PharMolix/UniProtQA huggingface dataset:
Protein: COG6_PICST
Sequence: MDFVDFDSFSNDEITGEDNLPHPQPALSLPITSNIETIGKRISSLNTITRSLLKFEGTDEEEGESSSENASKENELAQKYAQMSLNFLKKEETQHGSDGKIANGVDGKSYNDFEHSKATLSTRLSRVLNDSLSETLLREIFSHLEDKYSSYDDSIDELIEPGVVGSMSRKKLRGKVENELIKNQSLVLKEYQPVIKQLKVVEDRLSKLNDLNKVTNDNIENKFKYSSEFNTKVKELNSEKRLINLKKNLLINFKAKFTLNEYEEFVLDSGDINDEFFTVLKKAEEINANCSILLSIENPQLGLKIMSKSNHLINRSVERIINFTNKTLSNLYSLNSKARLRTLHQCMRYLKNKLNYFSNVVNTFVDSRAKVLVDDFLSQIQGNLDSNGNVSTFKRRSSSISSETSSRPIYVSAHDPIRFIGDLLAYVHSLVVNESDTIISIFTFETSESEVEKKEFETIIKDIIDKILKSLVKPVKSKVTQIISAETKLSTSYSIFNLVELYSMMFTKQLSDTSEVSIALKSLVKASQDRLASIISNRLASIRTSNSAQLELNLDLQPPEWIIEFYSDLLPILDQTTTDTIFNFTAEENEEFMKLLVDEPIEIFFEHIGSNKIFESKKDQLILKHNFLDLILSKLLPITIVSDKVIEINEMINTLTQELTQLQLEAILKECGLYDYYNIVNMICPFSDDFFDTSIYEPIKENQLYNKSELLKINEIIQSYIPNALLDIQSSLLKLNPPSIVNEVTTNASLEFVKYYGKLSQINSAFLQETFTWSDFEIATLLGVDEDYTEFIKLVANSG
What is the function of this protein?
Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking.  COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events (By similarity).
What are the official names of this protein?
Conserved oligomeric Golgi complex subunit 6, COG complex subunit 6, Component of oligomeric Golgi complex 6.
What is the protein family that this protein belongs to?
Belongs to the COG6 family.
What are the subcellular locations of this protein?
Golgi apparatus membrane; Peripheral membrane protein.
Protein: QUEF_STAAB
Sequence: MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYPEKIDNR
What is the function of this protein?
Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
What are the official names of this protein?
NADPH-dependent 7-cyano-7-deazaguanine reductase, 7-cyano-7-carbaguanine reductase, NADPH-dependent nitrile oxidoreductase, PreQ(0) reductase.
What is the protein family that this protein belongs to?
Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: LPXA_RICB8
Sequence: MSNSNIHPTSIIAEGAKLGKNVKVGPYCIIGPEVILHDNVELKSHVVIEGITEIGESTVIYPFASIGQPPQILKYNNERSNTIIGSNNIIREYVTVQAGSQGGGMITRIGNNNLFMVGVHIGHDCKIGNNVVFANYVSLAGHIEVEDYVIIGGLSAVHQYARIGKHSMIGGLSPVGADVIPFGLASGKRAVLEGLNLVGMNRKGFDKAESLNALKIVQEIFLGEGNFADRIKQAQEKYKNNTIVMQIIDFLEHGSNRSFCSFEKTMSLRGELQSNLTKQPN
What is the function of this protein?
Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
What are the official names of this protein?
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, UDP-N-acetylglucosamine acyltransferase.
What is the protein family that this protein belongs to?
Belongs to the transferase hexapeptide repeat family. LpxA subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SELO_PSEMY
Sequence: MKKLDQLTFDNRFARLGDAFSTEVLPEPIEQPRLVVASSDAMALLDLDPAEAQREEFAELFAGHKLWGEAEPRAMVYSGHQFGGYTPRLGDGRGLLLGEVVNAAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEHLHALGIPSSRALCVTTSDTPVWREKQERAAMVLRLAPSHVRFGHFEYFYYTRQHEQLKVLGEHVLANHFPQCLTQDEPWLAMFREVLERTAAMIAHWQAYGFCHGVMNTDNMSILGITFDYGPYAFLDDFDANHICNHSDDTGRYSFSNQVPIAHWNLAALAQALTPMIEVEKLRETLELFLPLYQAHYLDLMRKRLGLTSAEDDDEALVQRLLQLMQQGKATDYSLFFRQLGEQAPADALQVVRNDFVDLAGFDAWGRDYLARCEREGQQQDERRARMHAVNPLYILRNYLAQQVIEAAEAGDYGPVRELHAVLSRPFDEQPGMQRYAQRPPEWGKHLEISCSS
What is the function of this protein?
Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).
What are the official names of this protein?
Protein adenylyltransferase SelO.
What is the protein family that this protein belongs to?
Belongs to the SELO family.
Protein: CYSD_METNO
Sequence: MSAALKPLAQLDTPRLTHLQRLEAESIHIMRETVAETENPVMLYSIGKDSSVLLHLALKAFAPGRLPFPLLHVDTTWKFREMIAFRDARAKELGLDLLVYTNPDGLARGIGPVSHGSEVHTDVMKTQALRQALDKYKFDAAFGGARRDEEASRAKERIVSLRTAQHRWDPKRQRAEPWHLYNLKKKRGESLRVFPLSNWTELDIWLYIEQERIPIVPLYFSAERPVVRRDGQLIMVDDERLPLEPGETPELRKVRFRTLGCYPLTGAVESDAATLPEIIGETLAARTSERQGRVIDKDGAGAMERKKQEGYF
What is the function of this protein?
With CysN forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway.  APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.
What are the official names of this protein?
Sulfate adenylyltransferase subunit 2, ATP-sulfurylase small subunit, Sulfate adenylate transferase, SAT.
What is the protein family that this protein belongs to?
Belongs to the PAPS reductase family. CysD subfamily.
Protein: RUVB_CLOBM
Sequence: MENRMVTPFDVEDDKEQYSLRPTTLKEYIGQKKVKANLDIFIKAAKKRNESLDHVLFYGPPGLGKTTLANIIANEMTGNLKVTSGPAIEKAGDLAAILTSLTDYDVLFIDEIHRLNRSIEEILYPAMEDYALDIVIGKGAAAKSIRLDLPKFTLIGATTRVGLLTSPLRDRFGMLCAMEFYTDEELMEIVVRSAAILNVNICREAAFEIGKRSRGTPRIANRLLKRVRDYCDVKHDGDIDLQGAKAALDLLEVDKEGLDKIDNKILEAIIFNFKGGPVGLETLAYFIGEELDTIEDVYEPYLIQKGFIMRTPRGRVASEKAYNHFGVTKKEEKDNQVSIFNK
What is the function of this protein?
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR).  RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure.  The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex.  RuvB forms 2 homohexamers on either side of HJ DNA bound by 1 or 2 RuvA tetramers; 4 subunits per hexamer contact DNA at a time.  Coordinated motions by a converter formed by DNA-disengaged RuvB subunits stimulates ATP hydrolysis and nucleotide exchange.  Immobilization of the converter enables RuvB to convert the ATP-contained energy into a lever motion, pulling 2 nucleotides of DNA out of the RuvA tetramer per ATP hydrolyzed, thus driving DNA branch migration.  The RuvB motors rotate together with the DNA substrate, which together with the progressing nucleotide cycle form the mechanistic basis for DNA recombination by continuous HJ branch migration.  Branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves cruciform DNA.
What are the official names of this protein?
Holliday junction branch migration complex subunit RuvB.
What is the protein family that this protein belongs to?
Belongs to the RuvB family.
Protein: TX41B_ETHRU
Sequence: MTRHLIFAAVLLVCLFVCWNAVGAQDARSAFSSEETAQDQHVMEERIFINPAGNREKNACMENCRSSPNCKNYEFCSK
What are the official names of this protein?
U-scoloptoxin(04)-Er1b, U-SLPTX(04)-Er1b, U-scoloptoxin-Er1.1a2b, U-SLPTX-Er1.1a2b.
What is the protein family that this protein belongs to?
Belongs to the scoloptoxin-04 family.
What are the subcellular locations of this protein?
Secreted. Note=The mature toxins are clearly liberated from the multidomain precursors in the venom gland prior to venom expulsion and not by venom proteases upon secretion.
Protein: RL34_METS4
Sequence: MKRTYQPSKLVRKRRHGFRARMATVGGRKVIAARRARGRKRLSA
What are the official names of this protein?
50S ribosomal protein L34.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL34 family.
Protein: PAGP_ECOLW
Sequence: MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTRQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
What is the function of this protein?
Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
What are the official names of this protein?
Lipid A palmitoyltransferase PagP, Lipid A acylation protein.
What is the protein family that this protein belongs to?
Belongs to the lipid A palmitoyltransferase family.
What are the subcellular locations of this protein?
Cell outer membrane.
Protein: NIFH_METS4
Sequence: MAGLRQIAFYGKGGIGKSTTSQNTLAALVEMGQKILIVGCDPKADSTRLILNAKAQDTVLSLAAEAGSVEDLELEDVLKIGYRGIKCVESGGPEPGVGCAGRGVITSINFLEENGAYEDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHSGGVRLGGLICNERQTDRELDLAEALAKRLNSQLIHFVPRDNIVQHAELRRQTVIEYAPASAQAAEYRKLAQKVHENGGKGTIPTPITMEELEQMLLDFGIMKTEEQQLAELAAKEAAKAAAAVH
What is the function of this protein?
The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
What are the official names of this protein?
Nitrogenase iron protein, Nitrogenase Fe protein, Nitrogenase component II, Nitrogenase reductase.
What is the protein family that this protein belongs to?
Belongs to the NifH/BchL/ChlL family.
Protein: RL20_NITEU
Sequence: MPRVKRGVTAKARHKKILKLAKGYRGRRKNVYRIAKQAVMKAGQYAYRDRRQRKRQFRTLWIARINAAARELGMTYSTFMNGIRKAGISLDRKILADLAVFDKVAFEKITNQVKAGLAN
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
Protein: CAV2_RABIT
Sequence: MGLETEKADVQLFMDDDAYSHHSGVDFADPEKFPDTGPDRDPHGLNSHLKLGFEDVIAEPVTTHSFDKVWICSHALFEISKYVLYKFLTVFLAIPLAFAAGVLFAVLSCLHIWILMPFVKTCLMVLPSVQTIWRSVTDVVIAPLCASIGRSFSSVGLQLSHD
What is the function of this protein?
May act as a scaffolding protein within caveolar membranes.  Interacts directly with G-protein alpha subunits and can functionally regulate their activity.  Acts as an accessory protein in conjunction with CAV1 in targeting to lipid rafts and driving caveolae formation.  Positive regulator of cellular mitogenesis of the MAPK signaling pathway.  Required for the insulin-stimulated nuclear translocation and activation of MAPK1 and STAT3, and the subsequent regulation of cell cycle progression (By similarity).
What are the official names of this protein?
Caveolin-2.
What is the protein family that this protein belongs to?
Belongs to the caveolin family.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm. Golgi apparatus membrane; Peripheral membrane protein. Cell membrane; Peripheral membrane protein. Membrane, caveola; Peripheral membrane protein. Note=Potential hairpin-like structure in the membrane. Membrane protein of caveolae. Tyr-19-phosphorylated form is enriched at sites of cell-cell contact and is translocated to the nucleus in complex with MAPK1 in response to insulin. CAV1-mediated Ser-23- phosphorylated form locates to the plasma membrane (By similarity).
Protein: S20AB_XENLA
Sequence: MESTTAFSAVTSALGIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETVGSVLLGAKVSETIRKGLIDVTMYNSTQELLMAGSISAMFGSAVWQLAASFLKLPISGTHCIVGATIGFSLVAKGQQGVKWIELLRIVLSWFISPLLSGIMSALLFFFVKKFILCKADPVPNGLRALPVFYACTIGINLFSIMYTGAPLLGFDKVPLWGIILISVGCAVFCALFVWFFVCPRMKRKIECEFKSSPSESPLMNKKNRELHCPILKPDPDNIKLPVDGGIVAEVKVPILDMVTVSRTEERTVTFNMGDCDDPIEKEKLNSMETNIDQPMNGSVQLANGNHVQFSQTVSNEMNSSGQYQYHTVHKDSGLYKDLLHKLHLAKVGDCMGDSGDKPLRRNNSYTSYTMAICGMPLDSFRNWDAEARPDEAEKLTVHGADGKKRIRMDSYTSYCNAVADAHMDVEAEEQEEGCIEDVVTDRKSSSSSLEERHDQDKPEVSLLFQFLQILTACFGSFAHGGNDVSNAIGPLVALYLVYESGDVATKAATPIWLLLYGGIGICIGLWVWGRRVIQTMGKDLTPITPSSGFSIELASALTVVIASNVGLPISTTHCKVGSVVSVGWLRSKKAVDWRLFRNIFLAWFVTVPISGLISAGIMALFKYAILKV
What is the function of this protein?
Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport.
What are the official names of this protein?
Sodium-dependent phosphate transporter 1-B, Solute carrier family 20 member 1-B.
What is the protein family that this protein belongs to?
Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: YA_LACFM
Sequence: MDWKIDTSDLTATRYYAYSASDALVVLLRRICSPYATRRFDSSSCNKMSQTDYPQYEIKTGTDVSQNRDLSFDYMKKPTKSTAKVLRGVGVIDEWFAKRLLGPRGSNPDLPFAALLCRDELYREWITLIRMLTLVLKHVPKAKVKEAHDMILELYPNYRRRNIFIPEIKESDIHDIKNALRSLVRQLSSRTNILEWPEAAKYPTLFEELVREKRSQETQKTSSTKNLLNRRNARKRRRLSSDMAAERPAGKWKNRLRSTQ
What are the official names of this protein?
Uncharacterized protein A.
Protein: NDHK_CARPA
Sequence: MNSIEFPLLDRTTQNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIRSQQGNRCFTTNHKFLFVRSTHTGNYDQELLYQPSSTSEIPTETFFKYKSSVSSRELVN
What is the function of this protein?
NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone.  Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NAD(P)H-quinone oxidoreductase subunit K, chloroplastic, NAD(P)H dehydrogenase subunit K, NADH-plastoquinone oxidoreductase subunit K.
What is the protein family that this protein belongs to?
Belongs to the complex I 20 kDa subunit family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side.
Protein: Y996_METJA
Sequence: MLNLEKIEKLLEVGDYADIRINFGESNTITLKDGKIEEISSGFGNGVAVRVLYKNGWGFVTSNIVSEEEIEKLINKAYKMAKISNEYSEKEIILKDYKAIIDNYKMIGKINPTDVDIEEKKEIIIDTYKNMTDEKIKSISVSYSDVFGKRIFMISEGSRIEGEITRCIMYMNCVAKENGNLQYGAERTGGFGFEKIKDNYLNLALEAKNRALRLLKAKPCPKGKFKVILDPELAGVFIHEAVGHASEADLVLQNDSVFKDKLGERVGSEYVTVIDDATIEGAFGSYKYDDEGVEGKKTVIIENGILKTYLHSRETAGRMDAELTGNGRAEGLNKPIVRMSNTFIKPGDWSFEELLEDTKEGIFLKGSRGGQVDTGKGLFQFSAVEAYLIENGELTQVLKDAGLSGEILDILFKVDAVTKDFELSVGYCGKDGQSVPVGDGGGCVRTIATVS
What is the function of this protein?
Probable metalloprotease.
What are the official names of this protein?
Metalloprotease MJ0996.
What is the protein family that this protein belongs to?
Belongs to the peptidase U62 family.
Protein: WRK55_ARATH
Sequence: MYSYKKISYQMEEVMSMIFHGMKLVKSLESSLPEKPPESLLTSLDEIVKTFSDANERLKMLLEIKNSETALNKTKPVIVSVANQMLMQMEPGLMQEYWLRYGGSTSSQGTEAMFQTQLMAVDGGGERNLTAAVERSGASGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATPSTIPISSVTTGHSVDYGLAVVDMADVMFGSGGVGTNMDFIFPKNDPS
What is the function of this protein?
Transcription factor.  Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).
What are the official names of this protein?
WRKY transcription factor 55, WRKY DNA-binding protein 55.
What is the protein family that this protein belongs to?
Belongs to the WRKY group III family.
What are the subcellular locations of this protein?
Nucleus.
Protein: URE1_METSB
Sequence: MPVTMSRRAYAGMFGPTTGDKIRLADTELLIEVERDFTIYGEEVKFGGGKVIRDGMGQSQRSRAEGAVDTLITNVVILDHTGVVKADVGLKDGRIAAIGKGGNPDIQPGVTITIGPGTEIIAGEGKILTAGGVDTHIHFIAPQQIEEALCSGVTTMLGGGSGPAEGTKATTCTSGPWHMMRMMQAAESLPMNIGFFGKGNASKPAALIEMVEAGACGLKLHEDWGTTPAAIDCCLSVCDALDVQATLHSDTLNESGFVETTIAAFKGRTIHAFHTEGAGGGHAPDIIKVVGEQNVLPSSTNPTRPFTRNTLDEHLDMLMVCHHLDPHIAEDIAFAESRIRKETIAAEDILHDLGALSMFSSDSQAMGRVGEVVIRCWQTADKMKRQRGALPEDISGNDNFRARRYIAKYTINPAIAHGISHVVGSVEPGKLADLVLWSPAFFGVKPDLVLKGGSIAYALMGDANASIPTPQPVHYRPMFASFGRSLIESSLIFVSAVSIERGVGARYGLSRPLEAVRGTRGSISKKSMILNDATPVMEVDPETYEVRADGELLTCEPADVLPMAQRYFLF
What are the official names of this protein?
Urease subunit alpha, Urea amidohydrolase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: FTSZ_NEIMA
Sequence: MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFISANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANMLFITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHVDSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVKTVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLKMSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPAREVEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
What is the function of this protein?
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site.  The regulation of the ring assembly controls the timing and the location of cell division.  One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells.  Binds GTP and shows GTPase activity.
What are the official names of this protein?
Cell division protein FtsZ.
What is the protein family that this protein belongs to?
Belongs to the FtsZ family.
What are the subcellular locations of this protein?
Cytoplasm. Note=Assembles at midcell at the inner surface of the cytoplasmic membrane.
Protein: YBEL_ECO57
Sequence: MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
What are the official names of this protein?
Uncharacterized protein YbeL.
Protein: HIS1_BUCBP
Sequence: MISNNRLRIAMQKTGRLSDDSKDLLTRCGIKINLHKQKLIAFAENMPIDVMCVRDDDIPGLVMDKVVDIGIIGENVLEEEVLNRQVQLDNCSYTKLKRLDFGICRLSLAVPINIEYNNIHCLNHTRIATSYPHLLKRYCDKKKLTFKSCMLNGSVEVAPRAGLSDAICDLVSTGATLEANGLREVEVIFFSKACVICKTGFISLEKKNVIDKLMTRIQGVIKARESKYIMLHAPIEKLEKVMNLLHGAENPTILKLAGDNTRVAMHMVSSETLFWETMEKLKLLGASSILVLPIEKMME
What is the function of this protein?
Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP).  Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
What are the official names of this protein?
ATP phosphoribosyltransferase, ATP-PRT, ATP-PRTase.
What is the protein family that this protein belongs to?
Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SSRP_STRP2
Sequence: MAKGEGKVVAQNKKARHDYTIVDTLEAGMVLTGTEIKSVRAARINLKDGFAQVKNGEVWLSNVHIAPYEEGNIWNQEPERRRKLLLHKKQIQKLEQETKGTGMTLVPLKVYIKDGYAKLLLGLAKGKHDYDKRESIKRREQNRDIARVMKAVNQR
What is the function of this protein?
Required for rescue of stalled ribosomes mediated by trans-translation.  Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes.  tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB.  tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame.  During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA.  The ribosome then switches to translate the ORF on the tmRNA; the nascent peptide is terminated with the 'tag peptide' encoded by the tmRNA and targeted for degradation.  The ribosome is freed to recommence translation, which seems to be the essential function of trans-translation.
What are the official names of this protein?
SsrA-binding protein, Small protein B.
What is the protein family that this protein belongs to?
Belongs to the SmpB family.
What are the subcellular locations of this protein?
Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes.
Protein: ANMK_BORPE
Sequence: MDSTTHGPRTHVPGRLFIGLMSGTSMDGADGVLVRLDGPRPEVLASASLPMPAALRDELFALNHAGANELERAALAANGLARLYARAVRQLLDQAGLQPGDVAAIGAHGQTVRHRPDLGYTLQLNAPALLAELAGIDVVADFRSRDVAAGGQGAPLVPPFHAALFAGGQARAVLNLGGIANVTLLEPGRPPRGFDTGPANVLLDAWCQRHTGQPYDADGRFAAQGQVLADLLEHLIASEPWFALAPPKSTGRDLFNLDWLLARLQAFDGPAPQPQDVQATLQRLTARTVANAIDASAAAPRDVLVCGGGARNPGLMRELAYCLQRPVRPTDDAGVPAQWVEALAFAWLAQACLDRIPAGLPTVTGARAARVLGALYPA
What is the function of this protein?
Catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P.  Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
What are the official names of this protein?
Anhydro-N-acetylmuramic acid kinase, AnhMurNAc kinase.
What is the protein family that this protein belongs to?
Belongs to the anhydro-N-acetylmuramic acid kinase family.
Protein: FLIW_BACP2
Sequence: MIIQTKYHGEVKIKEEQMINFSNGIPGFLDQKQFVILPLSEESPFLVLQSLKNAELGFIVSSPFLFFNQYEFDLDETVVEILEVEDANDVEVMVILTMESSIEKTTANLRAPIIVNRKNMKAKQVILHDSAYHTKHLLEVASSC
What is the function of this protein?
Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin.  Binds to flagellin and participates in the assembly of the flagellum.
What are the official names of this protein?
Flagellar assembly factor FliW.
What is the protein family that this protein belongs to?
Belongs to the FliW family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RODZ_SALNS
Sequence: MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTGAVTSQDTTPAQTAPAPATPVDSTAATQTQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEPTPAQ
What is the function of this protein?
Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.
What are the official names of this protein?
Cytoskeleton protein RodZ.
What is the protein family that this protein belongs to?
Belongs to the RodZ family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell.
Protein: END4_CHLL2
Sequence: MKRVGAHVSIAGGVENAPLQASKIGAKAFALFTKNQRQWKSPELAALSIETFRRNCCDGGFRPEHILPHDSYLINLGSPEPDKLDRSRNAFFDEMQRVERLGLKMLNFHPGSHLNQIEPDACLQLIAESVNMALDRSCCVTAVIENTAGQGTNLGRSFDDLACIIDHVEDKSRVGVCLDTCHLFAGGYDIRTKEALDRTLDEFDRIVGIRYLKAMHLNDAKQPLGSRLDRHECIGKGAIGIEAFTAIMQHPLLDELPLILETPDSDGWQEEIGLLYRLAEEQVKDVSTPP
What is the function of this protein?
Endonuclease IV plays a role in DNA repair.  It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.
What are the official names of this protein?
Probable endonuclease 4, Endodeoxyribonuclease IV, Endonuclease IV.
What is the protein family that this protein belongs to?
Belongs to the AP endonuclease 2 family.
Protein: RL1_STAA3
Sequence: MAKKGKKYQEAASKVDRTQHYSVEEAIKLAKETSIANFDASVEVAFRLGIDTRKNDQQIRGAVVLPNGTGKSQSVLVFAKGDKIAEAEAAGADYVGEAEYVQKIQQGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKAGIVHASIGKVSFTDEQLIENFNTLQDVLAKAKPSSAKGTYFKSVAVTTTMGPGVKIDTASFK
What is the function of this protein?
Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.
What are the official names of this protein?
50S ribosomal protein L1.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL1 family.