PharMolix/UniProtQA huggingface dataset:
Protein: PME1_SOLLC
Sequence: MANPQQPLLIKTHKQNPIISFKILSFVITLFVALFLVAPYQVEIKHSNLCKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELDSFTKAMINGTNLEELISRAKVALAMLASLTTQDEDVFMTVLGKMPSWVSSMDRKLMESSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGLYD
What is the function of this protein?
Pectinesterase may play a role in cell wall metabolism during fruit growth and development prior to ripening and may be required for preparing cell walls for softening by polygalacturonase during fruit ripening.
What are the official names of this protein?
Pectinesterase 1, PE 1, Pectin methylesterase 1.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the pectinesterase family.
What are the subcellular locations of this protein?
Secreted, cell wall.
Protein: RS13_METPB
Sequence: MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETIDRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGKKK
What is the function of this protein?
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA.  In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement.  Contacts the tRNAs in the A and P-sites.
What are the official names of this protein?
30S ribosomal protein S13.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS13 family.
Protein: SSAA1_STAAN
Sequence: MKKIVTATIATAGLATIAFAGHDAQAAEQNNNGYNSNDAQSYSYTYTIDAQGNYHYTWTGNWNPSQLTQNNTYYYNNYNTYSYNNASYNNYYNHSYQYNNYTNNSQTATNNYYTGGSGASYSTTSNNVHVTTTAAPSSNGRSISNGYASGSNLYTSGQCTYYVFDRVGGKIGSTWGNASNWANAAASSGYTVNNTPKVGAIMQTTQGYYGHVAYVEGVNSNGSVRVSEMNYGHGAGVVTSRTISANQAGSYNFIH
What is the function of this protein?
Not known; immunogenic protein.
What are the official names of this protein?
Staphylococcal secretory antigen ssaA1.
What are the subcellular locations of this protein?
Secreted.
Protein: LPXC_FRATW
Sequence: MMKQKTIAKEFSVTGVGLHSGVDVSMTVKPADIDSGIVFRRADLTPVVDIKVTPSSIKEAIMCTLLTKDGDQNLSVSTIEHLMSAFAMFEVDNVLIEVNAPELPVMDGSSYEFTQLLKQVGIVEQNSARKGIKILKPVRVEHEDKFAEVLPSDTLKYEFKIHWDHPVIAATNDHIVFEYDLDEYIKMVSKARTFGFYEQLAYLHQNNLAKGASLDNAVGVTNEGVLNEGGLRYDDEFVRHKLLDAIGDFYVGGYILGHFNCFKSGHTLNNKLLHAVFADKDAWEYI
What is the function of this protein?
Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.
What are the official names of this protein?
UDP-3-O-acyl-N-acetylglucosamine deacetylase, UDP-3-O-acyl-GlcNAc deacetylase, UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase.
What is the protein family that this protein belongs to?
Belongs to the LpxC family.
Protein: VP7_ROTB6
Sequence: MYGIEYTTFLIYLISIILFNYILKSITRMMDYIIYKFLLIVTIASIVVNAQNYGINLPITGSMDASYVNATKDKPFLTSTLCLYYPTEARTEINDNEWTSTLSQLFLTKGWPTGSVYFKEYDDIATFSVDPQLYCDYNIVLMRYNSSLELDMSELANLILNEWLCNPMDITLYYYQQNGQANKWIAMGQSCTIKVCPLNTQTLGIGCQTTNTRTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGPRENVAVIQVGGADILDITSDPTTAPQTERMMRINWKKWWQVFYTIVDYVNQIVQAMSKRSRSLNSAAFYYRV
What is the function of this protein?
Calcium-binding protein that interacts with rotavirus cell receptors once the initial attachment by VP4 has been achieved.  Rotavirus attachment and entry into the host cell probably involves multiple sequential contacts between the outer capsid proteins VP4 and VP7, and the cell receptors.  Following entry into the host cell, low intracellular or intravesicular Ca(2+) concentration probably causes the calcium-stabilized VP7 trimers to dissociate from the virion.  This step is probably necessary for the membrane-disrupting entry step and the release of VP4, which is locked onto the virion by VP7.
What are the official names of this protein?
Outer capsid glycoprotein VP7.
What is the protein family that this protein belongs to?
Belongs to the rotavirus VP7 family.
What are the subcellular locations of this protein?
Virion. Host endoplasmic reticulum lumen. Note=The outer layer contains 780 copies of VP7, grouped as 260 trimers. Immature double-layered particles assembled in the cytoplasm bud across the membrane of the endoplasmic reticulum, acquiring during this process a transient lipid membrane that is modified with the ER resident viral glycoproteins NSP4 and VP7; these enveloped particles also contain VP4. As the particles move towards the interior of the ER cisternae, the transient lipid membrane and the non-structural protein NSP4 are lost, while the virus surface proteins VP4 and VP7 rearrange to form the outermost virus protein layer, yielding mature infectious triple-layered particles.
Protein: SSPK_BACAC
Sequence: MGKQAEFWSESKNNSKIDGQPKAKSRFASKRPNGTINTHPQERMRAANQQEE
What are the official names of this protein?
Small, acid-soluble spore protein K, SASP K.
What is the protein family that this protein belongs to?
Belongs to the SspK family.
What are the subcellular locations of this protein?
Spore core.
Protein: MUTL_PETMO
Sequence: MRIKVLNPEVVMKIAAGEVVSGPSSVVKELVENSLDAQADSITVEILDGGKSLIKVDDNGIGMEEEELELSILPHTTSKIFSIEDLYKLKTFGFRGEALSSISRVSRMKMTSKPPEKEVGTMLEILGGKIIEKKRVNSSNGTKIEIMDLFFNIPARRKFLKSDSAEGRYVTEIIEKFAFTNNINLTYIRDHKEIYKFSSDMDLITKCLKIYPELKRDDLIEIEHNDSLCKISGVISQPKVGRNNRTAQHFFVNNRYIKVASLYSVLETGYGEILEKSIHPYGIIFIEIPPDMVDVNVHPQKLEVKFTDEQMVASLLKKVVRESLKKNTHFTMEFINSNDTIDLNKKTSSFSVQNLYNKNESSQKVDFSQNPTNTDYFENTDEFFNNSEIEDLQEEQNHFDNSYKLYEPSKTFDFKGFEYQKNQTFTPVEKINSLEKLRILGIVAERYLVVEGEDKLLLVDFHAAHERYIYEILRENVYEKGGLTSDLLLTPVIIALDEVRKGIILENKDHLEKLGIKLEEDEKEIIVKGLPSLVKIDDAERLIFEIADDLRISNFDQQPNILDKNLATMACRAAVKTRDNPTGMETLLNTIFEKKLLTCPHGRPIMIQITFKTLDKYFGRI
What is the function of this protein?
This protein is involved in the repair of mismatches in DNA.  It is required for dam-dependent methyl-directed DNA mismatch repair.  May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
What are the official names of this protein?
DNA mismatch repair protein MutL.
What is the protein family that this protein belongs to?
Belongs to the DNA mismatch repair MutL/HexB family.
Protein: SYD1_CAEBR
Sequence: MLPLQGFNMTYPRKGVMPYPSTFLYREEPSVSTTECCCCWLCRLLCCCSTVDSQTALRDRMNASQPPPGGGGRLPDEVYRKIKAVDQGQSTLTQSGIQGLSARTLDENQRGDLVFQLVEIIKKPGQSLGLYLREGNGKDRSDGVFVSRFGDNSELAKSFLMSIDDVVLILSIPRRLLLRIRFSKSMRHEVITSRSSERPVVVFHKYDDRRDSETNAPILSQPTSTANTWLGKKSRQQMEEMRNATTTSTMRAAHASTSSPRNHFAPRLVNGHSQPIGVPSASSASTSDHHYQRFASEPSDSVSRTARVPPPRLASATVRRTESFNSAPGVSSSAPMYTLPRSSTAVPPPDIIGSIPHSARDPLMRSDLPYDPLTGRLSSSVPTDPLLSRSLCSPILPRTLRQPNDSNKSNSLPRRRIMTGGRNVKWRNDVVSTSDLCGEESDGAISAPEYSSPPFSRLTQQQQFRLSNGSPGRTVNDIFSAAEYRNWAGPYDPRGMYGPYPPGQRTTRWSHTYGEQRAPRTSSLPGRTVLAQSLVGSPVLPRHPPPIVQDRPSAVFDRYHVSPLMNRRAPLRAAGPGINVDRLSVSSLTGILYVHILEGRGLKIPEKQKGLTEEMYCVLEVDEQHRARTGVSTIEQKFKWRETFHIDVVNATVSNFFVYSWHPQFRHKLCHKGSLKLLEAFVVDQLNDDRVFALNLEPRGQLIVRIGFHDLQAVFRRTVNPRLNGVFGVPLGRLVQRERRDTPIVLTRLIQEIEKRGVDLSGLYVLCGSVEKKKMLRAQLESNPLGTDLNAENIPDTNVIACLIKDFLRELPEPLISPQIHGMLLEAATVALPNDVQANRTLVLKIIDCLQLSAKNCLLLVLDHLSTILCSSPHNGLTPTRLSLIFAPLLFFCLDAISPYTTSPTSKMAAVRSLDMNQASSSLQMILSIWPSRVNSESGSDSPATSGQKGGGGVSYVSESQC
What is the function of this protein?
Probable GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.  Regulates the localization and assembly of presynaptic components during presynaptic development and is required for specifying the identity of axons during initial polarity acquisition.  In these roles it is thought to act cell autonomously downstream of syg-1 and syg-2 and upstream of syd-2, possibly as a positive regulator of the latter.  Required for the control of movement, egg-laying and the correct localization of elks-1 (By similarity).
What are the official names of this protein?
Rho GTPase-activating protein syd-1, Synapse defective protein 1.
What are the subcellular locations of this protein?
Synapse. Note=Presynaptic terminals.
Protein: MURA2_STRP1
Sequence: MRKIIINGGKALSGEVAVSGAKNSVVALIPAIILADDIVILDGVPAISDVDSLIEIMELMGATVNYHGDTLEIDPRGVQDIPMPYGKINSLRASYYFYGSLLGRFGQAVVGLPGGCDLGPRPIDLHLKAFEAMGVEVSYEGENMNLSTNGQKIHGAHIYMDTVSVGATINTMVAATKAQGKTVIENAAREPEIIDVATLLNNMGAHIRGAGTDIITIQGVQKLHGTRHQVIPDRIEAGTYIALAAAIGKGVKITNVLYEHLESFIAKLEEMGVRMTVEEDAIFVEKQESLKAITIKTSPYPGFATDLQQPLTPLLLKADGRGTIIDTIYEKRINHVPELMRMGADISVIGGQIVYQGPSRLTGAQVKATDLRAGAALVTAGLIAEGKTEITNIEFILRGYASIIAKLTALGADIQLIED
What is the function of this protein?
Cell wall formation.  Adds enolpyruvyl to UDP-N-acetylglucosamine.
What are the official names of this protein?
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2, Enoylpyruvate transferase 2, UDP-N-acetylglucosamine enolpyruvyl transferase 2, EPT 2.
What is the protein family that this protein belongs to?
Belongs to the EPSP synthase family. MurA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CCSA_ORYNI
Sequence: MLFATLEHILTHISFSTISIVITIHLITLLVRELGGLRDSSEKGMIATFFCITGFLVSRWASSGHFPLSNLYESLIFLSWALYILHMIPKIQNSKNDLSTITTPSTILTQGFATSGLLTEMHQSTILVPALQSQWLMMHVSMMLLSYATLLCGSLLSAALLMIRFRKNLDFFSKKKKNVLLKTFFFNEIEYFYAKRSALKSTFFPLFPNYYKYQLIERLDSWSYRVISLGFTLLTIGILCGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRTNPNWKGTKSAFVASIGFLIIWICYFGINLLGIGLHSYGSFTLPI
What is the function of this protein?
Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
What are the official names of this protein?
Cytochrome c biogenesis protein CcsA.
What is the protein family that this protein belongs to?
Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: GBX2_XENLA
Sequence: MSAAFQPPLMMMQRPLGSSTAFSIDSLIGNPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPPPPSLSQATLQSTLSSAHHHHPIPSLPGGFCSSLAQGMALTSTLMATLPGGFSASTQHQEAARKFGAQSLHGAFEKSDGSQSDGEEGNKTYITKEGTLLPFSASEASLGPVRGQGKEESGKEAEGKGKEDSYLMDSDLDYSSDDNISCQTAHKEEDTPEESPQNSNPSNNSNTSSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHVLKLSEVQVKIWFQNRRAKWKRVKAGNTNSKTGEPSRNPKIVVPIPVHVNRFAIRSQHQQLEQARP
What is the function of this protein?
May act as a transcription factor for cell pluripotency and differentiation in the embryo.
What are the official names of this protein?
Homeobox protein GBX-2, Gastrulation and brain-specific homeobox protein 2, XGBX-2.
What are the subcellular locations of this protein?
Nucleus.
Protein: ENO_PHEZH
Sequence: MTEIVDITAREILDSRGNPTVEVDVILEDGAMGRAAVPSGASTGAHEAVEKRDGDKARYLGKGVRQAVDAVNGEIYDALSGSDAEDQRRIDRMLIELDGTPNKSRLGANAILGVSLATAKAAASSSALPLYKYVGGVSARILPVPMMNIINGGAHADNPIDIQEFMILPTGAETFSEALRMGAEIFHALKKQLKDAGHNTNVGDEGGFAPNIGSAEEALAFIVKAGEGAGYRCGEDFHLGLDVASTEFFKNGKYVMEGEGKTVDPAGMVEYLAGLVSKFPIVTIEDGCAEDDFDGWKILTERLGGKVQLVGDDLFVTNPERLAVGIEKGLANSILVKVNQIGTLSETLDAVDMAHRNSYTAVMSHRSGETEDSTIADLSVATNCGQIKTGSLARSDRTAKYNQLLRIEEELGDQAIYAGRRALRAL
What is the function of this protein?
Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate.  It is essential for the degradation of carbohydrates via glycolysis.
What are the official names of this protein?
Enolase, 2-phospho-D-glycerate hydro-lyase, 2-phosphoglycerate dehydratase.
What is the protein family that this protein belongs to?
Belongs to the enolase family.
What are the subcellular locations of this protein?
Cytoplasm. Secreted. Cell surface. Note=Fractions of enolase are present in both the cytoplasm and on the cell surface. The export of enolase possibly depends on the covalent binding to the substrate; once secreted, it remains attached to the cell surface.
Protein: URIC2_SOYBN
Sequence: MAQQEVVEGFKFEQRHGKERVRVARVWKTRQGQHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQSGFVNFIRDKYTALPDTRERILATEVTALWRYSYESQYSLPQKPLYFTEKYQEVKKVLADTFFGPPNGGVYSPSVQNTLYLMAKATLNRFPDIAYVSLKMPNLHFLPVNISNKDGPIVKFEDDVYLPTDEPHGSIQASLSRLWSKL
What is the function of this protein?
Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
What are the official names of this protein?
Uricase-2 isozyme 2, Nodulin 35, N-35, Non-symbiotic uricase, Urate oxidase, Uricase II isozyme 2.
What is the protein family that this protein belongs to?
Belongs to the uricase family.
What are the subcellular locations of this protein?
Peroxisome.
Protein: LPXK_PASMU
Sequence: MQFWYSRTWITWLMLPLSFLFWLISTCRQFLFRKGIFASYRAPVPVIVVGNLSVGGNGKTPVVIWLVKQLQQKGLKVGVISRGYGSQSSVYPLLVTPDTDPIQGGDEPVLIAKRTQVPVCISANRQHAIELLLQHQPDCDLIISDDGLQHYRLQRDFEIVVLDVQRGFGNGFLLPAGPLRELPSRLNTVDLIICHGQASKYSDVEMTLVPHHAINLVTGESRLLSDFHRVSAIAGIGHPQRFFSMLENLSMQLIQTKAFQDHQTFEAAQFVDFDQTQPLLMTEKDAVKCLSFAQKNWWYVPVEAEIKGEKVRSFLAKFDEIRKTV
What is the function of this protein?
Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
What are the official names of this protein?
Tetraacyldisaccharide 4'-kinase, Lipid A 4'-kinase.
What is the protein family that this protein belongs to?
Belongs to the LpxK family.
Protein: SODM_BORPE
Sequence: MPYVLPALSYAYDALEPHIDARTMEIHHTRHHQTYVNGLNAALEGAGLDSEEPVEQLLRRIPALPPGIHGAVRNHGGGHANHSLLWTVMSPSGGGRPDGRLAADIQAQLGGHDAFQAAFTQAALGRFGSGWAWLTVTPAGRLRVDSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEYIEAFYRVVDWAEVARRYEIALAELGREAA
What is the function of this protein?
Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
What are the official names of this protein?
Superoxide dismutase [Mn].
What is the protein family that this protein belongs to?
Belongs to the iron/manganese superoxide dismutase family.
Protein: AUSQ_EMENI
Sequence: MPPSPDFEAFSLTPIDQANGQVFFFYNISYRVRNEASALQTIHNAIDVLLEKVPFLNGEIAFPAPVPDANNVLIVRPPRAKSEDQVPLVQVKRHSNCALPVKKLEQSPFNVPSSLPLNGLFNPLAAYPTPNRPTPVIRFQINLVNDGLILTLAFNHAVFDALGAAVIVKLLAESCRNQDKIGMDGRLGIPSTQARVRSPLLALSSRLKKNNRARVDAPSPSEFSENISHRPVAAPPPLKDECFVFCAEKLQQLRIACTSILEKLHENQKSVTGQGDVRFLSINDVLTALICESIAQARHAAKHPYRDEKLHAKPSVSECLMAVDLRKFVEPPLPHDYMGNAAIPLRFEVSSQRHASPDFHRAVREVPTGLNTSFFLAIAKTAYTIRAKLARFGESYIDSLSSFLNAHEEQKAVNILPACAIVSSLRHIKTYELQFGAELGEIQAFETGIPWVNGSCIILPLCANSSDVAGSAPWNVRITLDESTMYCFKNEPALRWALLEQGKSKVLGPCDCKADV
What is the function of this protein?
O-acyltransferase; part of the gene cluster B that mediates the biosynthesis of austinol and dehydroaustinol, two fungal meroterpenoids (PubMed:22329759).  The first step of the pathway is the synthesis of 3,5-dimethylorsellinic acid by the polyketide synthase ausA (PubMed:22329759).  3,5-dimethylorsellinic acid is then prenylated by the polyprenyl transferase ausN (PubMed:22329759).  Further epoxidation by the FAD-dependent monooxygenase ausM and cyclization by the probable terpene cyclase ausL lead to the formation of protoaustinoid A (PubMed:22329759).  Protoaustinoid A is then oxidized to spiro-lactone preaustinoid A3 by the combined action of the FAD-binding monooxygenases ausB and ausC, and the dioxygenase ausE (PubMed:22329759, PubMed:23865690).  Acid-catalyzed keto-rearrangement and ring contraction of the tetraketide portion of preaustinoid A3 by ausJ lead to the formation of preaustinoid A4 (PubMed:22329759).  The aldo-keto reductase ausK, with the help of ausH, is involved in the next step by transforming preaustinoid A4 into isoaustinone which is in turn hydroxylated by the P450 monooxygenase ausI to form austinolide (PubMed:22329759).  Finally, the cytochrome P450 monooxygenase ausG modifies austinolide to austinol (PubMed:22329759).  Austinol can be further modified to dehydroaustinol which forms a diffusible complex with diorcinol that initiates conidiation (PubMed:22234162, PubMed:22329759).  Due to genetic rearrangements of the clusters and the subsequent loss of some enzymes, the end products of the Emericella nidulans austinoid biosynthesis clusters are austinol and dehydroaustinol, even if additional enzymes, such as the O-acetyltransferase ausQ and the cytochrome P450 monooxygenase ausR are still functional (PubMed:29076725).
What are the official names of this protein?
O-acyltransferase ausQ, Austinoid biosynthesis clusters protein Q.
What is the protein family that this protein belongs to?
Belongs to the fumigaclavine B O-acetyltransferase family.
Protein: RS10_AZOVD
Sequence: MQNQQIRIRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPTRKERYTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDALMKLDLAAGVEVQISLG
What is the function of this protein?
Involved in the binding of tRNA to the ribosomes.
What are the official names of this protein?
30S ribosomal protein S10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS10 family.
Protein: NU3C_PELHO
Sequence: MFLLYEYDLFWVFLIISSLIPILAFLISGVLAPISEGPEKLSSYESGIEPMGDAWLQFRIRYYIFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALVFVLILIVGSVYAWRKGALEWS
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic, NAD(P)H dehydrogenase subunit 3, NADH-plastoquinone oxidoreductase subunit 3.
What is the protein family that this protein belongs to?
Belongs to the complex I subunit 3 family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Multi-pass membrane protein.
Protein: RPS4W_ARATH
Sequence: METSSISTVEDKPPQHQVFINFRGADLRRRFVSHLVTALKLNNINVFIDDYEDRGQPLDVLLKRIEESKIVLAIFSGNYTESVWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKGKFGDRFRSMAKGDERKKKWKEAFNLIPNIMGITIDKKSVESEKVNEIVKAVKTALTGIPPEGSHNAVVGALGNSNAGTSSGDKKHETFGNEQRLKDLEEKLDRDKYKGTRIIGVVGMPGIGKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLNNPHVDNLKDPYSQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIATSDMSLTNGLVDDTYMVQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSMDHWNSKMKKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIACFRSQDKDYVESLLASSDLGSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSREIDLKASNQDGSRQRRLWLHQHIIKGGIINVLQNKMKAANVRGIFLDLSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKTNNKINIPDKLKLPLKEVRCLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEMNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSCLDPQDQVSRLSVTCTFKVKDEDKSWVPYTCPVGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNSDECNPTEASLKFTVTGGTSENGKYKVLKCGLSLVYAKDKDKNSALETKYDMLIGKSFQETSEGVDGRVKKTKGKYVMPVEKNFQETTEGVDGRVKKKKKTRMDNGRPKKKQRSGRDDNQTRMQVELQEGNINSVIMHTVKNF
What is the function of this protein?
Disease resistance (R) protein that specifically recognizes the AvrRps4 type III effector avirulence protein from Pseudomonas syringae.  Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein.  That triggers a defense system including the hypersensitive response, which restricts the pathogen growth.  The combined presence of both regular and alternative RPS4 transcripts with truncated open reading frames (ORFs) is necessary for function.  RPS4 function is regulated at multiple levels, including gene expression, alternative splicing, and protein stability.  Acts as a disease resistance protein involved in resistance to fungal and bacterial pathogens, including R. solanacearum, P. syringae pv.  tomato and C. higginsianum.  In presence of RRS1, elicites an EDS1-dependent hypersensitive response (PubMed:24146667).
What are the official names of this protein?
Disease resistance protein RPS4, Resistance to Pseudomonas syringae 4.
What are the subcellular locations of this protein?
Nucleus.
Protein: RL21_CUPMC
Sequence: MYAVVKTGGKQYKVAAGEKLKVEQIPADIGAEITLDQVLAVGAGDQIKFGTPLVSGASVKATVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELRIEAIVA
What is the function of this protein?
This protein binds to 23S rRNA in the presence of protein L20.
What are the official names of this protein?
50S ribosomal protein L21.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL21 family.
Protein: YU230_STAAU
Sequence: MKIAVMTDSTSYLSQDLIDKYNIQIAPLSVTFDDGKNFTESNEIAIEEFYNKMASSQTIPTTSQPAIGEWITKYEMLRDQGYTDIIVICLSSGISGSYQSSYQAGEMVEGVNVHAFDSKLAAMIEGCYVLRAIEMVEEGYEPQQIIDDLTNMREHTGAYLIVDDLKNLQKSGRITGAQAWVGTLLKMKPVLKFEDGKIIPEEKVRTKKRAIQTLEKKVLDIVKDFEEVTLFVINGDHFEDGQALYKKLQEDCPSGYQVAYSEFGPVVAAHLGSGGLGLGYVGRKIRLT
What is the function of this protein?
May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
What are the official names of this protein?
DegV domain-containing protein.
Protein: SSTT_ACTP7
Sequence: MSNPSLSSKLLGGNLVLRIAIGLVLGACLALVNPDWAKNVGVLGQFFVKSLRAIAPILVFVLVLSAIANKEVGSDSKLKPILVMYVLGTFVAALTAVVLSFMFPTTLELVSNPDNLNPPQGIGEIIKTVVFNLVDNPLQALANANFIGILAWAIGLGIALRHAAPSTKTFLNDFAEAVSFVVKVVIAFAPIGVFGLVAETIATNGADAFVGYARLLGVLLGAMVIVAFVLNPLIVFWKIRRNPYPLTLTCLRESGVTAFFTRSSAANIPVNMNLAKRLGVRDEIASVAIPLGATINMAGAAITVTVLTLAAAYTQGIQPDFATALLLSIVASVCACGASGVAGGSLLLIPLACSLFNIPNDIAAQVIGVGFIIGVIQDSAETALNSSTDVLFTAAVSQAEDQKA
What is the function of this protein?
Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system).
What are the official names of this protein?
Serine/threonine transporter SstT, Na(+)/serine-threonine symporter.
What is the protein family that this protein belongs to?
Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: TRPA_GEOMG
Sequence: MSRITGTFAELKRTGKKALVTFITAGDPDLATTEELIPLLAENGADIIELGVPFSDPMADGPTIQLSSERALAAGTTLSRILATVKSVRGRTQVPIVLMGYFNPIFSYGLERFAADAAAAGVDGVLLVDLPPEEAGEFKACADRHGIDVIFLLTPTSDETRIRTVTNRARGFIYYVSVTGVTGVRSGIEASVAGNVNIIKECSKVPVAVGFGIATPEQAGEVAATADGVVVGSAIVKLFEKHRGEELKGALATFVSSLKQAVDRGRYDN
What is the function of this protein?
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.
What are the official names of this protein?
Tryptophan synthase alpha chain.
What is the protein family that this protein belongs to?
Belongs to the TrpA family.
Protein: NQOR_YERPE
Sequence: MAKILVLYYSMYGHIETLAGAIAEGARKVSGVDVTIKRVPETMPAEAFAKAGGKTNQQAPVATPHELADYDGIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKVASVFASTGTGGGQEHTITSTWTTLAHHGFIIVPIGYGAKELFDVSQTRGGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKLKG
What are the official names of this protein?
NAD(P)H dehydrogenase (quinone), Flavoprotein WrbA, NAD(P)H:quinone oxidoreductase, NQO.
What is the protein family that this protein belongs to?
Belongs to the WrbA family.