PharMolix/UniProtQA huggingface dataset:
Protein: END4_EXIS2
Sequence: MKIGSHVSLSGKKMLLGASEEAASYGATTMMVYTGAPQNTRRKPISDLRIPEALLHMEENGIEEIVVHAPYIINLGNTTKPETFELAVSFLGEEIRRAEALEKAKHIVLHPGAHVGAGEEVGIKRIIEGLNEVLTGDEKVKIALETMAGKGSEIGKTFEEIAAIIAGVTHNDRLSVCLDTCHVHDAGYDLIHDLDGVLESFDRIVGINRLGVIHVNDSKNIRGAKKDRHENIGFGEIGFDPLHRIVHHRDLAHLPKILETPYIGLDPRKKVAPYREEIAMLRSGNFDAEWRLPLIGTSI
What is the function of this protein?
Endonuclease IV plays a role in DNA repair.  It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.
What are the official names of this protein?
Probable endonuclease 4, Endodeoxyribonuclease IV, Endonuclease IV.
What is the protein family that this protein belongs to?
Belongs to the AP endonuclease 2 family.
Protein: PAND_ACIAD
Sequence: MLSRLLKCKIHRAVVTHAELHYEGSCAIDGVLMDLAGIREYEEIHVWNVTNGKRFTTYAIRGEDHSGIISVNGGAAHQAEVGDLVIIATFGDFTEVEANAHKPRLVYANPDNTVNHTANCIPVQVA
What is the function of this protein?
Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
What are the official names of this protein?
Aspartate 1-decarboxylase, Aspartate alpha-decarboxylase.
What is the protein family that this protein belongs to?
Belongs to the PanD family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RRF_RICFE
Sequence: MDTETLKKNLQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTINVQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDTKISLRNIRRDGNEELKKLEKDNIIAKDEHHSLSEQVQKLTDDYSSKVDSAIKQKEQEIMTV
What is the function of this protein?
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis.  May increase the efficiency of translation by recycling ribosomes from one round of translation to another.
What are the official names of this protein?
Ribosome-recycling factor, RRF, Ribosome-releasing factor.
What is the protein family that this protein belongs to?
Belongs to the RRF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GATB_RHIEC
Sequence: MTLVDVRTPDPKRFIPGATGDWEVIVGMEVHAQVLSNSKLFSGASTEFGKPQNSNVSLVDAAMPGMLPVINEECVKQAVRTGLGLKAEINKRSVFDRKNYFYPDLPQGYQISQYKDPIVGEGRIVISLGPDRQGQFEDIEIGIERLHLEQDAGKSMHDQHATMSYVDLNRSGVALMEIVSKPDMRSSDEAKAYMTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGEPFGTRCEIKNVNSIRFIGQAIEYEARRQIGILEDGGEIEQETRLFDPNKGETRSMRSKEDAHDYRYFPDPDLLPLEFDDAFIKTLEADLPELPDDKKERFVRELGLSVYDASVLVSEKAIADYFEAVAAGRDGKTAANWVINDLLGALNRTGKDIEQTPVSPAQLGAIIDLIKAGTISGKIAKDLFEIVLTEGGDPAEIVELRGMKQVTDTGAIEKAVDEIIAANPEQVEKVKAKPTMAAWFVGQVMKATGGKANPQAVQALVKAKLGIEE
What is the function of this protein?
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases.  The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Asp/Glu-ADT subunit B.
What is the protein family that this protein belongs to?
Belongs to the GatB/GatE family. GatB subfamily.
Protein: RPOA_CUSRE
Sequence: MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLTKGQADTIGIAMRRALLAEIEGTRITRVKFANTSHEYSTIAGIQESVHEILMNLKEIVLRSNLYGTCDASISIKGPGYVTAEDIILPPHVEIVDSTQHIAWLTEPINFFIGLKIERNHGYFIKTHANFEDGSYPIDALFMPVRNANHSINSYGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHMEEENLHLEDADHTIPLSPFTVYDKVAKLRKNKKKLSLESIFIDQLEFPPKIYNCLKKSNIFTLLDLLNNSQEDLIKIEHFHLEDVKQILGILGKHFALDLPKNLN
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit alpha, PEP, Plastid-encoded RNA polymerase subunit alpha, RNA polymerase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase alpha chain family.
What are the subcellular locations of this protein?
Plastid.
Protein: MDH_MAGSA
Sequence: MARKKIALVGSGNIGGTLAHLIGLKELGDVVMFDIAEGIPQGKGLDILESTPVEGVDCRYSGANDYSAIAGADVVIVTAGVPRKPGMSRDDLVGINLKVMAAVGEGIKKNCPGAFVICITNPLDVMVWALQHYSGVPANMIVGMAGVLDSARFRTFLCEEFNVSVEDVTAFVLGGHGDTMVPLVRYSTVAGIPLPDLVKMGWTTQEKLDQIVQRTRDGGAEIVNLLKTGSAYYAPAASGVAMAEAFLKDKKRVLPVATLVKGGTYGQPDDVFVGVPVVIGEGGVERIVEIELNAAEQAEFNKSADAVRGLVKVAKGLMG
What is the function of this protein?
Catalyzes the reversible oxidation of malate to oxaloacetate.
What are the official names of this protein?
Malate dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the LDH/MDH superfamily. MDH type 3 family.
Protein: TRMN6_CROS8
Sequence: MSQPKTPLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAKAQRVLDIGAGSGLLTLMLAQRTEDTVTLDAVELDAQAAEQARENIDASPWAARIQVHSADIQTWTQQQTQRYELIVSNPPYYDKGVACATPAREQARYTTTLDHGTLLACAAQLITEEGFFCVVLPESSGEAFSRLAGEQGWHLRLRTDVAENAGKLPHRVLLAFSPSPGECFCDDLLIRGPDQHYSPAYCALTEAFYLFM
What is the function of this protein?
Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
What are the official names of this protein?
tRNA1(Val) (adenine(37)-N6)-methyltransferase, tRNA m6A37 methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: BETT_ECO57
Sequence: MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA
What is the function of this protein?
High-affinity uptake of choline driven by a proton-motive force.
What are the official names of this protein?
High-affinity choline transport protein.
What is the protein family that this protein belongs to?
Belongs to the BCCT transporter (TC 2.A.15) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: GCST_MYCLB
Sequence: MTDAPELLKGPLEDRHRELGANFAEFGGWLMPVSYAGTVSEHSATRNAVGLFDVSHLGKALVRGPGAAQFVNSVLTNDLGRIRPGKAQYTLCCSESGGVIDDLIAYYVDDDEIFLVSNAANTAAVVDALQAVVPAGLTIINQHRSHAVLAVQGPRSTDVLGELGLPTGIDYMGYVDASYAGVPVRVCRTGYTGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLRTEMGYPLYGHELSLDISPLQARCGWAIGWKKDAFLGRDALLAEKAAGPRRLLRGLRMAGRGVLRPGLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDSEAAVQDGQQIIVDVRGRAVECEVVRPPFIEVKTR
What is the function of this protein?
The glycine cleavage system catalyzes the degradation of glycine.
What are the official names of this protein?
Aminomethyltransferase, Glycine cleavage system T protein.
What is the protein family that this protein belongs to?
Belongs to the GcvT family.
Protein: WTF18_SCHKA
Sequence: MKNNYTSLKSPLDEEDELKTDHEIDLEKGLLPEYNSEEEGTLPLYSDISKLANPVPEDSSTGPTEIANPNVERRQEFKDSHPNIYFLLRLLISVLAVSVVFFTAWVCVNPLEKSIFGKVAFSVTIGITCPILFIATFCFFETWTQAVAQCIKVTVIFLAQCVKVTVIFLAQCVKVTAVFLAKCVKVIAVGLYNSKKDLVVTIWLAWVVICFILFGCVKDGRLNLNKALICSTCSISAALFFILLLVCIPIWTLKHMLFGLFQVLGVQSCVVIVTKGLMYLFDKHIDATGYEIEASSLFVIGNFLFFYEMERPGALKRMPKFIGNGIASFLGGLGNAFGGIGNAIGRIGNAFRGANDNNDIPLGEMDVESEV
What is the function of this protein?
Acts as a suppressor component of the dual wtf meiotic drive system, and can suppress but not confer meiotic drive by compatible poisons (PubMed:30475921).  Wtf meiotic drive systems promote unequal transmission of alleles from the parental zygote to progeny spores by encoding a poison and an antidote from the same locus; the poison is trans-acting and forms toxic aggregates in all spores within an ascus, wherease the antidote is spore-specific and targets aggregates for degradation by the vacuole (By similarity).  Meiotic drive by wtf systems therefore lead to poisoning of all progeny that do not inherit the dual poison/antidote allele, or express a compatible antidote (By similarity).
What are the official names of this protein?
Meiotic drive suppressor wtf18.
What is the protein family that this protein belongs to?
Belongs to the WTF family.
What are the subcellular locations of this protein?
Spore membrane; Multi-pass membrane protein. Vacuole membrane; Multi-pass membrane protein.
Protein: TCTP_IXOSC
Sequence: MLLFKDILTGDEMFTDSVKYKLVDDCIFEIECEHVTRKVGEVALDGANPSAEEVEEGTEEGTESGLDLVLNMRLVETGFSKTDYKNYLKTYTKALMDKWKEDGKSEAEVNEAKSKLTEAVKKVLPRIGDMQFFLGESSNPDGIVALLEYRPNKSGGETPVVMFFKHGLLEEKQ
What is the function of this protein?
Involved in calcium binding and microtubule stabilization.
What are the official names of this protein?
Translationally-controlled tumor protein homolog, TCTP.
What is the protein family that this protein belongs to?
Belongs to the TCTP family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y973_PYRAB
Sequence: MMAMFEEVEVEAYVYPTEDINKVKKAMLNLVPGLKFEAFDKGEYMILVGKTRDKRALQRLYELFRGQQILDTARMMLEEGYFGEEIIIKVHKQVAYAGKVNFNEESPLGPITITIRTKEPQKLMKWLAPRTKDGVPIE
What are the official names of this protein?
UPF0201 protein PYRAB09730.
What is the protein family that this protein belongs to?
Belongs to the UPF0201 family.
Protein: GOGC1_ARATH
Sequence: MASWLKAAEDLFEVVDRRAKSVVEDLSEEQNDLQLPASGRKGSQGKRTSSKKKKLVKEESSNKRDSSGDQSGPGVSQSEVPPSKSSVSTDETSSSGPVLLTREIHPTDADVQSVLSLPLSVADTKSDDAAVVAQESIVDGDRSESKHADGDIPNDSLVQPSPSLPDKEIEVVVSENLMDAPKNGTQRELDDSSKRDVENLDSVVHAPSVNEGNVAQSTGDEVKVGTSINLEKEQEPKVPVTSTNLKREQDRRADTTSMKIQDQLEEAQGLLKATVSTGQSKEARLARVCAGLSSRLQEIKAENAQLEELLTAEQELTKSYEASIRHLQKDLSAAKSEVTKVESSMVEALAAKNSEIETLVSAMDALKNQAALNEGKLSSLQGDMESIMRNRELAETRMMQALREELATTERRAEEERSAHNATKMAAMERERELEHRAVDASTALVRIQRIADERTAKVADFEQKVALLEAECTSLNQELQDMEVRARRGQKKAPDEANQVIQIQAWQDEVDRARQGQRDAEEKLSLMEAEMQKLRVEMAAMKRDAEHYSRQEHTELEKRYRELTDLLYYKQTQLETMASEKAAAEFQLEKEVKRLHEAQVEVEKSRVSRRASATWEEDSEIKTLEPLPLYHRHMATASTQLQNAVKLLDSGAVRATRFLWRYPIARMFLLFYLVFVHLFLMYLIHRLQEQAEAQEVAAMTNNVFRL
What is the function of this protein?
Golgi matrix protein playing a role in tethering of vesicles to Golgi membranes and in maintaining the overall structure of the Golgi apparatus.
What are the official names of this protein?
Golgin candidate 1, AtGC1, Golgin-84.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Single-pass type II membrane protein. Note=Probably located to cisternal rims of cis or medial Golgi.
Protein: SYI_ALISL
Sequence: MSDYKETLNLPETGFPMRGNLANREPVMLKHWYDEDLYGEIRKAKKGKKSFILHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKKGKPGQKISAAEFREECRKYAAVQVEGQKESFKRLGIMGEWDKPYRTMDFGTEANIIRSLGKIADQGHLLKGFKPVHWCTDCGSALAEAEVEYQDKFSPSIDVRFVAADEAATLAKFSTPEGHQGEGELSVVIWTTTPWTLPANRAVALHADLEYVLVQVEAHGEQKAERLILASELAKSVMDRAGIEHFHNLGFAKGSELELLQFNHPFYGFTVPAILGEHVTVDSGTGIVHTAPGHGQEDFVVGKKYDLEIANPVGSNGVYLPDTELFAGQHVFKANDSVIDVLKEKGALLHHHAIEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALEEVKSVEWMPEWGQSRIEGMIEGRPEWCISRQRTWGVPIALFVHKETSELHPDSLELIEKVAKLVEEKGIQAWWDLDIAELMGEDDATKYEKVLDTLDVWFDSGVTHFSVVDSREEYNFPQEERTHSADLYLEGSDQHRGWFQSSLISSVAMKGKAPYRQVLTHGFVVDGNGRKMSKSVGNVVAPKDVTNKLGADILRLWVASTDYTNEVAVSDEILKRSADAYRRIRNTARFFLANLNGFNPETDIVPAEEMVALDRWAVGRAFAAQEEIIKSYDEYNLHEVTQRLMHFCSIEMGSFYLDVIKDRQYTAKKSGHAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGKRDKFVFTGEWYEGLFDLAEGEDLNNEFWSKIQAVRASVNKLLEAARGEKVIGGSLQAEITLYADDALAAKINKLDNELRFVLLTSSATVKPLSEKSDSAKATELDGLFVDVAASEAAKCERCWHHVADVGTIEGHEEVCGRCVSNVEGEGEERKFA
What is the function of this protein?
Catalyzes the attachment of isoleucine to tRNA(Ile).  As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities.  One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP.  The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
What are the official names of this protein?
Isoleucine--tRNA ligase, Isoleucyl-tRNA synthetase, IleRS.
What is the protein family that this protein belongs to?
Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL17_KLEP7
Sequence: MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRAEPKAEAAAE
What are the official names of this protein?
50S ribosomal protein L17.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL17 family.
Protein: AVE_DROME
Sequence: MGEETINSTQNKTRTKTTRPKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRLKTDIMEIRDMERLNIY
What is the function of this protein?
Required for normal photoreceptor differentiation between Ras and Raf for EGFR signaling in the eye and for mitogen-activated protein kinase phosphorylation.  Probably acts together with Cnk to promote Raf activation, perhaps by recruiting an activating kinase.
What are the official names of this protein?
Protein aveugle.
What are the subcellular locations of this protein?
Cytoplasm. Membrane; Peripheral membrane protein.
Protein: SYFB_BIFLO
Sequence: MPMIDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKTINWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLPGDFKIEPRKTYGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEINITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNPIHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHAYDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGLYGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELMAKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGNGEFAVTAPSWRPDLNEPCDLVEEIARLVGYDQIPITVPPAPVEGLVGLTPDQQRRRRVADELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLATTVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVAGILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADDVPVQWHPGRAARVMVGDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPISTFPPVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRSPSKTLSAEDSDAIRKAIVAEAAEIGAQLRA
What are the official names of this protein?
Phenylalanine--tRNA ligase beta subunit, Phenylalanyl-tRNA synthetase beta subunit, PheRS.
What is the protein family that this protein belongs to?
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RUTA_ECOLU
Sequence: MQDAAPRLTFTLRDEERLMMKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
What is the function of this protein?
Catalyzes the pyrimidine ring opening between N-3 and C-4 by an unusual flavin hydroperoxide-catalyzed mechanism, adding oxygen atoms in the process to yield ureidoacrylate peracid, that immediately reacts with FMN forming ureidoacrylate and FMN-N(5)-oxide.  The FMN-N(5)-oxide reacts spontaneously with NADH to produce FMN.  Requires the flavin reductase RutF to regenerate FMN in vivo.
What are the official names of this protein?
Pyrimidine monooxygenase RutA.
What is the protein family that this protein belongs to?
Belongs to the NtaA/SnaA/DszA monooxygenase family. RutA subfamily.
Protein: RL3_SPHAL
Sequence: MRTGVIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKNVAKPQRGAYGKAEVEPKAKLVEFRVADDATLDVGAELSADHFVAGQMVDIQGVTQGKGFAGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIVRTDAERGLLFVKGSVPGSKGGWLLVRDAVKLPRHPEAPYPASIKSAANTNTAPADAPVETPAEEAVVDTAATDGAQES
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
What are the official names of this protein?
50S ribosomal protein L3.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL3 family.
Protein: Y2406_OCEIH
Sequence: MKLRSFIGSRVIKTGIAVLLTAYICEWIGWSPVFAVITAIVTIEPTVSDSIRKGLIRFPASAIGAAYAVLFIALFGNSPVTYALSAVFTITTCFRLKLHDGLLVATITSVAMVDVIHSNYVMEFFIRLFTTTIGLSVSTLVNMFLLPPDYQKNIQTKVSSIAQELGKQIQGIYYCLLHVDEINNESKYLDKLLELDKLIIRAEILSRYQTNDSKYHFTENNQEKFKDIKTQLHFLRIMHYHLTNVIDHPKEQINIDEKEKNELLNVSSYIAQVLKKELAYNSDDIQDKRTRLNELFWKEKHRTHNLSSDMLNKLPFELVMLYELISILELTEDYFYTANLHKENAN
What are the official names of this protein?
UPF0421 protein OB2406.
What is the protein family that this protein belongs to?
Belongs to the UPF0421 family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: RECF_SYNJA
Sequence: MYLRFLHLWHFRNYRDQKISFEAPKTILVGENAQGKTNLLEAVELLATLRSRRAGRDRELVQQGAEKARIAATVERLGVAHELAMELRSQGGRSLRVNGQGLRRQSDFLGQVSAVVFSSLDLELVRGAPEARRTWLDGVLLQLEPAYLGLVEQYRQILKQRNALLKQDPLAAGDKVPQMAFWDAQLATLGSRILRRRARLLQRLEPLAARWHQAISGGRETLSLTYRPQVPLPDPQADPKVVQAQFLAAIRAKAAAEQALGTSLVGPHRDEVELGIDGVAARAYGSQGQQRTLVLALKLAELELIEQVKGDPPLLLLDDVLAELDLHRQNQLLEAIQERVQTLVTTTHLGSFDAAWLQGAQILQVHQGQIAPSPASLPLA
What is the function of this protein?
The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility.  RecF binds preferentially to single-stranded, linear DNA.  It also seems to bind ATP.
What are the official names of this protein?
DNA replication and repair protein RecF.
What is the protein family that this protein belongs to?
Belongs to the RecF family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UDG_PSEAE
Sequence: MRLCVIGAGYVGLVTAACFAEMGNQVRCVERDRERVARLRRGEMPIYEPGLESILRDQLDAARLTFTASLAEGLADAEVVFIAVGTPCGEDGSADLSHVLAVAEQLGAQLRQACIVVNKSTVPVGTAERVEEIIRLGLARRRKRFRVAVASNPEFLKEGSAVDDFRRPDRVIIGSAETQAGETLRQLYAPFLRNHERVLLMGRREAEFSKYAANAFLATKISFMNEMAGLCALTGVDIEDVRRGMGSDKRIGTHFIYAGCGYGGSCFPKDVRALIRSAEQQGYDSQILRAVEARNARQKELLFETLGELFQGRWQGRTVALWGLAFKPGTDDLREAPSLVLLEALLRHGVRVRAHDPVANAGVAARYPEAVACARLTLHDSPYAAVEGADALVLVTEWKQFRQPDFQKIRGSMRTPLLVDGRNLYAPARMAELGFIYQGIGRPRAGHCKASAA
What are the official names of this protein?
UDP-glucose 6-dehydrogenase, UDP-Glc dehydrogenase, UDP-GlcDH, UDPGDH.
What is the protein family that this protein belongs to?
Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
Protein: COX6B_DICDI
Sequence: MEGEQLQTAPYNPRFPQQNQTKHCWANYVDYYGCVKHYNGDNSKCQTFFNSMNSLCPAAWISEWDEQKAADLFPSDRV
What is the function of this protein?
Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water.  Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)).  The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
What are the official names of this protein?
Probable cytochrome c oxidase subunit 6B.
What is the protein family that this protein belongs to?
Belongs to the cytochrome c oxidase subunit 6B family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Peripheral membrane protein; Intermembrane side.
Protein: Y1907_LARHH
Sequence: MKITDWPASERPREKLLARGPEALSDAELLAILLRTGMAGKTVLDVARQLLLEAGSLGRLLSRPVTELVSSPGLGPAKACELAVVAELARRLLAEKLPVADALTSPQAVHDYLRLAYGMRVQEVVLLLCLDARNRLLAVEEVAHGTLTESRVYPREVVKAALRQHAVAVILAHNHPSGDSGPSLADRELTEALGRALALVDVRLLDHLVISRQGCTSFAECGWLPA
What are the official names of this protein?
UPF0758 protein LHK_01907.
What is the protein family that this protein belongs to?
Belongs to the UPF0758 family.
Protein: NUOC_NOCFA
Sequence: MSPDTPRGGDLHPPEPDAAATAGPEGTPPDTEPAAEVIGVRHGMFGIRGTGDTSGYGRLVRPVTLPGGTAPPYGGWFDEVVDRLRTALENSGTPFGSALEKIVVFRGELTLHVRREHLVTVARLLRDDPALRFELCLGVNGVHYPDDAGRELHAVYPLRSITHNRLLRVETCAPDTDPHIPSLFEVYPTTDWHERETYDFFGILFDGHPSLTRITMPDDWRGHPQRKDYPLGGIPVEYKGARIPPPDERRAYS
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit C, NADH dehydrogenase I subunit C, NDH-1 subunit C.
What is the protein family that this protein belongs to?
Belongs to the complex I 30 kDa subunit family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: DPB2_CANGA
Sequence: MFTSGKVLPTKIQPPLLRPMAYRVLSKKYGLSIKSDGLAALSDFIGSTFGMDWKRNPDTIKFLEVFATVWKQQERGLFVDSTGVKDVINELKEREKATLQESQNMASIPPKTKTYNNGGGKTTTIDRFLTKRPSPSDNDEGPLDQSIDDIPVSQATQIDEEELPMAQEISDQISSPARDQTPEEEFDNRILNWRDYFRIINTTDQKKFSYNPVKRQIFYQPPKDQLKSVLKIPNAQAKTDLFRTRYFLTRDRLLRNESFQSSHDTFNPLSSMIQLKNNINNNNQDDTPTGLSITQIKNLLGRDGQNFLILGVLKMNPKGQWSLEDASGSIDIDISQTLPSPGLFYIPGAIVLAEGIYYTVGHTFAVTSMTFPPGERRDKTLDHIGNLDLLGIHGTEKSSYIPRLDNEIKIRLHLLEQDLTHQKFVLLGGDLFLDDQHVMDGLKKVFTKLDQEAPTVIVLFGSFSSFPVHAAMSSKNISSTTEYKNNFDSLAEMLSQFENIINHTHVVLIPGPHDPWVSLCSLGANGSLPQSSIPTHFSKRMNKICKNITWASNPTRIAYLSQEIVLFRDNFLELCKRHQILFPVVESKRAEDLAELEEQMANNSIDDTTILVDRIISEKQQLPAKVLESRKVVKTLLDQGHLSPFVDSIRPISWDMDHTLTLYPIPSTLILADMSSAAYDLTYNGCKTINPGKFIHKRQARYIQFQPYLKSVSQEEVFF
What is the function of this protein?
As accessory component of the DNA polymerase epsilon (DNA polymerase II) participates in chromosomal DNA replication.
What are the official names of this protein?
DNA polymerase epsilon subunit B, DNA polymerase II subunit 2.
What is the protein family that this protein belongs to?
Belongs to the DNA polymerase epsilon subunit B family.
What are the subcellular locations of this protein?
Nucleus.
Protein: LPXD_IDILO
Sequence: MSEYTLQQLADHVGGEVRGNSQLPILRVATLQSATGDAIAFLANSRYKSQLETTSAGAVIVSEKDDSDAIDNAIRVVNPYAAFARIAQLLDTTPKPAHGIAESAKIAPSATIGQNVSIGEYTVIDEGVIIGDNTSIGPHCYIGPETQIGAGCTLWSGVKIYHRCVIGDDCLFHSGSIIGADGFGWAPDNGKWLKIPQLGRVVIKDNVEIGASTTVDRGALDDTVISSGCIIDNQCQIAHNVFIDEDTAIAGCTVLAGSCRIGKRCMIGGASAINGHISVCDDVQIMGFAMVIKEITEPGVYASGIPASGHREWRRNGARFRQLDDLFKRVKELEKQADDNN
What is the function of this protein?
Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor.  Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
What are the official names of this protein?
UDP-3-O-acylglucosamine N-acyltransferase.
What is the protein family that this protein belongs to?
Belongs to the transferase hexapeptide repeat family. LpxD subfamily.