PharMolix/UniProtQA huggingface dataset:
Protein: NUSB_SYNC1
Sequence: MASGMRRTGRELAIKIIYSFDGTGSVEALLATFWSNFRFRDDVLGEPLEDSSQAVAEPVREFAEDLVRGVAENLEKIDGLIGEFSTNWSLERMARVDLAILRMATYELLGHLDVPVSVIINEAVEIGKRYGTKETPSFVNGILDRISRTCRPVVAS
What is the function of this protein?
Involved in transcription antitermination.  Required for transcription of ribosomal RNA (rRNA) genes.  Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
What are the official names of this protein?
Transcription antitermination protein NusB, Antitermination factor NusB.
What is the protein family that this protein belongs to?
Belongs to the NusB family.
Protein: IF2_BRASB
Sequence: MADNNTPGDKKLSVPTKTLTLKPRVETGTVRQSFPHGRSKQVVVEKRGTKRRVGDGAPDAPHAPEPVVAKAPPPPPPSNRPSGPRPGSSQRGGSGVVLRTLTEDERSARASALADARVRDMEERRQAEEEARRRAEREAAERAEREAAEARRKAEEERHRQEEEAKRKAELEAKKRFGEGEAPRPATAAPQQQPAAVTAPARPAQAPGRPQGAPGSRPQQIGTSARPGGAQPAGARPAAARPAGAGPLGRAPGVAAGPEDDEGPRQIRRGPGGAARPAPPPKTTHKPGPQKQRGRLTVVTALTADDVRERSIASFRRRTQRLKGHAANEQKEKLVREVTIPEAITIQELANRMSERAVDVIRLLMRQGAMHKITDVIDADTAQLIAEELGHSVKRVAASDVEEGLFDVVDDSTDTEPRSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTAPDSGKKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKPDARPDRVRTELLQHEVQVESLGGEVVDVEVSAKNKTNLDRLLEMIALQADILDLKTNSDRPAEGTVIEAKLDRGRGPVATVLVQRGTLRVGDIIVAGAEMGRVRALISDQGETLQEAGPSVPVEVLGFNGPPEAGDRLAVVENEARARQVTSYRAHQKRENAAASISGMRGSLEQMMSQLKTAGRKEFPLVIKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAALAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQAGQECGMAFESYGDMRVGDVIECYRVETIQRSL
What is the function of this protein?
One of the essential components for the initiation of protein synthesis.  Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits.  Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
What are the official names of this protein?
Translation initiation factor IF-2.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: PHNN_CHRVO
Sequence: MADKTGTLWYVMGPSGAGKDSLLAYARQRLPGGVMFAHRYITRPADAGGENHVALSREEFDAREAGGCFALVWRRHGLAYGLGVETELWLGQGMDVVVNGSRSSLPLAMARFPTLRPLWITASPEVLAVRLRQRARECGEVIERRLAEAASFAPPAGCEVLVNDGALAQAGDTLLRWLRGGRRVC
What is the function of this protein?
Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
What are the official names of this protein?
Ribose 1,5-bisphosphate phosphokinase PhnN, Ribose 1,5-bisphosphokinase.
What is the protein family that this protein belongs to?
Belongs to the ribose 1,5-bisphosphokinase family.
Protein: EMC5_SCHPO
Sequence: MESSTINAKKISVLLTLFSIIGYTAYSAHESILEIRQDGKLPLDIKCEVILVTLLFTFTTVIIASPLRSIQLNKWSHQRSDLAFLNSRTNFLRIKELKEKIEKVKN
What is the function of this protein?
The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).
What are the official names of this protein?
ER membrane protein complex subunit 5.
What is the protein family that this protein belongs to?
Belongs to the membrane magnesium transporter (TC 1.A.67) family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein.
Protein: SECA_RICTY
Sequence: MFSILKKLFGTANDRTVKKLFSEITKINSLEPAIKILSDAALKNKTVEFKEKLKNGATLDDILYEAFAVVREAASRVCGMRHFDVQLIGGLILHRGMIAEMRTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAIRDSASMGKIYNFLGLSVGCIVAGMTDEAKRIAYNSDITHATNNELGFDYLRDNMKYSMQERVLRPFNFAIIDEVDSILIDEARTPIVISGPVNDNSALYGKIDKIIRLLNDSDFEKDEKLKTINLTEVGITNIESLLIKDGIIKPDTGLYDFENLNLVHYVNQALRAHHMFTVDVDYLVREGKVMIIDEFTGRVMEGRRYSEGLHQALEAKENVKIQNENQTLASITFQNYFRNYHKLSGMTGTSMTEASELKDIYNLDVVAVPTHNKVTRIDLDDEIYGSKQEKYDAILKLIRDCYNRGQPILVGTISIEKSEELSSILNKEKIPHNVLNAKFHEQEAFIIAQAGRFKAVTIATNMAGRGTDIMLGGNPEMLIEQLNKDRNYVAKTAEIKAQIAEEKQKVIETGGLFVIGTERHESRRIDNQLRGRSGRQGDPGKTQFFLSLDDDLMRIFASDRISGVLRTLGLKNGEAIHHPMISRSLEKAQQKVEAHNYEMRKNLLRFDDVMNDQRKIIYEQRTEIIKSKDSYGFLNSTTEELARKIVLTFMPLGSYREDWDIDNLTVELHRIFSIKFDHNLVHKNDVTEEDITKLVIQMAHDIYKSKEEAYSSELMNNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRAYAQKDPLSEYKREAFNLFEQMLNNLKELFIQTVYHFHIDLRHLQKEDISLEHKKLQKNMCESREDPAFSKYNAGNSIETYLKPVVLRVDPKDRKPDDPMSWGRVSRNELCPCGSGKKYKYCHGAN
What is the function of this protein?
Part of the Sec protein translocase complex.  Interacts with the SecYEG preprotein conducting channel.  Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
What are the official names of this protein?
Protein translocase subunit SecA.
What is the protein family that this protein belongs to?
Belongs to the SecA family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm. Note=Distribution is 50- 50.
Protein: NTP1_HAEPV
Sequence: MFTLDSIVGAHINYALDKTAHLPETITNNVSNVEITLKDYQYFVSRVFIGLKNLNSMLLFWDTGMGKTLTAVYIIKHIKELFPRWIILIFIKKSLYIDPWLNTIRAFAPDISNNIIFVYYDSSSSLDKFVNIYRSIENSLNKKNRLLIIIDEVHKLISRSVKKDNSERNFTPTYKKLIKLANYEGNKILCMSATPIYNNIDEFNNLIGLLRPNVMTFKEEYIINGKLINFKEIRDTLLGLCSYKRLIEADSFTETNYVEGYAKKNVIYHNIIMSEEQSKLFNLAEKYDYKTELGGLKTMRRLVSSFAFYDLKIKGDLNNIEYNDMIKRKLAEFSEFTKTINFSNNFIEKFKRDDLKNDILLEDINNYNILYQYSCKYIEACRIILNSRGKVLLFEPLVNFEGIASLKYYFNCFNITYVEYSSKTLKTRDIEISEYNNYENNDGKNIKVCIFSYAGSEGISFKCVNDIIILDMPWNESELKQIMGRSIRLNSHNDLPLENRYVNVHFIISYTNNRKSVDKEILDIIKDKQSKINVVFDLLKSISIESIHNIHKYIEPVESETIFDTIRKTRMREMNISNVIVKIKLYPIMYCKDYDRATILKGLLNKENNIIYNEDTAVAKLTIENNKPVFIIVDDNLIYIADDYYE
What is the function of this protein?
DNA-dependent ATPase required for providing the needed energy to achieve the termination of early transcripts.  Acts in concert with the RAP94 subunit of the virion RNA polymerase and the capping enzyme/VTF to catalyze release of UUUUUNU-containing nascent RNA from the elongation complex.  NPH-I must bind ssDNA in order to exhibit ATPase activity (By similarity).
What are the official names of this protein?
Nucleoside triphosphatase I, NPH-I, Nucleoside triphosphate phosphohydrolase I, NPH I.
What is the protein family that this protein belongs to?
Belongs to the helicase family. NPH I subfamily.
What are the subcellular locations of this protein?
Virion. Note=Virion core enzyme.
Protein: CAPSD_FHV
Sequence: MVNNNRPRRQRAQRVVVTTTQTAPVPQQNVPRNGRRRRNRTRRNRRRVRGMNMAALTRLSQPGLAFLKCAFAPPDFNTDPGKGIPDRFEGKVVSRKDVLNQSISFTAGQDTFILIAPTPGVAYWSASVPAGTFPTSATTFNPVNYPGFTSMFGTTSTSRSDQVSSFRYASMNVGIYPTSNLMQFAGSITVWKCPVKLSTVQFPVATDPATSSLVHTLVGLDGVLAVGPDNFSESFIKGVFSQSACNEPDFEFNDILEGIQTLPPANVSLGSTGQPFTMDSGAEATSGVVGWGNMDTIVIRVSAPEGAVNSAILKAWSCIEYRPNPNAMLYQFGHDSPPLDEVALQEYRTVARSLPVAVIAAQNASMWERVKSIIKSSLAAASNIPGPIGVAASGISGLSALFEGFGF
What is the function of this protein?
Membrane-permeabilizing peptide produced by virus maturation, thereby creating the infectious virion.  After endocytosis into the host cell, peptide gamma is probably exposed in endosomes, where it permeabilizes the endosomal membrane, facilitating translocation of viral capsid or RNA into the cytoplasm (Probable).
What are the official names of this protein?
Capsid protein alpha.
What is the protein family that this protein belongs to?
Belongs to the peptidase A6 family.
What are the subcellular locations of this protein?
[Capsid protein beta]: Virion. SUBCELLULAR LOCATION: [Peptide gamma]: Virion. Note=Located inside the capsid and probably externalized in early endosomes.
Protein: R15PI_PYRFU
Sequence: MGAMIVREVFEIAEKIKNMEIRGAGEIARAVAEALKIQAEKSKAKTSHELWKELKEASKILYNTRPTAVSLPNALRYVMYRGKIAYTSNADLESLRYTIINAAKEFIYNSEKAIERIGEIGAKRIEDGDVIMTHCHSKAAISVMKTAFDQGKDIKVIVTETRPRWQGKITAKELASYGIPVIYIVDGAARHYMKMTDKVVMGADSITANGAVINQIGTALIALTAKEHRVWVMIAAETYKFHPETMLGQLVEIEMRDPTEVVPKEELETWPKNIEVLNPAFDVTPPEYIDVIITEKGVIPPYAAIDILKEEFGWAFKYREPWED
What is the function of this protein?
Catalyzes the isomerization of ribose 1,5-bisphosphate (R15P) to ribulose 1,5-bisphosphate (RuBP), the CO(2) acceptor and substrate for RubisCO.  Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and RubisCO.
What are the official names of this protein?
Ribose 1,5-bisphosphate isomerase, R15P isomerase, R15Pi, Ribulose 1,5-bisphosphate synthase, RuBP synthase.
What is the protein family that this protein belongs to?
Belongs to the eIF-2B alpha/beta/delta subunits family. R15P isomerase subfamily.
Protein: BH100_ARATH
Sequence: MCALVPPLYPNFGWPCGDHSFYETDDVSNTFLDFPLPDLTVTHENVSSENNRTLLDNPVVMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISSLQTEKCSFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQIKNGQVNSEELGDRLLYLYEKCGHSFT
What is the function of this protein?
Plays a role in metal homeostasis.  Confers tolerance to high zinc (Zn) and nickel (Ni).
What are the official names of this protein?
Transcription factor bHLH100, Basic helix-loop-helix protein 100, AtbHLH100, bHLH 100, Transcription factor EN 7, bHLH transcription factor bHLH100.
What are the subcellular locations of this protein?
Nucleus.
Protein: ARNF_ECO8A
Sequence: MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPMTKQRY
What is the function of this protein?
Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane.
What are the official names of this protein?
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF, L-Ara4N-phosphoundecaprenol flippase subunit ArnF, Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF.
What is the protein family that this protein belongs to?
Belongs to the ArnF family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: HIFD1_HAEIF
Sequence: MQKTPKKLTALCHQQSTASCSGSNYSGSNYSGSKCFRLHRLALLACIVALPAYAVDGRVTFQGEIVSDGTCKIETDSKNRTVTLPTVGKANLSLAGQTAAPVPFSITLKECNAADAKKANLLFSGAVTKGQLYLSNAASSGKANNVGIQIVKADGTGSPINVDGSQANSEKAPDTGKEQNSTVIQPRFDYFAHYYATGAATAGEVEATATFQVQYN
What is the function of this protein?
May be a minor structural protein required for pilus biogenesis.
What are the official names of this protein?
Minor fimbrial subunit HifD.
What is the protein family that this protein belongs to?
Belongs to the fimbrial protein family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor. Fimbrium.
Protein: AROA_NITMS
Sequence: MKCKVEKSKISGQIVCPSNKSYTHRAIFLASLAGNGSKVENVLLSADTMATVEACKKFGASIEIENSSIIVKNPIKFDKIVPEINTENSGTTIRIASGIASLFSEEITLTGDESLQKRPMQPLLDALSSIGAQCQSTDGKPPIKITGKISGGDVTIPGNFSSQFISALLISAPLTEKGINLSIKDNLVSKPYLDATIATMRKFGVSVQTLIPYKRYNISPQVYNAATFTVPIDFSSLALLLSAAVLNGDETVIKGNIGNLPQGDEVFIDILEQLGVTVNIGEDEIKIKSPEKLKGGRFDLSNSPDLLPPLTILALNSENPIEIVNVKHARLKETDRIAITSRELVKLGIKVQENEDGLILESTENLTGAELNSENDHRLFMAFCIAGMYVGNCVVTDPESVQVSYPDFVEEMNRIGARIQPE
What is the function of this protein?
Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
What are the official names of this protein?
3-phosphoshikimate 1-carboxyvinyltransferase, 5-enolpyruvylshikimate-3-phosphate synthase, EPSP synthase, EPSPS.
What is the protein family that this protein belongs to?
Belongs to the EPSP synthase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TPSD1_PINBN
Sequence: MALPSSSLSSQIHTGATTQCIPHFHGSLNAGTSAGKRRSLYLRWGKDNQAKKFGPSKIVACAGQDPFSVPTLVKREFPPGFWKDHVIESLMPSYKVAPSDEKRIETLITEIKNMFRSMGYGETNPSAYDTAWVARIPAVDGSEKPQFPETLEWILQNQLKDGSWGEEFYFLAYDRILATLACIITLTIWQTGDTQVQKGIEFFKTQAGKIEEEADSHRPSGFEIVFPAMLKEAKALGLDLPYELPFIQQIIEKREAKLQRLPPDLLYALPTTLLYSLEGLQEIVDWEKIMKLQSKDGSFLSSPASTAAVFMRTGNKKCLEFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDTGAFDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYIENYGPNDVWLGKTMYMMPNISNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLFQPVA
What is the function of this protein?
Involved in defensive oleoresin formation in conifers in response to insect attack or other injury.  Involved in diterpene (C20) olefins biosynthesis.  Bifunctional enzyme that catalyzes two sequential cyclizations of geranylgeranyl diphosphate (GGPP) to levopimaradiene.  Levopimaradiene is the major products of the enzyme with abietadiene and neoabietadiene.  No activity with farnesyl diphosphate (FPP) as substrate.
What are the official names of this protein?
Bifunctional levopimaradiene synthase, chloroplastic, PbLAS1, Diterpene synthase.
What is the protein family that this protein belongs to?
Belongs to the terpene synthase family. Tpsd subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RIMM_VIBC3
Sequence: MSMKGKETMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRHNKGWVVKLQGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLGVVTDMMETGSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVDWDPAF
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: COAA_SALPK
Sequence: MSIKEQSLMTPYLQFDRSQWAALRDSVPMTLTEDEIAQLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPEGDKTVAQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEELLQTWYINRFLKFREGAFTDPDSYFHNYAKLSKEEAVNTAASLWKEINWLNLKQNILPTRERASLIMTKSANHAVEQVRLRK
What are the official names of this protein?
Pantothenate kinase, Pantothenic acid kinase.
What is the protein family that this protein belongs to?
Belongs to the prokaryotic pantothenate kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KHSE_CLOB6
Sequence: MVEVRVPATSANIGSGFDCLGVAVNMYNKFFVEEIEEGLIFEGCADKFKNEDNLIYVAMKKCFDKIGYKPTGLRIKIESDIPVSRGLGSSAACVVGGIVSANELAGGVLNKKELLDLAVEVEGHPDNVNPAFCGGMTASISDNREVIYSKVKVSEGIKFCALIPDFTLSTEKARAVLPKSIDYKDGIFNVGRTALMISALNNGDFHLIKYACKDKLHQDYRAKLIENFYSIKEECEKLNSLGVFLSGAGPTIMVMLREEDKDFSKNIKSFLETLKNKWEVRELKIDKLGTVVNNRKV
What is the function of this protein?
Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate.
What are the official names of this protein?
Homoserine kinase, HK, HSK.
What is the protein family that this protein belongs to?
Belongs to the GHMP kinase family. Homoserine kinase subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUVA_STRT2
Sequence: MYDYIKGTLVKITAKHIVIETNGLGYIVTVANPYSFSDQMNQTIQVYLHQVIRDDAHLLFGFHTEDEKEVFLKLISVSGIGPTTALAIVAVDDNQGLVAAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFAELPAETTNTTANQTAGNQQLDEAMEALLALGYKSTELKKVKAFFEDTNETAEQYIKSALKMLMK
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvA.
What is the protein family that this protein belongs to?
Belongs to the RuvA family.
Protein: RNT_PASMU
Sequence: MTEIQAEATNTHLLKHRFRGYFPVIIDVETAGFNAKTDALLELAAITVKMNEDGLLVPDQTCHFHIEPFAGANINPESLQFNGIDIHNPLRGAVSETVAITELFKMVRKAQKAADCQRSIIVAHNAAFDQSFLMAAAERTGVKRNPFHPFGMFDTATLSGFMFGQTVLVKACQAAQIAFDGKQAHSALYDTERTAELFCYMVNHLKHLGGFPHQQANEKK
What is the function of this protein?
Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang.  Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A).  Also appears to be involved in tRNA biosynthesis.
What are the official names of this protein?
Ribonuclease T, Exoribonuclease T, RNase T.
What is the protein family that this protein belongs to?
Belongs to the RNase T family.
Protein: GLMU_BUCAI
Sequence: MLTQEIIIVILAAGKGTRMKSNHPKVLHFLGGKTILEHVIETAQSIKPKKIILVYSDQKKPVLSNIYNIPIQWIIQKKPQGTGHAILLAIKKISDNTEILVLYGDVPFISPVSIKKLQKSKKQSKISLLTAKVKNPNGYGRILRKKGKVISIIEDQDASNEQKNIKEIYSGIFIAQSKDLTRWLKKIDKKNEKQEFYATDIIALAHLEGSFIKTIEPLNYEEILGINNKLQLSNLEKIFQKKQINKLLINGVTIKDPSHFIFRGTLQHGQNVEIDTGVILENNVILGDDVKIGPGCIIRNSSIDSNTNIQAYTIIENSKIGKGCIIGPFAHLRSNTLLDRNVHIGNFVETKDTFIKNESKVKHLSYLGNSEIGSKVNIGAGSITCNYDGANKFKTIIGDNVLVGSNTQLIAPIKIAKNTTIAAGTTVTKDVNTPCLVYNTKEQKYKKNWMRSKKIIKKN
What is the function of this protein?
Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc).  The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.
What are the official names of this protein?
Bifunctional protein GlmU.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the transferase hexapeptide repeat family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KTHY_BARHE
Sequence: MSGYFITFEGGEGVGKTTQIFLLAQHLYGKGYDVLTTREPGGTAGAEVIRHILLSGQVQQHYGPLIEAILFTAARIDHVSEVIMPSLQKGKVVLCDRFIDSTRVYQGLNDKVSSSTLAVLECLALNKIKPQITFLLDIPARCSMKRANLRREKAETIDYFEKDELKIQEQRRQAFLQLAKQEPHRFRVIDGTDTVEVIAQQIRDICDQVMLDQLP
What is the function of this protein?
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis.
What are the official names of this protein?
Thymidylate kinase, dTMP kinase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate kinase family.
Protein: YGGU_ECOK1
Sequence: MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN
What are the official names of this protein?
UPF0235 protein YggU.
What is the protein family that this protein belongs to?
Belongs to the UPF0235 family.
Protein: 5NTD_TREPA
Sequence: MKRFIPHRVIHAVCIGLALVGCRKLDSRAGDFELTIIHINDHHSHLEPEPLELAVAGERLRAAVGGYAALVHEIQRLRAESKNALVLHAGDALIGTLYSTLFRGRADAVLMNHAGFDFFTLGNHEFDNGNEGLKEFLHYLEVPVLSANVVPNAASTLHGLWKPSAIVERAGERIGVIGLDTVKKTVESSSPGKDINFIDEIEAVRRATVEMQQQGVNKIILLSHAGFEKNCEIAQNISGIDVIVSGDTHYLLGDESLGRLGLPVVGEYPRKIMSPAGEPVYVVEAWEYGKCLGELNVVFDRTGVITSAVGMPRFLLHTNTLQKKGADRKNYPLEEAEREALLVALRMTPEIIFAQENDQIISVLEEFKKEKEALGAQAIGVITGASMRGGSVHRVPDAQNPQGSVATRFVAETMLSDIQSFGAGKVDCVIQNAGGARSNIQPGEITYNDAYTLLPFSNTLVLVDVSGAELKQIIEDALQFALGDGSTGAFPYGAGVRYEARQEPDEHGKRVIKLEVQKKDGAWVPVDERAPYRLGVNSYIARGKDGYKTLGEIVSTRGAEDTYLRDAESLIKFLRAHKNFRAYTDSNVIFRLK
What are the official names of this protein?
Probable 5'-nucleotidase.
What is the protein family that this protein belongs to?
Belongs to the 5'-nucleotidase family.
What are the subcellular locations of this protein?
Cell membrane; Lipid-anchor.
Protein: CIP2_SCHPO
Sequence: MAEGTSQRPLTPLSQAFLSTNTLSPASSPLTFHSEAASLRRKRSNFFPKLDELNGAQDEEMRGLNIPGGSGYLENRYGRDKFTFSDAAVNSAGMGGSGIFSHNNADDGLGDGSSTVLPSSLKQMLDPEISTANNPSAKPRRTRLQTAWKEATNSAGLSLRSASALDVLKNSGPATTSLLSSTTYPFDSLNAFNEPSHSHVPNSASSTALSRGMSNSVTLTAPPEPDEETIPTAIVIKNIPFSLKKEVLFKVFTALDIPRPYAFNYHFDNGVFRGLAFANFHSPEEAKTVVQVLNGYEITGRRLRVEWKRQLPPAERERVERGKQEKRAVEERKNQLKSPFSVANIGAGIDFDLNDPAILNVYSHILLFYYRSDNTNDLVFDSSTTQEERRVAALLASRLNLNHSVTGDGEAKQVVITMPSTHFTPANNSSANHSPLMAPNASTLNPSSLGASNLSQPSLANHLSSSGLFDNGLFSSGGLSSNFSSLRRPAPSMHLADSIRSLRGLNDSKAFSDIRSMPATPLELATPFANLNVSSPLDRNATNSSNTLNGSAMNDYFASLTPSNTGAIGSRTFTKN
What is the function of this protein?
Regulates global gene expression after oxidative stress.  Interacts and stabilizes mRNAs and may regulate their transition between different cytoplasmic components after oxidative stress.
What are the official names of this protein?
RNA-binding post-transcriptional regulator cip2, Csx1-interacting protein 2.
Protein: THIM_STAES
Sequence: MNNLERLRSENPLVICYTNDVVKNFTANGLLSLGASPAMSEAPEEAEDFTRMASALLINIGTLTRENEEDIIKIGKIANQQGTPIVFDPVAVGASTYRKNFCQRFLGEVNVTVIKGNASEILTLIDFNTTMKGTDSDSELDSVNIAKKAANTLNTAIVITGKDDIIAKNEKIIKLSNGSPLLTKITGAGCLLGGVLASFLFRNTQPSIDLLVEAVSVYNIAAEFAEQAPHVNGPSTFLSELLDQLYQMNDITYKNQVKKVEI
What is the function of this protein?
Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ).
What are the official names of this protein?
Hydroxyethylthiazole kinase, 4-methyl-5-beta-hydroxyethylthiazole kinase, TH kinase, Thz kinase.
What is the protein family that this protein belongs to?
Belongs to the Thz kinase family.
Protein: TOC34_PEA
Sequence: MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDGPNPNQRGKLWIPLIFALQYLFLAKPIEALIRRDIATETKPAWETRDVGDRK
What is the function of this protein?
GTPase involved in protein precursor import into chloroplasts.  Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.
What are the official names of this protein?
Translocase of chloroplast 34, 34 kDa chloroplast outer envelope protein, GTP-binding protein IAP34, GTP-binding protein OEP34.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. AIG1/Toc34/Toc159-like paraseptin GTPase family. TOC34 subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast outer membrane.
Protein: TCPD_KLULA
Sequence: MVSQAKQPSNATFKNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTKISLDDKEALVRAASTSLSSKIVSQHSSFLAPLAVDCVLSIASHDSTNVDLNDIRLIKKVGGTIDDTEMVNGVVLTQNAVKTAGGPTRIEKARIGLIQFQISPPKPDTENNIVVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLGIMVVRDIERDEVEFLSKSLGCKPISDVELFTEDRLGSADVVEEVESDGSNIVTITGVKTTNKNPTVSVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSYRLMKEARTMEGVEAFVWQEYAEALEVIPTTLAENAGLNSLNVVTELRLRHENGESNSGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDITFSR
What is the function of this protein?
Molecular chaperone; assists the folding of proteins upon ATP hydrolysis.  Known to play a role, in vitro, in the folding of actin and tubulin (By similarity).
What are the official names of this protein?
T-complex protein 1 subunit delta, TCP-1-delta, CCT-delta.
What is the protein family that this protein belongs to?
Belongs to the TCP-1 chaperonin family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y1064_HALMA
Sequence: MTTVTLVGTRLAEVGAEFVYRGEASGCEGCPYRDQCLNLTTGNRYRITNVRQSGQTLDCAVHENGVRAVEVEPAPIQANVPSKGAYAGSKASLPGPCPHTECPSHPYCEPAGAEFDEEYRISEIVGDPPHDYCMLDRDLTLVELEAPGE
What are the official names of this protein?
UPF0179 protein rrnAC1064.
What is the protein family that this protein belongs to?
Belongs to the UPF0179 family.