PharMolix/UniProtQA huggingface dataset:
Protein: SLYA_ECO8A
Sequence: MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG
What is the function of this protein?
Transcription regulator that can specifically activate or repress expression of target genes.
What are the official names of this protein?
Transcriptional regulator SlyA.
What is the protein family that this protein belongs to?
Belongs to the SlyA family.
Protein: THTR_CORGL
Sequence: MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAELMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAFVAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNPADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKNNVSVS
What are the official names of this protein?
Thiosulfate sulfurtransferase.
Protein: KDSA_BART1
Sequence: MTKPNARVKVGNIIFSNEMPLSLIAGPCQMESRDHAFEMAGRIKTMTDQLGIGFVYKSSYDKANRTSLSAARGIGLEKAMAIFSDLKKEFDCPILTDVHTEEQCTIVSSTVDILQIPAFLCRQTDLLVAAAKTGCVVNIKKGQFLAPWDMENVLKKVVHSGNPNVMLCERGTSFGYNRLISDMRSLPILRSFGAPVIFDATHSVQEPGGQGASSGGQRQFVEVLARAAVSVGVAGIFLETHQDPDHAPSDGPNMIKIDDLQRLIETLMEFDDLSKKLN
What are the official names of this protein?
2-dehydro-3-deoxyphosphooctonate aldolase, 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase, KDO-8-phosphate synthase, KDO 8-P synthase, KDOPS, Phospho-2-dehydro-3-deoxyoctonate aldolase.
What is the protein family that this protein belongs to?
Belongs to the KdsA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CISY_MYCSM
Sequence: MTTATESEAPRIHKGLAGVVVDTTAISKVVPETNSLTYRGYPVQDLAAQCSFEQVAYLLWHGELPTDQLALFSQRERASRRIDRSMQALLAKLPDNCHPMDVVRTAISYLGAEDLEEDVDTAEANYAKSLRMFAVLPTIVATDIRRRQGLTPIPPHSQLGYAQNFLNMCFGEVPEPVVVRAFEQSMVLYAEHSFNASTFAARVVTSTQSDIYSAVTAAIGALKGSLHGGANEAVMHDMLEIGSAEKAPEWLHGKLSRKEKVMGFGHRVYKNGDSRVPTMKVALEQVAQVRDGQRWLDIYNTLESAMFAATRIKPNLDFPTGPAYYLMDFPIESFTPLFVMSRITGWTAHIMEQAASNALIRPLSEYSGQPQRSLV
What are the official names of this protein?
Citrate synthase.
What is the protein family that this protein belongs to?
Belongs to the citrate synthase family.
Protein: TRYP_STRGA
Sequence: MTHTTTIAAKRGGLALAKKAAAAGAVALAVASLQPVSAAHAADARVIGGKPAAQNEFPFMVHLSMGCGGALYKKDIVLTAAHCMDGSGNNTRITVTAGVADLNSSGAIKVKSTKVKVAPGYDGVGKDWALIKLAKPIDRPTLKIATTAKYNRGTFTIAGWGDVREGAGTGTTKLQKANVPFVSDRACKWHYGNRLVPKQELCAGYASGGIDTCQGDSGGPMFRKDDAGKWIQVGIVSWGDGCARSGVPGVYTEVSTFAKDIAKAASAL
What is the function of this protein?
Protease that shows preferential cleavage after Arg and Lys residues.
What are the official names of this protein?
Trypsin-like protease.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1 family.
Protein: DAPA_STAA1
Sequence: MTHLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASFQAKALGADAIMLITPYYNKTNQRGLVKHFEAITDAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLEFGNYELRLPLVSLEDTDTKVLREAYDTFKAGENE
What is the function of this protein?
Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
What are the official names of this protein?
4-hydroxy-tetrahydrodipicolinate synthase, HTPA synthase.
What is the protein family that this protein belongs to?
Belongs to the DapA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL11_ECO55
Sequence: MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED
What is the function of this protein?
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L11.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL11 family.
Protein: XERDL_STRPM
Sequence: MKSYIEPFIASKALSQNSQKAYRYDLQQFCQLIGERVNQDKLLLYQNSIANLSLSAKKRKLSTANQFLYYLYQIKYLNSYFRLTDTMKVMRTEKQQAAIINTDIFYQKTPFVWGQLISLLILELGLTPSEVAGIEVANLDLNFQMLTLKTKKGVRVLPLSQILIPFLEQQLVGKEAYLFEHRGIPFSRQWFFNHLKTFVRSIGYEGLTAQKLREQFILKEKLAGKSIIELSDILGLKSPVTLEKYYKS
What is the function of this protein?
Putative tyrosine recombinase.  Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site.
What are the official names of this protein?
Tyrosine recombinase XerD-like.
What is the protein family that this protein belongs to?
Belongs to the 'phage' integrase family. XerD-like subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SDH4_ORYSJ
Sequence: MASRLLARSKALALALSRADAAAPGPAAGVQWLRTLSSLPRDPAAAASPAPAPRQPAVGSPLGLSKIPGYEQTSRLSGTQVLPRWFSTGTSNGSSAQQEGATRKVMAFSPLEASIAKPRKGPLTSESWKVKQTELLTRSTYYMIPTLLLVSKNSISTSLLVASVFHQVYMFYKEILLDYVHHDITRKWVFIYFKILLIIMAKETVVYFDLF
What is the function of this protein?
Membrane-anchoring subunit of succinate dehydrogenase (SDH).
What are the official names of this protein?
Succinate dehydrogenase subunit 4, mitochondrial.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Single-pass membrane protein.
Protein: HIS4_SULTO
Sequence: MLKVVPSIDISEGKAVKRIRGVKGSGLILGNPVKIAYEIYEEGYDYLHVVDLDSAEENGNNEEYVKDICKIGFKWVQVGGGIRNVEKAERLLDYDCSAIVISTLPIKDPKSFMDIQKIIGKDKILLSVDYDSSGYVLIRGWKEKSIKVLDFLLSYDSLGYIFTYVENEGTKRGIDNNVKNYVIRIKGLKEYAGGIGSIEDLYKLNEYGINYAIIGMSFYSGSLRGIKYVY
What are the official names of this protein?
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GGGPS_CENSY
Sequence: MGAVEARLRSELKKRKTLLFALIDSEVSDTKSAQDLARGAEKAGASAILVGGSSTGDQAETSRIVGDIKEATTIPVILFPGNVTGVAPGADAILFSSLMNSENPYFITQAQALGAPSVLKFGLEALPTAYLVIGEGTSVWFVGAARGIPLGKPRIAAAYSLAARFLGMRFVYLEAGSGAESPVKPEMIRAVREAFDGFLIVGGGIRDEEAARRASEAGADAIVIGTMLEGGGSLDKLSRIAGAIGGT
What is the function of this protein?
Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).  This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
What are the official names of this protein?
Geranylgeranylglyceryl phosphate synthase, GGGP synthase, GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase, Phosphoglycerol geranylgeranyltransferase.
What is the protein family that this protein belongs to?
Belongs to the GGGP/HepGP synthase family. Group II subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UCRIA_SOLTU
Sequence: MASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMKINGHGMGKDKRMKAKCMAASIPADDRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
What are the official names of this protein?
Cytochrome b6-f complex iron-sulfur subunit, chloroplastic, Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein, Rieske iron-sulfur protein, ISP, RISP.
What is the protein family that this protein belongs to?
Belongs to the Rieske iron-sulfur protein family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein. Note=The transmembrane helix obliquely spans the membrane in one monomer, and its extrinsic C-terminal domain is part of the other monomer.
Protein: Y1113_METJA
Sequence: MGHYFINLFTYTIIAFIFSAVLCKFLMKKMINYKFGYDLHKKEKIKVPEMGGLAVLFSNALFIPFVNPIFVLPIITAGIIGIVDDIAKLSPKEKLILLFISGLIIGILFYNNSYVNLIEILIIALGIMISSNLTNMLAGFNGLEIGMGVIASISLALVLFLDNYTTGFLSALIFSASYLGLLIFNKYPAKVFPGDVGTLPIGAFLAVLAVVYKEYIPFLVIMMPYVIDASLKYLSAGVMSRDEHKPTTLKEDGKLYYIGGYLSLPRLILKYKPMREPHLVTVLWIIGIFFGIVGILISLIA
What are the official names of this protein?
Putative glycosyltransferase MJ1113.
What is the protein family that this protein belongs to?
Belongs to the glycosyltransferase 4 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: EFP_FLAJ1
Sequence: MASTSDIRNGLCIKFNHDIYKIIEFLHVKPGKGPAFVRTKLKSLTSGKVLDNTFSAGHKIDVIRVETHTFQFLYPEGDEFHFMNAETFEQISLNKNILDAPDLLKEGTNVMVQINTETDLPLSVDMPASVILEVTYAEPGVKGNTATNATKNATVETGANVNVPLFINEGDKIKIDTASGSYMERVKE
What is the function of this protein?
Involved in peptide bond synthesis.  Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro.  Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
What are the official names of this protein?
Elongation factor P, EF-P.
What is the protein family that this protein belongs to?
Belongs to the elongation factor P family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y2646_RHIL3
Sequence: MSKPPSDPPRRAPAAFIYEDEATERRDNGRQGGERRKPESFSEHIVVTPDEDDPFLNPDKDLSAVPVAAPRKRRTSFGKIAAGAFGILLSLAIGLWTDSLIRDLFTRADWLGYAALAVLAVGILAVLALVIRETSGMMRLATVQTIKAEADAAMLETRPVKARAVVARLTALLSANPETAKGRATLKATEGEVIDPPHLMALAERELLAPLDRKARALIVNASKRVSIVTAVSPRAVVDLLYVLYEAVRLIRAMAELYGSRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLASKLSARLGEGVINGLMTARIGIAAMDLCRPLAFRALKRPGIGDFIGDLTPSMSPRGNNP
What are the official names of this protein?
UPF0283 membrane protein RL2646.
What is the protein family that this protein belongs to?
Belongs to the UPF0283 family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: RL18_YERPG
Sequence: MDKKAARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNGSEILVAASTVEKAINEQLKYAGNKDAAAAVGKTIAERALEKGITKVSFDRSGFQYHGRVQALADAAREAGLQF
What is the function of this protein?
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L18.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL18 family.
Protein: NRDR_SHIB3
Sequence: MHCPFCFAVDTKVIDSRLVGGGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
What is the function of this protein?
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.
What are the official names of this protein?
Transcriptional repressor NrdR.
What is the protein family that this protein belongs to?
Belongs to the NrdR family.
Protein: BBR_ARATH
Sequence: MPMENDNGPHVGNVVVTAEQATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVAVAVPVEESGSISVGELPAPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEISDYGSWETGSYVYDEDEFDDPENEDEDDDEDEYETDDDPQEDGLDVNVHANEDDQEDDGNSDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS
What is the function of this protein?
E3 ubiquitin-ligase probably involved in organ size regulation.
What are the official names of this protein?
E3 ubiquitin ligase BIG BROTHER-related, AtBBR, RING-type E3 ubiquitin transferase BIG BROTHER-related.
Protein: SCR20_NOTSL
Sequence: MPNYTLYYFNGRGRAEICRMLMAAAGVQYTDKRFEFNEWDKYRNDMPSMCVPVLDIDGQNKMPETMAIARYLARENGYYGKNNMDMFRIDYICDCFYEILHDYMRYFHTKNGRFMQGSGTDMSPDMDPTQMTSYIQNRYLDTCRRILSFLERTLEMRNGGKEFFMGDQMMLCDMMCYCCLENPMLEDQTTFNNFPKLMSLWKRVASHPKITPYLKKRNNTNW
What is the function of this protein?
S-crystallins are structural components of squids and octopi eye lens.  Contains relatively little if any GST activity.
What are the official names of this protein?
S-crystallin SL20-1, Major lens polypeptide.
What is the protein family that this protein belongs to?
Belongs to the GST superfamily.
Protein: RL34_LATSS
Sequence: MTTKRTFQPKKRHKERVHGFMKRMNTKNGRKVLARRRAKGRKVLSA
What are the official names of this protein?
50S ribosomal protein L34.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL34 family.
Protein: GEMI8_MOUSE
Sequence: MASNWRASASWYSHPVYARYWQHYHHAMLWMQGHQNAYRKFRDSYFTSPWLFPHGALPWNSPAYEAGHPWDSQGQHMAQQESPYRVSHPKSPGQPLRNSSRTQASTRGNEARCEEEELESDSDDEVECDLSNMEITEELRQYFAQTERHREERRRQQQLDAERLNDYVNADHGLYFNHRRSLEPPSEKPWERRQAEMKRLYGNSAPKILAMETAVQLSFDKHCDRKQPKYWPVIPLKF
What is the function of this protein?
The SMN complex catalyzes the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome, and thereby plays an important role in the splicing of cellular pre-mRNAs.  Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP (Sm core).  In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the chaperone CLNS1A that controls the assembly of the core snRNP.  To assemble core snRNPs, the SMN complex accepts the trapped 5Sm proteins from CLNS1A forming an intermediate.  Binding of snRNA inside 5Sm triggers eviction of the SMN complex, thereby allowing binding of SNRPD3 and SNRPB to complete assembly of the core snRNP (By similarity).
What are the official names of this protein?
Gem-associated protein 8, Gemin-8, Protein FAM51A1.
What are the subcellular locations of this protein?
Nucleus, gem. Cytoplasm. Note=Found in nuclear bodies called gems (Gemini of Cajal bodies) that are often in proximity to Cajal (coiled) bodies. Also found in the cytoplasm (By similarity).
Protein: FABP_SCHJA
Sequence: MSSFLGKWKLSETHNFDAVMSKLGVSWPIRQMGNTVTPTVTFTMDGDTMTMLTESTFKNLSVTFKFGEEFDEKTSDGRNVKSVVTKDSESKITQTQKDAKNTTVIVREIVGDTMKTTVTVDDVTAIRNYKRL
What is the function of this protein?
May play a role in the transport of fatty acids.  Binds to various fatty acids but not retinoids.
What are the official names of this protein?
Fatty acid-binding protein, Sj-FABPc, Sj14FABP.
What is the protein family that this protein belongs to?
Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VNS2_BTV1S
Sequence: MEQKQRRFTKNIFVLDANGKTLCGRIAKLSSQPYCQIKIGRVIAFKPVKNPEPKGYVLNVPGPGAYRIQDGQDIISLMLTPHGVEATTERWEEWKFEGVSVTPMATRVQHNGVMVDAEIKYCKGMGIVQPYMRNDFDRNEMPDLPGVMRSNYDVRELRQKIQNERESAPRLQVQSVSPREESRWMDDDEAKVDEEAKEMIPGPSRLKKLREARSNVFKEVEAEINWNLDEKDEEDRDEREDEEQVKTLSDDDEQGEDASDDEHPKTHITKEYIEKVAKQIKLKDERFMSLSSAMPPASGGFDRMIVTKKLKWQNVPLYCFDESSKRYELQCVGACERVAFVSKDMSLIILRSAFRRL
What is the function of this protein?
Single-stranded RNA-binding protein.
What are the official names of this protein?
Non-structural protein NS2.
What is the protein family that this protein belongs to?
Belongs to the orbivirus non-structural protein NS2 family.
Protein: RIBBA_THEP3
Sequence: MFDRIEDAIEDIKQGKMIIVVDDENRENEGDLVMAAEKVTGEHINFMIKYGRGLVCVPMTEKRLNELGIYQMVENNTDHKETAFTVSVDYKECTTGISAFERALTVKKLVDDNSKPEDFTKPGHIFPLRAKDGGVLVRAGHTEAAVDLAVLAGLKPAGVICEIIKDDGNMARLPDLLEFAKKFGLRIISIEDLIKYRMKNEILVRRVAQAKLPTKYGNFEIVGYEEILTRKQHVALIKGDINKEPVLVRIHSECLTGDILGSLRCDCGDQLHAAMERIGQEGGVLVYLRQEGRGIGLLNKIKAYHLQDQGLDTVEANIKLGFPPDLREYSIAAQILKDIGVKKIRIMTNNPQKIMELSDYGLDVVERVSIEICPNHYNEKYLKTKKERMGHLILEV
What is the function of this protein?
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
What are the official names of this protein?
Riboflavin biosynthesis protein RibBA.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the GTP cyclohydrolase II family.
Protein: TRAS2_ECOLX
Sequence: MKRSDLEKDAAYILDKFKQLDYEIPSNRQILKVIFYKLVVVYVFQLLFIIFDIFINSNVRDYHYFDTFVITLGSNAFFSLVFLMSTYNLVSLKISLGSEITEQSVLLKLVERKINSYGQFLMVVNAIVGCVLLSSGERFVAGLGFSWFVTYLISMITLQTSLSRYMTPAVVSSLSKVKELLSASPK
What is the function of this protein?
Involved in surface exclusion.
What are the official names of this protein?
Protein TraS.
Protein: CT51_CONAA
Sequence: MRCLPVFVILLLLIASAPSVDAQPKTKDDVPLAPSHDNAKSALQHLNQRCCPTFYFCCNLSGG
What is the function of this protein?
Probable toxin that inhibits ion channels.
What are the official names of this protein?
Conotoxin Am5.1.
What is the protein family that this protein belongs to?
Belongs to the conotoxin T superfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: RLMC_ECOLI
Sequence: MQCALYDAGRCRSCQWIMQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHEQLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGDVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ
What is the function of this protein?
Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA.
What are the official names of this protein?
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC, 23S rRNA(m5U747)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily.
Protein: RECF_KLEP7
Sequence: MSLTRLLIKDFRNIESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRVIRHEQDAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLVKQRNAALRQVSRYAQLRPWDLELIPLAEQISRWRAEYSAAIVEDMADTCQQFLPEFTLTFSFQRGWEKETDYAEVLERNFERDRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRVSGRRCLYLIDDFASELDDARRGLLSSRLKATQSQVFVSAISAEHVMDMSDKNSKMFRVEKGKITD
What is the function of this protein?
The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility.  RecF binds preferentially to single-stranded, linear DNA.  It also seems to bind ATP.
What are the official names of this protein?
DNA replication and repair protein RecF.
What is the protein family that this protein belongs to?
Belongs to the RecF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CYF_SYNJA
Sequence: MKRIYLALCALLLLLGTGSRPAAAYPYYAQMAYDNPREATGKIVCANCHLNAMPARAEVPQAVTPGQVFTIKVGIPYDLSKQQVLADGSKGGLNVGAVVVLPEGFRLATEEEMTEEQRQETAETYITPYSDEKPNILLVGPLPGEQHQEIVFPVVAPDPKEDPSVAFMKYRVYIGANRGRGQINPDGSLSNNNVFRAPATGRLTSIATIESDLSDLPPELAALVPPEYELPGTRVLSFETEGGLKHLVVPPGPELVVNIGDSVQEGDPVTNNPNVGGFGQVERDLVLQNPERVKWLVAFLAAVAITQLLLVLKKKQVELIQAAELLG
What is the function of this protein?
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
What are the official names of this protein?
Cytochrome f.
What is the protein family that this protein belongs to?
Belongs to the cytochrome f family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Single-pass membrane protein.
Protein: TRUD_ECOLC
Sequence: MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
What is the function of this protein?
Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
What are the official names of this protein?
tRNA pseudouridine synthase D, tRNA pseudouridine(13) synthase, tRNA pseudouridylate synthase D, tRNA-uridine isomerase D.
What is the protein family that this protein belongs to?
Belongs to the pseudouridine synthase TruD family.
Protein: YMEL_STRLN
Sequence: MSKVEESIEVGVPVHTAYNQWTQFETFPQFMSGVERIEQRTDTLTHWVTSVNGVHKEFDAEITEQIPDERVAWTTVGGEAEQAGVVTFHRLDDDHTKVMLQMDFHPDSVTEKVGDKLGFVKRQTKGDLERFKKFIEERGQETGGWRGAVI
What are the official names of this protein?
Uncharacterized 17.2 kDa protein in melC2-rnhH intergenic region, ORF3.
Protein: RL4_PONAB
Sequence: MACARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKARNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAAALQAKSDEKAAVAGKKPVVGKKGKKAAVGVKKQKKPLVGKKAAATKKPAPEKKPAEKKPTTEEKKPAA
What is the function of this protein?
Component of the large ribosomal subunit.  The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.
What are the official names of this protein?
60S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: C3H27_ORYSJ
Sequence: MIKESSSPALDADKIEVPSPKDENNSSNSEAATDNEDFEISDDDDDDRNHKHRKREARPQSFDENTEQSPGGPLKKRHKISGGADSHGEAQKDFFPKFKRRPGAGAHSRAPRVNPSFRDSSASVAARAPMTRGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGPALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQNEPGTAPVNTSSLGGSKGVPAKDIKSAVTNDVLKLNGTTALAVSDADVYDPDQPLWNNEHPDASAGFAHTDGVWNAESLGYEAAREQGNQVLAADSSQNSKSSVWGRIASKKLGHGKTANATSTSATGNKRNESYDEMAPSTVHVNPASAKDSNGQSNSRIFGDVGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKREEAEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNRGKENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLELLEELRKKQEILAQKRDEFRRQLEKLAKQKGLANSAKQAEAGGKEVASNDVHRVTDSKSMNTGTEGPRDAAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFRILPPLPPEIADESVLKDHFMSFGELSSVVLEDTEAYNHDATLKPSLSCSACVTYTTRQSAEKAFIGGKSCKGHTLRFMWLTASPGSTNHSRFQKTSIPARASSFSSQTQNMPSESSTTVGKMSSTVKSSTTAKPHSESMPTATSAKTSVEIPKALSSRDSDVSQ
What are the official names of this protein?
Zinc finger CCCH domain-containing protein 27, OsC3H27.
Protein: GH_HHV6U
Sequence: MLLRLWVFVLLTPCYGWRPLNISNSSHCRNGNFENPIVRPGFITFNFYTKNDTRIYQVPKCLLGSDITYHLFDAINTTESLTNYEKRVTRFYEPPMNDILRLSPVPSVKQFNLDRSIQPQVVYSLNMYPSQGIYYVRVVEVRQMQYDNVSCKLPNSLKELIFPVQVRCAKITRYVGEDIYTHFFTPDFMILYIQNPAGDLTMMYGNTTSINFKAPYKKSSFIFKQTLTDDLLLIVEKDVIDVQYRFISDATFVDETLNDVDEVEALLLKFNNLGIQTLLRGDCKKPNYAGIPQMMFLYGIVHFSYSTKNTGPMPVLRVLKTHENLLSIDSFVNRCVNVSEGTLQYPKMKEFLKYEPSDYSYITKNKSISVSTLLTYLATAYESNVTISKYKWTDIANTLQNIYEKHMFFTNLTFSDRETLFMLAEIANIIPTDERMQRHMQLLIGNLCNPVEIVSWARMLTADRAPNLENIYSPCASPVRRDVTNSFLKTVLTYASLDRYRSDMMEMLSVYRPPNMERVAAIQCLSPSEPAASLTLPNVTFVISPSYVIKGVSLTITTTIVATSIIITAIPLNSTCVSTNYKYAGQDLLVLRNISSQTCEFCQSVVMEYDDIDGPLQYIYIKNIDELKTLTDPNNNLLVPNTRTHYLLLAKNGSVFEMSEVGIDIDQVSIILVIIYILIAIIALFGLYRLIRLC
What is the function of this protein?
The heterodimer glycoprotein H-glycoprotein L is required for the fusion of viral and plasma membranes leading to virus entry into the host cell.  Following initial binding to host receptor, membrane fusion is mediated by the fusion machinery composed of gB and the heterodimer gH/gL.  May also be involved in the fusion between the virion envelope and the outer nuclear membrane during virion morphogenesis.
What are the official names of this protein?
Envelope glycoprotein H, gH.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae glycoprotein H family.
What are the subcellular locations of this protein?
Virion membrane; Single-pass type I membrane protein. Host cell membrane; Single-pass type I membrane protein. Host endosome membrane; Single-pass type I membrane protein. Note=During virion morphogenesis, this protein probably accumulates in the endosomes and trans-Golgi where secondary envelopment occurs. It is probably transported to the cell surface from where it is endocytosed and directed to the trans-Golgi network (TGN).