PharMolix/UniProtQA huggingface dataset:
Protein: CAPSD_HBVF6
Sequence: MDIDPYKEFGASVELFSFLASDFFPSVRDLLDTASALYRDALESPEHCTPNHTALRQAILCWGELMTLASWVGNNLEDPAARDLVVNYVNTNMGLKIRQLLWFHISCLTFGRETVLEYLVSFGVWIRTPPAYRPPNAPILSTLPETTVVRRRGRSPRRRTPSPRRRRSQSPRRRRSQSPASQC
What is the function of this protein?
Self assembles to form an icosahedral capsid.  Most capsids appear to be large particles with an icosahedral symmetry of T=4 and consist of 240 copies of capsid protein, though a fraction forms smaller T=3 particles consisting of 180 capsid proteins.  Entering capsids are transported along microtubules to the nucleus.  Phosphorylation of the capsid is thought to induce exposure of nuclear localization signal in the C-terminal portion of the capsid protein that allows binding to the nuclear pore complex via the importin (karyopherin-) alpha and beta.  Capsids are imported in intact form through the nuclear pore into the nuclear basket, where it probably binds NUP153.  Only capsids that contain the mature viral genome can release the viral DNA and capsid protein into the nucleoplasm.  Immature capsids get stuck in the basket.  Capsids encapsulate the pre-genomic RNA and the P protein.  Pre-genomic RNA is reverse-transcribed into DNA while the capsid is still in the cytoplasm.  The capsid can then either be directed to the nucleus, providing more genomes for transcription, or bud through the endoplasmic reticulum to provide new virions.
What are the official names of this protein?
Capsid protein, Core antigen, Core protein, HBcAg, p21.5.
What is the protein family that this protein belongs to?
Belongs to the orthohepadnavirus core antigen family.
What are the subcellular locations of this protein?
Virion. Host cytoplasm.
Protein: URED1_SACEN
Sequence: MRATAALRVELAADGRNVVRELRSQPPITLIPRRGVASAAGGPAVVHLVGSATSPMGGDRVDLRVHVGAGAALRLSGTAATVALPGQRTGHSRATVRIEVEAGGTVEYLPEATVVSGRADHRADMRVELAEHARARCREVLVLGRYGERPGVLTTSTHVVRAGTPLLRQRLDIGEQRLAASAGYLAGARVLAAETVVWDHDPAAPAGGQWWSLAPLSGGGALATSVAADAVTAQRGLAEALGHHPDAEALTRELW
What is the function of this protein?
Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
What are the official names of this protein?
Urease accessory protein UreD 1.
What is the protein family that this protein belongs to?
Belongs to the UreD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PDXA_ECOLU
Sequence: MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
What is the function of this protein?
Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L-threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
What are the official names of this protein?
4-hydroxythreonine-4-phosphate dehydrogenase, 4-(phosphohydroxy)-L-threonine dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the PdxA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FOXE3_RAT
Sequence: MDAHVAFSGFPTLPSVSPSGPQPPSLAGDEPGREPEEVVGGGDSEPPAAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRTELPAPPPPPFPYAPFPPAPAPAPAPPARLFRLDSLLGLQTEPPGPLAPEPPCCAAPDASFPPCAAAASPPLYSPAPERLGLPAPLPAEPLLALAGSAGALGPLGAGEAYLRQPGFPPGLERYL
What is the function of this protein?
Transcription factor that controls lens epithelial cell growth through regulation of proliferation, apoptosis and cell cycle (By similarity).  During lens development, controls the ratio of the lens fiber cells to the cells of the anterior lens epithelium by regulating the rate of proliferation and differentiation (By similarity).  Controls lens vesicle closure and subsequent separation of the lens vesicle from ectoderm (By similarity).  Controls the expression of DNAJB1 in a pathway that is crucial for the development of the anterior segment of the eye (By similarity).
What are the official names of this protein?
Forkhead box protein E3, Forkhead-related protein FKHL12, Forkhead-related transcription factor 8, FREAC-8, Hepatocyte nuclear factor 3 forkhead homolog 7, HFH-7.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL1_ACTP7
Sequence: MAKLTKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGIIHTTIGKADFAPEQLKDNLVALLAALNKAKPTTAKGIFIKKVSISTTMGAGVAVDQASL
What is the function of this protein?
Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.
What are the official names of this protein?
50S ribosomal protein L1.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL1 family.
Protein: PSBF_CONAR
Sequence: MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR
What is the function of this protein?
This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Cytochrome b559 subunit beta, PSII reaction center subunit VI.
What is the protein family that this protein belongs to?
Belongs to the PsbE/PsbF family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: RISB_BACVZ
Sequence: MNIIQGNLVGTGLKIGIVVGRFNEFITSKLLSGAEDTLLRHGVESNDIDVAWVPGAFEIPFAAKKMAETKKYDAVITLGTVIRGATTHYDYVCNEAAKGIAQAGTATGVPVIFGIVTTETIEQAIERAGTKAGNKGADCAVSAIEMANLNRSFE
What is the function of this protein?
Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate.  This is the penultimate step in the biosynthesis of riboflavin.
What are the official names of this protein?
6,7-dimethyl-8-ribityllumazine synthase, DMRL synthase, LS, Lumazine synthase.
What is the protein family that this protein belongs to?
Belongs to the DMRL synthase family.
Protein: SYDND_LEGPL
Sequence: MRTHYCSAVNELSLDKQITVCGWVHNRRDHGGVIFLDIRDRSGLLQVVYEPENKEIFAIAEKLRSEFVVRVTGIVRKRPEGMINDKMETGRVEVIGTQLEILNQSPTPPFLPDDHQVINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKATPEGARDYLVPSRVHPGQFYALPQSPQLFKQLLMMSGFDKYYQIVRCFRDEDLRADRQPEFTQLDIEMAFINEEDILQLIEGLLKIVFKEILNITLPDKLPRMPYKEAMTRYGSDKPDLRNPLELIDIADLVKNCDFNVFASAANDNSGRVVALKLPNGCDLSRKDLDNYGQFVTIYGAKGLAYIKVNDLSAGMAGLQSPILKFLSETAVQSILNRVEVQTGDVIFFGADKAHVVNESMGALRNKLGHDRNLINSGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVINGYEIGGGSIRIHQPELQKTVFDLIGIDEQEAHEKFGFLLDALQYGAPPHGGIALGIDRLAMLLTDSTSIRDVIAFPKTQTASCPLTSAPSPAGNAQLTELGIRLAPTITTK
What is the function of this protein?
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn).  Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
What are the official names of this protein?
Aspartate--tRNA(Asp/Asn) ligase, Aspartyl-tRNA synthetase, AspRS, Non-discriminating aspartyl-tRNA synthetase, ND-AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RIMM_CORU7
Sequence: MPDLQIGRVIKPHGVKGEVVVDPSTDHVPERFAIGEALRAVQTGKERQLTVTGMRRHQNRLLVTFEEIRDRDEAESLRGARFMAAPLHDDSDDGYYDHELIGLRVLNVGSVDADTANRRAYEGEQPEPVDIGEVTGVSHGPAGATLEVAVDADADLPTAGSTILIPFKLAIVPIVDLDNEALVVTPPEGLLELA
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ATCAY_HUMAN
Sequence: MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTLNFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMIRPYMKVVTHGGYYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEEKPEVAPVENRSALVSEDQETSMS
What is the function of this protein?
Functions in the development of neural tissues, particularly the postnatal maturation of the cerebellar cortex.  May play a role in neurotransmission through regulation of glutaminase/GLS, an enzyme responsible for the production in neurons of the glutamate neurotransmitter.  Alternatively, may regulate the localization of mitochondria within axons and dendrites.
What are the official names of this protein?
Caytaxin, Ataxia cayman type protein, BNIP-2-homology, BNIP-H.
What are the subcellular locations of this protein?
Cell projection, axon. Cell projection, dendrite. Presynapse. Mitochondrion. Cell projection, growth cone. Cytoplasm.
Protein: Y032_MYCPN
Sequence: MKKLLVIVYPDMNDVEYTNTMVVFGFVKELQTVIYHPNLSTVKGSNGVTLVNQITSKVNLEEFDGVFIPGGMGATKVLDHDQQLLDTIRYFKDHDKYVFAICDTPNVL
What are the official names of this protein?
Uncharacterized protein MG029 homolog.
Protein: COAD_CLOBB
Sequence: MKIAVYPGSFDPITNGHLDIIERGSKVFDKLIIGVLVNVDKKGLFEIEERVELIKKVTKHIKNVEVLSFNGLLIDFLKASNAKIILKGLRAVSDFEYEFKMALMNNKLDPDIETVFMMTSAQYSYLSSSSVKQVAKFGGCIEGLVPKEIISDVIRRSKI
What is the function of this protein?
Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
What are the official names of this protein?
Phosphopantetheine adenylyltransferase, Dephospho-CoA pyrophosphorylase, Pantetheine-phosphate adenylyltransferase, PPAT.
What is the protein family that this protein belongs to?
Belongs to the bacterial CoaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CCM1_ASHGO
Sequence: MILKSELLDVHTRLGQMLPFVTKRFASVPTAMRTRRRTRRHEREPNLRKRQGGSHSNLKENEDAELKFKLRQMNEFAKNLKMQMQLADSLRRKEEAARAEGIGGDVAEGAIERDSSTVAAALLEGAEPAEAQPAPLNLSQLIMSAQNAEPLLAPELAERIGDGKLVYSALVNKRAQNWDAIVAALYESAEKLRGLDADIVKEKLLLRVSGLSLEGVATLDKLLTDRFGEGRDFDVDMYGVLFETLGEHTQHTQQAKTVVDRMKKLLQRYDACDDPDKKPLTQEILNCCLKVGTAAKSFDDMNYFLSKFVKDYRILPNKVNYDQVLTFYLKNRTLSQAWETFGAMKFMSLSHRPDVATYNLMLQVCDQERNYSKALDLYHEIQDLKMEPDVRTLSMLAKAMASASTDAIVSEGKSDSLRLTGWKFIHEIENNPKYATAKDDPVCAHGVLTTMMALASYDGDVGLARALFYRHAVQSYKKLMKNANMDAVSNPAAAARAAWTQAIDPVLFNYLLMAYSRYQPNKLPILLGYELGAKFRRQLMFNVDYMGRAESDNDMHANIPLLPVMELSSTAEVLNESRALWEFFLSKHINGSLQPQPSARVVSMLEEYRQNHDTFEGFMKEVKSQVKRWQWHAVNRRLMTPITIMSYLSIPLRLGSYEEFAFRYKQTIYTGNELEESVKNFYDPALVTVSDEATVVVDDSEVKVEKYARKIDDRILQIYSFAYKNRVYNDVFELAMKAATKFRDNSLATRVWKERGEFRKTEGYTSMSVKDRIAGDTSFACATVKFFVAEKRFSEAMAVIMSSQKYIDWKYHMVRELHNALVSIEDSVSIRKLLSVVNKQNRLKVLNTESPSLTP
What is the function of this protein?
RNA-binding protein involved in the specific removal of group I introns in mitochondrial encoded transcripts.  Maintains the stability of the small subunit mitochondrial 15S rRNA and thus the expression of the mitochondrial genome (By similarity).
What are the official names of this protein?
Mitochondrial group I intron splicing factor CCM1.
What is the protein family that this protein belongs to?
Belongs to the CCM1 family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: SURE_BURPS
Sequence: MRILLSNDDGYLAPGLAALYEALRPLAEILVMAPEQNCSGASNSLTLSRPLSVSRSAATGFYYVNGTPTDSVHVALTGMLDTKPDLVVSGINNGQNMGDDTLYSGTVAAATEGIMFGVPAIAFSLVHKEWAHLGDAARVAAEIVRHYLDHPLPGQPLLNINIPNLPYEELKGWRVTRLGKRHPSQPVIRQTNPRGEPIYWIGAAGDALDASEGTDFHATASGYVSITPLQLDLTHTQMLAATRDWARAGSGAS
What is the function of this protein?
Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates.
What are the official names of this protein?
5'-nucleotidase SurE, Nucleoside 5'-monophosphate phosphohydrolase.
What is the protein family that this protein belongs to?
Belongs to the SurE nucleotidase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL30_MOOTA
Sequence: MANLRITLVKSLIGRPETERKTARAMGLKKLHRQVVCPDTPVTRGQVQKLAHLVRVESIE
What are the official names of this protein?
50S ribosomal protein L30.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL30 family.
Protein: BLAB_SERMA
Sequence: MSKLSVFFIFLFCSIATAAESLPDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQATNSFSGVNYWLVKNKIEVFYPGPGHTPDNVVVWLPERKILFGGCFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSN
What is the function of this protein?
Confers resistance to the different beta-lactams antibiotics (penicillin, cephalosporin and carbapenem) via the hydrolysis of the beta-lactam ring.
What are the official names of this protein?
Metallo-beta-lactamase type 2, B2 metallo-beta-lactamase, BLA-IMP, IMP-1, Beta-lactamase type II, Metallo-beta-lactamase type II.
What is the protein family that this protein belongs to?
Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family.
What are the subcellular locations of this protein?
Periplasm.
Protein: URE3_STAA8
Sequence: MHFTQREQDKLMIVVAAEVARRRKARGLKLNHPEALALISDELLEGARDGKTVAELMSYGRQILNKEDVMDGVEHMITDIEIEATFPDGTKLITVHHPIV
What are the official names of this protein?
Urease subunit gamma, Urea amidohydrolase subunit gamma.
What is the protein family that this protein belongs to?
Belongs to the urease gamma subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NUFP1_MOUSE
Sequence: MAEPAPAVWPSAPDLTPAPGTPSEAAPPRDNWVYWAMLPPPPPPLSSPVAGSEQSRKGQPHVLPQPPSGALPPFDAQILPAAQPPFDAQAPPDAQSQFSGQQAWNLQASTPWYWGLSPNGFSTYHTSYQSPVTHSYFPRSHDAKFNLPQNRKQKTKKRKEPVFHFFCDTCDRGFKNQEKYDTHMSEHTKCPEVDCSFSAHEKIVQFHWRNMHAPGMKKIKLDTPEEIARWREERRKNYPTLANIERKKKLQLEKAKRGEVLTTTQYGKMKGMSRHSQMAKIRSPGKHHKWRRGGARQRAVVGLGNHARDSKPEVPSKANVDPLGALIHSDSESDKEEKAQRTVVPKEVTPALCSLMSSYGDVSGSDSEPEEAPIKTEAEVLAENHVLHSSPPKSPKQNVQTTGRTVSRSKWENQRNGLRKISLKRKKSHCHPLFEPRTHHPYLLEMLLAPDIRHERNVILQCVRYIIKKDFFGLNTDSVKTEEV
What is the function of this protein?
Binds RNA.
What are the official names of this protein?
FMR1-interacting protein NUFIP1, Nuclear FMRP-interacting protein 1.
What are the subcellular locations of this protein?
Nucleus. Note=Distributed in the nucleus in a dot-like pattern.
Protein: PYRB_HALLT
Sequence: MRQDHLITATQLSRDDIEAVLDRAREVADDPAAYADRHAGSVLALCFFEPSTRTRMSFDSAAKRLGMNTIGMGDVDSSSVSKGESLSDTVRVIEGYADALVLRHPSEGAATLAAERVSVPVVNAGDGAGQHPSQTLLDLHTIRENHGLDDLTVGIMGDLKYGRTVHSLAAALTEFDANQHFISPESLRLPRSVRFDLHETGAQVREHTDLEGVLGELDVLYVTRIQKERFPDENEYHRVAGEYQIDAETLEDAPDDLTVMHPLPRVDEIAPDVDETDHATYFEQAHNGIPVRMALLDILLENAEGDEGMEVDR
What are the official names of this protein?
Aspartate carbamoyltransferase, Aspartate transcarbamylase, ATCase.
What is the protein family that this protein belongs to?
Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
Protein: DAPA_PROM5
Sequence: MIPNNTQFSNPIFGRILTAMVTPFKENGGVDYELAIKLANHLCENGSDGIVLCGTTGESPTLSWDEQHNLFVAVKSSLNSRSKVIVGTGSNCTSEAIEATKKAYEFGADGALVVVPYYNKPPQEGLYNHFSSIATAASDLPLMLYNIPGRTGCNLLPTTVNKLMNFPNILSIKAASGRIEEVTELRAACGPKLFIYSGDDSLLLPMLSVGAVGVVSVASHIVGLQLKMMIESFQKGEFSIALDIHEKLQPLFKALFETTNPIPIKAALELTGWQVGSPRNPLTPLIKEKKDNLFQIIQNLSL
What is the function of this protein?
Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
What are the official names of this protein?
4-hydroxy-tetrahydrodipicolinate synthase, HTPA synthase.
What is the protein family that this protein belongs to?
Belongs to the DapA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YHAJ_BACSU
Sequence: MNCWKTINLMKDYGAVRIILTAVCFMILVFISTFLAFELLRPGTSLSDEYVSLFGGLLVVILFVHKVIHVLPIICKKRKIEKKFYILRMRTWKRIPKTTMLISLVSPFLLITPVLFYAALAFPNHAHYFCMISGIHAGYCLPDFLLALKLIKAPKTAFIDQEADGLDILVEK
What are the official names of this protein?
Uncharacterized membrane protein YhaJ.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RL10_BORHD
Sequence: MHTKINPKKVEMFNSLKEFLDGKDNIFFLDYRGLTVAKLTELRNKVENEKGELKVVKNNIMKRVLKDRHMEGLDSYLLGPTAVVTAVDEANVIAKIFYEFVKTSTLKVKGGFVLGEVYDEAKLNAYSQLPTKKEAISLFMSVLKAPMSKLARTLKALSDVKVES
What is the function of this protein?
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL10 family.
Protein: RS12_THEPD
Sequence: MPGSKSPRGMFAARKLELKRKKFRWSDLEYKRRILQLKKKVDPLEGAPQARGIVVEKVGIESRQPNSAVRKCVRVQLLKNGKVVTAFLPGDGALLFVNEHDEVVIEGIGGPEGRAYGDLPGVRWKVIKVNGVSLKEILRGRKQKPTR
What is the function of this protein?
With S4 and S5 plays an important role in translational accuracy.  Located at the interface of the 30S and 50S subunits.
What are the official names of this protein?
30S ribosomal protein S12.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS12 family.
Protein: LPXD_METRJ
Sequence: MSDPVFFTAAATGLTLAEIAAAAGTGLPEGADPDRRFSGAASLESAGPDHLAYMDNARYGDALAATRAGACLVSPRFAARCPAGTVALVSRDPYRAYAALLGRLHPDALRPGSQFAVRGVAPGAHVHPEARLEDGVTVDPGAVIGPGAEIGAGTVVGPNAVIGPGVRIGRDCAIGAGTTLSHALLGNRVIVHPGARLGQDGFGFAMGATHLKVPQVGRVIVQDDVEIGANTTVDRGASRDTVIGEGTKIDNLVQIAHNVVIGRHCVIVSGVGISGSTTLEDYVVLGGQVGVVGHLRIGRGSQIAGSSNVNRDVPPGSRWGGTPAKPVRAWFRELTTLARLAERSGKDQAGDDA
What is the function of this protein?
Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor.  Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
What are the official names of this protein?
UDP-3-O-acylglucosamine N-acyltransferase.
What is the protein family that this protein belongs to?
Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
Protein: RL20_WOLSU
Sequence: MPRVKTGTVRRQRHKKVLKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKRDFRSLWITRINAACRINEISYSRFMHGLKLANIELDRKILADMAMNEPANFAKIVEAAKKAL
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
Protein: NEF_HV1LA
Sequence: MGGKWSKSSVVGWPAVRERMRRAEPAADGVGAVSRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPEPGVRYPLTFGWCYKLVPVEPDKVEEANKGENTRLLHPVSLHGMDDPEREVLEWRFDSRLAFHHVARELHPEY
What is the function of this protein?
Extracellular Nef protein targets CD4(+) T-lymphocytes for apoptosis by interacting with CXCR4 surface receptors.
What are the official names of this protein?
Protein Nef, 3'ORF, Negative factor, F-protein.
What is the protein family that this protein belongs to?
Belongs to the lentivirus primate group Nef protein family.
What are the subcellular locations of this protein?
Host cell membrane; Lipid-anchor; Cytoplasmic side. Virion. Secreted. Host Golgi apparatus membrane. Note=TGN localization requires PACS1. Associates with the inner plasma membrane through its N-terminal domain. Nef stimulates its own export via the release of exosomes. Incorporated in virions at a rate of about 10 molecules per virion, where it is cleaved.
Protein: AGP7_ARATH
Sequence: MNSKIIEAFFIVALFTTSCLAQAPAPSPTTTVTPPPVATPPPAATPAPTTTPPPAVSPAPTSSPPSSAPSPSSDAPTASPPAPEGPGVSPGELAPTPSDASAPPPNAALTNKAFVVGSLVAAIIYAVVLA
What is the function of this protein?
Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.
What are the official names of this protein?
Classical arabinogalactan protein 7.
What is the protein family that this protein belongs to?
Belongs to the classical AGP family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor, GPI- anchor.
Protein: SSB2_STRAW
Sequence: MNETIVCVVGNVATRPVYRELASGASARFRLAVTSRYWDREKSEWKDGHTNFFTVWANRALATNVGASLSVGDPVVVQGRLKVRTEAREGQNWTSADIDALAVGHDLSRGTSAFRRPSAKDGEAGVSPAARPEPNWETEPGSQPSVEHQPQPEPAGVT
What are the official names of this protein?
Single-stranded DNA-binding protein 2, SSB 2.
Protein: EFTS_HAEIG
Sequence: MAEITASLVKELRDRTGAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRVAAEGVILARVENGFGVLVEMNCETDFVAKDAGFLGLANEVADFAAANKGTTIEALQAQFEEKRAALVAKIGENMNIRRVAYLDGQVIAQYLHGAKIGVLVAGEGSDDELKKVAMHVAASKPEFVNPEDVSAEVVEHERQIQIDIAINSGKPKEIAEKMVEGRMKKFTGEVSLTGQAFVMDPSVSVGDFLKSVNTSVSNFIRLEVGEGIEKKEEDFAAEVAKITGGNA
What is the function of this protein?
Associates with the EF-Tu. GDP complex and induces the exchange of GDP to GTP.  It remains bound to the aminoacyl-tRNA. EF-Tu. GTP complex up to the GTP hydrolysis stage on the ribosome.
What are the official names of this protein?
Elongation factor Ts, EF-Ts.
What is the protein family that this protein belongs to?
Belongs to the EF-Ts family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL6_THESQ
Sequence: MSRLAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNENQIIRKSDWRKIKMFQGTYWSLIRNMVVGVTEGYKKELEIVGIGYRAQLQGNTVVMNLGYAHPVVYEIPSDVKIEVPAPNRIVVSGIDKQRVGQVAAEIRAFRPPNVYTGKGIRYVGEVVRQKEGKKA
What is the function of this protein?
This protein binds to the 23S rRNA, and is important in its secondary structure.  It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
What are the official names of this protein?
50S ribosomal protein L6.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL6 family.
Protein: ATPA_PROM2
Sequence: MVSIRPDEISSILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQVMAGELLEFEDGTEGIALNLEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMQGRVVNPLGQPIDGKGEIPTSDTRLIEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKSAIAIDTIINQKGQDVVCVYVAIGQKSASVANIVEVLRERGALDYTVVVSAGASEPAALQYLAPYTGAAIAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKLSDAMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDELAAFSQFASDLDEATQQQLERGKRLRELLKQPQFSPLNLAEQVAVVYAGVKGLIDEVPVEEVTKFATELREYLKLNKAEFIEEILKEKKLNDGLEATLKEVINEVKSSMLATV
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Peripheral membrane protein.
Protein: B2MG_CALKU
Sequence: MASSVVVALLVLLSLSGLEAIQHAPKIQVYSRHPAENGKPNFLNCYVSGFHPSDIEVDLLKNGKKIEKVEHSDLSFSKDWSFYLLYYTEFTPSEKDEYACRVSHVTFSTPKTVKWDRNI
What is the function of this protein?
Component of the class I major histocompatibility complex (MHC).  Involved in the presentation of peptide antigens to the immune system (By similarity).
What are the official names of this protein?
Beta-2-microglobulin.
What is the protein family that this protein belongs to?
Belongs to the beta-2-microglobulin family.
What are the subcellular locations of this protein?
Secreted.