PharMolix/UniProtQA huggingface dataset:
Protein: RIMP_MYCVP
Sequence: MAERSTGLPSQRQVVELLDGEFTRAGYDLEDVVIDAASRPPRITVVTDSDHGLDLDSVAELSRIASELLDGLDSAPYVLEVTSPGVDRPLTTEKHYRRARGRLAEITLTDGSVLTGRIGGVADGTVGVVVREGRSNLSVREIALNAIAKAVVQVEFSPPSPRELELAGVSRKEARA
What is the function of this protein?
Required for maturation of 30S ribosomal subunits.
What are the official names of this protein?
Ribosome maturation factor RimP.
What is the protein family that this protein belongs to?
Belongs to the RimP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYK_STRCO
Sequence: MPIVAQSTETTDWVSRFADEVIAESERRAPGKPGVVVASGLSPSGPIHLGNLREVMTPHLVADEVRRRGHEVRHLISWDDYDRYRKVPAGVPGVDESWAEHIGKPLTSVPAPKGSPHPNWAEHFKAAMVDSLAEMGVEFDGISQTAQYTSGVYREQILHAMKHRRDIDAILDQYRTKKAPAKKSQKPLDEAELEAAEGSGAAAEDDGSSGSAGYFPYKPYCGNCEKDLTTVTAYDDDSTELTYACTACGFSETVRLSEFNRGKLVWKVDWPMRWAYEGVVFEPSGVDHSSPGSSFQVGGQIVGIFGGEQPIGPMYAFVGISGMAKMSSSKGGVPTPADALKIMEPQLLRWLYARRRPNQSFKIAFDQEIQRLYDEWDRLDAKVADGSALPADAAAHARAVGTAAGELPRTPRPLPYRTLASVADITAGHEDQALRILGELDPANPIASLDEARPRYDKAEAWINTHVPADQRTIVRQEPDAELLKSLDEPSRQSLRLLLDGLADHWSLDGLTHHVYGVPKVQAGFPADATPKELPPEIKTAQRTFFALLYHLLVGRDTGPRLPTLLLAVGQDRVRTLLGE
What are the official names of this protein?
Lysine--tRNA ligase, Lysyl-tRNA synthetase, LysRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FB149_ARATH
Sequence: MMTTIPNLPDELESEILSRVPAKSLAKWKTICKRWYALFRDPRFVKKNLCKSAREVMLLMNDRVHSISVNRHGIDDRFEPSMEFSGKLRSLIDSKDVKVSKEANLARSLNTMYAKLKSNRISKLCGGVMNHFNIR
What are the official names of this protein?
Putative F-box protein At3g17270.
Protein: PER73_ARATH
Sequence: MARFSLVVVVTLSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN
What is the function of this protein?
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.  These functions might be dependent on each isozyme/isoform in each plant tissue.
What are the official names of this protein?
Peroxidase 73, Atperox P73, ATP10a, PRXR11.
What is the protein family that this protein belongs to?
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: TVP38_COPC7
Sequence: MAADSTPGSHHRNLFFQYGKAAIHRYHRLHLYGKAFIWLVILFYIAFGVFVIIVTPARIAQFLYDQAKLLAATRFGWVALLLSIICISFPPLIGHTTLVTLCGFAYGMKGFYIAFAGSILGSALVFVVLRFLFTEKIRSWSAQNEKWQALEAVVRSKGLPLIVLIRVSPFPPWVYANSLFASIEPVKLWQFVAATCFITPKLLLYVFMGSKMAALSDGDQRDRMDTHDKIINGLFLAGSLVIAVFTSWLVYNLVQNHIRHLHGVDPETDELAAEAIEDFDEDAPLLSPTASHRV
What is the function of this protein?
Golgi membrane protein involved in vesicular trafficking and spindle migration.
What are the official names of this protein?
Golgi apparatus membrane protein TVP38.
What is the protein family that this protein belongs to?
Belongs to the TVP38/TMEM64 family.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Multi-pass membrane protein.
Protein: SYI_HAEDU
Sequence: MTDYKDTLNLPETGFPMRGDLAKREPAMLKNWYDKNLYQQIRQTSKGKKTFILHDGPPYANGNLHLGHAVNKILKDIIMKSKTASGFDTPYVPGWDCHGLPIELKVESIVGKPNEKISAAEFRQACREYANEQVDRQKADFIRMGVLGDWDNPYLTMNFNTEASIIRTLAKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFKACDETAIETLFNAKGNGPISAIIWTTTPWTMPSNRAIAIHPELEYALVQLADERVILATELVESVAKAIEAESFDILATVKGETLQLLRFHHPFYAFDVPFIFGDHVTTEGGTGLVHTAPDHGTDDFIIARKNNIEMAGLIGNDGKFKSDVEFFAGLAVFESNEKVIEKLKETGALLKLARIKHSYPHCWRHKTPIIFRATPQWFIGMEKQGLRAQALAEIKTVRWIPNWGEARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRTLDILELVAQRVEQQGIQAWWDLDPTEVLGEDAQHYHKVPDTLDVWFDSGSTYASVVEQRPEFNGQTADMYLEGSDQHRGWFMSSLMLASATNGKAPYQQVLTHGFVVDEKGRKMSKSIGNVIVPSEVWNKNGADILRLWVASTDYTAEMKVSHGILNSAGDAYRRIRNTARFLLSNLNGFIPARDEVKPNEMIALDRWAVSCALEAQNDIIEAYEHYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPILSFTADEIWSHLPTVEGRSEFVFTEQFYSQLFTLNCHDKLDDNYWQQLINIRAEVNRVLEQARNEKTIGAGLEAKVTVYANDEMLPLLHQLGNELRFVLITSQAIVKPLSEADVAEGELAGLAVKVERAEGEKCPRCWHFATDIGTHAEHNAICGRCVENVAGKGEVRRFA
What is the function of this protein?
Catalyzes the attachment of isoleucine to tRNA(Ile).  As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities.  One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP.  The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
What are the official names of this protein?
Isoleucine--tRNA ligase, Isoleucyl-tRNA synthetase, IleRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TRMFO_SORC5
Sequence: MNGAESPHDVVVVGGGLAGCEAAYQLAQRGLRVRLVEMKPHRRTPAQTSDRLAELVCSNSLRGAALSNAVGLLKEELRRVGSLALRCADETSVPAGGALAVDRERFAEAMTRAIEAHPRITVEHREVTEIPAERPVILATGPLTSDALAASLAAAVGAEHLAYYDAIAPIVSADSIDWSRVWKQSRYGKGGAVRGDRAAQREQTAQPERAAPPEDAAERRDDAEAGDEAYVNCPFDEAQYKAFVQALVASEKVEARAFEEVRYFEGCLPCEVMAARGEQTLAFGPMKPVGLTDPRTGRRPYAVLQLRPEDEAATAYNLVGFQTRMKYAEQLRVFRMVPGLEEAEFLRMGSVHRNTFVDAPALLGPAMELRALPGVHLAGQIAGVEGYVESAAAGFLCAILLAQQLRNEPLRPPPPTTALGGILTHLGRKQPTYQPSNITWAHIAPLDPAHGKLRKRARYEVMAERALRDLDAWWAAG
What is the function of this protein?
Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs.
What are the official names of this protein?
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO, Folate-dependent tRNA (uracil-5-)-methyltransferase, Folate-dependent tRNA(M-5-U54)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the MnmG family. TrmFO subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RPOC1_OENEH
Sequence: MIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPERDGLFCERIFGPIKSGICACGTYRVIGDKKEDPNFCEQCGVEFVDSRIRRYQMGYIKLACPATHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLAGLDLRVIIDYSLVEWKELGEERSTGNEWEDRKIGRRKQFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQMDGGKLMSSDINELYRRVIYRNNILADLLTTSRSTPGDLVMGQEKLVQEAVDTLLDNGIRSRPVRDGQNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPTLPLHRCGLPREIAIELFQTFLIRGLIRQHLASDIVGAKSQIREKEPIVWEILQQVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQTEARLLMFSHMNLLSPAMGDPISVPTQDMLIGLYILTSGNPRGICTNRYNPWNRSNYQNERISDNNWKKKEPFFCNSYDAIGAYRQKRIHLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYIIVRSVKTEILWMYIRTTVGHISLFREMEEAIQGFCRARWYLS
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta', PEP, Plastid-encoded RNA polymerase subunit beta', RNA polymerase subunit beta'.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: KA144_MESMA
Sequence: MKIFFAILLILAVCSMAIWTVNGTPFAIKCATNADCSRKCPGNPPCRNGFCACT
What is the function of this protein?
Selectively and reversibly inhibits small conductance calcium-activated potassium channels (KCNN, SK).
What are the official names of this protein?
Potassium channel toxin alpha-KTx 14.4, BmSKTx1, Neurotoxin SKTx1.
What is the protein family that this protein belongs to?
Belongs to the short scorpion toxin superfamily. Potassium channel inhibitor family. Alpha-KTx 14 subfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: SUV3_DROPS
Sequence: MQNTRRCISLICVTRQPPSLRATYGAVAAARCLHRAPPQSSRKKHETNVSTLFKPVQVQANVDCEDVGSELVGKLEKSELLKILNKFTQRRETKSLCSENGLDSYLQQQAFGSFRRYCIEAENLPVDLHIIFSDIMQGAGHIDDIFPYFLRHAKTVFPHLDCMDDLKKISDLRQPANWYTNARALTRKIVFHSGPTNSGKTYHAMERYLSAKTGVYCGPLKLLATEVYNKANERGTPCDLVTGEERKFGISDNSPANHVACTVEMTSVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLIADEVHVCGEAGALELLQKICETTGETVEVRRYDRLTELTVEDSALGSLDNVMPGDCIVCFSKHDIYTVSREIEARGKEVAVIYGGLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSLVKPTMNERGEREIDTISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILAQTPEPLKQAGLHPTADQIELYAYHLPNSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEMIQHVPLPLRARYVFCCAPINRKMPFVCSMFLKIARQYSRNEPITFEFIKSNCGWPFKLPKTILDLVHLESVFDVMDLYRFMDLFPEAGNVREAQKELDEIIQQGVFQITRLLKNTEASQEGETPNYSMRRVTHVKEPRLPSASRGRLTDRLLAQGLLTPGMLSELRKEWDAQQVGQAAAASTSSKESQESPPDDSDDEDSYPGSYKKTRRKRRK
What is the function of this protein?
Major helicase player in mitochondrial RNA metabolism and maintenance.  Likely component of the mitochondrial degradosome (mtEXO) complex, that degrades 3' overhang double-stranded RNA with a 3'-to-5' directionality in an ATP-dependent manner.  ATPase and ATP-dependent multisubstrate helicase, able to unwind double-stranded (ds) DNA and RNA, and RNA/DNA heteroduplexes in the 5'-to-3' direction.  Regulates mRNA stability and is required for the correct processing and maturation of mitochondrial transcripts.
What are the official names of this protein?
ATP-dependent RNA helicase SUV3 homolog, mitochondrial.
What is the protein family that this protein belongs to?
Belongs to the helicase family.
What are the subcellular locations of this protein?
Mitochondrion. Note=Unlike in mammals, does not localize to the nucleus.
Protein: BDNF_BOACO
Sequence: SCMKAAPMKEVSIRGQGSLAYPGLRTQGNLETLGGPNDATRGLTSLADTFEHVIEELLDEQQVIQPSKENKDADLYSTRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSTSEWVTAAEKKTAVDMSGATVTVLEKVPVPKGQLKQYFYETKCSSKGYAKEGCRGIDKRYWNSQCRTTQSFVRALTMDNKKRVGWRFIRIDTSC
What is the function of this protein?
Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it.
What are the official names of this protein?
Brain-derived neurotrophic factor, BDNF.
What is the protein family that this protein belongs to?
Belongs to the NGF-beta family.
What are the subcellular locations of this protein?
Secreted.
Protein: AB9C_ARATH
Sequence: MFKPFGFAAETGSHLLTTQWLQLGNSLCLKERISIAMQVTFLAFFLIHLALKWFGVVRNRGSNDVEEDLKKQSITVKQSFSYNISLLCSVSILGTHCFILLLLFRDSVVSRCDSSVSVFSAEVSQSFSWLFVSVVVVKIRERRLVKFPWMLRSWWLCSFILSFSFDAHFITAKHEPLEFQDYADLTGLLASLFLLAVSIRGKTGFHLLESSGNTEPLLLGDQTEQNKKDSYSSSSPYGNATLFQRITFSWINPLFSLGYKRPLEKDDVPDIDVKDSARFCSHAFDQKLKTTKEKEGPGNAFFYNSVLRYVWRKAAINAVFAVVNASTAYIGPYLINDFVEFLSEKQSQSLNHGYLLALGFLTAKIVETVTQRQWIFGARQLGLRLRAALISHIYQKGLVLSSQSRQSHTSGEIINYMSVDVQRITDFIWYVNNIWMLPIQIFSAIYILQKHLGLGALAALVTTLMVMACNYPLTRLQRNYQSDIMNAKDDRMKATSEILKNMKILKLQAWDNQFLNKVKTLRKKEYDCLWKSLRLQAFTTFILWGAPSLISVVTFVTCMLMGVKLTAGAVLSALATFQMLQSPIFGLPDLLSALVQSKVSADRIASYLQQSETQKDAVEYCSKDHTELSVEIENGAFSWEPESSRPTLDDIELKVKSGMKVAVCGAVGSGKSSLLSSILGEIQKLKGTVRVSGKQAYVPQSPWILSGTIRDNILFGSMYESEKYERTVKACALIKDFELFSNGDLTEIGERGINMSGGQKQRIQIARAVYQNADIYLLDDPFSAVDAHTGRELFEDCLMGILKDKTVLYVTHQVEFLPAADLILVMQNGRVMQAGKFEELLKQNIGFEVLVGAHNEALDSILSIEKSSRNFKEGSKDDTASIAESLQTHCDSEHNISTENKKKEAKLVQDEETEKGVIGKEVYLAYLTTVKGGLLVPFIILAQSCFQMLQIASNYWMAWTAPPTAESIPKLGMGRILLVYALLAAGSSLCVLARTILVAIGGLSTAETFFSRMLCSIFRAPMSFFDSTPTGRILNRASTDQSVLDLEMAVKLGWCAFSIIQIVGTIFVMSQVAWQVCVIFIPVAVACVFYQRYYTPTARELSRMSGVERAPILHHFAESLAGATTIRAFDQRDRFISSNLVLIDSHSRPWFHVASAMEWLSFRLNLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNICNAENKMISVERILQYSKIPSEAPLVIDGHRPLDNWPNVGSIVFRDLQVRYAEHFPAVLKNITCEFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSQGTIVIDNVDITKIGLHDLRSRLGIIPQDPALFDGTIRLNLDPLAQYTDHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEYSLRSNHFAGSNDLLS
What is the function of this protein?
Pump for glutathione S-conjugates.
What are the official names of this protein?
ABC transporter C family member 9, ABC transporter ABCC.9, AtABCC9, ATP-energized glutathione S-conjugate pump 9, Glutathione S-conjugate-transporting ATPase 9, Multidrug resistance-associated protein 9.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: CCMA_YERPS
Sequence: MLEAKNLTCIRDDRCLFQQLSFCIAPGEIVQIEGPNGAGKTSLLRILAGLAEADEGQVNWRDNNIRRDRAKYHQDLLFLGHQPGIKSVLTPFENLLFYQSVFQKVDSAAIWQALAQVGLVGYEDLPVSQLSAGQQRRVALARLWLSPAPLWILDEPLTAIDKQGVSTLLALFVQHAAKGGMVLLTTHQDLGAVSHNVRKICLANTQEKSCLSACCAVN
What is the function of this protein?
Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Cytochrome c biogenesis ATP-binding export protein CcmA, Heme exporter protein A.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: PPK5_DERIN
Sequence: GGGGSGETSGMWFGPRL
What is the function of this protein?
Myoactive.
What are the official names of this protein?
Pyrokinin-5, DerIn-Capa-PK, FXPRL-amide.
What is the protein family that this protein belongs to?
Belongs to the pyrokinin family.
What are the subcellular locations of this protein?
Secreted.
Protein: ILVD_LEIXX
Sequence: MPQIDWKPRSRVVTDGIEATTSRGMLRAVGMGDADWEKPQIGIASSWNEITPCNLSLDRLAQGAKEGVHSGGGYPLQFGTVSVSDGISMGHEGMHFSLVSREVIADSVETVMMAERLDGTVLLAGCDKSLPGMLMAAARLDLSAIFLYAGSIAPGWVKLSDGTEKDVTIIDSFEAVGACKAGKMSEEDLKRIECAIAPGEGACGGMYTANTMASVAEALGMSLPGSAAPPSADRRRDSFAHRSGEAVVSLLKQGITARDILTKKAFENAIAVAMAFGGSTNVVLHLLAIAREAEVDLTIDDFNRIGETVPHIGDLKPFGTYVMNDVDRHGGVPVVMKALLDAGLLHGDCLTVTGKTVAENLAEIDPPAPDGTVLRSLDNPIHPTGGLTILKGTLAPEGAVVKTAGFDAEVFEGPARVFERERAAMDALTAGRINAGDVVVICYEGPKGGPGMREMLAITATIKGAGLGKDVLLLTDGRFSGGTTGLCIGHIAPEAVDAGPIAFVRDGDLIRVDIAARSLDLLVDESELTARRDGWAPLPPRYTRGVLAKYSKLVRSAAEGAVTG
What is the function of this protein?
Functions in the biosynthesis of branched-chain amino acids.  Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
What are the official names of this protein?
Dihydroxy-acid dehydratase, DAD.
What is the protein family that this protein belongs to?
Belongs to the IlvD/Edd family.
Protein: DNAG_HALMA
Sequence: MQDTAKYLIHADITAAGVVERSDVVGAVFGQTEGLLGDELDLRDLQDSKKVGRIDVEIRSEGGQSFGEITVASGLDRVETAILAAALETIEQVGPCRAEIEVSEIEDVRSAKRREVVERATELLNDFEEKSIQTADIVETVRQQVRVADVTDYEGLPAGPRVADSDAIVVVEGRSDVMQLLKYGIKNAVAVEGTDVPDAIADLTAGRTVTSFLDGDRGGDLILKELAQVGDVDYVAVTPSDKSVEDLSRSEVMSALRDKVPYETVASAKSLDSIREEMSQAGESTTADGGAVAAATSDDAADNQPSPSSQTGSAKVETTDGTTSVVDNSNATAVADATTDEETTENGDGPTIPSLSDHIEAVIQTHSGTARLVDEDATLLAEGDADAVVSLLESTEDVPKTVVIDADCSQKLLDVAAQRGVDVVVAAGHGEYVKQPTAVQVRIES
What is the function of this protein?
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
What are the official names of this protein?
DNA primase DnaG.
What is the protein family that this protein belongs to?
Belongs to the archaeal DnaG primase family.
Protein: PSBM_ACOCL
Sequence: MEVNILAFIATALFILVPTAFLLIIYVKTVSQND
What is the function of this protein?
One of the components of the core complex of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.  This subunit is found at the monomer-monomer interface.
What are the official names of this protein?
Photosystem II reaction center protein M, PSII-M.
What is the protein family that this protein belongs to?
Belongs to the PsbM family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: HRCA_PHYMT
Sequence: MLSNRKKIILKSIIENYSKEAKPVSSKLLTYTLHLNVSSATIRADMAELEKQGYLLKKNYNSSGRIPSFKGYNYYLNNLIKRNEEFIEMFSFVDKIIQKKSFTKEQLIKKVLELLSEFTSYTAIAIGSDILKTSKINKIDLIYLNYFELIILIVTDKGHVQHQNIVLNQKKDVNMLDIKKVIIILNDLLKGKFLFEATLIIQSDIVKKTIGKYINCEEQFIESFVEIFANFVDNNCYLSGVLNILNQPEFNNIEIIKKLINCLTKKELIKIMTIKKRLTFKFSDNIELIQLENFTIISIPYSINKYEKGQIAILGPYRMNYHKVIPLLEYLSVYLSNLYDLNN
What is the function of this protein?
Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons).  Prevents heat-shock induction of these operons.
What are the official names of this protein?
Heat-inducible transcription repressor HrcA.
What is the protein family that this protein belongs to?
Belongs to the HrcA family.
Protein: CYVA_LEOCM
Sequence: GVIPCGESCVFIPCISAAIGCSCKNKVCYRN
What is the function of this protein?
Probably participates in a plant defense mechanism.  Has anti-HIV activity.
What are the official names of this protein?
Cycloviolin-A.
What is the protein family that this protein belongs to?
Belongs to the cyclotide family. Bracelet subfamily.
Protein: BIK2_GIBF5
Sequence: MAEPNQHYEVIIAGGGIAGVTLALMFEKLDISYFLLEGRDTLESDRGAGIGLQPNGLRILDQLGLVEDIEEATIPLEKWFSYDSEGNLMNDSDAMGQYRDKIGYPVAFIERRKLLPIMVRHIQRTECVKTSARVASIEESEDHVTVTTTDGLSLTADIVVGADGVRSAVRTHIDSKLPEPLTADDYISVACSTVYGMSAPTEGIAPGERFAVYRENQTVIGFTGKDGIVFWFVFENLNRNVPLSQAPRYTEAEAEALCLSVAHTQVTPKLKFGEIYKNSVVAVKIGVEEGVAKGWHTDRAVIVGDAACKTTPAGGQGANQAIESCAVFVNKLMAARKASQSGDKLSSDVVKSVLASYAQERAQPATTALERSQMVGKALLCTPGPATTLVKDMLKLSNEDWLLRAFMALSAAPYLEDVELTARGHLYNKAVEEARAEMARRQRVAKEVKEAEEKESKQAASIKESEQRNEFVGLRNPVQAATGVVEVGS
What is the function of this protein?
FAD-dependent monooxygenase; part of the gene cluster that mediates the biosynthesis of bikaverin, a red pigment also considered as a mycotoxin (PubMed:19400779).  The first stage is catalyzed by the polyketide synthase bik1, which catalyzes the formation of the intermediate SMA76a also knowm as pre-bikaverin (PubMed:19400779).  FAD-dependent monooxygenase bik2 might then be responsible for the oxidation of pre-bikaverin to oxo-pre-bikaverin which is in turn methylated by the O-methyltransferase bik3 to me-oxo-pre-bikaverin (PubMed:26382642).  A further cycle of oxydation and methylation by bik2 and bik3 leads to the final product of bikaverin, via a nor-bikaverin intermediate (PubMed:19400779, PubMed:26382642).
What are the official names of this protein?
FAD-dependent monooxygenase bik2, Bikaverin biosynthesis protein 2.
What is the protein family that this protein belongs to?
Belongs to the paxM FAD-dependent monooxygenase family.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.
Protein: MYCT_MOUSE
Sequence: MSRKASEDVEYTLRSLSSLMGERRRRQPEPGAPGGERSLLAAESAASLQGAELERAARRQFQRDETPAFVYAAAAFSALGGFLFGYDTGVVSGAMLLLRRQMRLGAMWQELLVSGAVGAAAVAALAGGALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAIPAVIQFLGFLFLPESPRWLIQKGQTQKARRILSQMRGNQTIDEEYDSIRNSIEEEEKEATAAGPIICRMLSYPPTRRALVVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALGFLLSAQVSPRVTFRPTTPSDQNTTCTGYSYCNECMLDPDCGFCYKINGSAVIDSSCVPVNKASTTEAAWGRCDNETKFKAEGAHWAYSFCPTPYSWTALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVSLTFLHTAEYLTYYGAFFLYAGFAAVGLLFVYGCLPETKGKKLEEIESLFDHRLCSCGAADSDEGRYIEYIRVKGSNYHLSDNDASDVE
What is the function of this protein?
H(+)-myo-inositol cotransporter.  Can also transport related stereoisomers.
What are the official names of this protein?
Proton myo-inositol cotransporter, H(+)-myo-inositol cotransporter, Hmit, H(+)-myo-inositol symporter, Solute carrier family 2 member 13.
What is the protein family that this protein belongs to?
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: TRHO_IDILO
Sequence: MYICAALYKFVELNDYKELREPLYQTLIANDVKGTLLLAREGINGTICGTREAIDNVLNYLRSDERFADIEHKESPSDEQAFYRTKVKLKKEIVTLGVDWVDPKSSVGTYVDPEKWNDLIADPEVLVIDTRNEYEYAVGTFEGAINPKTDTFREFPEYVKQHLDPEKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVYHLKGGILKYLEMMPEDNSRWNGECFVFDQRVTVKHGLEQGEYDQCYACRMPITAEEMQSEHYQKGVSCPHCYDKTSTEQKERFAERERQIQLAKARGEKHIRDGKLESLS
What is the function of this protein?
Catalyzes oxygen-dependent 5-hydroxyuridine (ho5U) modification at position 34 in tRNAs.
What are the official names of this protein?
tRNA uridine(34) hydroxylase, tRNA hydroxylation protein O.
What is the protein family that this protein belongs to?
Belongs to the TrhO family.
Protein: RNPH_AFIC5
Sequence: MRPSGRAPNELRPVSLERGVVKYAEGSCMVKFGDTRVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATHERVRREASAGKQSGRTVEIQRLIGRSLRTTVDLVALGERQITIDCDVIQADGGTRTASITGAWVALADCLQWMKARNMLKNDNVLRDNVAAISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRLVEVQGTAERTPFSQEEFLQLMALAQNGIGRLVELQKIAMA
What is the function of this protein?
Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation.  Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important.  Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
What are the official names of this protein?
Ribonuclease PH, RNase PH, tRNA nucleotidyltransferase.
What is the protein family that this protein belongs to?
Belongs to the RNase PH family.
Protein: TORD_ECOLU
Sequence: MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNR
What is the function of this protein?
Involved in the biogenesis of TorA.  Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor.
What are the official names of this protein?
Chaperone protein TorD.
What is the protein family that this protein belongs to?
Belongs to the TorD/DmsD family. TorD subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL36_FLAJ1
Sequence: MKVRASVKKRSAECIIVRRKGRLYVINKKNPRFKQRQG
What are the official names of this protein?
50S ribosomal protein L36.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL36 family.
Protein: RL10_THISH
Sequence: MPLNLEDKKAIVSEVAAVAASAHSAVAAEYRGLTVTEMTELRAKARQSNVYLRVVKNSLARRAVEGTDFACMQEGLVGPLVLAFSQDDPGAAARLVKDFAKEHKKLEVKLVSVGGQLLGPGELERLASMPTRDQAISLLMAVMKAPLDKFARTLNEVPGKLVRTVAAIRDQKQASA
What is the function of this protein?
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
What are the official names of this protein?
50S ribosomal protein L10.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL10 family.
Protein: Y864_GEOKA
Sequence: MKYGIVIFPPKRIQDFANSYRKRYDSHYALIPPHITLKYPFEADEEQIKKMAKELRRIAAETPPIPIKVTKFSSFYPTSNIIYLKVEPNDVLERLHEQLHSGLFAGKPEFVFVPHITIGRDLPGAEYADVYSQLKLQDVHFEETVDRFHLLYQLENGSWTVYETFIVGGKETV
What are the official names of this protein?
Putative phosphoesterase GK0864.
What is the protein family that this protein belongs to?
Belongs to the 2H phosphoesterase superfamily. YjcG family.
Protein: TMM50_DICDI
Sequence: MRKTIMKYLPALAGIIFTAGWFLWIDGHVYENTNNKNADFDGPHIQWIYYLPGIFATLGMVMANIVDLSALNSNSLLFDGGATKVRVWLFISFAISFGCIGAALWIMVAVFLPPHNTNDAAQWPGIAITLQTSLIFLSSLLLVFKKVRQDDEYDQF
What are the official names of this protein?
Transmembrane protein 50 homolog.
What is the protein family that this protein belongs to?
Belongs to the UPF0220 family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.