PharMolix/UniProtQA huggingface dataset:
Protein: Y1303_ARCFU
Sequence: MKRAKKFKDYFEDIKPVTDEELEELLNEPPRRRNRGNFKKAKKEFYRDF
What are the official names of this protein?
Uncharacterized protein AF_1303.
Protein: TRPC_CHLL3
Sequence: MTYLAKILKEKRREVAAIKAERPLARYLELRSSLAPARGFQEALRGEDGRLRLIAEVKKASPSRGVIVHDFDPVRIALHYEEIGASALSVLTDRQFFQGSPDYLRAVSAAVRLPVLRKDFIVDESQIFESRLMGADAILLIVAALEPRQLRDYLQTASETGLDVLVEVHDRRELDTAAEEGATMIGVNNRNLKDFSVDPATSSDLRPFFPPDTIAVSESGLKTAGDIAHLRDAGFHAVLIGEGLQTSKELTGLTWPVSHSLS
What are the official names of this protein?
Indole-3-glycerol phosphate synthase, IGPS.
What is the protein family that this protein belongs to?
Belongs to the TrpC family.
Protein: VG03_ICHVA
Sequence: MAFSTSDEKRIAELLGMSPATLSVRVFGVDLPHDPIPWDSDDEGDDTMPTGSWSERALGVETVARPHVYIGPVGIGAVDDETSDWDSPASPPVTGAERAAGGLPRQAPLLVRRVSGNEWRVVSESERRIEEIGRELARICEIQWDEDVAGAPVGTVTGNSPWSPVRGSLLPPKSGSPTYWNPPPPSPSDDTTCEIPSLPSSLVSSPVNPAPMYSPVSDAPLNTPSPNMMITPTHPGLARLLDTPPTPLDADLGDWAVDWLYAPQLGDQLRIESGSSPGKRPLDDPDEVPSSKRGPSRRALLN
What are the official names of this protein?
Uncharacterized protein ORF3.
Protein: YRA2_ASHGO
Sequence: MSVDEHLNQGTGEKQYRRRDLRNGLASRMGLGESTYRAREYGPSRRSRFRDRRDARPPPPTHQRVRFLNIPLDVSDYEIDDLLKDLPKPLYSKFYDHEDSRSAVFEFEDHSILDKCVELYNGLELHGAKITVEIFEQQGRFADSTRTNRSTDHVEKEAGFKTGRPRGKARATKKEKPPQPTLEDLDAELDAYMNGN
What is the function of this protein?
Involved in export of poly(A) mRNAs from the nucleus.  Recruited to the coding sequences as well as poly-A sites of active genes (By similarity).
What are the official names of this protein?
RNA annealing protein YRA2.
What is the protein family that this protein belongs to?
Belongs to the YRA1 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: DTX31_ARATH
Sequence: MEKDNDFKDPFLASTEEEELDPATQKALMEYLGVGSRASSLVSFSSTAVDIPPISGVGDFVREFRIESRKLWKLAGPAIFTTMSQYSLGAVTQVFAGHISTLALAAVSIENSVIAGFSFGIMLGMGSALETLCGQAFGAGKVSMLGVYLQRSWVILSVTALFLSLIYIFAAPILTFIGQTAAISAMAGIFSIYMIPQIFAYAINFPTAKFLQSQSKIMVMAGISGVVLVIHSFFTWLVMSRLHWGLPGLALVLNTSWWVIVVAQLVYIFNCTCGEAWSGFTWEAFHNLWGFVKLSLASAAMLCLEIWYFMALVLFAGYLKNAEVSVAALSICMNILGWAAMVAFGTNAAVSVRVSNELGASHPRTAKFSLVVAVILSTAIGMFIAAGLLFFRNEYPVLFVEDEEVRNVVRELTPMLAFCIVINNVQPVLSGVAVGAGWQAVVAYVNIACYYLFGVPFGLLLGFKLEYGVMGIWWGMVTGTFVQSIVLTWMICKTNWEKEASMAEERIKEWGGVPAEKETLLN
What is the function of this protein?
Positively mediates root hair elongation.
What are the official names of this protein?
Protein DETOXIFICATION 31, AtDTX31, Multidrug and toxic compound extrusion protein 31, MATE protein 31, Protein ROOT HAIR SPECIFIC 2.
What is the protein family that this protein belongs to?
Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: DCYD1_ARATH
Sequence: MRGRSLTLSRVKLELARRSMSATSVPSMADFLTKKPYSPPSWASHLRPLPSHTFSLAHLPTPIHRWNLPGLPNGTELWIKRDDFTGMELSGNKVRKLEFLMAEAVDQHADTVITIGGIQSNHCRATATASNYLNLNSHLILRTSKLLADEDPGLVGNLLVERLVGANVHLISKEEYSSIGSEALTNALKEKLEKEGKKPYVIPVGGSNSLGTWGYIEAAREIEEQLNYRPDDLKFDDIVVACGSGGTIAGISLGSWLGALKAKVHAFSVCDDPDYFYDFVQGLLDGLHAGVNSRDIVNIHNAKGKGYAMNTSEELEFVKKVASSTGVILDPVYSGKAAYGLINEITKDPKCWEGRKILFIHTGGLLGLYDKVDQMASLMGNWSRMDVSESVPRKDGVGKMF
What is the function of this protein?
Possesses 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity.  Acts as a regulator of ACC levels and causes changes in ethylene levels.
What are the official names of this protein?
Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial, 1-aminocyclopropane-1-carboxylic acid deaminase 1, AtACD1, AtD-CDes1, D-CDes1, D-CDES.
What is the protein family that this protein belongs to?
Belongs to the ACC deaminase/D-cysteine desulfhydrase family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: TSAD_THESQ
Sequence: MRVLGIETSCDETAVAVLDNGKNVVVNFTVSQIEIHQKFGGVVPEVAARHHLKNLPILLKKAFEKVPPETVDVVAATYGPGLIGALLVGLSAAKGLAISLEKPFVGVNHVEAHVQAVFLANPDLKPPLVVLMVSGGHTQLMKVNEDYSMEVLGETLDDSAGEAFDKVARLLGLGYPGGPVIDRVAKKGDPEKYSFPRPMLDDDSYNFSFAGLKTSVLYFLQREKDYKVEDVAASFQKAVVDILVEKTFRLARNLGIRKIAFVGGVAANSMLREEVRKRAERWNYEVFFPPLELCTDNALMVAKAGYEKAKRGMFSPLNLNADPNLNV
What is the function of this protein?
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.  Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB.  TsaD likely plays a direct catalytic role in this reaction.
What are the official names of this protein?
tRNA N6-adenosine threonylcarbamoyltransferase, N6-L-threonylcarbamoyladenine synthase, t(6)A synthase, t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD, tRNA threonylcarbamoyladenosine biosynthesis protein TsaD.
What is the protein family that this protein belongs to?
Belongs to the KAE1 / TsaD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL3_CITBB
Sequence: MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGFGAKDASRANAAQVGHCKGAGAGVFTHYRELRMDNTDAYKLGDVIEAAVFEEGDLVDVTGTSIGKGFAGVIKRWGFKGGRSSHGSRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVVRVDAADNLILLGGAIPGSANGVVLIKDSVKAKK
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
What are the official names of this protein?
50S ribosomal protein L3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL3 family.
Protein: ENGB_PSET1
Sequence: MLKSRIKYNTASFVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQKLARTSKTPGRTQLINTFELADVDDMRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVILMDIRHPLKDLDRDLINWAISSEIPVLALLTKADKFKQGPRQSQVLKVRRELSALDGDITVHAFSSLKGTGLPDVAKKLDEWFLGPVVAVPPAEKILNDDTNPTS
What is the function of this protein?
Necessary for normal cell division and for the maintenance of normal septation.
What are the official names of this protein?
Probable GTP-binding protein EngB.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
Protein: ASTA_ECOK1
Sequence: MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSVRIERAIKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPKWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTYFLSQEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEVAEGQPAQGDFPACLVANENYHHFRVVLVRTDPATERLILTAAQLDVLKCHAGDRVRLVRLCAEEKTA
What is the function of this protein?
Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.
What are the official names of this protein?
Arginine N-succinyltransferase, AST, AOST.
What is the protein family that this protein belongs to?
Belongs to the arginine N-succinyltransferase family.
Protein: SRB8_COCIM
Sequence: MASLNTPECPVMSSRPSMSCGNSSSSGLAIQGHSQRPSQTDPSAVEQAAQDSVIDLTNSDYETCDANRATKRQKLDLRIDVPNTQRAPKARFSQAVSSPFALQDTVPPIRTGRPFWDFGEEVSGFGFQGSLESEIPNDEPEQPDSLPPLPVRPWRYRPQGHSSREETPRVNQNAGAEVQTTPFCIEVPEAAPIFDSGKPLDFYPWKGDHPEDSLTDQTAKQGYYDRVQVSQNESNTARPSLYVQLKHRSGLKLLSSVFTAAIDKRQSHCRVTGFSTFKPPPRVTLTDIKRETWLRDLANPSVPLRRLSRTIPHGIRGRILLDQCVNKAIPIGRAVWLVKCVGANEIRAFKRKGTSAAITHSLEVKWVRDWSINVHQFIESVVTACGTPNWASTMSYVIRFAARLFQEQLLDQALCLDWFLQSLRTAPIGTLPIWLSMLGAYWTSLVRYRKRGRPLAESLLEKLKTILSLEDSGPKKQIADRLSWLIKTFAESHPACFVLPLTWRTYKSTLTTCFCLHLSEDNRKIGALSNRNERIVKAEICRQSGRQSPSQQVICLLDSADSLNDMEILSSGCLNLHFDHGSLIMKILEWVSTSFRRGSARVYVAVRLLRKWRRAGMDTDNCIVNFLQQKADTPGFSPANIYHLVCELVRSQSFAVGKYLQWLMARGAVRNDAPMHPTVQLLAHLPRRKLPSHVWNLRNTLLTKAGFLLSSENQQILNTKRYIHHRLPEVITKPIAGDNEGLFTPSDLSNLNWTIKSEIGHWIREHVSLHRKRYLRTAPNHHNACAIEISALTPAQFFEIRDIIECLGDLSLLADILKHTSSSDNIIVLISAVDTLNYCADSFKAIGALSDLFKSALAGYAHVNKADVSIIELISSLLEVGMKLPGEIPVVAMLRRDLSHFDKKFTGAVSSPVSDHTGESVNIASPAFSEGLHQLLNSGSGMDEPNMNKIFDMLSRKLKQSKEPNASSHEIARHLSQLRVLNSDVFDRLMVKWIISTLKSSPRPHLLTFLPPLIGVGCVTFEAFFALIDRLLKSDSHRQSIQDVSGLRYEMINLLRKEIFYELGSIDLVSYRFKTTREEYITHHAYDALGLVNEALANVNPESTSNPPLVPLLCELIIQNLNAFGPEGAGRIVEEFPNCVDIIHQALDVLLGLKAQVGVQKTQSVVGLIDDLSLSYCLVKLRLLLDANPDGDAARSSIVDLLFRTAESDIRNGERRWLEVLNVLPVSAAHLIRQRAEREILSLSLISSSLTTFSSEEDALIYLCIVEELSYSIPDEFSPSSMGADLGDKMFLLLQKTVELANAKKGTDLESGASSTALGVAELSIGVWFFVLLRLVALHRSLVPPNCDSRTEINHQTRLLVQICCISRSPLFARRSTQSFISSISTFTKCDSLLRMLPSSWANLQLQALDVCSTLVDTLSDEARYECARFLRDKCPAFLHPQNDARLLFLFGPIIESQSITTHGSSRASTSTPVTNLTQHVQSTPPPSQNTLTPGMVEEPNLFTNKLRFQQNGRITGPYPPKPWEMLGDAAPIIGINDTPVNLAYFGTRQSKRL
What is the function of this protein?
Component of the SRB8-11 complex.  The SRB8-11 complex is a regulatory module of the Mediator complex which is itself involved in regulation of basal and activated RNA polymerase II-dependent transcription.  The SRB8-11 complex may be involved in the transcriptional repression of a subset of genes regulated by Mediator.  It may inhibit the association of the Mediator complex with RNA polymerase II to form the holoenzyme complex (By similarity).
What are the official names of this protein?
Mediator of RNA polymerase II transcription subunit 12, Mediator complex subunit 12.
What is the protein family that this protein belongs to?
Belongs to the Mediator complex subunit 12 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: PSBN_AGARO
Sequence: METATLVAISISRLLVSFTGYALYTAFGQPSEQLRDPFEEHED
What is the function of this protein?
May play a role in photosystem I and II biogenesis.
What are the official names of this protein?
Protein PsbN.
What is the protein family that this protein belongs to?
Belongs to the PsbN family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: DOHH_ASPNC
Sequence: MSAVNENNLEGVSETVLTLRKVVVNESEPLARRFRALFSLKYLACLQPPSEDTLPAIEAIAAAFSSKSALLKHELAYCLGQTRNPDAVAFLQQVLKDKEEDVMCRHEAAEALGALGYEDSLEILKALKDDENEPEVIRETCDIAVDRIVWENSEARKAEKLKPSDFTSIDPAPPMPLEAAEPSIPELEKTLLDTKLPLFQRYRAMFALRDLASPPDLPTAVQAVDALAKGLKDPSALFRHEVAFVFGQLCHPASVPSLTECLSNQEEAGMVRHEAAEALGSLGDVEGVEDTLKKFLNDPEQVVRDSIIVALDMAEFEKNGEMEYALVPDSGAPAAVSA
What is the function of this protein?
Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L-lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
What are the official names of this protein?
Deoxyhypusine hydroxylase, DOHH, Deoxyhypusine dioxygenase, Deoxyhypusine monooxygenase.
What is the protein family that this protein belongs to?
Belongs to the deoxyhypusine hydroxylase family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: YACG_METC4
Sequence: MSQSVKRTAADKPLAPCPICGKPARTETKPFCSPRCADIDLGRWLGERYVIPGPEEDEMSYPPHSNDGNRSR
What is the function of this protein?
Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA.  Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
What are the official names of this protein?
DNA gyrase inhibitor YacG.
What is the protein family that this protein belongs to?
Belongs to the DNA gyrase inhibitor YacG family.
Protein: RDRP_I80A4
Sequence: MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEEIEITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRVNKRSYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSFTITGDNTKWNENQNPRMFLAMITYITKNQPEWFRNILSIAPIMFSNKMARLGKGYMFESKRMKLRTQIPAEMLASIDLKYFNESTRKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLGPATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWEQTQSKAGLLVSDGGPNLYNIRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFSEIMKICSTIEELRRQK
What is the function of this protein?
RNA-dependent RNA polymerase which is responsible for replication and transcription of virus RNA segments.  The transcription of viral mRNAs occurs by a unique mechanism called cap-snatching.  5' methylated caps of cellular mRNAs are cleaved after 10-13 nucleotides by PA.  In turn, these short capped RNAs are used as primers by PB1 for transcription of viral mRNAs.  During virus replication, PB1 initiates RNA synthesis and copy vRNA into complementary RNA (cRNA) which in turn serves as a template for the production of more vRNAs.
What are the official names of this protein?
RNA-directed RNA polymerase catalytic subunit, Polymerase basic protein 1, PB1, RNA-directed RNA polymerase subunit P1.
What is the protein family that this protein belongs to?
Belongs to the influenza viruses polymerase PB1 family.
What are the subcellular locations of this protein?
Host nucleus. Host cytoplasm.
Protein: O236D_CONTE
Sequence: MQKLIILLLVAAVLMSTQAVLQEKRPKEKIKFLSKRKTDAEKQQKRLCPDYTDPCSHAHECCSWNCYNGHCTG
What are the official names of this protein?
Conotoxin Asp7/Gla(3)-TxVI, Conotoxin TxMEKL-0421.
What is the protein family that this protein belongs to?
Belongs to the conotoxin O2 superfamily.
What are the subcellular locations of this protein?
Secreted.
Protein: DRDI_PETMO
Sequence: MTVVPVKLNELKNKLVIIDQTLLPNEEKFLELDNPEEIWEAIKKLRVRGAPAIGIAAAFGLYVSTLKSKAANVAQFKKEFEEVRDYFATSRPTAVNLFWALKRMTRRFEQEEDKTVDKIKQALLDESEKIFAEDQEMSKAIGKHGLSLLKPGMGLLTHCNAGGLASSGYGTALAPIYLGHEKGYNFKVYADETRPLLQGARLTTYELYKAGIDVTLICDDMASLVMKEGKIDAVLVGCDRVAANGDTANKIGTSGLAVLAKEYGIPMYILGPTSTIDLDASTGEDIKIELRDEEEVVNGFGRRTALKGVKAYNPAFDVTDAKYITAIITEKGIVMQPYKESLKKLFE
What is the function of this protein?
Catalyzes the isomerization of 5-deoxy-alpha-D-ribose 1-phosphate to 5-deoxy-D-ribulose 1-phosphate, as part of a 5-deoxyribose salvage pathway that recycles this toxic radical SAM enzyme by-product to mainstream metabolites.
What are the official names of this protein?
5-deoxyribose 1-phosphate isomerase.
What is the protein family that this protein belongs to?
Belongs to the EIF-2B alpha/beta/delta subunits family. DrdI subfamily.
Protein: T2B1_GEOSE
Sequence: MNTQKPFENHLKSVDDLKTTYEEYRAGFIAFALEKNKRSTPYIERARALKVAASVAKTPKDLLYLEDIQDALLYASGISDKAKKFLTEDDKKESINNLIENFLEPAGEEFIDELIFRYLLFQGDSLGGTMRNIAGALAQQKLTRAIISALDIANIPYKWLDSRDKKYTNWMDKPEDDYELETFAKGISWTINGKHRTLMYNITVPLVKKNVDICLFNCEPEIYTPQKVHQQPEKYLLLGELKGGIDPAGADEHWKTANTALTRIRNKFSEKGLSPKTIFIGAAIEHSMAEEIWDQLQSGSLTNSANLTKTEQVGSLCRWIINI
What is the function of this protein?
A P subtype restriction enzyme that recognizes the double-stranded sequence 5'-CYCGRG-3' and cleaves after C-1.
What are the official names of this protein?
Type II restriction enzyme BsoBI, R.BsoBI, Endonuclease BsoBI, Type-2 restriction enzyme BsoBI.
Protein: CASP2_RICCO
Sequence: MMKSDSVAIDVPESSSVAKRKAPFMANIRDENGGYKKGLAIFDFILRLGAIAAALGAASTMGTSDETLPFFTQFFQFNAGYDDFPTFQFFVIAMAMVAGYLVLSLPFSIVSICRPHAAGPRILLFILDTVALTLNAAAGAAAADIVYLAHNGNQTTNWLAICLQFGDFCREVSGSVVASFASVVILMVLVVMSGLALRRY
What is the function of this protein?
Regulates membrane-cell wall junctions and localized cell wall deposition.  Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity).
What are the official names of this protein?
Casparian strip membrane protein 2, RcCASP2.
What is the protein family that this protein belongs to?
Belongs to the Casparian strip membrane proteins (CASP) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein. Note=Very restricted localization following a belt shape within the plasma membrane which coincides with the position of the Casparian strip membrane domain in the root endodermis.
Protein: EX7L_NOCSJ
Sequence: MALESSLESPAPVRQIANAIAGWVDRLGAVWVEGQVAQVSRRPGLNTVFLTLRDAVADISVPVTCSRTLFDGLNPPLVEGASVVLHAKPSYYANRGTLSLYAREIRMVGLGELLARLERRRQLLAAEGLFAAELKRPLPFLPGTVGLVTAPNSAAERDVLENARRRWPAVAFEIAYAAMQGPRSASEVIEAVERLDRDPAVEVIVVARGGGSVEDLLPFSDEALIRAVHRIRTPLVSAIGHEPDSPLLDLVADVRASTPTDAAKLVVPDVAEEQRNVRRARERARGALARWIAREQAGLDGLRSRPALADPRMLLDARRDEVDQLRDRARRCLGHALDRAADDIGHHRARARALSPLATLQRGYAVLQDADGHVVTSVGAVAPKQQVSVRVADGRIHATTTSTEELDVQEG
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 large subunit, Exodeoxyribonuclease VII large subunit, Exonuclease VII large subunit.
What is the protein family that this protein belongs to?
Belongs to the XseA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUVC_HELPH
Sequence: MRILGIDPGSRKCGYAIISHASNKLSLITAGFINITTTRLQEQILDLIEALDCLLDRYEVNEVAIEDIFFGYNPKSVIKLAQFRGALSLKILERIGNFSEYTPLQVKKALTGNGKAAKEQVAFMVKRLLNITSEIKPLDISDAIAVAITHAQRLKLH
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair.  Endonuclease that resolves HJ intermediates.  Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction.  The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'.  Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange.  HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Crossover junction endodeoxyribonuclease RuvC, Holliday junction nuclease RuvC, Holliday junction resolvase RuvC.
What is the protein family that this protein belongs to?
Belongs to the RuvC family.
Protein: NIKR2_METMA
Sequence: METELMRIGVSLPDTLLSKFDEIIEKRGYSSRSEGIRDAIRSYISYYEWMGDIKGHRVGTVAVIYDHTKRGLSNALADIQHHYSHLIKSSVHIHLDHDNCFEVVVLDGDGEEIKELAEAIMSLKGVKFSKLTTVASNEKI
What is the function of this protein?
Transcriptional regulator.
What are the official names of this protein?
Putative nickel-responsive regulator 2.
What is the protein family that this protein belongs to?
Belongs to the transcriptional regulatory CopG/NikR family.
Protein: PP393_ARATH
Sequence: MSRGQSYLISFFRNRTRKNPNTQIRSLTVESRDCESKPDEQKSAVSYTEMAKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNLEIV
What are the official names of this protein?
Pentatricopeptide repeat-containing protein At5g18950.
What is the protein family that this protein belongs to?
Belongs to the PPR family. P subfamily.
Protein: VE1_HPV05
Sequence: MTDPNSKGSTSKEGFGDWCLLEADCSDVENDLGQLFERDTDSDISDLLDDTELEQGNSLELFHQQECEQSEEQLQKLKRKYLSPKAVAQLSPRLESISLSPQQKSKRRLFAEQDSGLELTLNNEAEDVTPEVEVPAIDSRPDDEGGSGDVDIHYTALLRSSNKKATLMAKFKESFGVGFNELTRQFKSHKTCCKDWVVSVYAVHDDLFESSKQLLQQHCDYIWVRGIGAMSLYLLCFKAGKNRGTVHKLITSMLNVHEQQILSEPPKLRNTAAALFWYKGCMGSGAFSHGPYPDWIAQQTILGHKSAEASTFDFSAMVQWAFHNHLLDEADIAYQYARLAPEDANAVAWLAHNNQAKFVRECAYMVRFYKKGQMRDMSISEWIYTKINEVEGEGHWSDIVKFIRYQNINFIVFLTALKEFLHSVPKKNCILIYGPPNSGKSSFAMSLIRVLKGRVLSFVNSKSQFWLQPLSECKIALLDDVTDPCWIYMDTYLRNGLDGHYVSLDCKYRAPTQMKFPPLLLTSNINVHGETNYRYLHTTIKGFEFPNPFPMKADNTPQFELTDQSWKSFFTRLWTQLDLSDQEEEGEDGESQRAFQCSARSANEHL
What is the function of this protein?
ATP-dependent DNA helicase required for initiation of viral DNA replication.  It forms a complex with the viral E2 protein.  The E1-E2 complex binds to the replication origin which contains binding sites for both proteins.  During the initial step, a dimer of E1 interacts with a dimer of protein E2 leading to a complex that binds the viral origin of replication with high specificity.  Then, a second dimer of E1 displaces the E2 dimer in an ATP-dependent manner to form the E1 tetramer.  Following this, two E1 monomers are added to each half of the site, which results in the formation of two E1 trimers on the viral ori.  Subsequently, two hexamers will be created.  The double hexamer acts as a bi-directional helicase machinery and unwinds the viral DNA and then recruits the host DNA polymerase to start replication.
What are the official names of this protein?
Replication protein E1, ATP-dependent helicase E1.
What is the protein family that this protein belongs to?
Belongs to the papillomaviridae E1 protein family.
What are the subcellular locations of this protein?
Host nucleus.
Protein: PRS35_BOVIN
Sequence: MGAMFFGLMLFTLGWTLIDGSESEQDFMWHVRKIPRLVSERTFHLTSPAFEADAKMVLNRVCGIECQKDLPAPSLSDLEDSLSYETVFENGSRTLTRVKVQGWVPEPTQNLTSQGAPVRRKRQVYGTDSRFSILDKKFLTNFPFNTAVKLSTGCSGILISPNHVLTAAHCVHDGNGYIKGSKKLRVGLLKMRNKGGGKRRRGSRRNRREVSGAGREGSQDSLKETAKAGRRRKGSARRQRAADGRPSFQWTRVKNTHIPKGWARGESRDPALDYDYALLELKRPHKKKYMELGVSPTIKKLPGGMIHFSGFDQDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLRLKEPDKKRWKRKIIAIYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWMHGDDANCTQG
What are the official names of this protein?
Inactive serine protease 35.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1 family.
What are the subcellular locations of this protein?
Secreted.
Protein: GH36_ARATH
Sequence: MPEAPKIAALEVSDESLAEKNKNKLQFIEDVTTNADDVQRRVLEEILSRNADVEYLKRHGLEGRTDRETFKHIMPVVTYEDIQPEINRIANGDKSQVLCSNPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPYDPYTNYTSPNQTILCSDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIKFLEKHWPELARDIRTGTLSSEITDSSVREAVGEILKPDPKLADFVESECRKTSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPNMAYFEFLPVHRNSGVTSSISLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLSVAGFKNNAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIPGHYVLFWELCLNGNTPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKMVESGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCPKWSPGHKQWGSN
What is the function of this protein?
Catalyzes the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.  Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val.  Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys.  Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA).  The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates (PubMed:15659623).  Involved in auxin signal transduction.  Inhibits shoot and hypocotyl cell elongation, and lateral root cell differentiation in light (PubMed:11169197).
What are the official names of this protein?
Indole-3-acetic acid-amido synthetase GH3.6, Auxin-responsive GH3-like protein 6, AtGH3-6, Protein DWARF IN LIGHT 1, DFL-1.
What is the protein family that this protein belongs to?
Belongs to the IAA-amido conjugating enzyme family.
Protein: APT_ECO57
Sequence: MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH
What is the function of this protein?
Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
What are the official names of this protein?
Adenine phosphoribosyltransferase, APRT.
What is the protein family that this protein belongs to?
Belongs to the purine/pyrimidine phosphoribosyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.