein belongs to?
Belongs to the bacterial CoaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GATA_DANRE
Sequence: MSASSAARRPVEAMLGLSIREVSQALRDGKVSATELCRKCINQIQRTRYLNAYITIAEETAMEQAERADKRLRTGKTLGPLDGIPFSVKDNFCTENIKTTCASNMLKGYVPPFSATVVQKLLDQGAVLVGKTNLDEFAMGAGSTDGAFGPVRNPWSYAAPYREQSAEDPDSDWTITGGSSGGSAAAVASLSSFLALGSDTGGSTRNPGSLCGVVALKPSYGLLSRHGLIPLVNSMDVPGIMTRSVHDAATVLRILQGRDERDSTTVQAPNTPPSLPEHFDMRKICVGIPKEYHAPGLSEDTLAQWSRVADIFENAGARVKEVSLPHTPYSIVCYHVLCCCEVASNMARFDGLEYGHRSAVDSSTDAMYATTRHEGFNNVVRRRILSGNYFLLKSNYERYFVKAQQMRRLIAEDFKKVFSSGIDVLLTPTTLSDAARYADFITEDNRTRSAQEDVFTQPVNMAGLPAVTVPTALSQRGLPIGLQLIGQTLQDWKLLTIAHWMEKQLHFPMIRFHRDLNENEREQNRSIRERTHTVGS
What is the function of this protein?
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria.  The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial, Glu-AdT subunit A, Glutaminyl-tRNA synthase-like protein 1.
What is the protein family that this protein belongs to?
Belongs to the amidase family. GatA subfamily.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: STHA_ECO5E
Sequence: MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF
What is the function of this protein?
Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation.
What are the official names of this protein?
Soluble pyridine nucleotide transhydrogenase, STH, NAD(P)(+) transhydrogenase [B-specific].
What is the protein family that this protein belongs to?
Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RNZ_PSEPW
Sequence: MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHQLLHTPLSVRDLRAIFITHVHGDHCFGLPGLLASAGMSGRTAPLDLVLPAALHDWVRLSLAASDSFLPFELRLLAVEQLGEWRSDTLAVSTVQLSHRVPSVAFVFTELNPEPRLDVQRLDAEGIPRGPLWGELAKGLTVEHAGRMLHGRDYLRASRPARRVIVCGDNDNPELLAEAAKDVDVLVHEATFTQPIIARTGVSFGHSSAAAVARFAETAGVRNLVLTHFSARYQPDPRRSPCIDEVREEAQVHYSGNLTLAQDLQRYHIGRDGCLGRVTGI
What is the function of this protein?
Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity.  Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.
What are the official names of this protein?
Ribonuclease Z, RNase Z, tRNA 3 endonuclease, tRNase Z.
What is the protein family that this protein belongs to?
Belongs to the RNase Z family.
Protein: ACBP_YEAST
Sequence: MVSQLFEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQLIAKYSS
What is the function of this protein?
Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters.
What are the official names of this protein?
Acyl-CoA-binding protein, ACBP.
What is the protein family that this protein belongs to?
Belongs to the ACBP family.
Protein: EIF3M_PONAB
Sequence: MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHIDLAQIIEACDVCLKEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSLSDT
What is the function of this protein?
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis.  The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC).  The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition.  The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation.  The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.
What are the official names of this protein?
Eukaryotic translation initiation factor 3 subunit M, eIF3m.
What is the protein family that this protein belongs to?
Belongs to the eIF-3 subunit M family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ZMIZ2_MOUSE
Sequence: MNPMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSPPGGSMMPGVAGGSSALTSPQCLGQQAFAEGGASKSYVQQGVYGRGSYPGGSSFTTGYAGGPAGLGLPTHAARPSTDFTQAAAAAAMAAAAATATATATATVAALQEKQSQELSQYGAMGTGQSFNSQFLQHGGPRGPSVPPGMNPSGMGGMMGPSGLSSMAMTPTRAAGMTPLYAGQRLPQHGYPGPPQGQPLPRQGIKRAYSEVYPGQQYLQGGQYAANTAQYAPGPGQPPGPASSYAGHRLPLQQGMAQSLSAPGPTGLHYKPTEQFNGQGASFNGGSISYSQPGLSGPSRSIPGYPSSPLPGNPTPPMTPSSNVPYMSPSQEVKSPFLPDLKPGLSSLHPSPSASVHCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLMLRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLSIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDLHIKEEPDGPVLKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSAPTPSDYPSQGSNFMGPGTFPESFPSATPTTPNLAEFTQGPPPISYQSDIPSSLLTPDKSTPCLPGQMAPAGHLDPAHNPGPPGLHTPNLGPTPGTQLHHPNPSPASRQPLGQPNTGPISELAFNPASGMMGPPSMTGAGEASEPALDLLPELTNPDELLSYLGPPDLPTNSSDDLLSLFENN
What is the function of this protein?
Increases ligand-dependent transcriptional activity of AR and other nuclear hormone receptors.
What are the official names of this protein?
Zinc finger MIZ domain-containing protein 2, PIAS-like protein Zimp7.
What are the subcellular locations of this protein?
Nucleus. Note=Detected at replication foci throughout S phase.
Protein: CLDN1_MOUSE
Sequence: MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYRSPIQENSSDSNKIAWEDFLGDEADEKTYNDVLFRYNGSLGLWRRCITIPKNTHWYAPPERTESFDVVTKCMSFTLNEQFMEKYVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACICRSLYPTLATGILHLLAGLCTLGSVSCYVAGIELLHQKVELPKDVSGEFGWSFCLACVSAPLQFMAAALFIWAAHTNRKEYTLMKAYRVA
What are the official names of this protein?
Claudin domain-containing protein 1, Claudin-25.
What is the protein family that this protein belongs to?
Belongs to the PMP-22/EMP/MP20 family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: TRHO_RICPR
Sequence: MNERITILSAYSFVNIIEPANLIPKLLLVGKKKYIRGTILLANEGFNSSFSGSYENVNIVLKQLIALTGSKDVNVKINYSPVHPFQKLKVRLKREIIAMNVKDLNVDVFKGHYIEPKDWDEFITKQNVILIDTRNEYEIDIGTFKSAINPRTETFKQFPAWVQQNHALLQGKKIAMFCTGGIRCEKSTSLLKSIGYNEVYHLKGGILQYLEDTHNKNNLWQGKCFVFDDRRAVADDLYPAEGYWLHR
What is the function of this protein?
Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.
What are the official names of this protein?
tRNA uridine(34) hydroxylase, tRNA hydroxylation protein O.
What is the protein family that this protein belongs to?
Belongs to the TrhO family.
Protein: RECB_BUCAP
Sequence: MVYSDTKTSKKIKKYKINIMKKKLNIFQIPLKGIHLIEASAGTGKTSTIAFLYLRLLLGLEKNKENIRKLSVKEILVVTFTNAAKEELYIRIKKSIKELHLSCIKKKSKDPIFQSFLTKIKNFDEAIHILEDAKININNAAIYTIHGFCQDVLENNTLISNREIIENESFLYLQATQDFWRYFFYNLPKKIIKIIYEEYRSPEDLLREIKPILKVNSSINFKKKFDKKETLITFHEKIINKINIFKQKWLNYNLIILKIINQLKVNKKIYSNFNILKWKKKITEWAESETKNYKMPICLKYFSETSIEKNIKNYNFKKHIFFEEIDKILKKNFSLKNIILFYAIKNIPKFVKREKEKKLLLGFNDLLKILLKNIKKEESLREIIIKQYPVALIDEFQDTNIQQYQIFNTLYKNKKTALFLVGDPKQSIYSFRGADIFSYLHAKFKIKNYYYLDTNWRSSKNICKAINYLFSKNKNPFYFKNIPFEPILSSSKNLNMKFKIKEKNQTAISFFFQKKEEVNIEEYRDWIAKQCANEISYWLTCSKKGEAIISDGSQERILTEKDIVILVRNRTEAQIIKESLKKVNILSKYSSPYESVFKTFDALELLSILKSILDPTDINLLKKSILTHILNKIAFQKIKENSKTKISHFLIQKLYEYNDKWKTIGIFYTIKTMILEYQKYANNFEMYKNQQRNINFLHIAELLQEKSQNCYKENSLMRWFEKKILEKNNISENEYIKNFAESKIIRIITIHKSKGLEYPIVWIPFIVDFNVSKSYFYHEKKTLKIFFDNNKSSETLKKSDEERLAEDLRFLYVALTRSIYHCSIGISYLVKKRKKNKKSSDIHKSSLGYIIQNGKCMNYKELLYELKILNKKLYIEVKYQAMNCKSLTIKKDDLYILSQPQFLLKEIKLYSQITSFTKIKQENKHFNNIQYNNIESYFFKEKDKKKTIHNFPHGNKAGIFIHYILKTIKFNNTFNIDWFYTILKKYEFSEKWAKTLMFWINNILNFKINNLNITLSSLKKTQYIKELEFFLPIKNTLYCEDLNQIIQSIDLISSISQKIFFNPVIGILKGFIDLVFIFNKKYYILDYKCNYLGNNDNCYSSKNIKKEIIKNRYDIQYQLYTLALHQYLKKKVKQYHYKTHFGGVFYLFLRGINVKDSIFYILPDYLLIKKLTKLILQKK
What is the function of this protein?
A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair.  Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity.  Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction.  Cuts ssDNA a few nucleotides 3' to the Chi site.  The properties and activities of the enzyme are changed at Chi.  The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair.  Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination.  In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA.
What are the official names of this protein?
RecBCD enzyme subunit RecB, Exonuclease V subunit RecB, ExoV subunit RecB, Helicase/nuclease RecBCD subunit RecB.
What is the protein family that this protein belongs to?
Belongs to the helicase family. UvrD subfamily.
Protein: PCKA_ACTPJ
Sequence: MLSRIEQELAQLGITNVKEIVRNPSYEQLFEEEMKPELEGFEKGRLTTSGAVAVDTGIFTGRSPKDKYIVYDETSKDNVWWTSDAVKNDNKPMNQATWQSLKELVTHQLSNKRLFVVDAFCGANKDSRVAVRIVTEVAWQAHFVKNMFVRPSEEELLNFVPDFVVMNGSKVTNPNWKEQGLNSENFVAFNLTEKIQLIGGTWYGGEMKKGLFSLMNYWLPLKGIASMHCSANVGAEGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNYEGGCYAKTINLSEENEPDIYRAIRRDALLENVVVREDGSVDFADGSKTENTRVSYPIHHIDNIVEPVSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEVLVKRMEEAGSQAYLVNTGWNGSGKRISIKDTRGIIDAILDGSIEKAETKELPIFNLAIPTALPNVDPAILDPRDTYADKAQWQTKAEDLAGRFVKNFEKYTTNDEGKALVAAGPKL
What is the function of this protein?
Involved in the gluconeogenesis.  Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
What are the official names of this protein?
Phosphoenolpyruvate carboxykinase (ATP), PCK, PEP carboxykinase, PEPCK.
What is the protein family that this protein belongs to?
Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PER2_DAUCA
Sequence: SPPFTSDQDLYTDSR
What is the function of this protein?
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.  These functions might be dependent on each isozyme/isoform in each plant tissue.
What are the official names of this protein?
Peroxidase 2.
What is the protein family that this protein belongs to?
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
Protein: PA2A1_BUNFL
Sequence: MNPAHLLVLAAVCVSLLGAAIVPPQPLNLYQFNNMIQCANHGNRPTWHYAHYGCYCGKGGGGTAVDELDRCCQTHDNCYGEAEKLPKCSPYYKTYKYDCSEGKLTCKDAPGSCERSVCDCDRVAANCFAGAPYNNDNFFISFKENCQ
What is the function of this protein?
PLA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
What are the official names of this protein?
Acidic phospholipase A2 1, svPLA2, PA2-I, Phosphatidylcholine 2-acylhydrolase.
What is the protein family that this protein belongs to?
Belongs to the phospholipase A2 family. Group I subfamily. D49 sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: PARP_ECOLX
Sequence: MLLNKDRFGKLTSKSLDSIAALGLREANAELPCLFRNNSIESSSKTPPEPLSPLAFELSTNLKKSASALAWNVQYFVDTYGLSNVGFLTLTFRDHVTDPKEAQRRFNSLKTNILAKRYRAYIRVMEPMKSGRIHYHLLVALHSDIRTGFDFPAVYRQDYSSANKAIRSEWSFWRKTAPKYGFGRTELMPVRSNSEGIGRYVGKYISKGIESRTEQFKGVRLVEYSRKAKSLLRASSSFLTGLMSGVANFRYSFITSRTIWAVNQLLTAYAVFSALVGRITGVILL
What is the function of this protein?
Essential for autonomous replication of the phasyl DNA replicon.
What are the official names of this protein?
Phasyl DNA replicon protein arp.
Protein: Y379_PETMO
Sequence: MKSIYKYTFMLFVFLFGTLMMAEDITGEIVVFHAGSLSVPFAQIEKAFESQYPGTDVIREAAGSREAVRKVTDLGREADVIGSADYTVIENLMIPEYTEWYINFANNEMVIMYTEDSRYKDEINSDNWYEILLRPDVEYGHSDPNADPCGYRSQIVWKLAEKYYKVDSLYKKLADNCPPKNVRPKETDLIALLEAGELDYIFIYKSVALQHRMPYVELPEQINLKSTKYADFYATASFDVTGKEPGEMITQIGQPMVYALTIPNNAPNLQGAIAFIKFVIGPQGRAIMEENGQPSINPPEGVNIEKAPQELQDFLKGGAND
What are the official names of this protein?
Uncharacterized solute-binding protein Pmob_0379.
What is the protein family that this protein belongs to?
Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily.
Protein: RBFA_GEOSW
Sequence: MNLRATRVGEQMKKELSDIIGRKLKDPRIGFVTVTDVRVTGDLQQAKVYISVLGDEEQRQNTLKGLEKAKGFIRSEIGQRIRLRKTPEIFFEIDESIEYGNRIEQLIRQISTEHEGGKKEEENKEE
What is the function of this protein?
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit.  Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes).  Required for efficient processing of 16S rRNA.  May interact with the 5'-terminal helix region of 16S rRNA.
What are the official names of this protein?
Ribosome-binding factor A.
What is the protein family that this protein belongs to?
Belongs to the RbfA family.
What are the subcellular locations of this protein?
Cytoplasm.