PharMolix/UniProtQA huggingface dataset:
Protein: ATPG_BRUMB
Sequence: MPSLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNVSGEDAPALMVGTGKDDVHLLVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVSTAQQLIPASADNEAEMETAGDAIYEYEPDPAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
What are the official names of this protein?
ATP synthase gamma chain, ATP synthase F1 sector gamma subunit, F-ATPase gamma subunit.
What is the protein family that this protein belongs to?
Belongs to the ATPase gamma chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: RL5_PROVU
Sequence: MAKLHDYYKDEVVQKLMSQFGYHSVMQVPRVEKITLNMGVGEA
What is the function of this protein?
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.  In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement.  Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (By similarity).
What are the official names of this protein?
50S ribosomal protein L5.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL5 family.
Protein: DAPEL_BACMK
Sequence: MTVSKFVQVRRDLHKIPEIGFKEWKTQQYILDYIGTLPNEYLEVKTWKTGVIVKVNGKNPEKIIGYRADIDGLPITEETGYEYSSVHEGMMHACGHDLHATIGLGLLTAAVSERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIEAIVAGIEASFQCEAVIDYGAMYHQVYNHEELTREFMQFTREQTTMDVITCTEAMTGEDFGYMLREIPGFMFWLGVNSEYGLHHAKLKPDEEVIEKAIVFLNQYVKWKGNRK
What is the function of this protein?
Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
What are the official names of this protein?
N-acetyldiaminopimelate deacetylase.
What is the protein family that this protein belongs to?
Belongs to the peptidase M20A family. N-acetyldiaminopimelate deacetylase subfamily.
Protein: ISPH2_BURMA
Sequence: MSSTDTLSGQVAAADAEILLAQPRGFCAGVDRAIEIVERAIAMHGAPIYVRHEIVHNKYVVEDLKKKGAIFVEELEEVPSGNTVIFSAHGVSKAVRDEAAVRGLRIYDATCPLVTKVHVEVAKMRQEGVDIVMIGHKGHPEVEGTMGQVERGMHLVESVEDVRRLELPDPERVALVTQTTLSVDDAAEIIGALKAKFPAIREPKKQDICYATQNRQDAVKFMAPQCDVVIVVGSPNSSNSSRLREVAEKRGVAAYMVDAPEQIDPAWVAGKRRIGVTAGASAPEVLAQAVIARLRELGVTNVRALEGIEENVSFPLPRGLNLSSAA
What is the function of this protein?
Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP).  Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.
What are the official names of this protein?
4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2, HMBPP reductase 2.
What is the protein family that this protein belongs to?
Belongs to the IspH family.
Protein: MURA_SHIDS
Sequence: MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCSATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGVNIERVKGE
What is the function of this protein?
Cell wall formation.  Adds enolpyruvyl to UDP-N-acetylglucosamine.
What are the official names of this protein?
UDP-N-acetylglucosamine 1-carboxyvinyltransferase, Enoylpyruvate transferase, UDP-N-acetylglucosamine enolpyruvyl transferase, EPT.
What is the protein family that this protein belongs to?
Belongs to the EPSP synthase family. MurA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ADE_HAHCH
Sequence: MQDFLKGLPKAELHLHIEGSLEPELMFEIGRRNGVALPFANVEEVRAAYEFNNLQEFLDIYYQGAQVLLHEQDFYDMTFAYLQRCREQNVIHAEMFFDPQTHTDRGVDIGVVIRGLTRAMEDAEIQWGQSSKLILCFLRHLSEDAAIETLRQALPYKQHFVGVGLDSSEVGHPPEKFQRVFEQAQNAGLLTVAHAGEEGPPEYIWQALDLLKVKRIDHGVRCIEDAALMQRLIDEQIPLTVCPLSNIKLCVFDSMSEHNILRLLEKGLKVTVNSDDPAYFGGYMNENFIAMQEALPMSKEQAAQLARNSFEASFLTSEEKARLLARLDQYLQNH
What is the function of this protein?
Catalyzes the hydrolytic deamination of adenine to hypoxanthine.  Plays an important role in the purine salvage pathway and in nitrogen catabolism.
What are the official names of this protein?
Adenine deaminase, ADE, Adenine aminohydrolase, AAH.
What is the protein family that this protein belongs to?
Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenine deaminase type 2 subfamily.
Protein: RL18_STRGG
Sequence: MAYGVKIAKGDAYKRAARKRRHIRVRKHLSGSPERPRLVVTRSNRHIVAQVIDDIAGHTLASASTLDTSIRGGEGDKSAQAQQVGALVAERAKAAGVEAVVFDRGGNQYAGRIAALADAAREAGLKF
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: C1QB_BOVIN
Sequence: MKTPRGSVLVLLLLNLLRVSWAQSNCIRPSIPGIPGIPGKPGSDGKPGTPGTKGEKGLPGLVSHLNENGEKGDPGFPGMPGKVGPKGPIGPKGVPGPPGVRGPKGESGDYKATQKIAFSASRTINHHQRQGQPIRFDHVITNANENYQARSSKFTCKVPGLYFFTYHASSRGQLCVDLMRGRAEPQKVVTFCDYVQNTFQVTTGSIVLKLEKDETVFLQATEKNALVGIEGANSIFSGFMLFPDTEA
What is the function of this protein?
C1q associates with the proenzymes C1r and C1s to yield C1, the first component of the serum complement system.  The collagen-like regions of C1q interact with the Ca(2+)-dependent C1r(2)C1s(2) proenzyme complex, and efficient activation of C1 takes place on interaction of the globular heads of C1q with the Fc regions of IgG or IgM antibody present in immune complexes (By similarity).
What are the official names of this protein?
Complement C1q subcomponent subunit B.
What are the subcellular locations of this protein?
Secreted.
Protein: RL25_SYNAS
Sequence: MEARELKANVRKESGKEQARRMRREGLIPAVLYGPGTDPVSLSVNASDLKTALKGAEENVLIKLIIDDSGRLMEKNSLIRELQIEPLTNNFFHADFYALRMDQESTFDVPIHFEGQPVGIEKGGELQYLKREIKVSCLPSELPDCITVDISRLDVGDAVLIGDLSLSESIRCFDSKDIVLVTIAALHGVNKAEETEEASS
What is the function of this protein?
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L25, General stress protein CTC.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
Protein: GCSP_BORBR
Sequence: MSRAPDTHSDFIPRHIGPSDEDQATMLAAIGAASLDALIDEVVPPRIRSRAPLALPAARSETDVLQDLKRMAARNQIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQHCHPQTLEVVRTRAEGLGIELVIGDESRGLPECFGVLLQYPHSLGGVADYRELAQAAHAQGAVVACVTDLLALALIEPPGQWGADIAVGSAQRFGVPFGFGGPHAGFMSCRDAYKRNMPGRLVGVSKDAQGNPALRLALQTREQHIRREKATSNICTAQVLLAVMAGLYAVWHGPRGVRRIAERVQSLTGALRAALAGLGVKVANDTWFDTLLLETGVATPAILAAADCARINLRQVDGARLAVSLDETVTLADLQALVNVFAAGLGKDEVALPAPQASLDGIPAAVRRQGPILSHPVFSSVQSETDMLRYLRKLADKDLALDRTMIPLGSCTMKLNATAEMIPITWPEFALIHPFAPASQTPGYRELIDGLSAQLCEITGYDGISLQPNSGAQGEYAGLLAIRAYHQANGQPQRNVCLIPASAHGTNPASAQLAGMDVVVVASDANGNVDLADLRARIAQVGERLAALMITYPSTHGVFEEAVTEICDAVHEAGGQVYLDGANMNAMVGVAQPGKFGSDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAPYLPGVLDAQGRLDPEAKVGPVSAAPYGSAGILPIPYVYIALMGAEGLRRATEVAILNANYIAARLRDHYPVLYAGRNGRVAHECILDVRPLKETSGISAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIEAMIAIRAEIAQIESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLPVEAYA
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.  The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
What are the official names of this protein?
Glycine dehydrogenase (decarboxylating), Glycine cleavage system P-protein, Glycine decarboxylase, Glycine dehydrogenase (aminomethyl-transferring).
What is the protein family that this protein belongs to?
Belongs to the GcvP family.
Protein: RLME_MARMM
Sequence: MSDDDQKPEDATPDGSEPAENQPDGETPAAGEGAPDQAGLPGWGSSDKRRGRRSGPMKKGGDARAAKQMFERVKTARGRKSSSTRWLQRQLNDPYVKKAQMEGYRSRAAYKLLQLDERFKLLKPGMRVVDLGSAPGGWVQVALKSGASEVVGIDLLEMEAIAGATLLEKDFTDADAPSLVKAEMGGAADAVVSDLAPWTTGHKTTDHLRIVALAELAAHFAVETLKPGGFFIAKVFQGGSDSDLLNFLKANFEKVRHFKPDASRSESAETFVVAMGFKG
What is the function of this protein?
Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
What are the official names of this protein?
Ribosomal RNA large subunit methyltransferase E, 23S rRNA Um2552 methyltransferase, rRNA (uridine-2'-O-)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL15E_DESA1
Sequence: MSKSMYHYIAEAWKEKSRELEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDSGRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLRGTVYYKWKRKLKERELKKRHEASRGARDPWQIAEKLKEEK
What are the official names of this protein?
50S ribosomal protein L15e.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic ribosomal protein eL15 family.
Protein: HTRSN_PHYTS
Sequence: NLVSDIIGSKKHMEKLISIIKKCR
What is the function of this protein?
Antimicrobial peptide (Ref. 1, PubMed:28102305).  Active against Gram-negative bacteria E. coli ATCC 25922 (MIC=1. 5 uM) and P. aeruginosa ATTC 27853 (MIC=23. 2 uM) and against Gram-positive bacterium S. aureus ATCC 29313 (MIC=11. 6 uM) (Ref. 1, PubMed:28102305).  Has no hemolytic activity (Ref. 1).  Associates with and disrupts membranes in vitro (PubMed:28102305).
What are the official names of this protein?
Homotarsinin.
What are the subcellular locations of this protein?
Secreted.
Protein: DEF_SALG2
Sequence: MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGNPFELEADGLLAICIQHEMDHLVGKLFIDYLSPLKQQRIRQKVEKLDRLNARA
What is the function of this protein?
Removes the formyl group from the N-terminal Met of newly synthesized proteins.  Requires at least a dipeptide for an efficient rate of reaction.  N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
What are the official names of this protein?
Peptide deformylase, PDF, Polypeptide deformylase.
What is the protein family that this protein belongs to?
Belongs to the polypeptide deformylase family.
Protein: PRMA_PARP8
Sequence: MSYRELVVELAREHAEALSDALLELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWTHSRVIALLAPEHEPAVLLAAAANELGLADTPSFSVRAVEEQDWVRLTQSQFDPIPIGERIWVVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLEQSVQKDQSVLDYGCGSGILAILAKKCGANPVFGIDIDPQAVESARHNSERNRAEITYGLPADCPAGEFDIVVANILSNPLKLMASMLSSKVKPGGRIALSGILARQAEEVASVYRQWIDIAVWREHEGWVCLAGTRRESN
What is the function of this protein?
Methylates ribosomal protein L11.
What are the official names of this protein?
Ribosomal protein L11 methyltransferase, L11 Mtase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. PrmA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EMRD_ECOLI
Sequence: MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQPV
What is the function of this protein?
Multidrug resistance pump that participates in a low energy shock adaptive response.
What are the official names of this protein?
Multidrug resistance protein D.
What is the protein family that this protein belongs to?
Belongs to the major facilitator superfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: UREG_VARPS
Sequence: MTSALHHIPHRTKKLPPLRVGIGGPVGSGKTTLLEMLCKAMRDKYDLVAITNDIYTKEDQRLLTVAGALPAERIMGVETGGCPHTAIREDASINLEAIDRMLEDFPDADVVFVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLFVINKTDLAPYVGANLDVMEQDTQRMRRQRPYVMTNLKTHTGVAEVVAFIEKRGMLTAD
What is the function of this protein?
Facilitates the functional incorporation of the urease nickel metallocenter.  This process requires GTP hydrolysis, probably effectuated by UreG.
What are the official names of this protein?
Urease accessory protein UreG.
What is the protein family that this protein belongs to?
Belongs to the SIMIBI class G3E GTPase family. UreG subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y2642_KLEP7
Sequence: MSTPEKRPVSFFSLFNRGQHYAKTWPLDKRLAPVFIENRIIRATRYAIRIMPPIAIFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPSILNWFYEVRGKLQEAGQALAPVEGKPDYQALADTLKRAFKQLDKTFLDDL
What are the official names of this protein?
UPF0208 membrane protein KPN78578_26420.
What is the protein family that this protein belongs to?
Belongs to the UPF0208 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: GATA_DESAL
Sequence: MALHELTIGQAREKLLSKEISSQDLTKAVLDRIEAVEPQVDAYLTVSKEEAMEAAQKADKALAQGETAPLCGIPLAIKDVMCTKGVLTTCASKILGNFVPPYDATSITKLKEAGAVLVGKTNMDEFAMGSSTENSAFKTTKNPWDLTRTPGGSSGGSAAAVAADMCLGAFGSDTGGSIRQPGSHCSVVGLKPTYGRVSRYGLVAFASSLDQIGPFAKTVEDAAILLQAVAGYDPSDSTSVNVEVPDYTTAIQEDVKGMRVGMPKEYFEMGGLTPDVKNSVDQAIKTLESQGVEVMDVSLPHSKYCVAVYYVIAPAEASSNLARYDGVKYGMREERDSLIDMYHATRSSGFGPEVQRRIIIGTYALSAGYYDAYYGKASQVRTLIMEDYKKAFEKCDAIISPVAPTPAFKLGENTDDPLTMYLSDIFTLSANLAGVCGVSVPCGFSSEGLPIGLQLQGSHFQEEKILRLGHHFQKATDFHTKRPNL
What is the function of this protein?
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase.  The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Glutamyl-tRNA(Gln) amidotransferase subunit A, Glu-ADT subunit A.
What is the protein family that this protein belongs to?
Belongs to the amidase family. GatA subfamily.
Protein: TRMYL_VIBA3
Sequence: MRSFVLRARAAPTESKLILEGVGQDAHTEILAHTLMNTIFVAQSHRENVTVHLVLESTKDFSRTITFDSNEITNIGGFHESALLSAVVRAVDASQGMIKEQTRQVEPGITVRTMSFEKLVKELAEDHQLYMMDKKGDFIRDAEIAENPCFLLTDHIPMPKKSYNSLKRLGTEKISLGPNMLFASQCVVLINNELDVRGF
What are the official names of this protein?
Putative pseudouridine methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. TrmY family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CH60_BORT9
Sequence: MAKDIYFNEDARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELDNALENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIEHAVTLASEKIRKSAKKITTKEEIAQVASISANNDTSIGEKIAEAMDRVGKDGVITVEESKTFDTTISYVEGMQFDRGYLSPYFSTNKENMSVSFDDAYILICEKKISTIKELLPVLEKVLNTNKPLLIIAEDIEGDALAALVLNSVRGALKVCAIKAPGFGDRRKAMLEDIAILTGGVFVSEELGLTLENVELEQLGQAKSVKVDKDNTTIINTGNKEQIKERAELIKKQIEETSSEYDKEKLQERLAKLVGGVAVINVGAVTELELKEKKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTVDTSKLSYEEKQGFEIVKRSLEEPMRQIIANAGFESSIYIHQIKTDKKGLGFDAASFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTECAITEVKEEKSNAGGGYPMDPGMGMM
What is the function of this protein?
Together with its co-chaperonin GroES, plays an essential role in assisting protein folding.  The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.
What are the official names of this protein?
Chaperonin GroEL, 60 kDa chaperonin, Chaperonin-60, Cpn60.
What is the protein family that this protein belongs to?
Belongs to the chaperonin (HSP60) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MOAA_PSYIN
Sequence: MSLPPVFGKELNMSQQLIDNFDRKFEYLRLSITDVCNFKCNYCLPDGYQRTHEKQFLSKQEITNLVNAFAELGAKKVRITGGEPALRKDFPKIIEAIATIPGIQKVATTTNGYNLSSHAQAWFDAGLDSINVSVDSLDAKTFHLITGKNIFQKVMQGVNASVKAGFKQVKINSVLMKGLNDIDIDLYINWIKDQPIQLRFIELMQTEDNGEFFNKHHLSGEWIKQNLLENGWTQKQSLSHDGPAQIFYHPDYLGEIGLIMPYSKDFCKSCNRLRVSSVGRLHLCLFGEEGVDLRDLLGTSADKEKLKQRIVESLKSKKVSHYLADGESGGTPHLASIGG
What is the function of this protein?
Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
What are the official names of this protein?
GTP 3',8-cyclase, Molybdenum cofactor biosynthesis protein A.
What is the protein family that this protein belongs to?
Belongs to the radical SAM superfamily. MoaA family.
Protein: PRPC2_CORGL
Sequence: MSSATTTDVRKGLYGVIADYTAVSKVMPETNSLTYRGYAVEDLVENCSFEEVFYLLWHGELPTAQQLAEFNERGRSYRSLDAGLISLIHSLPKEAHPMDVMRTAVSYMGTKDSEYFTTDSEHIRKVGHTLLAQLPMVLAMDIRRRKGLDIIAPDSSKSVAENLLSMVFGTGPESPASNPADVRDFEKSLILYAEHSFNASTFTARVITSTKSDVYSAITGAIGALKGPLHGGANEFVMHTMLAIDDPNKAAAWINNALDNKNVVMGFGHRVYKRGDSRVPSMEKSFRELAARHDGEKWVAMYENMRDAMDARTGIKPNLDFPAGPAYHLLGFPVDFFTPLFVIARVAGWTAHIVEQYENNSLIRPLSEYNGEEQREVAPIEKR
What is the function of this protein?
Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and via the 2-methylcitrate cycle I (propionate degradation route).  Catalyzes the Claisen condensation of propionyl-CoA and oxaloacetate (OAA) to yield 2-methylcitrate (2-MC) and CoA.  Also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity.
What are the official names of this protein?
2-methylcitrate synthase 2, 2-MCS, MCS, Citrate synthase 2, CS.
What is the protein family that this protein belongs to?
Belongs to the citrate synthase family.
Protein: RS7_BRUSI
Sequence: MSRRHKAEKREINPDPKFGDLVITKFMNAVMLHGKKSVAESIVYGALDAIEAKAKSEPVALFHQALDNVAPHIEVRSRRVGGATYQVPVDVRPERRQALAIRWLINAARGRNETTMVDRLSGELLDAANNRGSAVKKREDTHRMAEANRAFSHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: RIMM_STAAC
Sequence: MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNNDLEYTVKSHRVHKGLHMLTFEGINNINDIEHLKGSSIYQERDHEDIVLEENEFYYSDIIGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDVENKKIIITPMEGLLD
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: ARCA_PEDPA
Sequence: MANAIHVTSEIGKLKTVMLHRPGKEIENITPDSMERLLFDDIPYLPIAQKEHDFFAKTLTDQGIEVIYFEKLAADALSDDGVRKEFLNRMIAESGYAVGVIHDALMEYLYAMDPQMMINQIIEGVRASDVNIVTPDLQSVSENTDWPFLMDPMPNAYFTRDPQASIGDGLSINKMTFEARMRESLITEYIMNYNPRFAGKVKVWRDRNHRTHIEGGDELVLNDHVLAIGISQRTTANAIEDIARNLFKDSNYDTIIAISIPHNHAMMHLDTVFTMINYEQFTVHPAILTGDGKVDNWVLHPGKDGEITMEHHTDIKEVLKKALNKSEIDLIPTGNGDPIVAPREQWNDGSNTLSIAPGVVVTYDRNYVSNDLLRQHGILVHEVRSSELSRGRGGPRCMSCPIVREDI
What are the official names of this protein?
Arginine deiminase, ADI, Arginine dihydrolase, AD.
What is the protein family that this protein belongs to?
Belongs to the arginine deiminase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y656_TREPA
Sequence: MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN
What are the official names of this protein?
Uncharacterized protein TP_0656.
Protein: RL31B_ACIBY
Sequence: MRKDIHPAYQQVLFHDTNADVYFLIGSTIQTKQTKEYQGQVYPYVTLDISSASHPFYTGEVRQASNEGRVASFNKRFARFNRKS
What are the official names of this protein?
50S ribosomal protein L31 type B.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL31 family. Type B subfamily.
Protein: GPMA_ENDTX
Sequence: MYKVVLIRHGESVWNKENKFTGWSDVDLSEKGNEEALKAGKQLKKDGFTFDLAYTSVLKRAIKTLWNVLNTMDLLWTPVVKDWRLNERHYGALQGLNKAETAAKYGEEQVKIWRRSYDIAPMALDENDERYPGKEARYSGLLKGEIPLAECLKDTVARVVPYWGKEVVPQIKAGKKIIIAAHGNSLRALVKYLDNISDSNIVNLNIPTAMPLVYELDENLKAVKNYYLGDPEAVKKAMETVASQGKVKK
What is the function of this protein?
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
What are the official names of this protein?
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, BPG-dependent PGAM, PGAM, Phosphoglyceromutase, dPGM.
What is the protein family that this protein belongs to?
Belongs to the phosphoglycerate mutase family. BPG-dependent PGAM subfamily.
Protein: RL23_BUCAP
Sequence: MISQERFLKVLLSPHISEKSSISMEKFNTVVLKVSRNTTKNEIKFAVQNLFNIQVESVKTVYVKGKKKRQSNRIIYRSDWKKAYIKVKKGQNLDFMSNIE
What is the function of this protein?
One of the early assembly proteins it binds 23S rRNA.  One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.  Forms the main docking site for trigger factor binding to the ribosome.
What are the official names of this protein?
50S ribosomal protein L23.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL23 family.
Protein: RPOZ_ECO81
Sequence: MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR
What is the function of this protein?
Promotes RNA polymerase assembly.  Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
What are the official names of this protein?
DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase subunit omega family.
Protein: PSA2_ARATH
Sequence: MAASSSHLFALPSPASPFLSAPNRNRVRVLAKSCPENQSFDSNDSDSSSETTHKAQGDQKSVSRRQWMTACVCASAALISNSYTFVSVQSAAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPGARELLEKMYNGRLLPDS
What is the function of this protein?
Involved in female gametophyte development.  Required for embryo sac development (PubMed:15634699).  Nuclear genome-encoded factor required for the accumulation of photosystem I (PSI) during plant development (PubMed:25228689).  Required for light acclimation and chloroplast development (PubMed:27047527).
What are the official names of this protein?
Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic, AtPSA2, Protein EMBRYO SAC DEVELOPMENT ARREST 3.
What is the protein family that this protein belongs to?
Belongs to the DnaJ family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid lumen.