PharMolix/UniProtQA huggingface dataset:
Protein: FAD6E_BRAJU
Sequence: MGAGGRMQVSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPLSYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEVTKAIKPILGDYYQFDGTPWVKAMWREAKECIYVEPDRQGEKKGVFWYNNKL
What is the function of this protein?
ER (microsomal) omega-6 fatty acid desaturase introduces the second double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes.  It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids (By similarity).
What are the official names of this protein?
Omega-6 fatty acid desaturase, endoplasmic reticulum, Delta(12) desaturase.
What is the protein family that this protein belongs to?
Belongs to the fatty acid desaturase type 1 family.
What are the subcellular locations of this protein?
Endoplasmic reticulum membrane; Multi-pass membrane protein.
Protein: GNA1_TRYBB
Sequence: MTDIVDLELRVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRAHERQMRLDL
What is the function of this protein?
Involved in the biosynthesis of UDP-N-acetyl-alpha-D-glucosamine.  Catalyzes the formation of N-acetyl-D-glucosamine 6-phosphate from acetyl-coenzyme A (acetyl-CoA) and D-glucosamine 6-phosphate.
What are the official names of this protein?
Glucosamine 6-phosphate N-acetyltransferase, Phosphoglucosamine acetylase, Phosphoglucosamine transacetylase, TbGNA1.
What is the protein family that this protein belongs to?
Belongs to the acetyltransferase family. GNA1 subfamily.
Protein: RIMM_ACHLI
Sequence: MLYSIGKVVQTHGIKGEVKIKPHTDFDRFVKGFDVIIKDTKYKIQTVREQKDLLLVSFVGYPTLTDVEHLKQQEIYTDEEPLDLESDAFHLPKLIGLKVYDQHNYLIGTVLELVDVPQGYLLRILRDDNGKTVLIPFIDKFIKSVDETSIHIETIEGLI
What is the function of this protein?
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region.  Probably interacts with S19.  Essential for efficient processing of 16S rRNA.  May be needed both before and after RbfA during the maturation of 16S rRNA.  It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.
What are the official names of this protein?
Ribosome maturation factor RimM.
What is the protein family that this protein belongs to?
Belongs to the RimM family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: RS7_DEHM1
Sequence: MPRRARKFKRAVAPDSRYNSLMLSNFINKLMMHGQKATAQRIVYDAIDIMGKQENKEGLAVFEQGLKNATPFIEVKPRRVGGATYQVPIEVRPDRAQTMAMRWIIKAARKRTGKSMAERLAAEMLEASREQGAAVKKREETHKMAEANRAFVHYRW
What is the function of this protein?
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.  Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.
What are the official names of this protein?
30S ribosomal protein S7.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS7 family.
Protein: ACCD_BLOFL
Sequence: MNWIERIINKNIVLTTKKMHVPEGIWTKCSGCVQLLYTKELERNLQVCPKCDFHMKISARSRLLAFLDQGSVCELGQELLPKDIFKFKDRKKYKDRLIDAQKKTQEKEALIVMQGTIYSMQVVVAAFEFDFIGGSMSSAVGSRFVQAVNQSLKLKCPFVCFSSSGGARMQEAFVSLMQMAKTSAALAVLYDRCLPYISVLTNPTMGGVSASLGMLGDINIAEPKALIGFAGPRVIEQTVREKLPLGFQRSEFLLEKGVIDLIVRRPDMRLKIANLLSKLTQQSFSEK
What is the function of this protein?
Component of the acetyl coenzyme A carboxylase (ACC) complex.  Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
What are the official names of this protein?
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, ACCase subunit beta, Acetyl-CoA carboxylase carboxyltransferase subunit beta.
What is the protein family that this protein belongs to?
Belongs to the AccD/PCCB family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: GLYA1_RHILO
Sequence: MATAAAASNKFESFFETTLEDADPEIFGAIRNELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGGCQFVDVAEELAIERAKKLFGCNFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFKVVSYGVRKEDHLLDMDAIEKTAHETKPKLILAGGTAYSRIWDWKRFREIADAVGAYLMVDMAHIAGLVAGGVHPSPLPHAHVVTTTTHKSLRGPRGGMILCNDEDIAKKMNSAVFPGLQGGPLMHVIAAKAVAFGEALKPSFKVYAESVAANAKALASSLKETGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFGQAEFREIGKLIAEVLDGLKIANSDEGNAAVEAAVKAKVVALTDRFPLYPYLG
What is the function of this protein?
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier.  This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules.  Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
What are the official names of this protein?
Serine hydroxymethyltransferase 1, SHMT 1, Serine methylase 1.
What is the protein family that this protein belongs to?
Belongs to the SHMT family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MEND_SHEON
Sequence: MRTENTATLNLMWGALILEELARLGVQHVCMAPGSRSTPLTLAAAKQTKLKRHLHFDERGLGFMALGLAKASSAPVAIITTSGTAVANLYPAIVEAWLTHVPLIVLSGDRPPELLGCGANQAIVQPAIFANYAQQVNLPTPDAHIAPQMLLTTLDEAVANQTRPVHINCMYREPLYPSELTATILDSESPYLKPLQTWLQQARPYTIYGKREQLSHPSEDAIMRFVHGKGVIIAGTLTPEQDPQQLIALSQKIGWPLLTDAQSQLRQHPAAIGNIDQLLQHPKARNLLQEADRVLVFGGRLLSKRLIAYLAEQNWHSYWQVLPQQDRLDPSHNAKHIWHANAAQFAQLNWYRSSSANWANTLITYNDDLHHLFVRNIDQGEFGEAQVIRAIANTRPLEQQLFIGNSLPVRLYDMYAPVSCCTATTYTNRGASGIDGLLATACGIAAHQGKPTSLIIGDLSQLHDLNSFAIARSLTSPLVIIILNNDGGNIFNLLPVPNEELRSDYYRLSHGLEFGYAAAMFNLPYNQVDNLADFQTCYNEALDFQGASVIEVTVSQHQASEQIAALNLWVKQS
What is the function of this protein?
Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).
What are the official names of this protein?
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase, SEPHCHC synthase, Menaquinone biosynthesis protein MenD.
What is the protein family that this protein belongs to?
Belongs to the TPP enzyme family. MenD subfamily.
Protein: YDH2_XANAU
Sequence: MSVFAGAAAMLPNPKPFFELIPDPRRATPNKLHSLSDILSIALCAVLSGMDDWEAVAEFGRTKEGWLRQFLPLANGIPSHDTFGRVFSLIDPEAFEAAFFDWAAHARIGGDVLDQLALDGKTVRRSHRGSAGRALHLLHAWSCETRLLVAQRRVDTKSNEITAIPDILSLFDLRGVTISIDAIGCQKAVARQITEAGGDYVLALKGNQSALHDDVRLFMETQADRHPQGQAEAVEKDHGRIETRRIWVNDEIDWLTQKPDWPGLKTLVMVESRRELNGQVSCERRCFITSHTADP
What are the official names of this protein?
Uncharacterized protein in dhlA 3'region.
Protein: APCE_CYAPA
Sequence: MTSVSGGSPLLRPQLYRTVTVSTILQADQQDRFLESGELSQLATYLTSGNKRLDIIITLTNNSEAIVSRAANRIFVGGSPISYLERPQSGIDAKLGTNSYVESQSGFLEGFRSLFNTGGADITPAGFKPINVSRYGITRMQKSLRDLDWFLRYITYAIVAGDPNILVTNIRGLREIIENACSSAVTLVALQEMRRASLSYFTKDASAEAIVKQYFDVVITEFLAPAPSDLVRKRTSTSLQGLKLPQIYANAVVQKPRFQMKSTLSTTEKETVIKAVYRQIFERDVRRAYSLKNYDLESKVKNGQLSIKEFVRALGKSKLYAQQFYEPFINSRALELAFRHFLGRGPGSREEVQEYFALISKGGLPLLVDALVDSKEYEEYFGEEIVPYLRTLGEEAQECRNWGAQIKLLNYSARFQKTPQFITLFAGYKNPLPDQHPYGQGNDPLEIQFGAIFPKETLQTKAAFFGKDTRRILIRRGNGIDNQLSNPSARQKSPGSFGPKVFKLSSVASLNKNTKNVSFGETSTQAIIKAVYLQIIGRETYESQRLKVWEIKLENGEISIREFVKQVAKSNLFRSLYWTPYYVCKSIEYINRRILGRPTYGRSEINKLFDIAAKKGFYALIDTLMDSPEYDESFGENTVPYERYLTPGGLALRIKRPNLSVSKEAKNELRFIELGAINESRGERSIQLRIQQGVSKRREQTKIFKLNHHDDKVNLEKVIKAVYRQVFERDMDMYRIQNEFTVFESRLKNKEISVKEFVEALGQSQLYQKEFYTPYPNTKVIELAMKHFLGRAPKNQIEIRKYNQLLASNGIAALIRSLVSSLEYAEVFGEDTVPYRRFPTFPATNFPNTEKLYNSLTKQTKTISNPSFAPEKTRRIDLLSPGA
What is the function of this protein?
This protein is postulated to act both as terminal energy acceptor and as a linker polypeptide that stabilizes the phycobilisome architecture.  May have intrinsic bilin lyase activity (By similarity).
What are the official names of this protein?
Phycobiliprotein ApcE, Anchor polypeptide, PBS-anchor protein, Phycobilisome linker polypeptide.
What is the protein family that this protein belongs to?
Belongs to the phycobilisome linker protein family.
What are the subcellular locations of this protein?
Plastid, cyanelle thylakoid membrane; Peripheral membrane protein; Stromal side.
Protein: ESPJ_MYCTU
Sequence: MAEPLAVDPTGLSAAAAKLAGLVFPQPPAPIAVSGTDSVVAAINETMPSIESLVSDGLPGVKAALTRTASNMNAAADVYAKTDQSLGTSLSQYAFGSSGEGLAGVASVGGQPSQATQLLSTPVSQVTTQLGETAAELAPRVVATVPQLVQLAPHAVQMSQNASPIAQTISQTAQQAAQSAQGGSGPMPAQLASAEKPATEQAEPVHEVTNDDQGDQGDVQPAEVVAAARDEGAGASPGQQPGGGVPAQAMDTGAGARPAASPLAAPVDPSTPAPSTTTTL
What is the function of this protein?
Could be involved in regulation of growth and intracellular survival.
What are the official names of this protein?
ESX-1 secretion-associated protein EspJ, TB27.4.
What are the subcellular locations of this protein?
Secreted.
Protein: SYK_RUTMC
Sequence: MSDQDNNKLIIERKSKLALLREAGNPFVNNFKPENLAQDIIQKFDSSSKEALAQKNVQVSIAGRMMLKRVMGKASFVHVQDSSGQIQLFITRDELPENFYNEQFKKLDIGDIVGATGVLFKTSVGELSIRISDIKLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNKTSRNTFKRRSQIVSYIRNFFNNHDFIEVETPMLQTIPGGAIAKSFETHHNALDMPMYLRIAPELYLKRLIVGGMDRVFEVSRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMNLTEKLFRGIAFDVYGSANIHYQGNDFDFSKPFECISVFDSILQYNPNLTATNLNQDNAKKIAEKLGIQVKENWGLGKIQIEIFEATVEEKLIQPTFITEYPTEVSPLARCNDDNPFITDRFELFIGGREIANGFSELNDAENQAERFKKQVEEKDASDDEAMQYDADYIRALEYGMPPTAGEGIGIDRLVMLFTNSPSIRDVLLFPHMRSEIGK
What are the official names of this protein?
Lysine--tRNA ligase, Lysyl-tRNA synthetase, LysRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: UFL1_CAEBR
Sequence: MTSWADIQKLASDLQRVQLTQSSKKLSEVNCIEVLQKLIASQQIDVVYTRDGHTYVTKKHLETEIKNECVAAGGRAPLTDIAVALNIDFDHIERTARLIVSSDDEFTLSNAELFATGYSLCRTKISISVNTCIASATNFALFSMNKSLLIEKLSSTDFEGVVDGDTIYTSSFLDARQLVLRAVLVALTKVTPISTIQKRVGLTPKRFWIAFENLQALGEVPGTLIGSRTSPACSYRPKMYDYLVKTCVTNQYRQNEFLQMSTLKTLGLDSKTALEEVLGASEVKKLVNLNSIYMSKELMEQCVQTVQGEARNITLNTDYIVFVPDDIQNSGIAEIRMSLQTLNLPLDTADEDLIGEKIASTEKDTNFSDGFVYNNSILTEALKSINTQIEAKAHQEVEKIDVEKKKQCGSKAPAKVQEDTDDWGDNKKGGKGGKKGGKGGKNGGGGGKGATSSVPTGSGTVQVNSEELEEWLRESQTVPEEILTVVVETLHQDATSALRKQVQEIQALQLVVNAANSKKSLSAIGDKCRQLYDSFNTFEAGTTSFADPLGTDLRQYLLKTVGVDLACAILSYAIGIDNVHQLKEKQRDETIESLPEMVREPIRALFASLKSTDEDAVEKFHDAVYDCSVPSATSLSLRKIDKKGRAEVGVKVSADLCDQLASQSDPATTLLLSVLYLFSQAGRPTTASGKFVAQLIAQMKDFCPTNTFELLQSCQKGVVTCIKNQDDDVAKEILSEDIEKLKSAVLQ
What is the function of this protein?
E3 UFM1-protein ligase that mediates ufmylation of target proteins.
What are the official names of this protein?
E3 UFM1-protein ligase 1 homolog, E3 UFM1-protein transferase 1 homolog.
What is the protein family that this protein belongs to?
Belongs to the UFL1 family.
Protein: HISX_LACLA
Sequence: MLKQIDYQGKLEEIAEKFQGRKTEVSKEVNKTVQQIVADIQKNGDTALFNYAKKFDGYDVNTSNLLVTRMEREAGLEQIDEDYFRILRRTKSQIEEFHKHQLGNSWNIFKENGVIMGQIARPLERVALYVPGGTAAYPSTVIMNAVPALLAGVKEIIMITPVKADGKVNPNILAAAEVCGIETIYKVGGAQGVAAVAYGTESIPKVDKIVGPGNIFVATAKKICYGVVDIDMIAGPSEVLVIADKTAKPKYIAADLMAQAEHDKLASAILVTTSEKLVQQVDEELNRQVQNLERREIIESSIRNYGGAIVVKNIDDAFDVSNQLAPEHLEVLTSEPLTQLPKIKNAGSIFIGEYTPEPLGDYMSGSNHVLPTGGTAKFYSGLGVYNFIKYLTYSYYPKEVLADFKEDVETFAKSEGLTAHANSISVRFDEM
What is the function of this protein?
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine.
What are the official names of this protein?
Histidinol dehydrogenase, HDH.
What is the protein family that this protein belongs to?
Belongs to the histidinol dehydrogenase family.
Protein: QCRA_COREF
Sequence: MSNNTNKQYTTQELNSMSNDDLARLGTELDDVTIAYRKERFPVANDPAEKRAARSVGIWAALGILGGIGFLITYIFWPWEYQGHGDDGLMWYTLYTPMLGITSGLCIISLGIAGVLYVKKFIPEEIAVQRRHDGPSEEVDRRTLVALLNDSWQTSTLGRRKVLQGLLAGGAVMAGLTIVAPLGGMIKNPWRPQDGPMDVMGDGTLWTSGWTLQEQGVKLYLGRDTGAIAESHTGESGQHWITTGVSRLVRMRPEDLAAASMETVFPLPAEDVNDGDLYDPQRDVYTNHMHSIHGPRNAVMLIRLRTADAERVIEREGQESFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPAARALPQLPITVDEEGYLIADGNFIEPLGPAFWERKS
What is the function of this protein?
Iron-sulfur subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis.  The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain.  The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis.
What are the official names of this protein?
Cytochrome bc1 complex Rieske iron-sulfur subunit, Cytochrome bc1 reductase complex subunit QcrA, Menaquinol--cytochrome c reductase iron-sulfur subunit, Rieske iron-sulfur protein.
What is the protein family that this protein belongs to?
Belongs to the Rieske iron-sulfur protein family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: GAG_HV2G1
Sequence: MGARNSVLRGKKADELEKIRLRPSGKKKYRLKHIVWAANELDKFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCLHAEEKVKDTEEAKKLVQRHLGAETGTAEKMPSTSRPTAPPSGRGRNFPVQQTGGGNYIHVPLSPRTLNAWVKLVEDKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINDEAADWDAQHPIPGPLPAGQLRDPRGSDIAGTTSTVEEQIQWMYRPQNPVPVGNIYRRWIQIGLQKCVRMYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLTACQGVGGPGQKARLMAEALKEALTPPPIPFAAAQQRKVIRCWNCGKEGHSARQCRAPRRQGCWKCGKTGHVMAKCPERQAGFLGMGPWGKKPRNFPVAQAPPGLIPTAPPADPAVDLLERYMQQGREQREQRERPYKEVTEDLLHLEQGKAPHREATEDLLHLNSLFGKDQ
What is the function of this protein?
Plays a role in budding of the assembled particle by interacting with the host class E VPS proteins TSG101 and PDCD6IP/AIP1.
What are the official names of this protein?
Gag polyprotein, Pr55Gag.
What is the protein family that this protein belongs to?
Belongs to the primate lentivirus group gag polyprotein family.
What are the subcellular locations of this protein?
[Gag polyprotein]: Host cell membrane; Lipid-anchor. Host endosome, host multivesicular body. Note=These locations are probably linked to virus assembly sites. The main location is the cell membrane, but under some circumstances, late endosomal compartments can serve as productive sites for virion assembly. SUBCELLULAR LOCATION: [Matrix protein p17]: Virion membrane; Lipid-anchor. Host nucleus. Host cytoplasm. SUBCELLULAR LOCATION: [Capsid protein p24]: Virion. SUBCELLULAR LOCATION: [Nucleocapsid protein p7]: Virion.
Protein: GATB_PROMP
Sequence: MKNLEPWEAVIGLETHVQLNTKSKIFTAASTAFGDEPNTHIDPVVCGLPGTLPVLNKTVLEYAVKTSLALNLNVAEHCKFDRKQYFYPDLPKNYQISQFDEPLAENGWLEVEIAEKDKETYLKKIGIERLHMEEDAGKLVHIGSDRLAGSKYSLVDYNRAGIALVEIVSKPDIRTGREASEYASEIRRTVRYLGVSDGNMQEGSLRCDVNISVRRGPNAPFGTKVEIKNMNSFSAIQKACEYEIERQIDVYENGGEIYQETRLWDEAKQLTKSMRLKEGSSDYRYFPDPDLGPIEISKEQKDQWLDELPELPSKKRQKYVKELGLSPYDSRVISDEVFMANFFEETVANGADPKLASNWITSDIVGYLKSNKQSFAELKLSPINLAEMINMISKKVISGKIAKEILPELIQDNISPQKVVEEKGLAMISDSASISPIIEELIIEYPKEVKSFKDGKTKLLGFFVGQLMKKTKGKADPKLANKLISEKLNS
What is the function of this protein?
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases.  The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).
What are the official names of this protein?
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Asp/Glu-ADT subunit B.
What is the protein family that this protein belongs to?
Belongs to the GatB/GatE family. GatB subfamily.
Protein: XERDL_STREM
Sequence: MIAFIEPFLASKSLANNSQQSYRYDLRQFCQQVGQRINPETLALYQQSLSGLTVAAKKRKLSTVNQFLYYLYQQRVLADYFKMDDRIEASFSLKPQLTRLDTSAFYAETAFLKGQLIALLILELGLTPSEIAGLRLADFDLGLQVLRLQSHRGIRVMTLSRTLLPFLERAAEAQQLYLFDHDAKPFSRQWFFNQLRDFLESIGCAELSAQSLREQFILNEKAAGKSIIEVAQLLGLKSPITLEKYYKM
What is the function of this protein?
Putative tyrosine recombinase.  Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site.
What are the official names of this protein?
Tyrosine recombinase XerD-like.
What is the protein family that this protein belongs to?
Belongs to the 'phage' integrase family. XerD-like subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: EFG_CHLTE
Sequence: MARQVALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVHEGGATMDWMEQEKERGITITSAATTCFWTPKYGNYAGLNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAIRERLGANPVPIQIPIGQGEVFAGFVDLIRMKGIIYDKEDGSTYTEVEIPHDLENEARTWRINMLEAVSELDETLLEKYLNGEDITEEEIRTVLRQATLGVTIVPVLCGSSFKNKGVQFMLDAVIDYLASPVDDGEVEGHDPKTEEPIVRQPKDEEPFAALAFKIATDPFVGKLTFFRVYSGVLNAGSYVLNSTTGKKERVGRVLQMHSNKREERDAVYAGDIAAAVGLKDVRTGDTLCDESKPIVLEKMVFPEPVIEIAVEPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVEANVGQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGVIPKEYIPAVNAGIQEAMKDGVVAGFPMQDIKVTLIDGKYHEVDSSEMAFKIAGSIGFKGAAKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEGMGQRAGAQFVSAKVPLSQMFGYSTDLRSMTQGRANYSMEFESYREVPRNIAEALQEKRVGKDSE
What is the function of this protein?
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation.  During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively.  Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
What are the official names of this protein?
Elongation factor G, EF-G.
What is the protein family that this protein belongs to?
Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: HLDE_COXBN
Sequence: MADKIDISLYEKARIVVYGDIMLDRYWYGQASRISPEAPIPVVNVDQIEARPGGAANVALNVVALGASVELMGVVGDDQESRELETLLNKKSINCHFHRLNDHPTVTKLRVLGQNQQLLRLDFEKTLKHYEDKGLLQRYQHSLSHAQAVILSDYAKGALFNVTALIQRAREKGLPVLVDPKSVDFSRYAGATLLTPNLKEFEAVVGHCRTDQELESKARALIHQYRFEAILITRGKQGMMLIQKEGAAINLVAHAREVYDVTGAGDTVIAVMAASLAAGGDFYEAAQLANLAAGLVVRKLGAATVTVPELRRALHQITASHHGILSEKALLLAVADARAHGETIVMTNGCFDILHAGHVHYLEAAKAMGHRLIVAVNDDNSVRRLKGKDRPINSLQARMEVLTALRAIDWVVPFSEDTPARLITEVLPNILVKGGDYQPSQIAGGDEVVKNGGKVLTIPIKEGFSTSRLVEKMLN
What is the function of this protein?
Catalyzes the ADP transfer from ATP to D-glycero-beta-D-manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
What are the official names of this protein?
Bifunctional protein HldE.
What is the protein family that this protein belongs to?
In the C-terminal section; belongs to the cytidylyltransferase family.
Protein: LUXS_SHESR
Sequence: MPLLDSFTVDHTRMNAPAVRVAKHMSTPKGDAITVFDLRFCAPNKDILSERGIHTLEHLFAGFMRDHLNGSDVEIIDISPMGCRTGFYMSLIGEPSERQVADAWLASMEDVLKVVEQSEIPELNEYQCGTYQMHSLEQAQDIARNIIAAGVSVNRNDDLKLSDEILGQL
What is the function of this protein?
Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment.  The regulation of gene expression in response to changes in cell density is called quorum sensing.  Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD).
What are the official names of this protein?
S-ribosylhomocysteine lyase, AI-2 synthesis protein, Autoinducer-2 production protein LuxS.
What is the protein family that this protein belongs to?
Belongs to the LuxS family.
Protein: COF3_DICDI
Sequence: MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA
What is the function of this protein?
Controls actin polymerization and depolymerization.
What are the official names of this protein?
Cofilin-3.
What is the protein family that this protein belongs to?
Belongs to the actin-binding proteins ADF family.
What are the subcellular locations of this protein?
Cytoplasm, cytoskeleton.
Protein: DNLJ_SHEAM
Sequence: MSGPAHFQGTIMQVKAEIQRLTAEINRHNIAYYVQDAPSIPDAEYDRLMNQLKALEAEYPQFAEPDSPTQRVGGAALNKFEQVSHLKPMLSLDNAFNEEDFVAFDKRLTDKVGSQVYCAEPKLDGLAVSLIYRNGVLERAATRGDGAVGEDISVNMRTIKSVPLRLQGDDIPALVEVRGEVFMPRAAFEALNDRARAKGDKLFVNPRNAAAGSLRQLDSKITAERSLAFYAYALGVVQDDNGADLVLAPTHKGQLERLTAFGLPVSKEVKLCEGLAEVMAYYADILKRRDELAFEIDGVVIKVNDIEAQQQLGFVARAPRWAIAFKFPAQEEMTVLEGVDFQVGRTGAVTPVARLKPVFVGGVTVSNATLHNGDEIARLGVKIGDTVIIRRAGDVIPQIVAVVPERRPDEAQDILFPDNCPVCGSLVERIEGEAVARCSGGLFCEAQRREAIKHFASRKAMYIDGMGDKVVEQLIDKELVESPADLFKLNVSKLTMLERMGTKSATNLVAAIEEAKTTTLPKFLYALGIREVGEATAANLAKHFRSLEAIRDADVDALIQVEDVGTVVAQHVAHFFAQPHNLEVIDALIAAGVNWPAIEKPSADAQPLLGQTWVLTGTLTSLGRTEAKAKLEALGAKVAGSVSKNTHCVVAGEAAGSKLAKAQELGIPVLDEAGLIELIGL
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
Protein: RL4_BACC4
Sequence: MPKVTVYNQTGSQVGEIELAEAIFGIEPNEAVLFEAVMMQRASLRQGTHKVKTRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGTVFGPTPRSYAYKLPKKVRRLAIKSALATKVVENNIVVLEDLVLNAPKTKDMLAVLKGLTVEKKALIVTADANESVELSARNIPGVTVITADGVNVLDVLHHDKLIMTKAAVEKVEEVLA
What is the function of this protein?
Forms part of the polypeptide exit tunnel.
What are the official names of this protein?
50S ribosomal protein L4.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uL4 family.
Protein: H2AV3_ORYSJ
Sequence: MAGKGGKGLLAAKTTAAKSAEKDKGKKAPVSRSSRAGLQFPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE
What is the function of this protein?
Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A.  May replace conventional H2A in a subset of nucleosomes.  Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template.  Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability.  DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity).
What are the official names of this protein?
Probable histone H2A variant 3.
What is the protein family that this protein belongs to?
Belongs to the histone H2A family.
What are the subcellular locations of this protein?
Nucleus. Chromosome.