PharMolix/UniProtQA huggingface dataset:
Protein: NUOI_RICB8
Sequence: MINYLKSFFLYEIIRGLALTLKYFFKAKVTINYPYEKSPVSPRFKGEHALRRYENGEERCIACKLCEAICPAQAIVIEADEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHTALIYDKEKLLQNGDRWEQALANKLHKDYEYR
What is the function of this protein?
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.  The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone.  Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
What are the official names of this protein?
NADH-quinone oxidoreductase subunit I, NADH dehydrogenase I subunit I, NDH-1 subunit I.
What is the protein family that this protein belongs to?
Belongs to the complex I 23 kDa subunit family.
What are the subcellular locations of this protein?
Cell inner membrane; Peripheral membrane protein.
Protein: EX7S_PSEF5
Sequence: MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQAALAQAEQKVQILLERDGELAEQPFDAEQPE
What is the function of this protein?
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.
What are the official names of this protein?
Exodeoxyribonuclease 7 small subunit, Exodeoxyribonuclease VII small subunit, Exonuclease VII small subunit.
What is the protein family that this protein belongs to?
Belongs to the XseB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: YCF15_TOBAC
Sequence: MLLLKHGRIEILDQNTMYGWYELPKQEFLNSKQPVQIFTTKKYWILFRIGPERRRKAGMPTGVYYIEFTR
What are the official names of this protein?
Putative uncharacterized protein ycf15, ORF 70, ORF 87.
What is the protein family that this protein belongs to?
Belongs to the ycf15 family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: FLOA_STAAR
Sequence: MFSLSFIVIAVIIVVALLILFSFVPIGLWISALAAGVHVGIGTLVGMRLRRVSPRKVIAPLIKAHKAGLALTTNQLESHYLAGGNVDRVVDANIAAQRADIDLPFERAAAIDLAGRDVLEAVQMSVNPKVIETPFIAGVAMNGIEVKAKARITVRANIARLVGGAGEETIIARVGEGIVSTIGSSKHHTEVLENPDNISKTVLSKGLDSGTAFEILSIDIADVDISKNIGADLQTEQALADKNIAQAKAEERRAMAVATEQEMKARVQEMHAKVVEAESEVPLAMAEALRSGNISVKDYYNLKNIEADTGMRNAINKRTDQSDDESPEH
What is the function of this protein?
Found in functional membrane microdomains (FMM) that may be equivalent to eukaryotic membrane rafts.  FMMs are highly dynamic and increase in number as cells age.  Flotillins are thought to be important factors in membrane fluidity.
What are the official names of this protein?
Flotillin-like protein FloA.
What is the protein family that this protein belongs to?
Belongs to the flotillin-like FloA family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein. Membrane raft; Multi-pass membrane protein.
Protein: PNP_AZOSB
Sequence: MPTAIKKTFTYGAHTVTLETGEVARQAGGAVIVNVDDTVVLATVVAAKDAKPGQDFFPLTVDYVEKFYAAGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPEGFYNEVQVIVTVLSLNPEVDADIPAMIAASAALSISGIPFDGPIGAARVGYADGQYLLNPTVEQLKTSKLNLVVAGTASAVLMVESEADELSEQVMLGAVVFGHEQMQAAINAINELVEVAGKPEWNWQPPAANDALVARVKELALADVEEAFRITSKQARTERLSEIRKRTIAALTDGVDNAPSENEIKDIFFTLEAGTVRSRILNGEPRIDGRDTRTVRPIDIRVGVLPRTHGSALFTRGETQALVVATLGTGRDEQIIDAIAGEYKERFMLHYNFPPFSTGETGRFGVTKRREIGHGRLAKRALVAMLPKGEDFSYTIRVVSEITESNGSSSMASVCGGSLALMDAGVPMKDHVAGIAMGLIKDGNRFAVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIQGITKEIMQVALAQAGEGRLHILKQMKDALGVARGEVSEFAPRMLNMKINPEKIRDVIGKGGAVIRALQEETGTVIEIEDDGSITISSVSAEGAQKAKARIEDITAEVEVGKVYEGTVVRLLDFGAIVNILPGRDGLLHVSQIANERVNNVGDYVKEGQAVRVKVLETDERGKIRLSMKALLNENAG
What is the function of this protein?
Involved in mRNA degradation.  Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
What are the official names of this protein?
Polyribonucleotide nucleotidyltransferase, Polynucleotide phosphorylase, PNPase.
What is the protein family that this protein belongs to?
Belongs to the polyribonucleotide nucleotidyltransferase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SYD_CLOB6
Sequence: MGEALRGLKRTIMCGEPRENNIGEKVTVMGWVQRKRNLGGLIFVDLRDRTGIMQIVFGEEINKEAFEKSDNVKSEYCIAVTGEIVKRQSPNNDMETGAVELKGEDIKILSESETPPIYIKEGLDASENVRLKYRYLDLRRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSRNYKGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDDVIDLNEKLLAKVFKEVAGIDVKLPIERMPYKIAMEKYGSDKPDLRFGMEINDLTEAVKNSEFKVFKGAIEAGGSVRAIKAENCATMGRKQIDKLQDFVKTYKAKGLAWIAYKEDEIKSPIAKFLTEEEMKAILEKMDAKVGDLILIVGDKNNVVFESLGALRLHLAKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHPFTAIMDEDIDLLDTDPGKVRAKAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEKAWERFGFLLEAFKFGPPPHGGLAYGLDRMIMFLAGTENIKDVITFPKNQNAFCPLTEAPNVVDENQLEELGIKKIEKED
What is the function of this protein?
Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp).
What are the official names of this protein?
Aspartate--tRNA ligase, Aspartyl-tRNA synthetase, AspRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y745_LIMRJ
Sequence: MRMSFYQFLMTQRNPNSADEVQQFANNAFFDTTFPKHSEDFDEISHYLEENADYLPSMTIFDEAWQRYIDAMN
What are the official names of this protein?
UPF0346 protein LAR_0745.
What is the protein family that this protein belongs to?
Belongs to the UPF0346 family.
Protein: SDH1_YEASX
Sequence: MEMTHYEKTPLIRQVFNNGKTNSWFYVKHEILQPGGSFKSRGIGHLIRKSNQQPLSEGSGKLAVFSSSGGNAGLAAATACRSMALNCSVVVPKTTKPRMVKKIQSAGAKVIIHGDHWGEADEYLRHKLMAQESQHGSKTLYVHPFDNETIWEGHSTIVDEIIEQLKENDISLPRVKALVCSVGGGGLFSGIIKGLDRNHLAEKIPVVAVETAGCDVLNKSLKKGSPVTLEKLTSVATSLASPYIASFAFESFNKYGCKSVVLSDQDVLATCLRYADDYNFIVEPACGASLHLCYHPEILEDILEQKIYEDDIVIIIACGGSCMTYEDLVKASSTLNVS
What are the official names of this protein?
L-serine dehydratase, L-serine deaminase.
What is the protein family that this protein belongs to?
Belongs to the serine/threonine dehydratase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL35_VIBA3
Sequence: MPKMKTNKGAAKRFQKTAGGIKFKHAGKRHILTKRTTKNKRQLRPNSILPKCEVAQVLRMMPYA
What are the official names of this protein?
50S ribosomal protein L35.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL35 family.
Protein: CRCB_SHISS
Sequence: MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSASTAH
What is the function of this protein?
Important for reducing fluoride concentration in the cell, thus reducing its toxicity.
What are the official names of this protein?
Putative fluoride ion transporter CrcB.
What is the protein family that this protein belongs to?
Belongs to the CrcB (TC 9.B.71) family.
What are the subcellular locations of this protein?
Cell inner membrane; Multi-pass membrane protein.
Protein: PANB_ACIBY
Sequence: MISLSDLRKFKAEGRKFSCLTCYDASMAKAMELAEIDTILIGDSLGMAIQGRDSTLPVTVEDMAYHTAAVRRGNQHALIMTDLPFMSYATLNDALQNAKTVMQAGAQMIKIEGGAWLSETVQVLTRNGVPVCVHLGLTPQSVHVFGGYKLQARTREAADQLIADCTAVVEAGAAVLLLECVPAQLGQEIAELFPNTPVIGIGAGNATDGQVLVVQDMLGLTFGRVARFVRNFMKEQSGETAILDAFKAFHAAVQDQSFPAKEHTFQVEL
What is the function of this protein?
Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate.
What are the official names of this protein?
3-methyl-2-oxobutanoate hydroxymethyltransferase, Ketopantoate hydroxymethyltransferase, KPHMT.
What is the protein family that this protein belongs to?
Belongs to the PanB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: KDPC1_NOSS1
Sequence: MSFAREASRAIRSSFVLWVIAAVIYPFFMIAVGQIVFPHQANGSLVRDSRGQVLGSTLIGQPFTSDRYFNSRPSTTVYSTANPNKDDNLVLQTGISGASNLAPSNPQLIERIKDEDLNRLQTSGIQPTADLVYTSGSSLDPHITPEAARAQVSRIAKVRQLPPQQLETLITQNTDSRFLGIFGEPGVNVLQLNLALDELKPT
What is the function of this protein?
Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm.  This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
What are the official names of this protein?
Potassium-transporting ATPase KdpC subunit 1, ATP phosphohydrolase [potassium-transporting] C chain 1, Potassium-binding and translocating subunit C 1, Potassium-translocating ATPase C chain 1.
What is the protein family that this protein belongs to?
Belongs to the KdpC family.
What are the subcellular locations of this protein?
Cell inner membrane; Single-pass membrane protein.
Protein: PSB28_SYNJB
Sequence: MASIEFSPGIQEVPTQVRVLKSKTGNRGSAIFRFEDLKSDTQNILGMRMIDEEGELTTRNIRAKFLNGEFKALEVTYDMETEAEWDRFLRFMERFSAANQMGMA
What are the official names of this protein?
Photosystem II reaction center Psb28 protein, Photosystem II 13 kDa protein, Photosystem II reaction center W protein.
What is the protein family that this protein belongs to?
Belongs to the Psb28 family.
What are the subcellular locations of this protein?
Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side.
Protein: RL8_DICDI
Sequence: MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLARVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEKLGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPMLKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAGKKVGLIAARRTGRLRGTKNISE
What are the official names of this protein?
60S ribosomal protein L8, 60S ribosomal protein L2.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL2 family.
Protein: RBSA_STRA1
Sequence: MKIDMRNISKSFGTNKVLEKIDLELQSGQIHALMGENGAGKSTLMNILTGLFPASTGTIYIDGEERTFSNPQEAEEFGISFIHQEMNTWPEMTVLENLFLGREIKTTFGLLNQKLMRQKALEAFKRLGVTIPLDIPIGNLSVGQQQMIEIAKSLLSQLSILVMDEPTAALTDRETENLFRVIRSLKQEGVGIVYISHRMEEIFKITDFVTVMRDGVIVDTKETSLTNSDELVKKMVGRKLEDYYPEKHSEIGPVAFEVSNLCGDNFEDVSFYVRKGEILGFSGLMGAGRTEVMRTIFGIDKKKSGKVKIDDQEITITSPSQAIKQGIGFLTENRKDEGLILDFNIKDNMTLPSTKDFSKHGFFDEKTSTTFVQQLINRLYIKSGRPDLEVGNLSGGNQQKVVLAKWIGIAPKVLILDEPTRGVDVGAKREIYQLMNELADRGVPIVMVSSDLPEILGVSDRIMVMHEGRISGELSRKEADQEKVMQLATGGK
What is the function of this protein?
Part of the ABC transporter complex RbsABC involved in ribose import.  Responsible for energy coupling to the transport system.
What are the official names of this protein?
Ribose import ATP-binding protein RbsA.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: RS20_RHOE4
Sequence: MANIKSQVKRIRTNEAARLRNQSVKSSLRTAIRSFREAAAAGDKDKANELLVSTSRKLDKAASKGVIHANQAANKKSALSQAANKL
What is the function of this protein?
Binds directly to 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS20 family.
Protein: AFF4_MOUSE
Sequence: MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMKDYIGDRSIPKLVAIPKPAVPTTTDEKANPNFFEQRHGGSHQSSKWTPVGPAPSTSQSQKRSSALQSGHSSQRSGAGGSGASSSGQRHDRDSYSSSRKKGQHGSEHSKSRSSSPGKPQAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRGPFSSGQHSSQSFPPSLMSKSSSMLQKPTAYVRPMDGQESVEPKLSSEHYSSQSHGNSMTELKPSSKAHLTKLKIPSRPLDASVSGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGPGEQKRYSTAKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQAYKKEGREQGTASNYTDPGGTKETSSATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKKPEKSAAEEPRGGLKIESETPVDMAASMPSSRHKAATKGSRKPNIKKESKSSPRPTAEKKKYKSASKPSQKSREIIETDTSSSDSDGSESLPPSSQTPKYPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKIDLNLLTRIPGKPYKETEPPKGEKKNVPEKHSREVQKQASEKASNKGKRKHKNDDDTRASESKKPKTEDKNSSGHKPSSSRESSKQSSTKEKDLLPSPAGPILSKDSKTEHGSRKRTVSQSSSLKSSGTSSKENSGSSSKSSSSSTAKQKKTEGKGPSSSKEAKEKAPNSSSNCPPSTPTSESSKPRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSDTVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKENALKYSKTLTEHLKNSYSNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGSYSSGGSSASASGSSVTIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASIMTDLARYTRQGLHWLRQDAKLIS
What is the function of this protein?
Key component of the super elongation complex (SEC), a complex required to increase the catalytic rate of RNA polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA.  In the SEC complex, AFF4 acts as a central scaffold that recruits other factors through direct interactions with ELL proteins (ELL, ELL2 or ELL3) and the P-TEFb complex.  In case of infection by HIV-1 virus, the SEC complex is recruited by the viral Tat protein to stimulate viral gene expression (By similarity).
What are the official names of this protein?
AF4/FMR2 family member 4.
What is the protein family that this protein belongs to?
Belongs to the AF4 family.
What are the subcellular locations of this protein?
Nucleus. Note=Associates to transcriptionally active chromatin but not at snRNA genes.
Protein: MTRG_METMA
Sequence: MDGKAPAAFVEPGEFNEVMKRLDQIDEKVEFVNSEVAQRIGKKVGRDIGILYGGVIGLLLFLIYVQISSMFM
What is the function of this protein?
Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin.  This is an energy-conserving, sodium-ion translocating step.
What are the official names of this protein?
Tetrahydromethanopterin S-methyltransferase subunit G, N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit G.
What is the protein family that this protein belongs to?
Belongs to the MtrG family.
What are the subcellular locations of this protein?
Cell membrane; Single-pass membrane protein.
Protein: DUT_HALSA
Sequence: MYERGAFVADHVEPVADDQIQPNGVDLTVDAVLEQTEPGRIDTDGKTIGDRSPVTPTADEDSTDTTVTIQPGTYILQYAETITIPENHVGFVYPRSSLMRNSCMLHSAVWDAGYTGRGEGLFEVHHEITIARGARVAQLVLATGDHENTYDGSYQHERTDTRPGE
What is the function of this protein?
This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
What are the official names of this protein?
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase, dUTPase, dUTP pyrophosphatase.
What is the protein family that this protein belongs to?
Belongs to the dCTP deaminase family. Archaeal dUTPase subfamily.
Protein: PLSX_DESRM
Sequence: MIKIALDAMGGDHAPMEIIRGARDAAQELGVHILLVGDQEKIQKELDGDEAGGLISIVHAPEVVGMEEHPVSAIRKKKNSSIVVATQLVKEGVADAVVSAGSTGAQMASSLFILGRISGVDRPAISTLLPTAKGVVVLLDAGANVDCRPKHLKQFAVMGSLYAERVLGLPSPKVGLVNIGAEETKGNELTIASYQMLQKTSINFVGNVEGRDLFLGGSDVAVCDGFVGNVILKSAEGLAMSILGMFKQELGRLEDIIGNERIMHMLGSFKRRMDYAEYGGAPLLGVNGVSVICHGSSRARAIKNALRVAKETVEQGLVPAIKESLENDKGVEE
What is the function of this protein?
Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP).  This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
What are the official names of this protein?
Phosphate acyltransferase, Acyl-ACP phosphotransacylase, Acyl-[acyl-carrier-protein]--phosphate acyltransferase, Phosphate-acyl-ACP acyltransferase.
What is the protein family that this protein belongs to?
Belongs to the PlsX family.
What are the subcellular locations of this protein?
Cytoplasm. Note=Associated with the membrane possibly through PlsY.
Protein: Y3016_METMA
Sequence: MDQPEDTDALVRFENITYSYPYSDSRVLSDVNLKLEKGEFVLLAGPSGCGKSTLVRCFNRLVPEISGGKLSGRVIIRGKDLREEKVHKLALEVGMVFQNPETQLFSLKVEDDLAFGPENLGLPGKEILSRVEKSLKAIKLEKLKDHFIFTLSGGEKQRTAIGGNLAMEPEILVLDEPTSDLDPSGTREVLDLLRRLNAEKRITLILIEHKLDEVFELADRMLVMDEGKVILDGKPFDILCREEGKLKKLGIHPPQIIEISRLLGFNCRTSSPPYENILKRLAELLMPSTRELQPESRKEAKPKIPPALCPEESLSHVRIEKLSCRREDGSETLKNVNLDIKYGEFLALLGHNGAGKTTLAGHLMRFHKPSSGRILLNGKNISKYSTAQLSQQIGYLFQNPDSQIFMNSVFEEVRFGLKNLKIPEEEMKKRVNSALEMMELSVYRNRHPQALSRGQRQRLAVASILALEPDLLVLDEPTTGQDRGHIHKFLDKIRELNRLGKTVILISHDMELVAEYAERVIVMKQGEVLLDGPAAEVFLSPEELDAAGLIPPLPARLALDLRKQGFDVPGMLTVSELKSFLRAHNVEIRD
What is the function of this protein?
Probably part of an ABC transporter complex.  Responsible for energy coupling to the transport system (By similarity).
What are the official names of this protein?
Putative ABC transporter ATP-binding protein MM_3016.
What is the protein family that this protein belongs to?
Belongs to the ABC transporter superfamily.
What are the subcellular locations of this protein?
Cell membrane; Peripheral membrane protein.
Protein: RPOC_PARDP
Sequence: MNQELATNPLNPLAAPRQFDEIKISLASPEEILAWSYGEVKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGLVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLKSLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLSYGQLLTEEEFLDAQDQYGADAFTANIGAEAIREMLANIDLAATAEQLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWMVLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQESVDALFDNGRRGRVITGNNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMEREGMKGEGMAFTSLEEVEHALASGAVHLHARITARLPQIDENGNEVITRFETTPGRLRLGALLPKNAKAPFELVNRLLRKKDIQNVIDTVYRYCGQKESVIFCDQIMGLGFREAFRAGISFGKDDMVVPPTKWDLVEETQDQVKQFEQQYLDGLITQGEKYNKVVDAWSKCNDRVTDAMMKTISATKKDEKGAELEPNSVYMMAHSGARGSVSQMKQLGGMRGLMAKPNGEIIETPIISNFKEGLTVLEYFNSTHGARKGLSDTALKTANSGYLTRRLVDVAQDCIIREHDCGTDHAITASAAVNDGEVVSPLSERVLGRVAAEDVLVPGEDVVIVRKNELIDERKADEIEAAGVQNVRIRSALTCESDDGVCALCYGRDLARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFIAAAQEGTVAFENESTLENANGELIVMSRNMQLHIKSATGDTLASHKLFYGSKLFVREGDAVARGQKMFEWDPYTLPIIAEKAGVAKYVDLISGISVRDETDDATGMTQKIVTDWRSAPKGNELKPEIIIVDQDGEPVRNEQGNPVTYPMSVEAILSVEDGQEIKAGDVVARIPREGAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGYVRFGKDYKNKRRIAIEPADDTLEPVEYMVPKGKHIPVQEGDFVQKGDYIMDGNPAPHDILRIMGIEALADYLIDEVQDVYRLQGVKINDKHIEVIVRQMLQKIEILDSGDTTLLKGEHVDRDEFEEENAKIEAKGGRQATGEPVLLGITKASLQTRSFISAASFQETTRVLTEAAVQGKRDKLVGLKENVIVGRLIPAGTGGATARVRRIATDRDQEVIEARRAEAEAAAALIAPEDTPAEVGGED
What is the function of this protein?
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit beta', RNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'.
What is the protein family that this protein belongs to?
Belongs to the RNA polymerase beta' chain family.
Protein: RL23_BIFLO
Sequence: MVAIHKPAHDVILKPVVSEKSYAASDRGQYTFVVAPDANKVQIKQAIEEIFKVKVTNVNTLNRAGKKQRTRTGFGQRASQKRAIVTVAEGQTIDIFGN
What is the function of this protein?
One of the early assembly proteins it binds 23S rRNA.  One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.  Forms the main docking site for trigger factor binding to the ribosome.
What are the official names of this protein?
50S ribosomal protein L23.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL23 family.
Protein: RL14_PSEA7
Sequence: MIQTQSMLDVADNSGARRVMCIKVLGGSHRRYAGIGDIIKVTVKEAIPRGKVKKGQVMTAVVVRTKHGVRRTDGSIIRFDGNAAVLLNSKQEPIGTRIFGPVTRELRTEKFMKIVSLAPEVL
What is the function of this protein?
Binds to 23S rRNA.  Forms part of two intersubunit bridges in the 70S ribosome.
What are the official names of this protein?
50S ribosomal protein L14.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL14 family.
Protein: EFTS_MESFL
Sequence: MAVNAQLIKELREITQAGMMDCKKALEATDGNIEDAIVWLRENGLAKAAKKSDRVAAEGVALAKEDDKKVVILEVNSETDFVAQNEKFINLIDEIANVLLASNAKTLEEGLALKTNSGETIEQVLVSATATIGEKIQLRRFTLIEKEAGNTTTLYNHANKRVSVALNFKGTLDSTDAYNLAMHVAAMSPQYKSIDEIPAEFKESEFSIIKAEAKEDPKLQGKPENVLENILKGKLSKRLSEISLVDQQYVVDESFKVGQFLESKKVTLIDMVRYEVGEGIEKVVTDFASEVAAQLGN
What is the function of this protein?
Associates with the EF-Tu. GDP complex and induces the exchange of GDP to GTP.  It remains bound to the aminoacyl-tRNA. EF-Tu. GTP complex up to the GTP hydrolysis stage on the ribosome.
What are the official names of this protein?
Elongation factor Ts, EF-Ts.
What is the protein family that this protein belongs to?
Belongs to the EF-Ts family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RL20_BACVZ
Sequence: MPRVKGGTVSRQRRKKVLKLAKGYFGSKHRLYKVANQQVMKSGNYAFRDRRQKKRDFRKLWITRINAAARMNGLSYSRLMHGLKLSGIEVNRKMLADLAVNDLTAFNQLADAAKAQLDK
What is the function of this protein?
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit.  It is not involved in the protein synthesizing functions of that subunit.
What are the official names of this protein?
50S ribosomal protein L20.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bL20 family.
Protein: MED6_ASPFU
Sequence: MAGPQDASLEEILWRSPPHVQMMGGYLHSNNILFYFAESPFFDATSNNASLAIQANYNEAFRHFVETREAFEGRLRTMQGLEFVVAYDPLQAAAQTDTQFAHEPSNVWVIRKQMRRKRAGQEDEVVVLATFFVVGDCIYMAPSVASVVGNRILSAVTSLTSLLKTASTLPIFTPAHGHTYLPPAPKPADAGQPGVPSQQSKENTPMPDAENPARVPLVGSQAGNTASTFQDTRTLAESLHLFLRYEDEYMDENPLVGEPGSFIMSKANDVDRTATAKQPQSTIPTKMGAPLVRVDTPGKGPEKVGTPSSSDESSLKKKKGGVGG
What is the function of this protein?
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes.  Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery.  Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity).
What are the official names of this protein?
Mediator of RNA polymerase II transcription subunit 6, Mediator complex subunit 6.
What is the protein family that this protein belongs to?
Belongs to the Mediator complex subunit 6 family.
What are the subcellular locations of this protein?
Nucleus.
Protein: GLMM2_SHESM
Sequence: MSRKYFGTDGVRGKVGTFPITPDFAMRLGWAAGTVLASTGTKEVLIGKDTRISGYMLESAMEAGFSAAGVNVALIGPMPTPAVAYLASTFRADAGVVISASHNPFYDNGIKFFSNTGTKLNDAQELEIEALLEQALEHNALQCVASEKLGKVRRIDDAAGRYIEFCKGTFPNHLSLAGLKIVVDSAHGAAYHIAPNVYRELGAEVISINDKPNGVNINDHCGATHLDSLQSAVMIHEADLGIALDGDADRVMFVDHNGHVVDGDEILFILAQAAYQKGEMQGGVVGTLMSNLGLELALKGMDIPFVRAKVGDRYVVEQLKETGWQLGGEGSGHILSLKHASTGDGIVASLQVLKAVLESGKRLAELKAEMTKLPQVLINVRLTSGCADSILSKDSVKQAVIAAEEVLGNQGRVLLRKSGTEPLIRVMVESTDISLTQQQAEYIAQAVKVA
What is the function of this protein?
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.
What are the official names of this protein?
Phosphoglucosamine mutase 2.
What is the protein family that this protein belongs to?
Belongs to the phosphohexose mutase family.
Protein: VG54_ICHVA
Sequence: MGIRKKLVQSLLFNSISQNNFGLILQNNLFGKADAVIFDHMLVMHSMCFVPISPGMDAREHIITNTLNFYTRYSKTIATASTLFILCEDGLQSVKPAVRDKRNEHVPTPALVYFKHHKAELAKALVEKMQMEGICTLFITGYNGRSMSYQYMNGTGKRPAVPVELVMDRFVADCKEVEADMMMYAMAAHYSRRYPGHLVVITTRDTDVVPSGLALLADKGPEYLGNTVIEFKTPMFNGLKDHDRAVSDFLHVSNPTNSHKLILNRFAQFTPQRFFKADGFGGGTIEGGLFNLLFDSTNISPFAALIDKFVQTTASLDAEELLGIIRFFIACLRAGFRGTIFRRIFMRYLDDDPSTRETVTKFMGAMDTAADKYALLGDFLSQTNSYIANRTIKQLSPDYDWDIIDDADQSDGLGNCTLGQPYMVTTTSLSNRCIKGLVSLAKMYNEHRLPLDSYGSYIRMQTTHGHCYVRFAPVKASTAAVVACTLAGADYNLTIPKLGSVQIMNLLLNPDFIEMCEKTRFSVEEHGAEFIWKMISMTKLRKKTPVDPGLDGYIDCVWRTLCYTIQTWQLKTPVAGPDYGFNVRDSMVYFVIDDPSAFKNVFTLGRK
What are the official names of this protein?
Uncharacterized protein ORF54.