PharMolix/UniProtQA huggingface dataset:
Protein: Y2172_ARCFU
Sequence: MSSEAGNPHPGFKMEYLSGSIAPDAGYTISVDWGKKFHGEDVNKAIKIANTMLSLAKGTDEKAFAKGWLAHLMQDRVAHGNGQGLPNDRTYGVGYSNYAAQKYGIDHITAEFYVNGRVIHEKGWNWDFVRIAIPTKLIAKAMKSLYGSSPSESDLSNAYNKFAAEYYAELTFWNSPAGNTLYLSLYLTGVVADYDDYVQEVNCNPYEKSIELTRSPNAMSATFSPLVAKDAKGTNVQIKKWVKEYATMLEKSGAIKVSRKFENGWLVIEFKMTDKAKADKIAEQVLRNMVKSGELPENTAKILSRMF
What are the official names of this protein?
Uncharacterized protein AF_2172.
Protein: Y3165_AZOSB
Sequence: MHLHPTRDFLRLLGERFSATRCPQVAGSLAFTTLLALVPLLTVAIGVFGNLPGMDKLGASLKDFLLENLLPDRAGRIITTYALQFSQKAARLTLIGTAMLAVTALMLLATIERVFNQIWGVRHRRPLLMRITVSWFMLTLGPVILGGSVVATGYLVSTSAEWSDRLPWIGEIAAATLPPLLLGALFSFLYYAVPNHPVRLLHALAGGLCAALVFLLMQRGLGLFIAGFPTYTLIYGTFAALPIFLLWLYLSWTVILLGALITATLPAFLERQRMLPAFPGDRAWAAVEMLAALAEAQYDGRPVGFAALRRRTNLAEHAAEALLESLRECGIASRTEGGDWVLTRAASDIRLSAVLQRFALDLTAWSALSPGRGGRIVAERLREGLQAADLSLAELAAANTSAGAVQVG
What are the official names of this protein?
UPF0761 membrane protein azo3165.
What is the protein family that this protein belongs to?
Belongs to the UPF0761 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: FIBER_BPT7
Sequence: MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTTDTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWQARNEALQFRNEAETFRNQAEGFKNESSTNATNTKQWRDETKGFRDEAKRFKNTAGQYATSAGNSASAAHQSEVNAENSATASANSAHLAEQQADRAEREADKLENYNGLAGAIDKVDGTNVYWKGNIHANGRLYMTTNGFDCGQYQQFFGGVTNRYSVMEWGDENGWLMYVQRREWTTAIGGNIQLVVNGQIITQGGAMTGQLKLQNGHVLQLESASDKAHYILSKDGNRNNWYIGRGSDNNNDCTFHSYVHGTTLTLKQDYAVVNKHFHVGQAVVATDGNIQGTKWGGKWLDAYLRDSFVAKSKAWTQVWSGSAGGGVSVTVSQDLRFRNIWIKCANNSWNFFRTGPDGIYFIASDGGWLRFQIHSNGLGFKNIADSRSVPNAIMVENE
What is the function of this protein?
Structural component of the short non-contractile tail.  The tail comprises six fibers made of gp17 trimers, 2 nm in diameter and 32 nm in length.  May attach to host lipopolysaccharides (LPS) to mediate primary attachment to the host cell.
What are the official names of this protein?
Tail fiber protein, Gene product 17, Gp17, Tail fiber protein gp17.
What are the subcellular locations of this protein?
Virion.
Protein: SYQ_SALPA
Sequence: MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIREYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAAEDFLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRTVGLRDTWAKAGE
What are the official names of this protein?
Glutamine--tRNA ligase, Glutaminyl-tRNA synthetase, GlnRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NS1_I79A1
Sequence: MDSNTVSSFQADCFLWHVRKRFADQELGDAPFLDRPRAHQKSLRGRGSTLGLDIETATRAGKQIVERILEEESDEALKMTIASVPASRYLTDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGLEWNDNTVRVSETLQRFAWRSCNEDWRPPLPPKQKRKMARTIESEV
What is the function of this protein?
Inhibits post-transcriptional processing of cellular pre-mRNA, by binding and inhibiting two cellular proteins that are required for the 3'-end processing of cellular pre-mRNAs: the 30 kDa cleavage and polyadenylation specificity factor/CPSF4 and the poly(A)-binding protein 2/PABPN1.  In turn, unprocessed 3' end pre-mRNAs accumulate in the host nucleus and are no longer exported to the cytoplasm.  Cellular protein synthesis is thereby shut off very early after virus infection.  Viral protein synthesis is not affected by the inhibition of the cellular 3' end processing machinery because the poly(A) tails of viral mRNAs are produced by the viral polymerase through a stuttering mechanism.
What are the official names of this protein?
Non-structural protein 1, NS1, NS1A.
What is the protein family that this protein belongs to?
Belongs to the influenza A viruses NS1 family.
What are the subcellular locations of this protein?
Host nucleus. Host cytoplasm. Note=In uninfected, transfected cells, NS1 is localized in the nucleus. Only in virus infected cells, the nuclear export signal is unveiled, presumably by a viral protein, and a fraction of NS1 is exported in the cytoplasm.
Protein: SYC_CHLFF
Sequence: MRQSSENSQNLYLYNTATRTKELFSASNAPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTLLFFGYSVKHIMNITDVDDKTLAGACRKNISLEEYTAPFIQAFFEDIAELNILPADVYPHATHYIPQMIKAIQKLLDENIAYIGQDSSVYFSIKKFPTYGKLSQLKLQDLQCCSRVTSDEYDKENLSDFVLWKAYDEQRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIHAGGVDNIFPHHENEIAQSESLSHKPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLDRGFSGEEIRYLLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRLENPYPESTTISDEIDQQGKTFLKAFSDSIANDLNIAAALAALFDFIHQTNSFIDKSKFTQADANYILDLLKKINTVLGILQFSATQEIPDEVMQLVEKREVARREKNWAQADAFRDQVASLGYLIEDSKSGPKVKKL
What are the official names of this protein?
Cysteine--tRNA ligase, Cysteinyl-tRNA synthetase, CysRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TIG_CLAM3
Sequence: MKTTVEKLSPTRVKLAISATPEDLKPHIDHAYGHIAEQVAIPGFRKGKVPPPIIDQRVGREAVLEHAVNDGMDGFYQAAVKETDIRPLGRPEADVKEWPGKDLTGDLLLEIEVDVRPEFDLPAYEGLELTVDSVEVTDDEVATELDSLRSRFGTLITVDRPAKTGDFVQIDLTATIGGNAVDTASGISYELGSGDLIDGIDEALESLTAGESTTFESKLLGGDNEGETAEIAVTVQSVKERELPEADDDFAQIASEFDTIDELRADLKVQVGKSKVFGQVTQARDQIVDKLLEGVEIPVPEKLVEDEVQRHLENENRLEDDVHRAEVKESSEKAFRQQLLLDVIAEKEELKVSQDELTQYLIQGAQQYNMEPNEFVQVLQQNNQIPAMVGEVARNKALAVVLDKAKVVDADGKVVDVTEFTKPVVRDADAVSEEPADADAEAVVADAPAEEAAEAPAAEEAPAEKPKKKAPAKKKASEKAADSE
What is the function of this protein?
Involved in protein export.  Acts as a chaperone by maintaining the newly synthesized protein in an open conformation.  Functions as a peptidyl-prolyl cis-trans isomerase.
What are the official names of this protein?
Trigger factor, TF, PPIase.
What is the protein family that this protein belongs to?
Belongs to the FKBP-type PPIase family. Tig subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm.
Protein: XYLG_BURO1
Sequence: MTEPLLTMRGIVKAFDGVKALDGIDLTVRPGECVGLCGENGAGKSTLMKVLSGVYPHGTWDGEIRWEGAPLAASGVRDTERAGIVIIHQELMLVPELSVAENIFLGNEITLPGGRMNFAAMVQRAEELLRELRIDTINVAQPVMNYGGGHQQLIEIAKALNKHAKLLILDEPSSSLSASETRILLDIVRDLKRRGVACVYISHKLDEVAAVCDTVTVIRDGRHVATEPMATLTTDRIIAMMVGREIRDLYPREPHEIGDVVLDVRHVTCRDVTNARRKRVDDVSFSVRRGEIVGVAGLVGAGRTELMQAIFGAYPGACTASVTMNGKPLSIRSPADAIRAGIAMVPEDRKRHGIVPQLGVGHNITLAVLRRFAARGRIDAAAELDTIRTEMQRLSVRAAHPFLSIASLSGGNQQKAVLAKMLLTEPQVLILDEPTRGVDVGAKAEIYRLIFALAQRGVALIVVSSELPEVLGLADRVLVIGEGELRGDFVNQGLTQEQILGAALKPARLAAEPTAASAT
What is the function of this protein?
Part of the ABC transporter complex XylFGH involved in xylose import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Xylose import ATP-binding protein XylG.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
Protein: IOLA1_BACCZ
Sequence: MITTEIKRVKNHINGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPNIASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTSERTPLLAERLVELFYEAGFPKGVLNLVQGGKDVVNSILENKDIQAVSFVGSEPVARYVYETGTKHGKRVQALAGAKNHAIVMPDCNLEKTVQGVIGSAFASSGERCMACSVVAVVDEIADEFIDVLVAETKKLKVGDGFHEDNYVGPLIRESHKERVLGYINSGVADGATLLVDGRKIKEEVGEGYFVGATIFDGVNQEMKIWQDEIFAPVLSIVRVKDLEEGIKLTNQSKFANGAVIYTSNGKHAQTFRDNIDAGMIGVNVNVPAPMAFFAFAGNKASFFGDLGTNGTDGVQFYTRKKVVTERWF
What is the function of this protein?
Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.
What are the official names of this protein?
Malonate-semialdehyde dehydrogenase 1, MSA dehydrogenase 1, Methylmalonate-semialdehyde dehydrogenase 1, MMSA dehydrogenase 1, MSDH 1.
What is the protein family that this protein belongs to?
Belongs to the aldehyde dehydrogenase family. IolA subfamily.
Protein: BALAT_DROME
Sequence: MDFDEVLREVGSFGLYQKVIICSVLLPAALPCAFHAYSQLFIAATPQHFCRVPELEPWTQDYVQLVKNLSIPRNRNGAYAECSMYSRNYTDIVRYLEYRPPPDLLRQQAEDLLKLQPDTTQVVPCQHGWHYDKSIYSSTVVQEWNLVCDRSFLVTLALVVFGVGGLLGNYVFGYLVDLWGRRPSFYAYLLLEIIACAASAFAWNYYTWLGLRFVVGLTVPAILASPYVLAIELVGPERRVFCTIVSNIAYSLGLVVLAGVIYIVRDWRELSLAVSMPLLMLFSCFFVLPESPRWLMAVGKTRRAIKILKVMARVNGVRVNRDFVERLQRKLVITRAAETKSSMTTHYGILDLFRGPNMRRKTLIITLIWFANTSVYVGLSYYAPALGGDEIWNFFLAGAVELPTYLLLWPGLSYFGRRWILFISMLVGGVACVATFLYPDITLLLYCVGKMGISSSFVVLPLMASELYPTVVRGLGMSFSSVISMVGPIVIPMINHMGQQMLVLPLIVMGALLILGGFASLLLPETRNRNLPQTLEEGEAVPLSFLLCCCVESERKPNNIRASPKKRILPEAGTPVFHRVDTPVSDRVPCKIVCSICKNEMRTL
What is the function of this protein?
Beta-alanine transporter required for the uptake of beta-alanine by the glia (PubMed:28806173).  Required for the recycling process of the neurotransmitter histamine in photoreceptor neurons of the compound eye and therefore for photoreceptor synaptic transmission (PubMed:28806173).  Following histamine release from photoreceptors and its uptake by glia, histamine is conjugated to beta-alanine by e/Ebony to form the inactive metabolite, carcinine (PubMed:28806173).
What are the official names of this protein?
Beta-alanine transporter, BalaT.
What is the protein family that this protein belongs to?
Belongs to the major facilitator (TC 2.A.1) superfamily. Organic cation transporter (TC 2.A.1.19) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: ILVD_STRT1
Sequence: MEENIVSENNMKHRSSVYDSMVKSPNRAMLRATGMTDDSFEKPIVGVISTWAENTPCNIHLHGFGQIAKEGVKDAGAWPVQFGTITVADGIAMGTPGMRFSLTSRDIIADSIEAAMGGHNVDAFVAIGGCDKNMPGSMIAIANMDIPAIFAYGGTIAPGNLNGKDIDLVSVFEGIGKWNHGDMTAEEVKNLECNACPGPGGCGGMYTANTMATAIEVMGMSLPGSSSHPAESAEKKADIEEAGRAVVKMLEMGLKPSDILTREAFEDAITVTMALGGSTNATLHLLAIAHAANVDLTLEDFNDFQERVPHLADLKPSGQYVFQDLYNVGGVPAVMKYLLKNGFLHGDRITCTGKTVAENLEAFDDLTPGQKVIMPLENPKRADGPLIILKGNLAPEGAVAKVSGVKVRNITGPAKVFDSEEDAIEAVLSDEIVDGDVVVVRFVGPKGGPGMPEMLSLSSMIVGKGQGDKVALLTDGRFSGGTYGLVVGHIAPEAQVGGPIAYLRTGDMVTVDQDTKEITMHVPDEELAKRKAETELPPLYSRGVLGKYAHIVSSASRGAVTDFWNMDKSGKA
What is the function of this protein?
Functions in the biosynthesis of branched-chain amino acids.  Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
What are the official names of this protein?
Dihydroxy-acid dehydratase, DAD.
What is the protein family that this protein belongs to?
Belongs to the IlvD/Edd family.
Protein: FIT3_YEAST
Sequence: MKFSSALVLSAVAATALAESITTTITATKNGHVYTKTVTQDATFVWGGEDSYASSTSAAESSAAETSAAETSAAATTSAAATTSAAETSSAAETSSADEGSGSSITTTITATKNGHVYTKTVTQDATFVWTGEGSSNTWSPSSTSTSSEAATSSASTTATTTAETSSSATSSSTAELSSYTGAADAITAGTGLMGAALAAVMLL
What is the function of this protein?
Involved in the uptake of non-siderophore and siderophore sources of iron.  Has a role in the retention of iron in the cell wall and periplasmic space.
What are the official names of this protein?
Facilitator of iron transport 3.
What are the subcellular locations of this protein?
Secreted, cell wall. Membrane; Lipid-anchor, GPI-anchor.
Protein: SYR_SALSV
Sequence: MNIQALLSEKVSQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQVQQALASERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGMLIAWLEKQQQENAGDMALADLEGFYRDAKKHYDEDEAFAERARNYVVKLQSGDTYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKADIDEQALASAPVIISEDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ADA21_MOUSE
Sequence: MECFIMLGADARTLMRVTLLLLWLKALPSLIDLSQTGSTQYLSSPEVVIPLKVTSRARGAKNSEWLSYSLVFGGRRHVVHMRVKKLLVSTHIPVLTYTEEHTPLSDYPFVPSDCYYHGYVEGALESLVAFSACNGGLQGVLQMNGFSYEIEPIKHSSTFEHLVYTLNNNKTQFPPMLCSLTEKRLLYQPFGVEEAKKSAMKQNYGKLWPHMWFLELAVVVDYGFFTNAQQNLSKVRGDVVLVVNMVDSMYKPLDTYVTLVGIEIWNRGNVLPMENIHQVLEDFSHWKQISLSQVHHDAAHIFIRSSLISVLGIAYIAGICRPPLDCGVENFQGDAWSLFANTVAHELGHTFGMKHDEESCSCGKSGCVMSTFRVPAERFTNCSYSDFMKTTLNQGTCLYNHPRPGAGFLVKRCGNGMVESEEECDCGSVQECEQDPCCFLNCTLRPAAACSFGLCCKDCKFMLLGELCRPKINECDLPEWCNGTSHQCPEDGYVQDGVPCGAGAYCYQKQCNNHDQQCREIFGKGARSASHNCYKEINLQGNRFGHCGTDGTVFLKCRMSDVFCGKVHCENVEDIHHPQAPYVLQNIYANGITCWSTGHCLGMGVPDVGEVKDGTTCGVGKICLHKKCVSLSVLSNACLPETCNRKGVCNNKHHCHCDYGWSPPFCLHRGYGGSIDSGPTSQKRRVIITVLSITVPVLSILICLLIAGLYRIYCKIPSGPKETKASSPG
What is the function of this protein?
May be involved in sperm maturation and/or fertilization.  May also be involved in epithelia functions associated with establishing and maintaining gradients of ions or nutrients.
What are the official names of this protein?
Disintegrin and metalloproteinase domain-containing protein 21, ADAM 21, Disintegrin and metalloproteinase domain-containing protein 31, ADAM 31.
What are the subcellular locations of this protein?
Membrane; Single-pass type I membrane protein.
Protein: CH60_BORBU
Sequence: MAKDIYFNEDARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVNLAAEKIRQSAKKITTKEEIAQVASISANNDSYIGEKIAEAMDKVGKDGVITVEESKTFDTTISYVEGMQFDRGYLSPYFSTNKENMSVNFDDAFILIYEKKISSIKELLPVLEKVLGTNKPLLIIAEDIEGDALAALVLNSVRGALKVCAIKSPGFGDRRKAMLEDIAVLTGGVLISEELGLTLETVEIEQLGQAKTIKVDKDNTTIINTGNKEQIKERSELIKKQIEDSTSEYDKEKLQERLAKLVGGVAVINVGAVTEVELKEKKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTIDTSKLSYEEKQGFEIVKRSLEEPMRQIISNAGFEGSIYIHQIKTEKKGLGFDASSFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTECAITDIKEEKNTSGGGGYPMDPGMGMM
What is the function of this protein?
Together with its co-chaperonin GroES, plays an essential role in assisting protein folding.  The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.
What are the official names of this protein?
Chaperonin GroEL, 60 kDa chaperonin, Chaperonin-60, Cpn60.
What is the protein family that this protein belongs to?
Belongs to the chaperonin (HSP60) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NCAP_SVCV
Sequence: MSVIRIKTNATVVAVLPASEDQADYPSTFFEGGNEIRLYVNKEEKLDVLRQYVYMGLVEKNCKIQHVNAYLYAVLKGERELLEADWDSFGHKIGIRGEKIGPFNLVRVEDIPDGLPDGKLNAEVSAEDDAWLPLFLLGLYRVGRASETAYRTLLMESLIKQCKAIKSDWVSPVTATHKYFDVWGNDGNYLKIVACVDMFYNHFKKSIKATFRWGTIVSRFKDCAALATLGHVVKITGLTIEEVFTWVLQTEVAEELVKMMKPGQEIDNSSSYMPYLIDMGISAKSPYSTIKNPSFHFWGQLVAALCRSKRALNARQPDEIDSMSISNASLLMAYALGSSPDIEQQFSTGDTYRKPPKEASYLVSEEPKSRSVVEWIAWYSDVDNKPTDDMLMMAKRVAGTISGPRDNSVGKWIKQTYG
What is the function of this protein?
Encapsidates the genome, protecting it from nucleases.  The encapsidated genomic RNA is termed the NC and serves as template for transcription and replication.  Nucleocapsid assembly is concommitant with replication, therefore viral replication depends on the intracellular concentration of free N, termed N(0).  All replicative products are resistant to nucleases.
What are the official names of this protein?
Nucleoprotein, NP, Nucleocapsid protein, Protein N.
What are the subcellular locations of this protein?
Virion. Host cytoplasm. Note=The nucleocapsid is synthesized in the cytoplasm, and is subsequently transported via microtubules to the cell periphery.
Protein: ATPB_BACMK
Sequence: MNKGRVTQIMGPVVDVKFDGGKLPEIYNALTVKQSNENGASINLTFEVALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGDVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEEDKLVVHRARRIQFFLSQNFHVAEQFTGQKGSYVPVKNTVSGFKEILEGKYDDLPEDAFRLVGSIEEVIENAKKMMA
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: VM3BA_BOTAS
Sequence: SHDNAQLLTAIKAYIATMCDPKMAVIMAHEIGHGGYYGYCRKIPCAPEDVKDDDIGMVLPGTK
What is the function of this protein?
Snake venom zinc metalloproteinase that catalyzes the conversion of prothrombin (F2) to alpha-thrombin through formation of a thrombin intermediate, without requiring additional cofactors.  Also inhibits collagen-dependent platelet aggregation in vitro, an effect that does not depend on proteolytic activity.  In vivo, at low doses, induces defibrin(ogen)ation when injected intravenously or intramuscularly into mice.  At higher doses, causes sudden death by intravenous administration due to numerous occluding thrombi in pulmonary vessels.
What are the official names of this protein?
Snake venom metalloproteinase basparin-A, SVMP.
What is the protein family that this protein belongs to?
Belongs to the venom metalloproteinase (M12B) family. P-III subfamily. P-IIIa sub-subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: LOLD_BORBR
Sequence: MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
What is the function of this protein?
Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA.  Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
What are the official names of this protein?
Lipoprotein-releasing system ATP-binding protein LolD.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: ACL7A_HUMAN
Sequence: MWAPPAAIMGDGPTKKVGNQAPLQTQALQTASLRDGPAKRAVWVRHTSSEPQEPTESKAAKERPKQEVTKAVVVDLGTGYCKCGFAGLPRPTHKISTTVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQDQMGIVEDIKKKCCFVALDPIEEKKVPLSEHTIRYVLPDGKEIQLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTPQVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF
What is the function of this protein?
May play an important role in formation and fusion of Golgi-derived vesicles during acrosome biogenesis.
What are the official names of this protein?
Actin-like protein 7A, Actin-like-7-alpha.
What is the protein family that this protein belongs to?
Belongs to the actin family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton. Golgi apparatus. Cytoplasm. Nucleus. Cytoplasmic vesicle, secretory vesicle, acrosome. Note=Detected at the Golgi apparatus during acrosome biogenesis. Detected at the subacrosomal layer in round spermatids. Detected in sperm head and tail.
Protein: YRA2_YEAS6
Sequence: MDKAFDEIIGNSHTDSSSNHKVTRYRRRDLRNELGPRLGFAPSDAASRSKDRLYREREEPPLPKRIRISKIPLDVSDYTLDDMIKEFGSPIFSKIFDNKEDRTCIYEFEDPEVLEKIVERYNGHELHNAKIEVEIYQPQRKHSRMNAHNRRKQTAQEQGRGRPGSHYRQRPNRVSKKNKGREKNNTPTSVEALDAELDAYMKG
What is the function of this protein?
Involved in export of poly(A) mRNAs from the nucleus.  Recruited to the coding sequences as well as poly-A sites of active genes (By similarity).
What are the official names of this protein?
RNA annealing protein YRA2.
What is the protein family that this protein belongs to?
Belongs to the YRA1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: Y701_ALISL
Sequence: MQIWVDADACPKVVKEVLCRAATRTGLQITFVANHYVPVPTAPNIKSIQVESGFDVADDEIVRRSEAGDLVISGDIPLAAELIEKKVQVLNPRGELYTEATIKARLNIRDFMDTMRASGIQTGGPAALSQTDRREFANQLDRILAKVKKTI
What are the official names of this protein?
UPF0178 protein VSAL_I0701.
What is the protein family that this protein belongs to?
Belongs to the UPF0178 family.
Protein: CD52_HUMAN
Sequence: MKRFLFLLLTISLLVMVQIQTGLSGQNDTSQTSSPSASSNISGGIFLFFVANAIIHLFCFS
What is the function of this protein?
May play a role in carrying and orienting carbohydrate, as well as having a more specific role.
What are the official names of this protein?
CAMPATH-1 antigen, CDw52, Cambridge pathology 1 antigen, Epididymal secretory protein E5, Human epididymis-specific protein 5, He5.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor, GPI-anchor.
Protein: RNC_BORPD
Sequence: MSLATLETRLDHRFGNAALLEQALTHRSHSARHNERLEFLGDSVLNFVVAAMLFERFPKLDEGDLSRLRANLVKQASLADIGQRLELSQYLRLGEGELKSGGFRRPSILADAVEAIFGAAFLDGGFDTARKVIVRQYQPVLASVDPKTLGKDAKTLLQEFLQGRKLALPLYTVVATHGAAHSQQFEVECAIPALEIKVVAPGASRRAAEQSAAKLALEAAQAASPARAVRKQGKARKAAQLSLPVAVAQEVK
What is the function of this protein?
Digests double-stranded RNA.  Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S).  Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon.  Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
What are the official names of this protein?
Ribonuclease 3, Ribonuclease III, RNase III.
What is the protein family that this protein belongs to?
Belongs to the ribonuclease III family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: IF2C_EUGGR
Sequence: FQSSGSPIKPRINLDRPSTSTPTPPEAPTSPSARQPVTQVPQANSVPAGAVASQAEVKKPADPQPPATPSAPVLRRPVRTAMPASPPRMVINLDDIPDRSKPVWPAPPPRAKGQGGGKGGKGGKGGKGGKGGKGDREQPAVVRRAKPRRTASTAEGPAAESKESGGREAQIWVTPKGGKGRDKWKKGKEEVDKSEALLLKARKKTRLERKERREEVREANAAKKEEIIEVGPQGMTVSEIAGKLAITPANVVTVLFKKGIMSAPSQTIAYDLVKIVCDEYKVEVLEVEEEDGIASMEDRFVLDEEAEALVSRPPVVTIMGHVDHGKTSLLDYIRKSNVVAGEASGITQAIGAYHVEFASPTDGTPTFISFIDTPGHEAFTAMRARGATVTDITIIVVAADDGVRPQTKEAIAHCKAAGVPMVVAINKIDKDGADPERVMNELAQAGLVPEEWGGEVPTVKISAKKGLGIKELLEMILLTAEVADLKANPAAPAEGTVIEAYLDRTRGPVATVLVQNGTLRAGDVVVTNATWGRVRAIMDEKGAMLEAAPPSLPVQVLGLDDVPAAGDKFEVYASEKEARDKVDEFERTKKEKNWASLASRDLVRLDNNADGKGLEVMNVILKTDVSGSCEAIRAALDTLPQTKIELRLILASPGDITVSDVNLAASTGSIILGFNVDTFSAAEALIKNLGIKCMTFDVIYDLVDQMKAVMEGKLGDEQIPEKAGEAEVKAVFAARNGKKAAGCLVVAGRLVAPAFIEVLRKKKILFSGQLFQLRRMKDNVSEVGTDTECGVTLDDFDDWQEGDRIVCYSTVTRQRALEATPA
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity).
What are the official names of this protein?
Translation initiation factor IF-2, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.