PharMolix/UniProtQA huggingface dataset:
Protein: Y1888_MYCS2
Sequence: MESTHETWDLATSVGATATMVAAGRARATTTGLIDDRFAEPLVRAVGIDFMTRWATGDLAAADVDIPGATWGMQQMTDLLAARTRYFDAFFGDAAAAGVRQAVILASGLDARGYRLDWPAGTVLFEIDMPDVLEFKGRALTDLRAEPTAEVRMVAVDLRDDWPAALRAKGFDPTRPTAWSAEGLLPFLPPEAQDRLLDAITSLSASGSRLAAEVALLGSDSEDGALGADGARDLEPLLARWREHGFDLDLGDLGNSGPRNDVDDYLEARGWTSTRTPLAALLDAAGLEVPRPADGRKSLSDNYYSTAIKG
What is the function of this protein?
Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
What are the official names of this protein?
Putative S-adenosyl-L-methionine-dependent methyltransferase MSMEG_1888/MSMEI_1848.
What is the protein family that this protein belongs to?
Belongs to the UPF0677 family.
Protein: YADM_ECOLI
Sequence: MIKTTPHKIVILMGILLSPSVFATDINVEFTATVKATTCNITLTGNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALATFNFIYQ
What is the function of this protein?
Part of the yadCKLM-htrE-yadVN fimbrial operon.  Could contribute to adhesion to various surfaces in specific environmental niches.
What are the official names of this protein?
Uncharacterized fimbrial-like protein YadM.
What is the protein family that this protein belongs to?
Belongs to the fimbrial protein family.
What are the subcellular locations of this protein?
Fimbrium.
Protein: ATPA_EUGGR
Sequence: MIRVRPNEVTRIIRQQVKKYRQELKIVNVGTVLQVGDGIARIYGLEKVMAGELVEFDEGTIGIALNLEADNVGAVLMGEATNLKEGASVKTTGKIAQIPVGRGFLGRVVDALARPIDGKGDIASFTTRLIESPAPGIVSRRSVHEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQGVICVYVAIGQKASSVSQIVTTLEKRGAMEYTIIVAENADSSATLQYLAPYTGAALAEYFMYNGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGQGSMTALPIVETQAGDVSAYIPTNVISITDGQVFLSADIFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFSQFASDLDQATQNQLARGARLRELLKQPQASPLSVADQVATIYTGINGYLDDINLEDVRGFLIELREHINNEKPTFKEIINKTKTFTQEAELLLKFTIIDLKKNFKKRIK
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The alpha chain is a regulatory subunit.
What are the official names of this protein?
ATP synthase subunit alpha, chloroplastic, ATP synthase F1 sector subunit alpha, F-ATPase subunit alpha.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein.
Protein: COX1_CANSI
Sequence: XWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFVGVNMTFFPQHF
What is the function of this protein?
Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation.  The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase.  Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water.  Electrons originating from reduced cytochrome c in the intermembrane space (IMS) are transferred via the dinuclear copper A center (CU(A)) of subunit 2 and heme A of subunit 1 to the active site in subunit 1, a binuclear center (BNC) formed by heme A3 and copper B (CU(B)).  The BNC reduces molecular oxygen to 2 water molecules using 4 electrons from cytochrome c in the IMS and 4 protons from the mitochondrial matrix.
What are the official names of this protein?
Cytochrome c oxidase subunit 1, Cytochrome c oxidase polypeptide I.
What is the protein family that this protein belongs to?
Belongs to the heme-copper respiratory oxidase family.
What are the subcellular locations of this protein?
Mitochondrion inner membrane; Multi-pass membrane protein.
Protein: ARCA_STAAR
Sequence: MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVLREEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVDKIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRARRRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKEVLAIGVSERTSAQAIEKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTIHSAILKAEGNMNIFIIEYDDVNKDISIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIRPGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
What are the official names of this protein?
Arginine deiminase, ADI, Arginine dihydrolase, AD.
What is the protein family that this protein belongs to?
Belongs to the arginine deiminase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS14_SHISS
Sequence: MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW
What is the function of this protein?
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
What are the official names of this protein?
30S ribosomal protein S14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS14 family.
Protein: CRE3_CONVL
Sequence: MGFRVLVLVVMATTSALPFTFSEEPGRSPFRPALRSEEAQALRHGLTLLLARRADGQPPDMRQPEMRRPEMRRPEVRQPEFAELSVGQRRWDVDQCMYYCLTGVVGYSYTECETMCT
What are the official names of this protein?
Conotoxin vil14.3.
What is the protein family that this protein belongs to?
Belongs to the conotoxin R superfamily.
Protein: MYOB3_ARATH
Sequence: MAANNFATKLSRNTNRITVILVYAFLEWLLMFFIFLNSFFTYFIVKFASFFGLKQVCLLCPKLDRIFERKPENRFTYKELLCQNHIAELASLSFCRTHGKLSESANLCSDCSNREEEQSNIGLGFCTCCQKSLADKPYPNYLLLKSSIWGKTLGDREDGGLILEMIDDDKFGDGFEIDRESYPLGFFRDKAEEGKKQDQQQNGEVISDVESYGLSLREVSEEDGLRSIISNNSPGNEAKSRVSEDEQRNDDTSNVATYGEDQISGRVEEKEEETGVADLLYDQFESKNFTGSQIEEEEEDREETTKELDPETPTSVSTLFNKKLHFLARNEYAAAEDAGDGNVLVSEMDGGDPLRTIERLRETVRAEQEALRDLYAELEEERSASAISANQTMAMITRLQEEKAKVQMEALQYQRMMEEQAEYDQEALQLLNHLMVKREKEKEQLQRELEVYRAKVLEYESKAKNKIIVVENDCEADDDDKEEENREEDNSSEMDVDLEKITLDCVQHMSMLGESLSEFEEERLVILDQLKVLEDRLVTMQDKESAEDPGEFSNSYEEASNGHGGLTMASMAKSLLPLLDAAENESEDGSQGLPESDEKNFGSDSEKLEIIKQVDSVYERLQELETDGEFLKNCMSSAKKGDKGTDILKDILQHLRDLRTIELTNTIENQTTQEE
What is the function of this protein?
Membrane-anchored myosin receptors that define a distinct, plant-specific transport vesicle compartment.
What are the official names of this protein?
Myosin-binding protein 3.
What are the subcellular locations of this protein?
Membrane; Single-pass membrane protein.
Protein: Y226_BACFN
Sequence: MLLATTPIIEGKRITTYYGIVSGETIIGANVFRDFFASIRDIVGGRSGSYEEVLREAKDTALKEMSEQARQMGANAVIGVDLDYETVGGSGSMLMVTASGTAVFLE
What are the official names of this protein?
UPF0145 protein BF0226.
What is the protein family that this protein belongs to?
Belongs to the UPF0145 family.
Protein: ATPB_IPOAQ
Sequence: MRINPTTSGSEVSTVEKKNLGRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDTDGLMRGMEVSDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLKT
What is the function of this protein?
Produces ATP from ADP in the presence of a proton gradient across the membrane.  The catalytic sites are hosted primarily by the beta subunits.
What are the official names of this protein?
ATP synthase subunit beta, chloroplastic, ATP synthase F1 sector subunit beta, F-ATPase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the ATPase alpha/beta chains family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein.
Protein: PREY_HUMAN
Sequence: MLSGARCRLASALRGTRAPPSAVARRCLHASGSRPLADRGKKTEEPPRDFDPALLEFLVCPLSKKPLRYEASTNELINEELGIAYPIIDGIPNMIPQAARMTRQSKKQEEVEQR
What is the function of this protein?
In mitochondria, S-adenosylmethionine-dependent methyltransferase chaperone that supports both coenzyme Q biosynthesis, by stabilizing its components, such as COQ5, and NADH:ubiquinone oxidoreductase complex (complex I, MT-ND1) assembly, by stabilizing complex I assembly factors, such as NDUFAF5.
What are the official names of this protein?
Protein preY, mitochondrial, PIGY upstream reading frame protein.
What is the protein family that this protein belongs to?
Belongs to the PREY family.
What are the subcellular locations of this protein?
Mitochondrion.
Protein: CALA_PSEUH
Sequence: MQLTNKKIVVTGVSSGIGAETARVLRSHGATVIGVDRNMPSLTLDAFVQADLSHPEGIDKAISQLPEKIDGLCNIAGVPGTADPQLVANVNYLGLKYLTEAVLSRIQPGGSIVNVSSVLGAEWPARLQLHKELGSVVGFSEGQAWLKQNPVAPEFCYQYFKEALIVWSQVQAQEWFMRTSVRMNCIAPGPVFTPILNEFVTMLGQERTQADAHRIKRPAYADEVAAVIAFMCAEESRWINGINIPVDGGLASTYV
What is the function of this protein?
Catalyzes the conversion of coniferyl alcohol into coniferyl aldehyde in the eugenol degradation pathway.  Specific for coniferyl alcohol; does not act on cinnamyl alcohol, 4-coumaryl alcohol or sinapyl alcohol.
What are the official names of this protein?
Coniferyl-alcohol dehydrogenase.
What is the protein family that this protein belongs to?
Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Protein: EXBB_NEIMC
Sequence: MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARKGNAAVKRHMRDNLSLNEAVEKVRAVDAPLSKLAQEALQFYRNYRRNEASELAQALPLNEYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMSIAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQKDS
What is the function of this protein?
Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates.  Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity).
What are the official names of this protein?
Biopolymer transport protein ExbB.
What is the protein family that this protein belongs to?
Belongs to the ExbB/TolQ family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: Y8135_DICDI
Sequence: MFRYLQQKSNQINYCNNVKIFSNLINNVKINHYVTKKPLSLHRSKTIKKTQKRDESIINGIVESVPKSESTTDSIKMLMNQLNEKLKSPKPKQKSSKPKLTKPTQSELLMNENENQHEKDDDEEEDEQEEYGEGVLNFDENMDLYDQNDRLAEYEMDENRMEGMEDYVFDDDLPINNKNNNNNNNKQSQPIIETKEIFTQKQQKEEEKEEEEKKFIKRLDNKINIKREEDEYIEDEYIENDNNNNNNNNKYLENKNKNNNNKIEEKPELTKQQQKEAKKRLEERIKKQYGDKANLILFKIEQRKKNGQWAPENKVTRSDMEQIRELHKEDPEIYTIPVLAKSFRISLEAISRILHSKWSPDQTKLHKLHKKKVLENKEKYSPYSKTNKEKNYINLSSQAKININNDNNKNKNNNNNNKNKNNNNNNNNNNNNNNTQKEKYKFTPNVIPNSLLQRIDPKEWYHQVKDYNNYRIDLEKKKNNLKNNFEKNTNEKKEINLKSSYERLLALENNKLNK
What are the official names of this protein?
Putative neugrin-like protein DDB_G0288135.
What is the protein family that this protein belongs to?
Belongs to the neugrin family.
Protein: SRMS_MOUSE
Sequence: MEPFLRKRLTFLSFFWDKIWPADESEEDIPRIQGHDDNPVPEQAAAVEPCSFPAPRARLFRALYDFTARCAEELSVSRGDRLYALKEEGDYIFAQRLSGPPSTGLVPVTYLAKATPEPPSDQPWYFSGISRAQAQQLLLSPANAPGAFLIRPSESSIGGYSLSVRAQAKVCHYRICMAPSGSLYLQEGQLFPSLDALLAYYKTNWKLIQNPLLQPCIPQIPLVQDEWERPRSEFVLRRKLGEGFFGEVWEGLWLGSIPVAVKVIKSADMKLADLTKEIEALKSLRHERLIRLHAICSLGEPVYIVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTCKVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNHETLQQISRGYRLPRPAVCPAEVYVLMVECWKGSPEERPTFAILREKLNAINRRLHLGLT
What is the function of this protein?
Non-receptor tyrosine-protein kinase which phosphorylates DOK1 on tyrosine residues.  Also phosphorylates KHDRBS1/SAM68 and VIM on tyrosine residues.  Phosphorylation of KHDRBS1 is EGF-dependent.
What are the official names of this protein?
Tyrosine-protein kinase Srms, PTK70.
What is the protein family that this protein belongs to?
Belongs to the protein kinase superfamily. Tyr protein kinase family. SRC subfamily.
What are the subcellular locations of this protein?
Cytoplasm. Note=Localizes to punctate cytoplasmic structures.
Protein: ILVD_BACAC
Sequence: MRSDMIKKGFDKAPHRSLLKATGLKDEDFDKPFIAICNSFIEIIPGHKHLNEFGKLVKEAVRAAGMVPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADSVETVVNAHWFDGMICIPNCDKITPGMMMAALRINIPTVFVSGGPMAAGKTSKGDVVDLSSVFEGVGAYQSGKISEEELKDIEDHGCPSCGSCSGMFTANSMNCLCEVLGLALPGNGSILAIDPRREELIKQAAEKLKILIERDIKPRDIVTEEAIDDAFALDMAMGGSTNTVLHTLALAQEAGLDYDMNRIDAVSRRVPHLCKVSPASNWHMEDIDRAGGISAILKEMSRKEGVLHLDRITATGQTLRENIAHAEIKDKEVIHSLENPHSEEGGLRILKGNLAKDGAVIKSGATEVKRFEGPCVIFNSQDEALAGIMLGKVKKGDVVVIRYEGPRGGPGMPEMLAPTSAIAGMGLGADVALLTDGRFSGASRGISVGHISPEAAAGGTIALLEQGDIVCIDVEERLLEVRVSDEELGKRKKEWKRPEPKVKTGWLGRYAQMVTSANTGAVLKIPNFD
What is the function of this protein?
Functions in the biosynthesis of branched-chain amino acids.  Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.
What are the official names of this protein?
Dihydroxy-acid dehydratase, DAD.
What is the protein family that this protein belongs to?
Belongs to the IlvD/Edd family.
Protein: NAPA_SHIBS
Sequence: MKLSRRSFMKANAVAAVAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGKYDKEGEFTLITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNKLTQDATDPLSKETDFKKCAVKLEKV
What is the function of this protein?
Catalytic subunit of the periplasmic nitrate reductase complex NapAB.  Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
What are the official names of this protein?
Periplasmic nitrate reductase.
What is the protein family that this protein belongs to?
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
What are the subcellular locations of this protein?
Periplasm.
Protein: RRP4_METMA
Sequence: MDKKIVIPGDLLSDDVKKSGYGTYVKNDKIYSSLCGIESLKEDKVGVIPLAGAYIPSVNDVVIGVVIVVTPSNWILDIAAPYDGLLHVSEYPRRVESREMPEILDVGDSVILRVRDVDSSMKIELALRDPNLHKLRTGQIVEVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDEDIELLSKALRKIEAEAQRSGLTDRIYNFLKNERMKEKESKPVEFLKNEKTDVSVAKEDHSEDIYRKIDVLLDPKN
What is the function of this protein?
Non-catalytic component of the exosome, which is a complex involved in RNA degradation.  Increases the RNA binding and the efficiency of RNA degradation.  Confers strong poly(A) specificity to the exosome.
What are the official names of this protein?
Exosome complex component Rrp4.
What is the protein family that this protein belongs to?
Belongs to the RRP4 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: POB3_ASPOR
Sequence: MESFDNIYLDLSKQPGKCKLAESGLGWKPSGEGETFTLDSSNVGAAQWSRAAKGFELKILSRSSGVIQLDGFDQEDFERLSKAFKIWYGINVESREHALRGWNWGKAEFTKAELSFNVQNRPAFEVPYSEISNTNLAGKNEVAVELALNTDGADANAQPAGSTKNRGRKAASGPDELVEMRFYIPGTVMKTEKGIKEENGKEENGEEEEEGEEQNAANLFYEMLMEKAEIGDVAGDTFATFLDVLHLTPRGRFDIDMYESSFRLRGKTYDYKIQYSSIKKFFLLPKNDDTHTLIVLGLDPPLRQGQTRYPFLVMQLKLDEEISLELNMTDELMETRYKDKLEPRYEEPIHQVVTKIFRGLSGKKVIMPSKDFVSHHGHSGVKCSIKANEGLLYFLDKSLIFVPKPATYIQVENIAIITMSRVGGAVSASRTFDITVSLKAGMGEHQFSNINREEQQPLEEFFKAKNIRFKNEMSDDAGALLAAALDNDVMGSSDDEGVRADRGSADEDEESIDEDFQAESESDVAEEYDSAHESSGSGSDAEMNDASDGGGDDDDDDEDVDMSEEERPKKKSKVGK
What is the function of this protein?
Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes.  The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair.  During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure.  It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II (By similarity).
What are the official names of this protein?
FACT complex subunit pob3, Facilitates chromatin transcription complex subunit pob3.
What is the protein family that this protein belongs to?
Belongs to the SSRP1 family.
What are the subcellular locations of this protein?
Nucleus. Chromosome. Note=Colocalizes with RNA polymerase II on chromatin. Recruited to actively transcribed loci.
Protein: IDI_ECO57
Sequence: MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPNGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQAANSEARKLLSAFAQHN
What is the function of this protein?
Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
What are the official names of this protein?
Isopentenyl-diphosphate Delta-isomerase, IPP isomerase, IPP:DMAPP isomerase, Isopentenyl pyrophosphate isomerase.
What is the protein family that this protein belongs to?
Belongs to the IPP isomerase type 1 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MDTG_ECOK1
Sequence: MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQISN
What is the function of this protein?
Confers resistance to fosfomycin and deoxycholate.
What are the official names of this protein?
Multidrug resistance protein MdtG.
What is the protein family that this protein belongs to?
Belongs to the major facilitator superfamily. DHA1 family. MdtG (TC 2.A.1.2.20) subfamily.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: OPT3_ARATH
Sequence: MDAEKATDKTNVHLSSDHERCPVEEVALVVPETDDPSLPVMTFRAWFLGLTSCVLLIFLNTFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHNLLGWSFSLNPGPFNIKEHVIITIFANCGVAYGGGDAYSIGAITVMKAYYKQSLSFICGLFIVLTTQILGYGWAGILRRYLVDPVDMWWPSNLAQVSLFRALHEKENKSKGLTRMKFFLVALGASFIYYALPGYLFPILTFFSWVCWAWPNSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFIYIIVPVCYWKFNTFDARKFPIFSNQLFTTSGQKYDTTKILTPQFDLDIGAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFNGRDIWKQTWSAVNTTKLDIHGKLMQSYKKVPEWWFYILLAGSVAMSLLMSFVWKESVQLPWWGMLFAFALAFIVTLPIGVIQATTNQQPGYDIIGQFIIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVAGVVNLGVAWWMLESIQDICDIEGDHPNSPWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLIGAVLPVPVWALSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFNYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHDLKWWGTEVDHCPLASCPTAPGIKAKGCPVF
What is the function of this protein?
May be involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner.  Acts also as a metal transporter that could be a component of the copper transport machinery.  Essential for early embryo development.
What are the official names of this protein?
Oligopeptide transporter 3, AtOPT3.
What is the protein family that this protein belongs to?
Belongs to the oligopeptide OPT transporter (TC 2.A.67.1) family.
What are the subcellular locations of this protein?
Membrane; Multi-pass membrane protein.
Protein: YOJO_ECOL5
Sequence: MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKHIYIAINSPEIFLLVCFLIRI
What are the official names of this protein?
Uncharacterized protein YojO.
What is the protein family that this protein belongs to?
Belongs to the YojO family.
Protein: SSPA_STAAN
Sequence: MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQSSKQQTPKIKKGGNLKPLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFINENVRNFLKQNIEDIHFANDDQPNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDNNNSDNPDAA
What is the function of this protein?
Preferentially cleaves peptide bonds on the carboxyl-terminal side of aspartate and glutamate.  Along with other extracellular proteases it is involved in colonization and infection of human tissues.  Required for proteolytic maturation of thiol protease SspB and inactivation of SspC, an inhibitor of SspB.  It is the most important protease for degradation of fibronectin-binding protein (FnBP) and surface protein A, which are involved in adherence to host cells.  May also protect bacteria against host defense mechanism by cleaving the immunoglobulin classes IgG, IgA and IgM.  May be involved in the stability of secreted lipases (By similarity).
What are the official names of this protein?
Glutamyl endopeptidase, Endoproteinase Glu-C, Staphylococcal serine proteinase, V8 protease, V8 proteinase.
What is the protein family that this protein belongs to?
Belongs to the peptidase S1B family.
What are the subcellular locations of this protein?
Secreted.
Protein: RL31_MYCS2
Sequence: MKTGIHPEYVDTTVQCGCGHSFTTRSTKQSGTIVVEVCSQCHPFYTGKQKILDSGGRVARFEKRYGKRNKAAADK
What is the function of this protein?
Binds the 23S rRNA.
What are the official names of this protein?
50S ribosomal protein L31.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
Protein: KAIC_THELV
Sequence: MNQSLGPSEPEKPQDNTAEDSTEPTPDNHRADLSELRGIPKKQTGIEGFEDISHGGLPLGRTTLVSGTSGTGKTLFAMQFLYNGIVKYQEPGIFVTFEETPADIIRNASSFGWDLQALIDRGQLFILDASPDPEGYEVSGNFDLSALIERIQYAIRKYKAKRVSIDSVTAIFQQYDPAGVVRRELFRLTARLKQANVTTVMTTERTDEYGPIARYGVEEFVSDNVVILRNILEGEKRRRTIEILKLRGTTHMKGEYPFTITNDGINIFPLGAMQLTQRSSNVRVSSGIEKLDEMCGGGFFKDSIILATGATGTGKTSLVSKFLERGCLDGERCILFAYEESRAQLSRNASSWGIDLEEFERQGLLKIICAYPESAGLEDHLQKIKTEMMAFKPSRMAIDSLSALARGVSQNAFRQFVIGVTGLAKQEEITGFFTNTTDQFMGSHSITESHISTITDTIILLQYVEIRGEMARALNVFKMRGSWHDKGIREYLISNAGIQIRDSFRGYERIISGSPTRINVDEKNELSRIVQNVQALEEEGL
What is the function of this protein?
Has a weak, temperature-independent ATPase activity; ATPase activity defines the circadian period.  The phosphorylation state of KaiC modulates its ATPase activity and effects KaiB binding.
What are the official names of this protein?
Circadian clock oscillator protein KaiC.
What is the protein family that this protein belongs to?
Belongs to the KaiC family.
Protein: YPI4_VIBAL
Sequence: MSAAVWQDGEDIILKLYIQPKASRDKIVGLHGEELKIAITAPPVDGKANAHLTK
What are the official names of this protein?
UPF0235 protein in proC 3'region.
What is the protein family that this protein belongs to?
Belongs to the UPF0235 family.
Protein: RR8_MESVI
Sequence: MVNDTIADMITRIRNANLITQKQVAVIASNTNKGIAQCLLKEGFIESIEYNTNSSNNPELILSLKYQGKKRKPYITALQRVSKSGLRVYTSYKDIPKVLGGIGIAILSTSQGILTDKQARMQKIGGEILCYIW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
What are the official names of this protein?
30S ribosomal protein S8, chloroplastic.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS8 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.