PharMolix/UniProtQA huggingface dataset:
Protein: Y3006_COXBU
Sequence: MRMFRESKSEEKKSPSSQTAGLFATVPSLKDIMIDRLIEQLGGIAELNKQVVRDPRLWGAINERLTQHFLLLVVQGKQGQVEAMLKVNPALILFARGDVTDYSGQTFKNISAWEYVLWAYDSHMYRMLFNYIPKEQRPLALQQLIDLETNGIAYTLSEKVMNAEREAEETRETIIREAHYDFSPLIDALQTYVTNVERWSFEECVEHWRKKVGGAQCMVPVHVGNEYCYPDRSFDPIPRFNEKNLPRRHNFYNYVSGADESWFPLSPAGLGTNFAIMRGCMRAVAGACWRVGRQWACNDLAAITALREVRQSDLIQLKEQLQNPAPESAPSTSKTLRSKNP
What are the official names of this protein?
Uncharacterized protein CBUA0006.
Protein: Y3863_PSEU2
Sequence: MSSAICPCGSGDLLLACCGRYHAGQPAPGAEKLMRSRYSAYVLGLTDYLVQTTLPVQQGGLDREAIAQWSAQSTWLGLEVESSEVFGGKPEHAFVTFTARWHDGNGEHSHRERSSFVQNQGRWYFIDSTVPLKAGRNDACPCGSEQKFKKCCSAYVE
What are the official names of this protein?
UPF0225 protein Psyr_3863.
What is the protein family that this protein belongs to?
Belongs to the UPF0225 family.
Protein: GH310_ORYSJ
Sequence: MAAKGISTIGAASRSLSSSLMAAAKEPDVENLRLIEELTSNVDAVQERVLAEILGRNADAEYLDKCGLDASDTDRATFRAKVPVASYDDLKPYVKRIANGDRSPILSTHPIIEFFTSSGTSAGERKLMPIVTDEMARREVLSSLATSVLNVYVPGLHTGKGLYFLFARSETKTPGGLTAQPALTSVYKSEHFKRAYAYTSPMAAILCEDASQSMYAQMLCGLCQRHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNPRVTDPSDRECSRGDWTGIVTRLWPKTKCLNVVVTGVMAQYIPTLQYYSGGLPIVSGMYASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLPVGEAVDASNLVELARVEDGREYEVVVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVRRQSVLLSIEADKTDEAELQRAVERASSALLRPRGASIVEYTSRACTERVPGHFSPALPHWTLAP
What is the function of this protein?
May catalyze the synthesis of indole-3-acetic acid (IAA)-amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin.
What are the official names of this protein?
Putative indole-3-acetic acid-amido synthetase GH3.10, Auxin-responsive GH3-like protein 10, OsGH3-10.
What is the protein family that this protein belongs to?
Belongs to the IAA-amido conjugating enzyme family.
Protein: SNR40_HUMAN
Sequence: MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ
What is the function of this protein?
Required for pre-mRNA splicing as component of the activated spliceosome (PubMed:11991638, PubMed:28502770, PubMed:28781166, PubMed:28076346, PubMed:30315277, PubMed:29360106, PubMed:29301961, PubMed:30705154).  Component of the U5 small nuclear ribonucleoprotein (snRNP) complex and the U4/U6-U5 tri-snRNP complex, building blocks of the spliceosome (PubMed:9774689, PubMed:16723661, PubMed:26912367).  As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs (Probable).
What are the official names of this protein?
U5 small nuclear ribonucleoprotein 40 kDa protein, U5 snRNP 40 kDa protein, U5-40K, 38 kDa-splicing factor, Prp8-binding protein, hPRP8BP, U5 snRNP-specific 40 kDa protein, WD repeat-containing protein 57.
Protein: NFI_BACSU
Sequence: MKVFDVHKFDMKKEQDFLQVQFNLKNRINLSPTIHPDSINTCAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADLETHVLRTFYQKNHV
What is the function of this protein?
DNA repair enzyme involved in the repair of deaminated bases.  Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
What are the official names of this protein?
Endonuclease V, Deoxyinosine 3'endonuclease, Deoxyribonuclease V, DNase V.
What is the protein family that this protein belongs to?
Belongs to the endonuclease V family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: VIV1_MAIZE
Sequence: MEASSGSSPPHSQENPPEHGGDMGGAPAEEIGGEAADDFMFAEDTFPSLPDFPCLSSPSSSTFSSNSSSNSSSAYTNTAGRAGGEPSEPASAGEGFDALDDIDQLLDFASLSMPWDSEPFPGVSMMLENAMSAPPQPVGDGMSEEKAVPEGTTGGEEACMDASEGEELPRFFMEWLTSNRENISAEDLRGIRLRRSTIEAAAARLGGGRQGTMQLLKLILTWVQNHHLQRKRPRDVMEEEAGLHVQLPSPVANPPGYEFPAGGQDMAAGGGTSWMPHQQAFTPPAAYGGDAVYPSAAGQQYSFHQGPSTSSVVVNSQPFSPPPVGDMHGANMAWPQQYVPFPPPGASTGSYPMPQPFSPGFGGQYAGAGAGHLSVAPQRMAGVEASATKEARKKRMARQRRLSCLQQQRSQQLSLGQIQTSVHLQEPSPRSTHSGPVTPSAGGWGFWSPSSQQQVQNPLSKSNSSRAPPSSLEAAAAAPQTKPAPAGARQDDIHHRLAAASDKRQGAKADKNLRFLLQKVLKQSDVGSLGRIVLPKKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGEFVRSNELQEGDFIVIYSDVKSGKYLIRGVKVRPPPAQEQGSGSSGGGKHRPLCPAGPERAAAAGAPEDAVVDGVSGACKGRSPEGVRRVRQQGAGAMSQMAVSI
What is the function of this protein?
Transcriptional activator specifically required for expression of the maturation program in the seed development.  Probably potentiates the response to the seed-specific hormone abscisic acid (ABA).  May bind to DNA indirectly.
What are the official names of this protein?
Regulatory protein viviparous-1.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus.
Protein: PNP_ECO81
Sequence: MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RLMD_PROMH
Sequence: MVQFYSPKKRPAKKQVKNLAVTANALDANGQGIAHAEGKTIFVKGLLPQETARIRLTEEKRQFAKGEVITRLTTNPERVTPPCQYYQHCGGCQQQHVPIDWQRTTKAEVLSHLIKRETNVVISAQPVIAGAEYGYRRRARLGLRYHPKKGLVMGFRQALSNDLVMVTQCPVLKPQLNVLLLPLWQCLKQLSVVRDLGHVELVLADNGPLVILRHLSPLSEGDKQLLDDFSHHAQVMIYLAGDNGEIAQLTTIEKEPFYQIEGLKLHFAPTDFIQVNDEINHKMVAQAIAWLDLSPNDRVLDLFCGMGNFTLPMAKRVDKVVGVEGVPALVAMAKKNAELNQLDNVQFWHADLSADFSAMPWAQEGFNKVLLDPARAGAAQVMSHIVTLSAEKIVYVSCNPTTLARDSKILLDSGYQLTQLRMLDMFPQTGHLESMALFIRK
What is the function of this protein?
Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA.
What are the official names of this protein?
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, 23S rRNA(m5U1939)-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.
Protein: KN7D_ORYSJ
Sequence: MATRPASRQRRASSAAAAVAVVRSSPQPQQQQQQQLPIPQSGSPTSTTTTTTSSSRLTPELSLDGPASPLFAGLDEDPAPKENVTVTVRFRPLSPREIRQGEEVAWYADGDTVVRSEQNPSVAYAYDRVFAPTTTTRQVYDVAAQHVVSGAMEGVNGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDPQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTVESSPCGESNEGEAVTFSQLNLIDLAGSESSRAETTGVRRKEGSYINKSLLTLGTVISKLTDGKATHIPFRDSKLTRLLQSSLSGQGRVSLICTVTPASSNSEETHNTLKFAHRAKRIEVQASQNKIIDEKSLIKKYQNEIRRLKEELEQLKMGIITGTPVKDAGEDNIILWKQKLEDGNVKLQSRLEQEEEAKAALLARIQRLTKLILVSTKATQTSRFSPHPGPRRRHSFGEEELAYLPYKRRDIVLDNESNELLSPVEGLGMTLEDSKEEKKNRKGILNWFKLRKREGGASILTSSEGDKSSLTKSTAPSTPIGESVNFPSEPRISNSLVGESASVDLFSIGHGEFATDSLHGEETPLASRKTIDHVDLLREQLKILSGEVALHTSVLKRLTEEAGRSPNNEKIQMEMKKVNDEIKGKKHQIASLERQIPHSISNNQGMADKLELTPSYAELLEQLNEKSFDLEVKAADNRVIQDQLNEKTTECMELQEEVAHLKEQLYQTLQAKDSLSNSIMMQKNAGINHETDNHADQELSVPREVPGETSPKEPQSVEIDELKQKVCELIEVKAQLETRNQKLLEESTYAKGLASAAGVELKALSEEVTKLMNQNEKLASELASVRSPTPRRANSGLRGTRRDSISRRHEPAPRRDNNAGYEREKALEAVLMEKEQKEAELQRRIEESKQKEAFLESELANMWVLVAKLKKSQGHDLEDFDTKYIGS
What is the function of this protein?
Probable minus end-directed motor protein with a microtubule-enhanced ATPase activity.  Binds ATP/ADP in vitro.  Retains total enzymatic activity even after the removal of the ADP bound in the active site.
What are the official names of this protein?
Kinesin-like protein KIN-7D, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RL25_CALS8
Sequence: MEPVLVYNKRETFTKSNLNKLRKEGYIPAVAYGDDIKSLPGYVSKKEFEKLYKQKGLAGKIKILIDGKERTALIKEVQTHYVKGNIIHVDFQILSENKPIYVEVPIVFENAEILKSRGLVLQRQIDTVEIEGLPKDIPEHLVIDLMEYEKPTAIKLRDIKLPEGIKITEDLDEVVAVIDVSEITEEPETEEKKEEGASSVSNS
What is the function of this protein?
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.
What are the official names of this protein?
50S ribosomal protein L25, General stress protein CTC.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
Protein: CFI_ORYSI
Sequence: MAAVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVSA
What is the function of this protein?
Catalyzes the intramolecular cyclization of bicyclic chalcones into tricyclic (S)-flavanones.  Responsible for the isomerization of 4,2',4',6'-tetrahydroxychalcone (also termed chalcone) into naringenin (By similarity).
What are the official names of this protein?
Chalcone--flavanone isomerase, Chalcone isomerase.
What is the protein family that this protein belongs to?
Belongs to the chalcone isomerase family.
Protein: SSD1_YEAST
Sequence: MSKNSNVNNNRSQEPNNMFVQTTGGGKNAPKQIHVAHRRSQSELTNLMIEQFTLQKQLEQVQAQQQQLMAQQQQLAQQTGQYLSGNSGSNNHFTPQPPHPHYNSNGNSPGMSAGGSRSRTHSRNNSGYYHNSYDNNNNSNNPGSNSHRKTSSQSSIYGHSRRHSLGLNEAKKAAAEEQAKRISGGEAGVTVKIDSVQADSGSNSTTEQSDFKFPPPPNAHQGHRRATSNLSPPSFKFPPNSHGDNDDEFIATSSTHRRSKTRNNEYSPGINSNWRNQSQQPQQQLSPFRHRGSNSRDYNSFNTLEPPAIFQQGHKHRASNSSVHSFSSQGNNNGGGRKSLFAPYLPQANIPELIQEGRLVAGILRVNKKNRSDAWVSTDGALDADIYICGSKDRNRALEGDLVAVELLVVDDVWESKKEKEEKKRRKDASMQHDLIPLNSSDDYHNDASVTAATSNNFLSSPSSSDSLSKDDLSVRRKRSSTINNDSDSLSSPTKSGVRRRSSLKQRPTQKKNDDVEVEGQSLLLVEEEEINDKYKPLYAGHVVAVLDRIPGQLFSGTLGLLRPSQQANSDNNKPPQSPKIAWFKPTDKKVPLIAIPTELAPKDFVENADKYSEKLFVASIKRWPITSLHPFGILVSELGDIHDPDTEIDSILRDNNFLSNEYLDQKNPQKEKPSFQPLPLTAESLEYRRNFTDTNEYNIFAISELGWVSEFALHVRNNGNGTLELGCHVVDVTSHIEEGSSVDRRARKRSSAVFMPQKLVNLLPQSFNDELSLAPGKESATLSVVYTLDSSTLRIKSTWVGESTISPSNILSLEQLDEKLSTGSPTSYLSTVQEIARSFYARRINDPEATLLPTLSLLESLDDEKVKVDLNILDRTLGFVVINEIKRKVNSTVAEKIYTKLGDLALLRRQMQPIATKMASFRKKIQNFGYNFDTNTADELIKGVLKIKDDDVRVGIEILLFKTMPRARYFIAGKVDPDQYGHYALNLPIYTHFTAPMRRYADHVVHRQLKAVIHDTPYTEDMEALKITSEYCNFKKDCAYQAQEQAIHLLLCKTINDMGNTTGQLLTMATVLQVYESSFDVFIPEFGIEKRVHGDQLPLIKAEFDGTNRVLELHWQPGVDSATFIPADEKNPKSYRNSIKNKFRSTAAEIANIELDKEAESEPLISDPLSKELSDLHLTVPNLRLPSASDNKQNALEKFISTTETRIENDNYIQEIHELQKIPILLRAEVGMALPCLTVRALNPFMKRV
What is the function of this protein?
Can suppress the lethality due to deletion of SIT4, and partially the defects due to BCY1 disruption.  Is implicated in the control of the cell cycle G1 phase.
What are the official names of this protein?
Protein SSD1, Protein SRK1.
What is the protein family that this protein belongs to?
Belongs to the RNR ribonuclease family.
Protein: IHH_DEVPA
Sequence: VMNLWPGVRLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYAMLARLAVEAAF
What is the function of this protein?
Intercellular signal essential for a variety of patterning events during development.
What are the official names of this protein?
Indian hedgehog protein, IHH.
What is the protein family that this protein belongs to?
Belongs to the hedgehog family.
What are the subcellular locations of this protein?
Cell membrane. Secreted, extracellular space. Note=Indian hedgehog protein N- product: Cell membrane; Lipid-anchor; Extracellular side. The N- terminal peptide remains associated with the cell surface. Indian hedgehog protein C-product: Secreted, extracellular space. The C- terminal peptide diffuses from the cell.
Protein: A2M_OCTVU
Sequence: KPSGCGEQNMINFYPNVL
What is the function of this protein?
Is able to inhibit all four classes of proteinases by a unique 'trapping' mechanism.  This protein has a peptide stretch, called the 'bait region' which contains specific cleavage sites for different proteinases.  When a proteinase cleaves the bait region, a conformational change is induced in the protein which traps the proteinase.  The entrapped enzyme remains active against low molecular weight substrates (activity against high molecular weight substrates is greatly reduced).  Following cleavage in the bait region a thioester bond is hydrolyzed and mediates the covalent binding of the protein to the proteinase.
What are the official names of this protein?
Alpha-2-macroglobulin homolog, Alpha-2-M.
What is the protein family that this protein belongs to?
Belongs to the protease inhibitor I39 (alpha-2-macroglobulin) family.
What are the subcellular locations of this protein?
Secreted.
Protein: Y1259_ARATH
Sequence: MAILIPASFGRLTITSRAQVRVRVSASANQRTIRRDSVDWVKETSSFFEEDKRPIMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL
What are the official names of this protein?
DCC family protein At1g52590, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the DCC thiol-disulfide oxidoreductase family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: RL17_SUBDO
Sequence: MGRYAIEPENPAKSCKARGEDLRVHFKNTRETAQAIKGMHLKKALRYLNDVIEKKQIIPFRRFSGGVGRKAQAKNFKTPGSQGRWPKKSAQFLIQLLRNAESNAEVKMLNTDALVIDHIQVNRAAHLRRRTYRAHGRINPYMTSPCHIEMFLVEKDEAVPKGEDDTAQKKKVSQKKLKKQKLKAALSGGAD
What are the official names of this protein?
60S ribosomal protein L17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL22 family.
Protein: RIMP_CUPNH
Sequence: MHLADLIETTLSGMGYELVELERAPAGLLRVYIDQPETGIAIEDCEKVSRQLTHVFTVENVDYERLEVSSPGLDRPLKKLADYVRFAGEEARVTLRLPVNGQKNFTGILREPTGAAGEEKIGLEFEGKDGPALLEFAVSDVDKARLVPVIDFKGNQRKGNKQ
What is the function of this protein?
Required for maturation of 30S ribosomal subunits.
What are the official names of this protein?
Ribosome maturation factor RimP.
What is the protein family that this protein belongs to?
Belongs to the RimP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYR_ALKCK
Sequence: MNHMERKKEQLRVEVRRAVLQAELATESEVPSVLLEAPKDKAHGDFATNIAMQLARIAKKAPRAIAEELVANFDRKQAGIEKIEIAGPGFINFFLDNGYLRELIPQVLTEKDDYGSSDVGQGEKVLIEFVSANPTGDLHLGHARGAAVGDTIANIMDKAGYKVSREYYINDAGNQIENLAASLNARYLQVLGEDQPMPEDGYHGQDIIDIAKQLVDEAGDQYRQLDEKERLAFMRDYGLKKELEKIKQDLNAYRVEFDKWFSETSLYESGQVERGLQVLKDKNETYEKDGATWLRSTAYGDDKDRVLVKQDGTYTYLTPDISYHLDKFDRGHDRLIDVLGADHHGYIPRMRAAIQALGYDPARFNVQIIQMVSLFQGGEKVKMSKRTGKAVTLRELMEEVGVDATRYFFAMRSPDTHLDFDMDLAVSKSNENPVYYIQYAHARVCSILRQGEELGIPYSANTDLSPIASEKEYELLKAIGEFPGAVAEAATKQIPQRIANYAYDLAQALHSFYNVTRVIDTENKDLSAARLALMKATQMTIKNALALLGVEAPEKM
What are the official names of this protein?
Arginine--tRNA ligase, Arginyl-tRNA synthetase, ArgRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: CSRA_VIBC1
Sequence: MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYMRIQAEKGNGNVASGNY
What is the function of this protein?
A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability.  Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems.  Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA.  Its function is antagonized by small RNA(s).
What are the official names of this protein?
Translational regulator CsrA, Carbon storage regulator.
What is the protein family that this protein belongs to?
Belongs to the CsrA/RsmA family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLMU_HELPH
Sequence: MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILETAFSISDDVHLVLHHQQERIKEAVLERSKGVIFHTQIVEKYSGTGGAIMQEDKTPIPTKHERVLILNADMPLITKDALAPLLESQNNAIGLLHLADPKGYGRVVLENHQVKKIVEEKDANDEEKTIQSVNAGVYGFERKFLEKYLPKLHDQNAQKEYYLTDLIALGINENEKIDALFLEEECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYLEKGVSFKGECVLEQGVRLIGNCLIENAHIKAYSVIEESQIVNSSVGPFAHARPKSVICNSHVGNFVETKNAKLQGAKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRAPQINIENGYFKFFKKP
What is the function of this protein?
Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc).  The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.
What are the official names of this protein?
Bifunctional protein GlmU.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the transferase hexapeptide repeat family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TYSY_PEDPA
Sequence: MLEEQYLNLERYVLENGHLKGDRTQTGTLSTFGYQMRFDLSEGFPLLTTKRVPFGLIKSELLWFLKGDTNIRYLLQHNNHIWDEWAFKKWVESDEYQGPDMTDFGHRSLTDPEFNELYKIEKQRFTEQILEDDTFSAKYGDLGNVYGSQWRAWKTSTGETIDQISNVIDMIKNNPNSRRMIVSAWNPEDVPTSALPPCHSLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYALLTELIAKATGLEVGEFIHTIGDAHIYSNHLDQVKEQLERTPRPAPKLKFKQVHDSIFDYEPGDIVVEGYDPHPTIKAPVAV
What is the function of this protein?
Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product.  This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
What are the official names of this protein?
Thymidylate synthase, TS, TSase.
What is the protein family that this protein belongs to?
Belongs to the thymidylate synthase family. Bacterial-type ThyA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FIXA_AZOC5
Sequence: MHIVVCIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEAALALRDQHGGEVTVLTMGPPSAEDSLRKALTFGADRAVLLTDRFFAGSDTLATTYALATAVRKIGETFGAPDIVFTGKQTIDGDTAQVGPGIAKRLGLLQLTYVAKIANVDLAGRSIQVERRSEGGVQVLQTRLPCLITMLEATNEIRRGAMADALRAARAEVVIWSAKDAGVEDISKCGLRGSPTIVKRVFAPSARAEKATMVDFSETAPADALIAEIFKRQPKLEDDLAALARGY
What is the function of this protein?
May play a role in a redox process involved in nitrogen fixation.
What are the official names of this protein?
Protein FixA.
What is the protein family that this protein belongs to?
Belongs to the ETF beta-subunit/FixA family.
Protein: RL3_XANOM
Sequence: MTKKYSLGFVGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNKPAAGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKVDVERGLIAIHGAVPGAAGGDVIVRPASKA
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
What are the official names of this protein?
50S ribosomal protein L3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL3 family.
Protein: C76AN_BETVU
Sequence: MDHATLAMILAIWFISFHFIKLLFSQQTTKLLPPGPKPLPIIGNILEVGKKPHRSFANLAKIHGPLISLRLGSVTTIVVSSADVAKEMFLKKDHPLSNRTIPNSVTAGDHHKLTMSWLPVSPKWRNFRKITAVHLLSPQRLDACQTFRHAKVQQLYEYVQECAQKGQAVDIGKAAFTTSLNLLSKLFFSVELAHHKSHTSQEFKELIWNIMEDIGKPNYADYFPILGCVDPSGIRRRLACSFDKLIAVFQSIICERLAPDSSTATTTTTDDVLDVLLQLFKQNELTMGEINHLLVDIFDAGTDTTSSTFEWVMAELIRNPEMMEKAQEEIKQVLGKDKQIQESDIINLPYLQAIIKETLRLHPPTVFLLPRKADTDVELYGYIVPKDAQIKYLLTYGLLEEILMHGKMLIFFRPKDL
What is the function of this protein?
Inactive cytochrome unable to convert L-DOPA to cyclo-DOPA in the betalain pathway and producing a yellow mutant phenotype.  A frameshift replaces 108 amino acids of the active protein found in red beets (AC I3PFJ5) with 27 new residues followed by a stop codon.
What are the official names of this protein?
Inactive cytochrome P450 76AD1.
What is the protein family that this protein belongs to?
Belongs to the cytochrome P450 family.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.
Protein: NIFW_METCA
Sequence: MNPVLQRLQSFSAAEEFLDFFGVEYEPSVVHVNRLHILKRFNQYLNRSPVPDDMDEVTAMATCKALLKQAHDDFVKSTAAQEKVFKVFQDQDGKSISLDSLKASLATRGQRA
What is the function of this protein?
May protect the nitrogenase Fe-Mo protein from oxidative damage.
What are the official names of this protein?
Nitrogenase-stabilizing/protective protein NifW.
What is the protein family that this protein belongs to?
Belongs to the NifW family.
Protein: NADE_ORYSI
Sequence: MRLLRVATCNLNQWAMDFDTNLRNVKESIARAKAAGAAVRVGPELELTGYGCEDHFLEQDTAAHAWECLKDILSGGYTDGILCSIGMPVIFKSVRYNCQVFCLNSKIVMIRPKISLANDGNYREFRWFSAWTFKDALVDFQLPLDISEVTSQDTVPFGYGFIQFLDVSLASETCEELFTANAPRIDLALNGVEVFVNASGSHHQLRKLSLRIDSMRNATLACGGVYMYANQQGCDGGRLYYDGCCCIAVNGDVVAQGSQFSLKDVEVLDALVDLDAVSSYRASVSSFREQASHRTKVPFVKVPYKLCKPFQSGMVPTGPVEVMYHRPEEEIAFGPSCWLWDYLRRSRASGFLLPLSGGADSSSVAAIVGCMCQLVVKDIENGDEQVKADAMRIGQYKDGEFPKDSRELAKRLFYTVYMGTENSSEGTRSRAKMLAEEIGSFHLDVPIDSIVSALLSLFERLTGKRPRYKVDGGSNTENLGLQNIQARIRMVLAFMMASLMPWVHNKSGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSVSKQDLRAFLRWAAVHLHYSSLAEVEAAPPTAELEPIRADYNQLDEVDMGMTYEELSIYGRLRKIFRCGPVSMFQNLCHRWCGTLSPSEVADKVKHFFKYYAINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVQDMDKDGKWVNSTEGELRRRKGVRSAEGGGMGVVAVGSANPSAGS
What are the official names of this protein?
Glutamine-dependent NAD(+) synthetase, NAD(+) synthase [glutamine-hydrolyzing], NAD(+) synthetase.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the NAD synthetase family.
Protein: PINS_LAVPL
Sequence: MSSISMHAGPLNISAANNHHPSWDRRVSKPRRVAAKHLGLRLSCSLQLDGKPLDETRRSANYQPSAWDFNFIQSLHNQYKEDKYVTRHTELTAQVKMLLEEETDAVQQLDLIEDLKNLGINYLFKDKIQQILNHIYNQHRCFQNNQVEGNDLYFTALGFRLLRQHGFEVSQEVFDRFTNEEGTDFNPSLIDDTKGLLQLYEASFLLREGEDTLELARQFSTKLLQKKVDEDGDREVGDNLLVWIRHSLELPLHWRIHRIEARWFLDAYATRHDMNPIIFELAKLDFNITQATQQEELRDLSRWWNSAGLVEKLSFARDRVVESYFWAIGTLEPRQYGYQRKLVAKIIALISVVDDVYDIYGTLDELKLFTDVMRRWDAESFDQLPYYMKICYLIINNFIFELAYDILKDKGFNSLSYLQRSWLDVVEGYFTEAKWYYSGYTPNLEEYLKNAKITVTCPMILSQIYFTIASSIEKPELESMYKYHDILYLSGLLLRLPDDLGTALHELKRGDAPKAMQCYMKEKNVPEKEAREHVRFLIREASKQMNTVSAADCPFPDDFVAAAANLGRVANFVYVDGDGFGDQHSKMLQQIAALMFEPYD
What is the function of this protein?
Monoterpene synthase involved in the biosynthesis of volatile compounds widely used in aromatherapy and folk medicine, and present in culinary herbs (PubMed:24943828).  Mediates the conversion of (2E)-geranyl diphosphate (GPP) into alpha-pinene and, as minor compounds, into alpha-phellandrene, limonene and alpha-terpinolene (PubMed:24943828).
What are the official names of this protein?
Alpha pinene synthase, chloroplastic, LpPINS.
What is the protein family that this protein belongs to?
Belongs to the terpene synthase family. Tpsa subfamily.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: CP126_MYCTU
Sequence: MTTAAGLSGIDLTDLDNFADGFPHHLFAIHRREAPVYWHRPTEHTPDGEGFWSVATYAETLEVLRDPVTYSSVTGGQRRFGGTVLQDLPVAGQVLNMMDDPRHTRIRRLVSSGLTPRMIRRVEDDLRRRARGLLDGVEPGAPFDFVVEIAAELPMQMICILLGVPETDRHWLFEAVEPGFDFRGSRRATMPRLNVEDAGSRLYTYALELIAGKRAEPADDMLSVVANATIDDPDAPALSDAELYLFFHLLFSAGAETTRNSIAGGLLALAENPDQLQTLRSDFELLPTAIEEIVRWTSPSPSKRRTASRAVSLGGQPIEAGQKVVVWEGSANRDPSVFDRADEFDITRKPNPHLGFGQGVHYCLGANLARLELRVLFEELLSRFGSVRVVEPAEWTRSNRHTGIRHLVVELRGG
What are the official names of this protein?
Putative cytochrome P450 126.
What is the protein family that this protein belongs to?
Belongs to the cytochrome P450 family.