PharMolix/UniProtQA huggingface dataset:
Protein: UL87_SHV21
Sequence: MSMFLLPVYNIPPAKGFLKKVQTRDCNFNIQLKIFCCLATNQVVSSLDFNQLDCIMGHESTFYTCRAVRRLLLGSNWYPFIDTLNESATGTRGPMYNGPGLIINNTDSTYKLTNICSNKYLPIVYSLETTDMPHEPLAYRAIYFPDLEQTPIDYMCMFKIICRYVTMSELEECYEYFLATVSPPFVNTCKKNYLRLVSALKTLPSTVLATPNPPDQLEFFKFSILSFMQEWSLNSLLNTTKKKIIAAVHSHPHIVIKLCSQNAFKEIKITDANFIEMQQTVNHVMPNFHAEITKRDPGSRPLKVSVLLPDGVKWVIYPPSLPIYRVTMCLASVAAVSSDTITSDKQDIRTASALVSIFRKINYAPKDKKKDMVLNSKVALDIFRNYIAQKYTEEDEFMTYRPIHRLGINNFKVNVFNTNMVINTKIFTHSVPWTYKSLMDIPRLTKNFVFKKYSVKEPSFTVSVFYCENMCNGAAININISGDLLTFLHAMGNMKCYMPIKNILPVSLSNWNSTLDLHGLENQSIVRTGRRDVFWTTNFPSAVSTKLGFNVSWFKAATATISKIYGTSLTSHVTKEVSPIISNNSARLSLLKNNLFSVLESRNRSQIQTLHKRMLECLVALCSFLRLDSHTVRRLAQKGMFDFSKKTISHAKNKHDCALLGYKKCNMIPKVLSFNKKTRLDEHGRNANFLAFISATGFHVPKIRAKLIKHVLRTLGLHWRRTYKHVYNTAQ
What are the official names of this protein?
Gene 24 protein.
What is the protein family that this protein belongs to?
Belongs to the herpesviridae UL87 family.
Protein: Y1449_THEPX
Sequence: MSGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGGDPNTNSKLRDAIEKAKANNLPNENIQRAIKKGTGELGGANLEEVIYEGYGPSGTAIIVEALTDNKNRTAGEIRHIFDRHGGSLGAAGSVTWMFDKVGIIIVEKDNSIDEDELAMVAIDAGAQDFSAEDEEFEIITEPSNFQEVKEAIEKAGYKISEAEVTMLPKNTIQLSPEDYEKFEKLIDKLEENDDVQNVYHNVEIEDENDE
What are the official names of this protein?
Probable transcriptional regulatory protein Teth514_1449.
What is the protein family that this protein belongs to?
Belongs to the TACO1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEOD_LEVBA
Sequence: MSNHLEAKMGDIADTVLLPGDPLRAKYIAETFLENPVCYNTVRNAFGYTGTYKGKRISVQGTGMGIPSISIYTNELISEYGVKTLFRVGTSGGMSPDVHVRDVVLAQAASTDSSIIHNTFGGGIYYAAISDFGLLDTAYHVAQDLKISVRVGNVLAEDRFYNDEMDRQKLVDYGVIATEMESTALFMLAAKYHVRALSVLTISNHLMTGESTTPEEREKSFNDMIRVALDTAAKA
What is the function of this protein?
Catalyzes the reversible phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
What are the official names of this protein?
Purine nucleoside phosphorylase DeoD-type, PNP.
What is the protein family that this protein belongs to?
Belongs to the PNP/UDP phosphorylase family.
Protein: SOX15_MOUSE
Sequence: MALTSSSQAETWSLHPRASTASLPLGPQEQEAGGSPGASGGLPLEKVKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKNSSTGSVPFSQEGGGLACGGSHWGPGYTTTQGSRGFGYQPPNYSTAYLPGSYTSSHCRPEAPLPCTFPQSDPRLQGELRPSFSPYLSPDSSTPYNTSLAGAPMPVTHL
What is the function of this protein?
Transcription factor that binds to DNA at the 5'-AACAATG-3' consensus sequence (PubMed:10821863, PubMed:15863505, PubMed:16759287, PubMed:17363903).  Acts as a transcriptional activator and repressor (PubMed:10821863, PubMed:15863505, PubMed:16759287).  Binds synergistically with POU5F1 (OCT3/4) to gene promoters (PubMed:15863505).  Binds to the FOXK1 promoter and recruits FHL3, resulting in transcriptional activation of FOXK1 which leads to myoblast proliferation (PubMed:17363903).  Acts as an inhibitor of myoblast differentiation via transcriptional repression which leads to down-regulation of the muscle-specific genes MYOD and MYOG (PubMed:10821863).  Involved in trophoblast giant cell differentiation via enhancement of HAND1 transcriptional activity (PubMed:16759287).  Regulates transcription of HRC via binding to its proximal enhancer region (PubMed:15863505).  Involved in skeletal muscle regeneration (PubMed:15367664, PubMed:17363903).  Also plays a role in the development of myogenic precursor cells (PubMed:15367664).
What are the official names of this protein?
Protein SOX-15.
What are the subcellular locations of this protein?
Nucleus.
Protein: MNMG_STRT2
Sequence: MSYEFDENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGIVVREIDALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENLTLRQSMVDEILVEDSKVVGVRTATNQKYGAKAVVVTTGTALRGEIIIGDLKYSSGPNNSLASVTLADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLQDQIPCWLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFLEPEGRETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMIRTGYAIEYDIVLPHQLRATLETKLISGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDLVTKGTLEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWNIFKIKKNQFDRELTRLSKEKLKPIKETNEKIQALGFKPLTDAMTAKEFMRRPEIDYATATQFVGPAAEDLDAKVIELLETEIKYEGYINKALDQVAKMKRMEEKKIPENIDWDAIDSIATEARQKFKKINPETIGQASRISGVNPADISILMVYLEGNNKARRKVD
What is the function of this protein?
NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
What are the official names of this protein?
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, Glucose-inhibited division protein A.
What is the protein family that this protein belongs to?
Belongs to the MnmG family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS29_LONON
Sequence: MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD
What are the official names of this protein?
40S ribosomal protein S29.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS14 family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol. Cytoplasm. Rough endoplasmic reticulum. Note=Detected on cytosolic polysomes (By similarity). Detected in ribosomes that are associated with the rough endoplasmic reticulum (By similarity).
Protein: CRYAA_ERIEU
Sequence: MDVTIQHPWFKRALGPFYPSRLLDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVLEDFVEIHGKHSERQDDHGYISREFHRRYRLPPSVDQAALSCSLSADGMLTFSGPKVASGLDAGPSERAIPVSREEKPSSAPSS
What is the function of this protein?
Contributes to the transparency and refractive index of the lens.  Acts as a chaperone, preventing aggregation of various proteins under a wide range of stress conditions.  Required for the correct formation of lens intermediate filaments as part of a complex composed of BFSP1, BFSP2 and CRYAA.
What are the official names of this protein?
Alpha-crystallin A chain.
What is the protein family that this protein belongs to?
Belongs to the small heat shock protein (HSP20) family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Note=Translocates to the nucleus during heat shock and resides in sub-nuclear structures known as SC35 speckles or nuclear splicing speckles.
Protein: VATD_THENN
Sequence: MSVAPTRGNLIALKQQLRLAIQGYDLLERKRTVIMRELVGLIEEAKKLQEELLSTFEEAYRSLQKANLDLGIESVEEYASGIPEFKAMKIIFSSVMGVEVPEIQIERFETEIPYEIYSTNAALDQAYLVFRKALELVARVAVIENKVYRLAHEAKKTKKRVNALENLIIPHLKETIKYIQDTLEELEREELFRLKRLKEKVAR
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.
What are the official names of this protein?
V-type ATP synthase subunit D, V-ATPase subunit D.
What is the protein family that this protein belongs to?
Belongs to the V-ATPase D subunit family.
Protein: RUVC_FRATN
Sequence: MVILGIDPGSRITGFGVIKVQDNKIYYVASGCIRITEITTPKRLKQIADGITQIINIYAPTEAAIEQIFMFQNPMGAIKLGQARGVAMCTLAINNLEVSEYSAKQIKQAVVGTGGAAKSQVQHMVQSLLGLSKKPPEDAADALAIAICHYHSSKSLAKISGASRVSQKRIK
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair.  Endonuclease that resolves HJ intermediates.  Cleaves cruciform DNA by making single-stranded nicks across the HJ at symmetrical positions within the homologous arms, yielding a 5'-phosphate and a 3'-hydroxyl group; requires a central core of homology in the junction.  The consensus cleavage sequence is 5'-(A/T)TT(C/G)-3'.  Cleavage occurs on the 3'-side of the TT dinucleotide at the point of strand exchange.  HJ branch migration catalyzed by RuvA-RuvB allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Crossover junction endodeoxyribonuclease RuvC, Holliday junction nuclease RuvC, Holliday junction resolvase RuvC.
What is the protein family that this protein belongs to?
Belongs to the RuvC family.
Protein: YIHI_YERPS
Sequence: MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVPLVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELGDDEDDVEREEKQEDILQLLKRGNPKDTF
What is the function of this protein?
A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function.  May play a role in ribosome biogenesis.
What are the official names of this protein?
Der GTPase-activating protein YihI.
What is the protein family that this protein belongs to?
Belongs to the YihI family.
Protein: ATPF_LEPBL
Sequence: MILLAAKGLSLLDVNPGLVVWTLITFLVVVLVLKKFAWDVILKALDERAQAVQNDIEKASELRLEAEALLKDYEARLNSAKDEANAIVAEARSDALKLKNKLLEETNQEVKAQKDQAVKEIELAKGKALEQLQTQFVEMTITIAGKVLEKQLKAEDYKAFIETELNKLGKLSA
What is the function of this protein?
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).
What are the official names of this protein?
ATP synthase subunit b, ATP synthase F(0) sector subunit b, ATPase subunit I, F-type ATPase subunit b, F-ATPase subunit b.
What is the protein family that this protein belongs to?
Belongs to the ATPase B chain family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: SSRP_CLOTE
Sequence: MVKGRSNKTLAENRKARHDYFVEEAYEAGIELVGTEVKSIREGKANLKDSYAEIRNGEVFLRNMHVSPYEQGNIFNKDPLRDRKLLLHKMQILKLTAYTTQQGYTLIPLSLYLKNGRVKVNLAVAKGKKNYDKRQDLIEKAAKRDIERELKDRSRY
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: MON1_ARATH
Sequence: MATSDSRSSPSSSDTEFADPNPSSDPETNSERVQSQLESMNLSQPSEVSDGSHTEFSGGGDDNDDEVASANGNEGGVSNGGLLREGVAGTSGGEVLLRAENPVEMEAGEEPPSPTSSGYDGERGSSGGATSTYKADDGSEDEIREANVDGDTASQHEAAWLPGKRHVDEDDASTSWRKRKKHFFILSNSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVNLVKAGNHQVVFLVKGPIYLVCISCTDETYEYLRGQLDLLYGQMILILTKSIDRCFEKNAKFDMTPLLGGTDAVFSSLVHSFSWNPATFLHAYTCLPLPYALRQATGTILQEVCASGVLFSLLMCRHKVVSLAGAQKASLHPDDLLLLSNFVMSSESFRTSESFSPICLPRYNAQAFLHAYVHFFDDDTYVILLTTRSDAFHHLKDCRVRLEAVLLKSNILSVVQRSIAEGGMRVEDVPIDRRRRSSTTNQEQDSPGPDISVGTGGPFGLWHFMYRSIYLDQYISSEFSPPVTSHRQQKSLYRAYQKLYASMHVKGLGPHKTQYRRDENYTLLCWVTPDFELYAAFDPLADKAMAIKICNQVCQRVKDVENEVFLQGASPFSW
What is the function of this protein?
Plays an important role in membrane trafficking through the secretory apparatus.  In complex with CCZ1, acts as a guanine exchange factor (GEF) for RABG3F of the Rab7 protein family.  Promotes the exchange of GDP to GTP, converting RABG3F from an inactive GDP-bound form into an active GTP-bound form.  The RABG3F active form is involved in protein trafficking from prevacuolar compartments (PVCs) to vacuoles.  May serve as a linker between Rab5 and Rab7 protein families in PVCs and mediate PVC maturation.
What are the official names of this protein?
Vacuolar fusion protein MON1 homolog.
What is the protein family that this protein belongs to?
Belongs to the MON1/SAND family.
What are the subcellular locations of this protein?
Endosome. Prevacuolar compartment.
Protein: TAM_MYCSS
Sequence: MWNPEAYLSFADHRGRPFFDLLARVGADAPRRVVDLGCGPGNLTVVLRHRWPEAVVEAWDNSPEMVAAARERGVQANLGDVRGWSPQPDTDVVLSNATLQWVPEHPELLTRWAGALAAGSWLAMQVPGNFDAPSHQAVRRLADREPWAPLLHDIPFRVGKVVETPADYAALLTDAGCSVDAWETTYIHELTDAHPVLEWITGTALRPVRSRLTDEQWDRFRAELIPLLDEAYPVRADGRTFFPFRRVFVVARTG
What is the function of this protein?
Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
What are the official names of this protein?
Trans-aconitate 2-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. Tam family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HIS6_SALAI
Sequence: MSLAVRVIPCLDVDAGRVVKGVNFLDLRDAGDPVELAAAYDRAGADELTFLDVTASASDRGTMVDVVRRTAETVFIPLTVGGGIRRVGDVDTLLRAGADKVGVNTAAIVRPELIAEVADRFGRQVLVLSLDVRRAGPGTTTSGFEVTTHGGRRGTGIDAVDWARRGAELGAGEILLNSMDADGTKTGFDLDLIRAVRSVVDVPVVASGGAGAAGHFPPAIGAGADAVLAASVFHFGELTVGEVKDALRGKGHPVR
What is the function of this protein?
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate.  The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
What are the official names of this protein?
Imidazole glycerol phosphate synthase subunit HisF, IGP synthase cyclase subunit, IGP synthase subunit HisF, ImGP synthase subunit HisF, IGPS subunit HisF.
What is the protein family that this protein belongs to?
Belongs to the HisA/HisF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MTHB_HAEPH
Sequence: MNNPKYPKVNYIGNKEKIAEWICEQLPVDVRTIADVFSGGCSFSFEAKKRGYQVIANDILNINYQLALALIVNNQEILTACDVDFIFSNPPKSGFMTKNYSDVFFFKEECRELDAIRANILKLNNTYKQALAFALMRRAMIRKMPYSRFTISWEKVKQLRDEEYSYSKYGRRRAYHNQSFEFHFRENLNSYNQAVFNNGNIHQAYNEDVFELLDHIQADAVYLDPPYTGTMNNYFGFYGLLDSYMSGEIRQPFDNHFMDKNQAVELFEKLIEKLKPFKYWLLSYNNVSRPNREELTAMLSRNGRKVTVLETPHVYKVTGKENKQKHTELLFLVENR
What is the function of this protein?
An alpha subtype methylase that recognizes the double-stranded sequence 5'-GGTGA-3', probably methylates A-5 on the top strand, and protects the DNA from cleavage by the HphI endonuclease.
What are the official names of this protein?
Type II methyltransferase M2.HphI, M2.HphI, Adenine-specific methyltransferase HphIB, M.HphI(A), Modification methylase HphIB, M.HphIB.
What is the protein family that this protein belongs to?
Belongs to the N(4)/N(6)-methyltransferase family.
Protein: UBIG_SALA4
Sequence: MNTEKPSVAHNVDHNEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYITERSGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIEVEYVQETVEEHAAKHAQQYDVVTCMEMLEHVPDPQSVVHACAQLVKPGGEVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLSWVDETVLKEQHITGLHYNPITNTFKLGPGVDVNYMLHTRAKKA
What is the function of this protein?
O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.
What are the official names of this protein?
Ubiquinone biosynthesis O-methyltransferase, 2-polyprenyl-6-hydroxyphenol methylase, 3-demethylubiquinone 3-O-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
Protein: RPOC1_GUIAB
Sequence: MKQKFSSMIDRYTHQQLRIGLVSPQQISTWSKKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPQFCEQCGVEFVDSRIRRYQMGYIKLAYPVMHVWYLKRLPSYIVNLLDKPLNELEDLVYCGFYFARPIDKKPTFLRLRGLLEYEIQPWKYRIPIFFTTRSFDTFRNREMSTGGGSIRQQLANLDLRMIIDYSLVEWKELEEEEPTGNEWEDRKVGRRKDFLLRRMELAKHFIRTNIEPKWMVLCLLPVLPPELRPIYHIDEDKLVTSDINEIYRRIIYRNNTLTDLLTTSIATPEELIISQEKLLQEAVDALLDNGICGQPMRDDHNRIYKSLSDVIEGKEGRVRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQAFVIRDLIRKHLASNIGVAKSQIRKKKPIVWEILQEILDDHPVLLNRAPTLHRLGIQAFLPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPTIGDPISAPTQDMLSGLYVLTSGNRRGICVNRYNPCNRRNYQNEDNNYKYTKKKEPFFCNAYDAIGAYRQKRIHLGSPLWLRWRLDQRVIAAREAPIEIHYESLGTYYEIYGHYLIVRSIKKEILYIYIRTTLGHIYLYREIEEAIQGFWQGCCNSMLPAGIRVSPG
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta', PEP, Plastid-encoded RNA polymerase subunit beta', RNA polymerase subunit beta'.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: DNLJ_TREPA
Sequence: MSTAQRRVQELEKLILHHQDRYYNAESDISDDAFDALWEELARLDPGNPLLKAIGSDSQRDAVKKRHIVPMGSQHKAADEESFSAWAKKNALQAFLVQHKLDGVSLELQYERGHFCCALTRGNGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVIMHKDIHRSHYPTHANCRNTVNGILKRKDGRGRTHLHIVCYDAVPGTPGKPFTGSLPFADETEKLAWLARQGFVTVHSHRCANAQEVVALRSEIMRTRELLPYSIDGLVVKSTDLDFQDAQLPRPKKQIAFKFSTQEAITTLRDVQWQTSGVTYTPIGITDPVRLAGTTVKRANLCNPNMLTKLCLKIGSHVLISKRGEIIPKIEALVSTPAHAQEIHIPTQCTSCNTVLENSGSRLFCPNVNCPLLSHHRITRWIECLEIKHVGTELIQRLFEEKKVRRIPDLYTLTCEDLIEIEHVGNATAKKILEAIHHKKEIALQTFIAGFGIEGIGETMGEKLICAGFDTLEKVLHATTETLESIYQFGTELAKSVVTGIARVKDDMCELLDRGFVRILAKQQAESPLRGKSFCFSGSLRNGDRATIHRIRALGGVVRTSVTRDLSYLIFESLSQPYRTAQKLKKEQGVALEIISEDEFCRLLDQASASCTHTGETVHPLQGKSFYFSGASRSMNHKHAQEKVRALGGDVASSVTAQLDYLVFYSQSTRYRTACALGIQIISEETLHKLIATAQSPLHTDAHVHAPLHGMSFCFSGDLDGMTRAQAIALVQRLGGTVKTAVSTQLTYLVSNDPHGQSRKCQNAVRCGVRIISEHVFLALCTPGT
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
Protein: MSBA_SHISS
Sequence: MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDNLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAIDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ
What is the function of this protein?
Involved in lipopolysaccharide (LPS) biosynthesis.  Translocates lipid A-core from the inner to the outer leaflet of the inner membrane.  Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
What are the official names of this protein?
ATP-dependent lipid A-core flippase, Lipid A export ATP-binding/permease protein MsbA.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: U79B6_ARATH
Sequence: MGSKFHAFMFPWFGFGHMTAFLHLANKLAEKDHKITFLLPKKARKQLESLNLFPDCIVFQTLTIPSVDGLPDGAETTSDIPISLGSFLASAMDRTRIQVKEAVSVGKPDLIFFDFAHWIPEIAREYGVKSVNFITISAACVAISFVPGRSQDDLGSTPPGYPSSKVLLRGHETNSLSFLSYPFGDGTSFYERIMIGLKNCDVISIRTCQEMEGKFCDFIENQFQRKVLLTGPMLPEPDNSKPLEDQWRQWLSKFDPGSVIYCALGSQIILEKDQFQELCLGMELTGLPFLVAVKPPKGSSTIQEALPKGFEERVKARGVVWGGWVQQPLILAHPSIGCFVSHCGFGSMWEALVNDCQIVFIPHLGEQILNTRLMSEELKVSVEVKREETGWFSKESLSGAVRSVMDRDSELGNWARRNHVKWKESLLRHGLMSGYLNKFVEALEKLVQNINLE
What are the official names of this protein?
UDP-glycosyltransferase 79B6.
What is the protein family that this protein belongs to?
Belongs to the UDP-glycosyltransferase family.
Protein: NAAT1_DROYA
Sequence: MELKGVQPSNGSANGNGTTNAASTEKADTEKQTAERTNWGNGLEFLMSCISVSVGLGNVWRFPFTAYENGGGAFLIPYIIVLFLIGKPMYYLEMIMGQFTSQGTVKIWSVVPGFVGVGYGQAFGTICIISYYSSLLALTLYYLFVSFQSELPWSYCRDEWTNCVNSRPQEYVDNLLTGVSLANESARNLSGIGFVANDETEKLQSSSELYFLNVVIKEKLDISDGVGDPDWKLTLALFVAWVVIFLVIMRGVKSSGKAAYFLALFPYVVLFVLLIRAVTLEGARDGILFFLEPQWGELLNPTVWKEAVVQCFFSLAVGSGPIIMFASYNRFDHGIYRDAMIVTTLDTLTSLLGGITIFAILGNLAHNLQIENIRDVVRSGTGLAFISYPDAISKFQAVPQLFSVLFFFMLFVLGIGSIVALQSTIVTIICDQFKGLKYWKVALITSACGFLMGLVYVTPGGQWILTLVDFYGGTYVVFILAIFELAGIVWVYGLQNFCDDIEFMCNRRVSLYWRMCWSFFTPVMMIIIFIYSMATIEPIKYSELYFPEAANIAGWLLFAIGAAQFPLWGLWYASTHPQGTYWKSLKASLKPSDRWGPANPETRREWVIFKNQKAAQRATQKSTSKLGFFWRKLTNFCGSNK
What is the function of this protein?
Unusual broad substrate spectrum amino acid:sodium cotransporter that promotes absorption of the D isomers of essential amino acids.  Neutral amino acids are the preferred substrates, especially methionine and phenylalanine (By similarity).
What are the official names of this protein?
Sodium-dependent nutrient amino acid transporter 1.
What is the protein family that this protein belongs to?
Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: U76B1_ARATH
Sequence: METRETKPVIFLFPFPLQGHLNPMFQLANIFFNRGFSITVIHTEFNSPNSSNFPHFTFVSIPDSLSEPESYPDVIEILHDLNSKCVAPFGDCLKKLISEEPTAACVIVDALWYFTHDLTEKFNFPRIVLRTVNLSAFVAFSKFHVLREKGYLSLQETKADSPVPELPYLRMKDLPWFQTEDPRSGDKLQIGVMKSLKSSSGIIFNAIEDLETDQLDEARIEFPVPLFCIGPFHRYVSASSSSLLAHDMTCLSWLDKQATNSVIYASLGSIASIDESEFLEIAWGLRNSNQPFLWVVRPGLIHGKEWIEILPKGFIENLEGRGKIVKWAPQPEVLAHRATGGFLTHCGWNSTLEGICEAIPMICRPSFGDQRVNARYINDVWKIGLHLENKVERLVIENAVRTLMTSSEGEEIRKRIMPMKETVEQCLKLGGSSFRNLENLIAYILSF
What is the function of this protein?
Glycosylates the amino acid-related molecules isoleucic acid (2-hydroxy-3-methylpentanoic acid) and valic acid (2-hydroxy-3-methylbutyric acid).  Acts as a negative regulator of salicylic acid (SA)-dependent plant defense in the absence of pathogens and promotes the jasmonate (JA) response.  Negatively influences the onset of senescence.
What are the official names of this protein?
UDP-glycosyltransferase 76B1.
What is the protein family that this protein belongs to?
Belongs to the UDP-glycosyltransferase family.
Protein: GLYD_STRPN
Sequence: MNKTIVLAGDRNYTRQLETTIKSILYHNRDVKIYILNQDIMPDWFRKPRKIARMLGSEIIDVKLPEQTVFQDWEKQDHISSITYARYFIADYIQEDKVLYLDSDLIVNTSLEKLFSICLEEKSLAAVKDTDGITFNAGVLLINNKKWRQEKLKERLIEQSIVTMKEVEEGRFEHFNGDQTIFNQVLQDDWLELGRAYNLQVGHDIVALYNNWQEHLAFNDKPVVIHFTTYRKPWTTLTANRYRDLWWEFHDLEWSQILQHHMGEFELISPLDKEFSCLTLTNSQDLEGIEELVTALPEVVFHIAAWTDMGDKLKKLAVYNNVRLHPQIVPPVLDKLKKSTNLYLDINHGSADENFLKSLQEQEKTLLAFQSTQHGELGQIVFENGKVSFMIDTIKDFKKNGHLTCFRQLPSLTCLTFTASQYIEQLDYLAGQLPNVVFQIAAWTAMGPKLYDLSNRYPNIQLYPAISRDKLDELKEKMDAYLDINLLTSTSDIVAEMAHLSKPILAFYKSQNGNNGQRLYSSEHPERMLADLQKLITKDMLEKPLDIIQVKGIDETLDYIIEHNSSLVRFGDGEINMLAGHSIPYQDYDEELVSIMRDIIGQESREDLVVCLPDAFTDRFRFTSWAIPFWKDHMDHYMDFYRELCSDSWYGSTFVSRPYIDFEDKSQAKAQFEKLKSIWENRDLLIVEGATSRSGVGNDLFDEANSIKRIICPSHSAFSRVHELEQEIEKYAGGRLILCMLGPTAKVLSYNLCQMGYQVLDVGHIDSEYEWMKMGAKTKVKFSHKHTAEHNFDQDIEFIDDETYNSQIVARILN
What is the function of this protein?
Also catalyzes the fourth step in glycosylation of PsrP in this bacteria.  Can transfer the sugar from both UDP-glucose and UDP-galactose to the terminal sugar moiety of PsrP-GlcNAc-Glc-Glc and PsrP-GlcNAc-Glc-Gal; the C-terminal GT-D domain is also sufficient for this reaction in vitro (using truncated substrates with glycosylated PsrP SSR1).  The N-terminal GT-D domain can transfer galactose from UDP-galactose to PsrP-GlcNAc-Glc-Gal or PsrP-GlcNAc-Glc-Glc in the fourth step.
What are the official names of this protein?
Glycosyltransferase GlyD, PsrP glycosyltransferase GlyD.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the GT-D family.