PharMolix/UniProtQA huggingface dataset:
Protein: RS19_THET8
Sequence: MPRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYRGHGKEAKATKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, extending towards the 50S subunit, which it may contact in the 70S complex.  Contacts several RNA helices of the 16S rRNA.
What are the official names of this protein?
30S ribosomal protein S19.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS19 family.
Protein: RIMM_PSYIN
Sequence: MSKKAEPIVIGKFGAVHGIKGWLKVHSYTDDPESIFEYKPLLMKSKGQFQEVNIADWKRHSNGFVAKIVGFDVREEAQALVGLELLVDSDKLPNLEEDFYWRDLIGCQVKTDNGYDLGVVTEIMETGSNDVLVVKANSNDAFGQKERLIPFIDKQVISNVDITSKLIQVNWEPDF
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS3_THENN
Sequence: MGQKVHPRGFRLGLSADWQAKWFNEKNYKEWLLEDEEIRKIIKNKYYHAGISEIYIERPDAERVNITVKTARPGIIIGRKGAEITSLREELEKRFNRRMVINIEEIKTPELDAQLVAESIASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKIKAIIDYGTAVAWTKYGTIGVKVWIYKGDADI
What is the function of this protein?
Binds the lower part of the 30S subunit head.  Binds mRNA in the 70S ribosome, positioning it for translation.
What are the official names of this protein?
30S ribosomal protein S3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS3 family.
Protein: XPT_LISIN
Sequence: MKLLEEFIQEKGTVLPGNVLKVDAFLNHQIDPGLMQEMGKAFAERFKDLGITKIVTIESSGIAPAVFAGLALSVPVVFARKKKSVTLTDNLYTSTVYSYTKKKSNDISVSKQFLTDADTILVIDDFLANGQAALGLLEIAELAGAKVAGIGIVIEKSFQQGRELLNKTGIPVYSLARIASLENEEILFLEEE
What is the function of this protein?
Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
What are the official names of this protein?
Xanthine phosphoribosyltransferase, XPRTase.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: NA12_ANEVI
Sequence: MMNRLLVFLMLGAAFMLVVSAIDQDANEDINKRGVPCLCDSDGPSVRGNTLSGIIWLAGCPSGWHNCKKHGPTIGWCCKQ
What is the function of this protein?
Binds specifically to voltage-gated sodium channels (Nav) (site 3), thereby delaying their inactivation during signal transduction (By similarity).  Has a strong effect on crustaceans and insects and a weaker effect on mammals (By similarity).  It strongly inhibits D. melanogaster sodium channel (DmNav1) (By similarity).  It strongly affects the heart sodium channels (Nav1. 5/SCN5A) and weakly inhibits the brain sodium channel Nav1. 2/SCN2A (By similarity).  In vivo, when released into the medium, this recombinant toxin induces impaired swimming, paralysis and death of the crustacean A. nauplii within several hours (PubMed:22048953).  Its effect on zebrafish (D. rerio) larvae is much faster, since it induces paralysis or strong convulsion and impaired swimming, within 10 minutes (PubMed:22048953).
What are the official names of this protein?
Delta-actitoxin-Avd1c 1, Delta-AITX-Avd1c 1, Anemonia viridis toxin 2, Av2, Avt 2, Neurotoxin 2, Toxin 2c1, Toxin 2c4, Toxin Av2-1.
What is the protein family that this protein belongs to?
Belongs to the sea anemone sodium channel inhibitory toxin family. Type I subfamily.
What are the subcellular locations of this protein?
Secreted. Nematocyst. Note=In nematocyst, is associated with the tubule prior to discharge.
Protein: FTSK_PSESM
Sequence: MKKSTPAPSAVPLWRQQLHYRLKEGALIAFGALCLYLMMALLTYDQSDPGWSHTSSNAGQVQNAAGWAGAFCADILFMILGYFAYIFPLLLAIKTWQVFRHRHEPWQWSGWLFSWRLIGLVFLILAGAALAHIHFHFSAGFPGSAGGVLGEVLGDLAKRALNIQGSTLLFIALFLFGLTVFTDLSWFKVMDVTGKITLDLFELFQGAANRWWTARAERKQMVAQLREVDMRVNDVVAPVAPDRREQAKARERIIEREVSLSKHMTEREKHVPAVIAPAPSKPAEPSKRVLKEKQAPLFVDSAVEGTLPPISILDPAEKKQLNYSPESLAAVGHLLEIKLKEFGVEVSVDSIHPGPVITRYEIQPAAGVKVSRISNLAKDLARSLAVTSVRVVEVIPGKTTVGIEIPNEDRQIVRFSEVLSTPEYDNAKSPVTLALGHDIGGKPVITDLAKMPHLLVAGTTGSGKSVGVNAMILSILFKSGPEDAKLIMIDPKMLELSIYEGIPHLLCPVVTDMKDAANALRWSVAEMERRYKLMAKMGVRNLSGFNQKVKEAQDAGEPLADPLYKRESIHDEAPLLTKLPTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSKIDSRTIIDQGGAEQLLGHGDMLYMPPGTSLPIRVHGAFVSDEEVHRVVEAWKLRGSPDYNDDILAGVEEPGSGFDGGSSEGGEDSESDALYDEAVKFVLESRRASISAVQRKLKIGYNRAARMIEAMEMAGVVTSMNTNGSREVLAPGPVRD
What is the function of this protein?
Essential cell division protein that coordinates cell division and chromosome segregation.  The N-terminus is involved in assembly of the cell-division machinery.  The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region.  Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination.  FtsK orienting polar sequences (KOPS) guide the direction of DNA translocation.  FtsK can remove proteins from DNA as it translocates, but translocation stops specifically at XerCD-dif site, thereby preventing removal of XerC and XerD from dif (By similarity).
What are the official names of this protein?
DNA translocase FtsK.
What is the protein family that this protein belongs to?
Belongs to the FtsK/SpoIIIE/SftA family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein. Note=Located at the septum.
Protein: PHS1_CUPPJ
Sequence: MSEKLESQTCTPCRGGIPPLERAEAEALLVETPGWTLADDAGRLERSFTFRNFAQALEFVSGVGRLAEEQGHHPEISFGWGHATVSWRTKKIKGLHRNDFVMAAKTSELAAGMTQG
What are the official names of this protein?
Putative pterin-4-alpha-carbinolamine dehydratase 1, PHS 1, 4-alpha-hydroxy-tetrahydropterin dehydratase 1, Pterin carbinolamine dehydratase 1, PCD 1.
What is the protein family that this protein belongs to?
Belongs to the pterin-4-alpha-carbinolamine dehydratase family.
Protein: BCHQ_CHLTE
Sequence: MDDDSNQKPLFHMALGVLTSLTPPQHHIELVDEHFHDKINYDGDYDMVGITSRTIEATRAYEIADEFRKRGKTVVLGGLHISFNPEEAAAHADCIVVGEADNLWTTLLDDVANNRLKERYDSKDFPPVKAITPLDYARIAKASKRTKVDGTKSIPIYVTRGCPFNCSFCVTPNFTGKQYRVQDPKLLKHQIEEAKKYFFKANGKNSKPWFMLTDENLGINKKKLWESLDLLKECDITFSVFLSINFLEDPTTVKKLVDAGCNFVLAGLESIKQSTLEAYNKGHVNSAEKYSKIIEDCRKAGLNIQGNFLFNPAIDTFEDIDELVQFVKKNHIFMPIFQIITPYPGTQMYHEYRESGLITIEDWEKYNALHLVIKSDRYEPLLFQYKVLKSYVEVYTWKEILLRTLYNPRKLINLVTSIAFKKHLAAQLKAFERNHKMNPAMLSGVKPVMNG
What is the function of this protein?
Involved in the biosynthesis of the major light-harvesting pigment bacteriochlorophyll c (BChlc), which confers a significant competitive advantage to green sulfur bacteria living at limiting red and near-infrared light intensities.  BchQ is a methyltransferase that adds two consecutive methyl groups to the ethyl carbon at the C-8(2) position of 8,12-diethyl-3-vinylbacteriochlorophyllide d to yield 12-ethyl-8-isobutyl-3-vinylbacteriochlorophyllide d.
What are the official names of this protein?
Bacteriochlorophyllide d C-8(2)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VL2_HPV56
Sequence: MVAHRATRRKRASATQLYKTCKLSGTCPEDVVNKIEQKTWADKILQWGSLFTYFGGLGIGTGTGSGGRAGYVPLGSRPSTIVDVTPARPPIVVESVGPTDPSIVTLVEESSVIESGAGIPNFTGSGGFEITSSSTTTPAVLDITPTSSTVHVSSTHITNPLFIDPPVIEAPQTGEVSGNILISTPTSGIHSYEEIPMQTFAVHGSGTEPISSTPIPGFRRIAAPRLYRKAFQQVKVTDPAFLDRPATLVSADNPLFEGTDTSLAFSPSGVAPDPDFMNIVALHRPAFTTRRGGVRFSRLGRKATIQTRRGTQIGARVHYYYDISPIAQAEEIEMQPLLSANNSFDGLYDIYANIDDEAPGLSSQSVATPSAHLPIKPSTLSFASNTTNVTAPLGNVWETPFYSGPDIVLPTGPSTWPFVPQSPYDVTHDVYIQGSSFALWPVYFFRRRRRKRIPYFFADGDVAA
What is the function of this protein?
Minor protein of the capsid that localizes along the inner surface of the virion, within the central cavities beneath the L1 pentamers.  Plays a role in capsid stabilization through interaction with the major capsid protein L1.  Once the virion enters the host cell, L2 escorts the genomic DNA into the nucleus by promoting escape from the endosomal compartments and traffic through the host Golgi network.  Mechanistically, the C-terminus of L2 possesses a cell-penetrating peptide that protudes from the host endosome, interacts with host cytoplasmic retromer cargo and thereby mediates the capsid delivery to the host trans-Golgi network.  Plays a role through its interaction with host dynein in the intracellular microtubule-dependent transport of viral capsid toward the nucleus.  Mediates the viral genome import into the nucleus through binding to host importins.  Once within the nucleus, L2 localizes viral genomes to host PML bodies in order to activate early gene expression for establishment of infection.  Later on, promotes late gene expression by interacting with the viral E2 protein and by inhibiting its transcriptional activation functions.  During virion assembly, encapsidates the genome by direct interaction with the viral DNA.
What are the official names of this protein?
Minor capsid protein L2.
What is the protein family that this protein belongs to?
Belongs to the papillomaviridae L2 protein family.
What are the subcellular locations of this protein?
Virion. Host nucleus. Host early endosome. Host Golgi apparatus.
Protein: EX7S_SHIBS
Sequence: MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: BIOB_CLOBK
Sequence: MSNIIKYKKKILNGDLLTKEEVEELLEEDITDLAATANEIRESLCGNKFDLCTIINGKSGRCQENCKYCAQSAHFDTDIIEYNILNSDRIMNSAISNYNKGVHRFSVVTSGRALNNNEVDTLCKTYLKLKETCSIRLCASHGLLKYEDLKRLKDSGVTRYHNNLETSRKFFTKICTTHKYDDKIETIKNAKKAGFEICSGGIIGLGETMEDRIDMAFTLRELSVESVPVNILNPIKGTPLENQEILSYEEIIKTLALFRFILPTVQIRLAGGRTIISDKGKKALESGVNGAISGDMLTTLGIETSEDIKMIKNLGFEV
What is the function of this protein?
Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.
What are the official names of this protein?
Biotin synthase.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily. Biotin synthase family.
Protein: RS13_PARPJ
Sequence: MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEVGKFIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSLKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: LSPA_METS4
Sequence: MRPLILGLATAAATLVLDQATKLGLLLLADLPARQPVVLAPFAQLVVVWNRGVSYGLFQQHTELGRWLLVGVAVLAAAALGAWMARAGSRLLVLSLGLIVGGAVGNAVDRVAYGAVFDFVHLHAGGWSWYVFNVADAGIVAGVAGLLVETVWSEARGDAAMRPDG
What is the function of this protein?
This protein specifically catalyzes the removal of signal peptides from prolipoproteins.
What are the official names of this protein?
Lipoprotein signal peptidase, Prolipoprotein signal peptidase, Signal peptidase II, SPase II.
What is the protein family that this protein belongs to?
Belongs to the peptidase A8 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: M1_I78AC
Sequence: MSLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDRAVKLYRKLKREITFHGAKEVALSYSTGALASCMGLIYNRMGTVTTEVAFGLVCATCEHIADSQHRSHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKDDLLENLQAYQKRMGVQMQRFK
What is the function of this protein?
Determines the virion's shape: spherical or filamentous.  Clinical isolates of influenza are characterized by the presence of significant proportion of filamentous virions, whereas after multiple passage on eggs or cell culture, virions have only spherical morphology.  Filamentous virions are thought to be important to infect neighboring cells, and spherical virions more suited to spread through aerosol between hosts organisms.
What are the official names of this protein?
Matrix protein 1, M1.
What is the protein family that this protein belongs to?
Belongs to the influenza viruses Matrix protein M1 family.
What are the subcellular locations of this protein?
Virion membrane; Peripheral membrane protein; Cytoplasmic side. Host nucleus.
Protein: Y2689_PELPD
Sequence: MIKNRFILILVIVALTVSLLSFLLAFCTDWLFFVETGFTSVFTTKLYAQAGSGLLFAGVLFAGTLLNLLLAGKAVFPTYATPREAGDFRPRLDEARRLVKPLGIPACAILALLVGQWGAMQWEKLLFFVNRVSVGTTDPVMGRDIGFYLFTLPLMETITAFAGFTLLTSLFLTVLVYTVRGGICLSERGVAIDGTVRRHLAILLLLLSCVIAAGFHLDCFRLLFSSNGIFHGAGYTDVHSRLPTYRILTILAPLAGTALAIGLWKGAWRMALLAPLAVIVLHVIGIRVYPGLLQKFKVAPNELALEAPYIRNNIALTRLGFDLDKIETIPFDVDTQLSSADIARNDATIKNIRLWDHAPLLKTYSQLQQIRTYYRFFDVDNDRYLVNGRYSQVMLSPRELSYADLPSRNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIRVTRPEIYFGELSNEYVIVRTRVPEFSYPTSSGNINTTYAGTGGVPMDSLAKRMLFAARFRTEKILLSSDITSQSSIIFNRNINERVRAVAPFLHFDDDPYMVVDDRGRLKWIIDAYTFSDRLPCSKPIKGGVNYMRNSVKAVVDAYDGTLAFYISDPHDVLIRVYDRMFPGLFRPISAMPDDLRRHVRYPHHFLQLQAAMYTAYHMTDPKVFYNKENLWQVPALGEKPMEPYYTIMKLPGETAEEYILLLPFTPSKRDNLAAWLTARSDGANYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWNQRGSEVIRGSLLVIPIEKSLLYVQPLFLAADKAGLPELKRVIVAFGDQVVMEENLEQALQRLFGGKRAPEPASSATAKDSTTSPALLAKEAMAAYEKAISQQRQGNWSGYGEELRRLEQILRRMAQ
What are the official names of this protein?
UPF0182 protein Ppro_2689.
What is the protein family that this protein belongs to?
Belongs to the UPF0182 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: HEM6_LEGPC
Sequence: MPISKTLPYNAIEQIKSYLLQLQNTICVSLESIDGKTRFHEDSWQRAAGGGGKTRIMANGNVFEKAGVNFSHVSGEQLPASASAHREELAGRHFSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSEPVWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHRNEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYRRGRYAEFNLVYDRGTLFGLQSGGRTESILMSLPPIVHWEYNWHPEKGSDEEKLYTDFLPAKDWLKKE
What is the function of this protein?
Involved in the heme biosynthesis.  Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.
What are the official names of this protein?
Oxygen-dependent coproporphyrinogen-III oxidase, CPO, Coprogen oxidase, Coproporphyrinogenase.
What is the protein family that this protein belongs to?
Belongs to the aerobic coproporphyrinogen-III oxidase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y5337_MYCVP
Sequence: MAGNSQRRGAVRKAGTKKGPTVGSGGVRRRGLEGKGATPPAHQRPHHPAGKRAAKAARQAQGRHKKTDDTEIVLGRNPVLECLRAGVPATALYVALGADSDERLTESVQIAADKGIAILEVPRHDLDRIAANGMHQGIALQVPPYNYAHPDDLLAEAKSDAMPALLVALDNISDPRNLGAIVRSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARTPVARATNLTRALKQWADAGLQVVGLDADGDTTVDQIDGAGPIVVVVGSEGKGLSRLVRENCDAVVSIPMAGPTESLNASVAAGVVLAEIARQRRSA
What are the official names of this protein?
Uncharacterized tRNA/rRNA methyltransferase Mvan_5337.
What is the protein family that this protein belongs to?
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
Protein: ARLY_DESVH
Sequence: MAEKKMWGGRFKQGTATLVEEYTESVSYDRALYAQDIAGSMAHARMLARQGVLTAEEAAIIVDGLATVRSEIEAGSFVWRREFEDVHMNIENRLTELVGDVGKKLHTGRSRNDQVALDFRLFVSDRVRVWRELGRDLVGVIVDQARQHTATLLPGCTHMQPAQPVSLAQHLLAYAWMLRRDIDRLEDCDKRARVCPLGAAALAGTTYPLDPASVADELGMYGTFRNSMDAVSDRDFVLEALFDGSVIMAHLSRLCEEFILWANPAFGYIFLPDAYATGSSIMPQKKNPDVAELMRGKTGRVYGALTTMLTTVKGLPMTYNRDLQEDKEPFIDADRTVSASLEIMAGMLREVRFNTARMRTALRSGFLNATELADYLVGKGIPFREAHHLTGAAVALAEEKGVTLEELPLEDYRGICDRIDEDVYPILEPEAAVSRRETPGGTGPRSVAAQIAELDSWLGR
What are the official names of this protein?
Argininosuccinate lyase, ASAL, Arginosuccinase.
What is the protein family that this protein belongs to?
Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CD209_PAPHA
Sequence: MSDSKEPRLQQLGLLEEEQLRGVGFRQTRGYKSLAGCLGHGPLVLQLLSFTLLAGLLVQVSKVPSSLSQGQSKQDAIYQNLTQLKAAVSELSEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKQQEIYQELTQLKAAVDGLPDRSKQQEIYQELTQLKAAVDGLPDRSKQQEIYQELIQLKAAVERLCRPCPWEWTFFQGNCYFMSNSQRNWHNSITACQEVGAQLVVIKSAEEQNFLQLQSSRSNRFTWMGLSDLNHEGTWQWVDGSPLLPSFKQYWNKGEPNNIGEEDCAEFSGNGWNDDKCNLAKFWICKKSAASCSGDEERLLSPAPTTPNPPPE
What is the function of this protein?
On DCs it is a high affinity receptor for ICAM2 and ICAM3 by binding to mannose-like carbohydrates.  May act as a DC rolling receptor that mediates transendothelial migration of DC presursors from blood to tissues by binding endothelial ICAM2.  Seems to regulate DC-induced T-cell proliferation by binding to ICAM3 on T-cells in the immunological synapse formed between DC and T-cells (By similarity).
What are the official names of this protein?
CD209 antigen, Dendritic cell-specific ICAM-3-grabbing non-integrin 1, DC-SIGN1.
What are the subcellular locations of this protein?
Membrane; Single-pass type II membrane protein.
Protein: DACA_HAEIN
Sequence: MLKRTTKIAFLSSFVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKNFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALMDHFITIPKGKQSEVKARYELADKNLQAPLVKGQVIGKVVYQLDGKDIASANLQVMNDVGEAGIFGKLWDWLVLTVKGLFS
What is the function of this protein?
Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.
What are the official names of this protein?
D-alanyl-D-alanine carboxypeptidase DacA, DD-carboxypeptidase, DD-peptidase, Penicillin-binding protein 5, PBP-5.
What is the protein family that this protein belongs to?
Belongs to the peptidase S11 family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein. Note=N-terminal lies in the periplasmic space.
Protein: PSK4_ARATH
Sequence: MANLSTLITIALLLCATMLTCSARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDCLVRRTLTAHLDYIYTHKNNHH
What is the function of this protein?
Promotes plant cell differentiation, organogenesis and somatic embryogenesis as well as cell proliferation.
What are the official names of this protein?
Putative phytosulfokines 4, AtPSK4.
What is the protein family that this protein belongs to?
Belongs to the phytosulfokine family.
What are the subcellular locations of this protein?
Secreted.
Protein: FLHD_ECODH
Sequence: MGIMHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA
What is the function of this protein?
Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region.  Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes.  Also regulates genes whose products function in a variety of physiological pathways.
What are the official names of this protein?
Flagellar transcriptional regulator FlhD.
What is the protein family that this protein belongs to?
Belongs to the FlhD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KAD_MYCSS
Sequence: MRIVLLGPPGAGKGTQAAKLADKLGVPHISTGDLFRDNITNETELGVEAKRYLDAGDLVPSSLTNALVEDRIDQDDAKNGFILDGYPRSVEQAEALGDMLAARNLSLDAVIEFRVSEDELLSRLKGRGRADDTEEVILNRMKVYRDETAPLLDHYRAELKTVDAVGSLDEVFARALQALGR
What is the function of this protein?
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP.  Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.
What are the official names of this protein?
Adenylate kinase, AK, ATP-AMP transphosphorylase, ATP:AMP phosphotransferase, Adenylate monophosphate kinase.
What is the protein family that this protein belongs to?
Belongs to the adenylate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DNAA_MYCMY
Sequence: ESGMGKTHLLKAAKNYIESNFFDLKVSYMSGDEFARKAVDILQKTHKEIEQFKNEVCQNDVLIIDDVQFLSYKEKTNEIFFTIFNNFIENDKQLFFSSDKSPELLNGFDNRLITRFNMGLSIAIQKLDNKTATAIIKKEIKNQNIKSEVTSEAINFISNYYSDDVRKIKGSVSRLNFWSQQNPEEKIITIEIISDLFRDIPTSKLGILNVKKIKEVVSEKYGISVNAIDGKARSKSIVTARHIAMFLTKEILNHTLAQIGEEF
What is the function of this protein?
Plays an important role in the initiation and regulation of chromosomal replication.  Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'.  DnaA binds to ATP and to acidic phospholipids (By similarity).
What are the official names of this protein?
Chromosomal replication initiator protein DnaA.
What is the protein family that this protein belongs to?
Belongs to the DnaA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ECFA2_STRP2
Sequence: MGIALENVNFIYQEGTPLASAALSDVSLTIEDGSYTALIGHTGSGKSTILQLLNGLLVPSQGSVRVFDTLITSTSKNKDIRQIRKQVGLVFQFAENQIFEETVLKDVAFGPQNFGVSEEDAVKTAREKLALVGIDESLFDRSPFELSGGQMRRVAIAGILAMEPSILVLDEPTAGLDPLGRKELMTLFKKLHQSGMTIVLVTHLMDDVAEYANQVYVMEKGRLVKGGKPSDVFQDVVFMEEVQLGVPKITAFCKRLADRGVSFKRLPIKIEEFKESLNG
What is the function of this protein?
ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex.  Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
What are the official names of this protein?
Energy-coupling factor transporter ATP-binding protein EcfA2, ECF transporter A component EcfA2.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Energy-coupling factor EcfA family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: RL21_CLAM3
Sequence: MVYAVVRAGGRQEKVEVGTIVTMDRVKNQQSGKVVLPAVLLVDGDTITTDAAKLADVTVSAEILNDLRGPKIVIQKFKNKTGYKKRQGHRQDLTRVQVTEIN
What is the function of this protein?
This protein binds to 23S rRNA in the presence of protein L20.
What are the official names of this protein?
50S ribosomal protein L21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL21 family.
Protein: PBMU2_HUMAN
Sequence: MPRYVPLLLLLLLLRCSERGGGVNFGEKDAKVPGTWRDGVRVPGEGASWDSDRASPERRYGIVGLSQSISTKHPETSPKDSRIRENDVTADGRTTEDHITADPGTTEDSVTADPGTTEDNVTVDPGTTEGSVTADPATTKDYVSADPGTTKDSVTADPGTTENFVTADPGTTKDSITADPRTTEDSVTADPGTTKHSITVDPGTTEDSVTADPGTTKHSITADPGTTEDSVTADPGTTEDETTKHGDTHLL
What are the official names of this protein?
Protein PBMUCL2, HLA complex group 22, Panbronchiolitis-related mucin-like protein 2.
What are the subcellular locations of this protein?
Secreted.