PharMolix/UniProtQA huggingface dataset:
Protein: RL2_SYNJB
Sequence: MGIRTLRPYTPSTRHMTVSDFEELSRDENGKRPRPEKSLLQFIHRKKGRNNRGVITCRHRGGGHKRLYRIIDFRRDKRGIPGTVKTVEYDPNRSAHICLVEYEDGEKRYILAPRNLQVGSTIMAGPEAPFEIGNAMPLERIPLGTVVHNVELYPGRGGQMVRAAGAGAQVVAREGKYVSLKLPSGEVRMIRGECYATIGQLGNVDHNNISLGKAGRSRWLGRRPKVRGSVMNPVDHPHGGGEGRAPIGRSTPVTPWGKPTLGYKTRKRNKPSNKFIVRGRRRGGRRDKGGRAAQ
What is the function of this protein?
One of the primary rRNA binding proteins.  Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation.  It has been suggested to have peptidyltransferase activity; this is somewhat controversial.  Makes several contacts with the 16S rRNA in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L2.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL2 family.
Protein: TFB4_CANGA
Sequence: MDAIADPNFQQTKLRSTATEDIPSLLTVVLDISPRLWAEFDHRSGEKQSVTTVLKSLIVFLNSHLAFNSANQVAVIAAFSQGIQYLYPRSSDTSEQNAGNSKDLSIISSHMYRRFRNVDETLIEEFYKLYQREESLIDKPVQKSTLSGAMAAALTYTNRLTKEFESISLRSRLLVITCGSSREKDEIFQYIPIMNCIFSATKLKCPIDVIKIGGNKQSTFLQQTTDATNGVYIHLESTNGIIQYLSTAMSIDPSLRQIIVRPTQGSVDFRTSCYLTGKVVAIGYICSVCLCVLSIIPPGNKCPACDSQFDERVIAKLKKKPVVPKSTLKKVKKKV
What is the function of this protein?
Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II.  In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment.  In transcription, TFIIH has an essential role in transcription initiation.  When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape.  Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module TFIIK controls the initiation of transcription.
What are the official names of this protein?
General transcription and DNA repair factor IIH subunit TFB4, TFIIH subunit TFB4, RNA polymerase II transcription factor B subunit 4.
What is the protein family that this protein belongs to?
Belongs to the TFB4 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: MET5_YEAST
Sequence: MTASDLLTLPQLLAQYSSSAPQNKVFYTTSTKNSHSSFKGLESVATDATHLLNNQDPLNTIKDQLSKDILTTVFTDETTLVKSIHHLYSLPNKLPLVITVDLNLQDYSAIPALKDLSFPILISSDLQTAISNADSSYKIATSSLTPVFHFLNLEKIGTSTAIEQDIDFPTLEIANEETKVALSEATDSLTNFELVKGKESITTVIVNLSPYDAEFSSVLPSNVGLIKIRVYRPWNFSKFLEILPSSVTKIAVLQGVSKKSQSNEFQPFLLDFFGNFNELVSRNIEQVVLTNIGNVNDYGNVINTVISNINKKEPDNNLFLGESNEKAEEQAEVTQLISSVKKVVNLEDAYIKVLKQLFSSNLQILNQFSSETIEPSNPEFGFGRFLKQEAQREELISLAKTSLDPSLYLSEDANKIVQLLSKWLSFNGRDLDEAQLQEANATGLEIFQLLQSNQDSSTVLKFLKIAPTSDSFIFKSSWLIGSDAWSYDLGHSGIQQVLSSRKNINVLLIDSEPYDHRKQNQDRKKDVGLYAMNYYSAYVASVAVYASYTQLLTAIIEASKYNGPSIVLAYLPYNSENDTPLEVLKETKNAVESGYWPLYRFNPVYDDPSTDKEAFSLDSSVIRKQLQDFLDRENKLTLLTRKDPSLSRNLKQSAGDALTRKQEKRSKAAFDQLLEGLSGPPLHVYYASDGGNAANLAKRLAARASARGLKATVLSMDDIILEELPGEENVVFITSTAGQGEFPQDGKSFWEALKNDTDLDLASLNVAVFGLGDSEYWPRKEDKHYFNKPSQDLFKRLELLSAKALIPLGLGDDQDADGFQTAYSEWEPKLWEALGVSGAAVDDEPKPVTNEDIKRESNFLRGTISENLKDTSSGGVTHANEQLMKFHGIYTQDDRDIREIRKSQGLEPYYMFMARARLPGGKTTPQQWLALDHLSDTSGNGTLKLTTRATFQIHGVLKKNLKHTLRGMNAVLMDTLAAAGDVNRNVMVSALPTNAKVHQQIADMGKLISDHFLPKTTAYHEVWLEGPEEQDDDPSWPSIFENRKDGPRKKKTLVSGNALVDIEPIYGPTYLPRKFKFNIAVPPYNDVDVLSIDVGLVAIVNPETQIVEGYNVFVGGGMGTTHNNKKTYPRLGSCLGFVKTEDIIPPLEGIVIVQRDHGDRKDRKHARLKYTVDDMGVEGFKQKVEEYWGKKFEPERPFEFKSNIDYFGWIKDETGLNHFTAFIENGRVEDTPDLPQKTGIRKVAEYMLKTNSGHFRLTGNQHLVISNITDEHVAGIKSILKTYKLDNTDFSGLRLSSSSCVGLPTCGLAFAESERFLPDIITQLEDCLEEYGLRHDSIIMRMTGCPNGCSRPWLGELALVGKAPHTYNLMLGGGYLGQRLNKLYKANVKDEEIVDYIKPLFKRYALEREEGEHFGDFCIRVGIIKPTTEGKYFHEDVSEDAY
What is the function of this protein?
Catalyzes the reduction of sulfite to sulfide, one of several activities required for the biosynthesis of L-cysteine from sulfate.
What are the official names of this protein?
Sulfite reductase [NADPH] subunit beta, Extracellular mutant protein 17.
What is the protein family that this protein belongs to?
Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ISCR_SALSV
Sequence: MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRASGRAQDAIDVKLRA
What is the function of this protein?
Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.
What are the official names of this protein?
HTH-type transcriptional regulator IscR.
Protein: ATPB_PINTH
Sequence: MRKNPLVLGVSASVETNVGRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTAGQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDAGITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEEDRLIVARARKIERFLSQPFFVAEVFTGSPGKYVGLMETIRGFQMILSGELDGLIEQSFYLVGNIDEATAKAINSSMES
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, chloroplastic, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein.
Protein: RLMM_SALEP
Sequence: MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIYECYQPEDGEKLISELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELMKFCRKFTVPLRAALRDAGVLTNYETPKRPVVHVFFIAPGCCYTGYSFAHNNSPFYMGIPRLKFPSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVTALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNAQIQARQLYHDREEVTVHVRRLWAAVGGRRDER
What is the function of this protein?
Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase M, 23S rRNA (cytidine2498-2'-O)-methyltransferase, 23S rRNA 2'-O-ribose methyltransferase RlmM.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MURB_GLUOX
Sequence: MTGSSDFPVKGLRGRLTPNAPLGPRAWFRVGGPADWLFVPEDQDDLALFLREKPATMPVTVLGACSNVIIRDGGIAGTVIRLARGFADITVQGNSLIVGAAALDITVAEHAAAAGLAGLEFLAGIPGSIGGAVRMNAGAYGSDINAVFEWADILTAEGELRRLSHDELGFAYRHSELPEGSVVIRASLRGTPDNADAIRSRIADIRASREASQPVRARTGGSTFRNPDGHKAWQLIDEAGCRGLQIGDAQVSEKHCNFLLNLGQASSADLETLGETVREKVLAQSGVDLHWEIKRIGRKSEGEQTV
What is the function of this protein?
Cell wall formation.
What are the official names of this protein?
UDP-N-acetylenolpyruvoylglucosamine reductase, UDP-N-acetylmuramate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the MurB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL332_STAAW
Sequence: MRVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTLHRETK
What are the official names of this protein?
50S ribosomal protein L33 2.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL33 family.
Protein: Y6206_STRCO
Sequence: MGFADQRFNVNLSILFTELPLLERPAAAAAAGFTAVELWWPWIDSPTPEQSELDALKSAIEDAGVQLTGLNFYAGQLPGPDRGALSIPGEESERFRANIDVAADFARSLGCTALNALYGNRVEGVDPAEQDRLALENLVLAARAADRIGAVLLVEALNKPESPRYPLVSAPAAIAVVDRVNEATGLGNAKFLMDLYHLSMNGEDLPQVIDAYAAKTGHVQIADNPGRGAPGTGSLPLEDLLDRLAKAGYDGWVGLEYKPGDDPSAQSFSWLPAGARAAR
What is the function of this protein?
Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde).
What are the official names of this protein?
Putative hydroxypyruvate isomerase.
What is the protein family that this protein belongs to?
Belongs to the hyi family.
Protein: DER_MYCVP
Sequence: MTDDGTWSDESDWELGPDDISDAIEEVSAPPPVVAVVGRPNVGKSTLVNRILGRREAVVQDVPGVTRDRVSYDASWSGQRFMVQDTGGWEPDAKGLQQLVAEQASVAMRTADAIIFVVDSVVGATAADEAAAKLLQRSGKPVFLAANKVDNERGEADAAALWSLGLGEPHPISAMHGRGVADLLDAVVDALPTISEVAGAGGGGPRRVALVGKPNVGKSSLLNRLSGDERSVVHDVAGTTVDPVDSLIEMDGKLWRFVDTAGLRRKVGQASGHEFYASVRTHGAIDAAEVAIVLVDASQPLTEQDQRVLSMVVEAGRALVLAFNKWDLVDEDRRYLLDREIDLQLAQLQWAPRVNISAKTGRAVQKLVPALETALKSWDTRVSTGRLNTFFKEIVAATPPPVRGGKQPRILFATQATARPPTFVLFTTGFLEAGYRRFLERRLRETFGFEGSPIRINVRVREKRGPKARR
What is the function of this protein?
GTPase that plays an essential role in the late steps of ribosome biogenesis.
What are the official names of this protein?
GTPase Der, GTP-binding protein EngA.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
Protein: HTPX_STRZT
Sequence: MLFDQIASNKRKTWILLLVFFLLLALVGYAVGYLFIRSGLGGLVIALIIGFIYALSMIFQSTEIVMSMNGAREVDEQTAPDLYHVVEDMALVAQIPMPRIFIIDDPALNAFATGSNPQNAAVAATSGLLAIMNREELEAVMGHEVSHIRNYDIRISTIAVALASAITMLSSMAGRMMWWGGAGRRRSDDDRDGNGLEIIMLVVSLLAIVLAPLAATLVQLAISRQREFLADASSVELTRNPQGMINALDKLDNSKPMSRHVDDASSALYINDPKKGGGFQKLFYTHPPISERIERLKQM
What are the official names of this protein?
Protease HtpX homolog.
What is the protein family that this protein belongs to?
Belongs to the peptidase M48B family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RL34_ACIET
Sequence: MKRTYQPSKTRRARTHGFLVRMKTRGGRAVINARRAKGRKRLAV
What are the official names of this protein?
50S ribosomal protein L34.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL34 family.
Protein: PDXS_SALTO
Sequence: MPDSQTSNSSTNAPVTGTAHVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPSDIRAQGGVSRMSDPDMIDSIMDAVSIPVMAKVRIGHFVEAQILQSLGVDYVDESEVLTPADYANHVDKWAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRGIRTEIRRLQSLPTDELYLAAKDLQAPYELVKEIAETGKLPVVLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSDNPAHRAAAIVKATTFHDDPETLAKISRGLGEAMVGINAGTLSQSDRLAERGR
What is the function of this protein?
Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia.  The ammonia is provided by the PdxT subunit.  Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively.
What are the official names of this protein?
Pyridoxal 5'-phosphate synthase subunit PdxS, PLP synthase subunit PdxS, Pdx1.
What is the protein family that this protein belongs to?
Belongs to the PdxS/SNZ family.
Protein: TUSC_PHOLL
Sequence: MKKIAFIFTKTPHGDAGGREGLDALLATSALTEKVGVFFISDGVLQLLPNQQPDRILARNYIATFKVLPLYDIEECYLCQEDLVMRGLSSVNHFVLDAKVIPAETIREKLVDYDVVLTF
What is the function of this protein?
Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.
What are the official names of this protein?
Protein TusC, tRNA 2-thiouridine synthesizing protein C.
What is the protein family that this protein belongs to?
Belongs to the DsrF/TusC family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PUR7_ECOL5
Sequence: MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSLGGLIEAYEAVARRLGVQLD
What are the official names of this protein?
Phosphoribosylaminoimidazole-succinocarboxamide synthase, SAICAR synthetase.
What is the protein family that this protein belongs to?
Belongs to the SAICAR synthetase family.
Protein: RL5_LATSS
Sequence: MTNRLKEKYVKEMTPALIEKFNYTSSMQVPKIEKIVLNMGVGDAVSNAKNLDKAVEELGLIAGQKPLITKAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVNVSLPRVRDFHGVSAKSFDGRGNYTLGVREQLIFPEIDYDKVDRVRGLDVVIVTTSNTDEEARELLTQFGMPFAK
What is the function of this protein?
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.  In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement.  Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
What are the official names of this protein?
50S ribosomal protein L5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
Protein: KDSB_SALA4
Sequence: MSFVVIIPARFSSTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAVPIHSAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAKSLETVGDTCLRHLGIYGYRAGFIRRYVSWQPSPLEHIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDLERVRAEMR
What is the function of this protein?
Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
What are the official names of this protein?
3-deoxy-manno-octulosonate cytidylyltransferase, CMP-2-keto-3-deoxyoctulosonic acid synthase, CKS, CMP-KDO synthase.
What is the protein family that this protein belongs to?
Belongs to the KdsB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PYREL_METJA
Sequence: MREIMNKELLKKVIELKSNGLTIGEIAEELNVSMETARYLVLNAEKLLKEEEKAIKLENVDIFIDWKNIGSSANRLKYISSIIVDILKSRNIEFDTVVGVSTSGVPIATLVASELGKELTIYIPKKHISEEGKKITGSISQNFSAVNYKRAVIIDDVVTSGSTLKECIKQLKEVCSPKLVVVLIDKSGLDEIEGVPLIPLIRIGAVNVEQK
What are the official names of this protein?
PyrE-like protein.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family.
Protein: DCDA_PSEAE
Sequence: MDTFSYRDAELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLALAEGDLLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESLLPQ
What is the function of this protein?
Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.
What are the official names of this protein?
Diaminopimelate decarboxylase, DAP decarboxylase, DAPDC.
What is the protein family that this protein belongs to?
Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
Protein: ACCA_ROSDO
Sequence: MTQYMDFEKPLAEIEGKAEELRALARANEEMDVTDEASALDAKARKMLEELYGALTPWRKCQVARHPERPHCQDYINALFTDYTPLAGDRNFADDHAILGGLARLQDRPVMVIGHEKGNDTKSRIERNFGMARPEGYRKAIRLMEMADRFNLPVVTLVDTPGAYPGKGAEERGQSEAIARSTEKCLQIGVPLVSVVIGEGGSGGAVAFATANRVAMLEHSVYSVISPEGCASILWKDAEKMREAAEALRLTAQDLKQLGVIDRIIPEPLGGAHRHKETTIASVGAALGEMIAELSAMDRAALITERRNKFLELGSKGLAA
What is the function of this protein?
Component of the acetyl coenzyme A carboxylase (ACC) complex.  First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
What are the official names of this protein?
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, ACCase subunit alpha, Acetyl-CoA carboxylase carboxyltransferase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the AccA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LGT_BURO1
Sequence: MIIHPNFDPVAIHLGPLAVRWYGLMYLVGFIAAIVVGRIRLKLPYVAAQGWTAKDIDDMMFYGVLGTVLGGRLGYVLFYKADFYFSHPLDVFKVWEGGMSFHGGFLGVTLAMMLFAWQRKRHWLQVTDFVAPMVPLGLAAGRLGNFINGELWGRVTDPTAPWAMLFPGAMRDDAAWLPKHPELVEKWHLADVFMQYQMLPRHPSQLYEIALEGIALFFVLFLFARKPRPMGAISALFLIGYGLARFTVEFAREPDDFLGLLALGLSMGQWLSLPMILAGIAMMVWAYRRRAANAAA
What is the function of this protein?
Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
What are the official names of this protein?
Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase.
What is the protein family that this protein belongs to?
Belongs to the Lgt family.
Protein: RIMM_LEPBJ
Sequence: MTEGWISLGQLGKPFGIKGWLRFNVRDSILTKVKLPVRLKLGKSDPNFPETEIILLEIRPHNGKFVVRFEGIATPEEAEKWVGGILFLPQNLLPKIETKDEFYVRDLIGLQAIDEFGKSLNWKLTDIQDNPAHPILVFSKSEEEEILIPFLHVFVGELNLEKKTIVLIQPELWNEV
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PTHP_BUCAI
Sequence: MFQNQVKITAPHGLHTRPAAQFVKEAKKFTSEISIIYNGKSVNAKSLFKIQTLGLIQGSLITLSAEGEDEKKAIEHLSLIMTELE
What is the function of this protein?
General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS).  This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane.  The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I.  Phospho-HPr then transfers it to the PTS EIIA domain.
What are the official names of this protein?
Phosphocarrier protein HPr, Histidine-containing protein.
What is the protein family that this protein belongs to?
Belongs to the HPr family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PUR9_PSEA8
Sequence: MTDQTTRLPIRRALISVSDKTGVVDFARELVALGVEILSTGGTYKLLRDNGISAVEVADYTGFPEMMDGRVKTLHPKVHGGILGRRDLDGAVMEQHGIKPIDLVAVNLYPFEATVARPDCDLPTAIENIDIGGPTMVRSAAKNHKDVAIVVNAGDYAAVIESLKAGGLTYAQRFDLALKAFEHTSAYDGMIANYLGTIDQTRDTLGTADRGAFPRTFNSQFVKAQEMRYGENPHQSAAFYVEAKKGEASVSTAIQLQGKELSFNNVADTDAALECVKSFLKPACVIVKHANPCGVAVVPEDEGGIRKAYDLAYATDSESAFGGIIAFNRELDGETAKAIVERQFVEVIIAPKISAAAREVVAAKANVRLLECGEWPAERAPGWDFKRVNGGLLVQSRDIGMIKAEDLKIVTRRAPTEQEIHDLIFAWKVAKFVKSNAIVYARNRQTVGVGAGQMSRVNSARIAAIKAEHAGLEVKGAVMASDAFFPFRDGIDNAAKAGITAVIQPGGSMRDNEVIAAADEADIAMVFTGMRHFRH
What are the official names of this protein?
Bifunctional purine biosynthesis protein PurH.
What is the protein family that this protein belongs to?
Belongs to the PurH family.
Protein: PK1_CAEEL
Sequence: MKAFSSYDEKPPAPPIRFSSSATRENQVVGLKPLPKEPEATKKKKTMPNPFMKKNKDKKEASEKPVISRPSNFEHTIHVGYDPKTGEFTGMPEAWARLLTDSQISKQEQQQNPQAVLDALKYYTQGESSGQKWLQYDMMFIDDAPSRTPSYGLKPQPYSTSSLPYHGNKIQDPRKMNPMTTSTSSAGYNSKQGVPPTTFSVNENRSSMPPSYAPPPVPHGETPADIVPPAIPDRPARTLSIYTKPKEEEEKIPDLSKGQFGVQARGQKAKKKMTDAEVLTKLRTIVSIGNPDRKYRKVDKIGSGASGSVYTAIEISTEAEVAIKQMNLKDQPKKELIINEILVMRENKHANIVNYLDSYLVCDELWVVMEYLAGGSLTDVVTECQMEDGIIAAVCREVLQALEFLHSRHVIHRDIKSDNILLGMDGSVKLTDFGFCAQLSPEQRKRTTMVGTPYWMAPEVVTRKQYGPKVDVWSLGIMAIEMVEGEPPYLNENPLRAIYLIATNGKPDFPGRDSMTLLFKDFVDSALEVQVENRWSASQLLTHPFLRCAKPLASLYYLIVAAKKSIAEASNS
What is the function of this protein?
Required for hypodermal cell fusion, together with cdc-42 and ced-10, leading to embryonic body elongation, which involves dramatic cytoskeletal reorganization (PubMed:8824291).  Plays a redundant role with max-2 in dorsal axonal guidance in ventral cord commissural motoneurons and in P neuroblast migration.  Acts probably downstream of Rho GTPases mig-2 and ced-10 to regulate these 2 processes (PubMed:17050621).  Involved in orientating axonal growth of HSN neurons (PubMed:18499456).  During gonad morphogenesis and probably in association with pix-1 and git-1, involved in the migration of distal tip cell (DTC) and in maintaining their sharp tapering morphology.  In addition, plays a redundant role with max-2 in DTC-mediated guidance of gonad elongation (PubMed:19023419, PubMed:19797046).  May phosphorylate mlc-4 (PubMed:19675126).
What are the official names of this protein?
Serine/threonine-protein kinase pak-1, CePAK, p21-activated kinase 1, PAK1.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein. Cytoplasm. Cell projection, axon. Perikaryon. Note=Co-localizes with ced-10/rac-1 and cdc-42 at hypodermal cell boundaries during embryo elongation (PubMed:8824291). Preferentially enriched at pharyngeal muscle cells boundaries (PubMed:9535804). In CAN neurons, detected in the cell bodies and along the axons (PubMed:9535804). Remains diffused in the cytoplasm during distal tip cell (DTC) migration (PubMed:19023419).
Protein: RPOC_CLONN
Sequence: MWREDLPLIELNNFEALQIGLASPEQIREWSRGEVKKPETINYRTLKPEKDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDMSPRSLEKVLYFASYVVLDPKETPLLKKQLLSEKEYRESVDKYGEEAFDAEMGAEAVKKLLAEIDLEQLSKELKEALKTSTGQKKVRTIRRLEVVESFRKSTNRPEWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVESGAAHNIKSSKKMVERVMPQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAANNILKPSDGKPVCVPTQDMILGSYYLTLDKDGVKGEGKIFSNPDEVMMAYQTGAINIHAKIKVRMTKEKDGKIISGIIETTPGKLIFNDSIPQDLGFVDRSNPENEFKLEIDFLVTKKNLGKIIDKCYTKYGATETSTMLDKIKARGYHYSTIGAITISVSDMTVPESKNRLLSDTDLAVEKIEKMYRRGFISEDERYERVIEKWTQTTEDVANALMDNLDRFNPIFMMADSGARGSKSQIKQLAGMRGLMANPSGKIIELPIRASFREGLDVLEYFISTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREEDCGSTHGYEVSEIKEGNEVIETLTERLTGRYSIEDIVDPQTGEVIVPADTYMNADLAEKVEKHGVKKVNIRSVFTCKSKHGVCAKCYGMNMATANKINIGESVGIVAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIITEVAGTVKLEETKKKRIVHVIDDEGVDKSYDIPFGSRIKVSNGSRIEAGDEITEGSVNPHDILAIKGPKEVKNYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKVKIKESGDTELLPGTLVDVFDFEEVNEKIRQQGGEEATGDIALLGITKAALATDSFLSAASFQETTRVLTDAAIKGKSDPLLGLKENVIIGKLIPAGTGMMRYRSIKLNTDKEENDEELVNVDEA
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta', RNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family.
Protein: NRDI_MYCBP
Sequence: MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
What is the function of this protein?
Probably involved in ribonucleotide reductase function.
What are the official names of this protein?
Protein NrdI.
What is the protein family that this protein belongs to?
Belongs to the NrdI family.
Protein: YTCA_ECOL6
Sequence: MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPGWFFCAIASLILTLITRRIIQRTNINLAFVGIIYTALFALYAMLFWLAFF
What are the official names of this protein?
Uncharacterized protein YtcA.
What is the protein family that this protein belongs to?
Belongs to the YtcA family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor. Membrane; Multi-pass membrane protein.
Protein: RS8_TRIV2
Sequence: MAANDTIADMLTRIRNANMARHQTTLVPATKMTRSIAKVLQEEGFIAEISEEGDEVKRNLVIALKYKGKNRQPLITALKRVSKPGLRVYSNRKELPRVLGGIGIAIISTSSGIMTDREARRQNLGGEVLCYVW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.