PharMolix/UniProtQA huggingface dataset:
Protein: RNP4_METPE
Sequence: MTVKSQNRQTKKLAGERIAILFTQAKVFAGINPAWSDRCVERARAIAMRQRMRMEREQRRQYCHHCYAYFLHGVNVRVRVHRGHVIVTCLNCGRQTRYQVVRTDNR
What is the function of this protein?
Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
What are the official names of this protein?
Ribonuclease P protein component 4, RNase P component 4, Rpp21.
What is the protein family that this protein belongs to?
Belongs to the eukaryotic/archaeal RNase P protein component 4 family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: Y4585_MYCA9
Sequence: MTSTDQGSWARSEGDSWDIVSSVGYTALGVSAQRAVESERPDALIDDPFAKHFVLAAGEPHLIETITKRDAPQASPFEYLRGMGMRSRFFDEFFLEAAASGITQAVILAAGLDARAHRLAWPAGVTVYELDQPQVLAFKDGVYAQQGAEPTCDRRTVAVDLRDDWPAALKEAGFDAGRPTAWSAEGLLPYLPAAAQELLFERMVELSAPGSRAAIEGPTGTLGMSQFAKVEQKYRSEKDTFGKIDITELFYDEEKTPPVEWFSVRGWSTQGLDMFDLAERYGVRHPEVPEDIRELAGAMHYLTCTLPA
What is the function of this protein?
Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
What are the official names of this protein?
Putative S-adenosyl-L-methionine-dependent methyltransferase MAB_4585c.
What is the protein family that this protein belongs to?
Belongs to the UPF0677 family.
Protein: SHFL_DANRE
Sequence: MSRMHEEVELEKSVRRLREKFHGLIEIDTAVLLMRRYVKNHRMVAMWIALMADNDRELDEEDQAALNNDPVAKNVIMKLKAEEQQQEEKHAKSSSSGSSGAGPSAKAKKQPSDDRDITELGTRLRVLPLTMENKRMFDQAQANQIPSDTHQFACESCDRDWWRRVPQRKRVSRCHRCKKKNDPVPPDRMWGIAEFTCPNCTRNFKGFGRMDGRSPCYGCRSAIYPMKILPPRRKNMMPGPKQRNQHSCFAEDCYHRMEPHVPGTECVHPHSRQKNRKPRVVYPSPAHISSGSTVNTCLSQGSLIESINELILDDIEEESEDDSDSSS
What is the function of this protein?
Inhibits programmed -1 ribosomal frameshifting (-1PRF) of a variety of mRNAs from viruses and cellular genes.  Interacts with the -1PRF signal of target mRNA and translating ribosomes and causes premature translation termination at the frameshifting site.  May exhibit antiviral activity.
What are the official names of this protein?
Shiftless antiviral inhibitor of ribosomal frameshifting protein homolog, SHFL, Repressor of yield of DENV protein homolog.
What is the protein family that this protein belongs to?
Belongs to the SHFL family.
What are the subcellular locations of this protein?
Cytoplasm. Nucleus. Cytoplasm, P-body. Note=Predominantly found in t for dsDNA.
Protein: ULAF_ECOSM
Sequence: MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKAADMVVVDMSGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSYLMNKHFMRKHGPNAYYGQK
What is the function of this protein?
Catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate.  Is involved in the anaerobic L-ascorbate utilization.
What are the official names of this protein?
L-ribulose-5-phosphate 4-epimerase UlaF, L-ascorbate utilization protein F, Phosphoribulose isomerase.
What is the protein family that this protein belongs to?
Belongs to the aldolase class II family. AraD/FucA subfamily.
Protein: PUR7_GLUOX
Sequence: MARRRQLYEGKAKVLFEGPEPGTLVQYFKDDATAGNGAKSGIITGKGVLNNRISEYLMLKLHEINIPTHFIRRLNMREQLIREVEIIPLEVVVRNVAAGSLSKRLGIPEGTRLPRTIIEYYYKNDALGDPMVSEEHIAAFNWAAPQDMDDMNQLALRTNDFLMGMFTAVGITLVDFKLEFGRIWEGEEMRILLADEISPDNCRLWDSKTNEKMDKDRFRRDMGRVEEAYQEVAKRLGILPESGNGDLKGPEAVQ
What are the official names of this protein?
Phosphoribosylaminoimidazole-succinocarboxamide synthase, SAICAR synthetase.
What is the protein family that this protein belongs to?
Belongs to the SAICAR synthetase family.
Protein: RS16_ALIB4
Sequence: MTVIRLTRMGRNKKPFYRIVVTDSRKRRDSGWIESIGYFNPVVEPKVLKIDEERYNYWLSVGAKPSEKVKKLASK
What are the official names of this protein?
30S ribosomal protein S16.
What is the protein family that this protein belongs to?
Belongs to the bacterial ribosomal protein bS16 family.
Protein: SYHC_NOSCE
Sequence: MSLKTPKGTTDLNPDDALVYEDLIDRTKNIFKLHGAVPIDTPVFELKSILLNKYGEDTKLIYDLKNNGGEECALRYDLTVPFSRYMSMNKLKKIKRYQIGKVYRRDQPSVVQGRWREFLQADFDIAGESLPMMADSELVCCMNRLLKTYNIGDFVIRVSDKRILYGIFEVCEIPNNLFATVSSSIDKLDKIAVNDINKELKLKGLTDKQIINLNIYIQKSGTVDVLDFLRENDVYKKCSEAVDDLCKLYEYCKIMKCSDHLIIDLSLARGLDYYTGMIIEGKYLNKNIGSVAGGGRYDNLIGSLENSSYTNTYNVPCAGFSIGLSRIFSCIQKPKVNTNVKVFISASGKLLLEERLKIQSILWEANISLETFYNKRNNPGEHKKYCVKHGIKYLIVVKEEQYNKGFVTVIEVNTNLENVIMIDNLPSHLQ
What are the official names of this protein?
Probable histidine--tRNA ligase, cytoplasmic, Histidyl-tRNA synthetase, HisRS.
What is the protein family that this protein belongs to?
Belongs to the class-II aminoacyl-tRNA synthetase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: SERC_ARATH
Sequence: MEALTTSRVVPVQVPCRKLSSLFANFSCLELRRYPCRGLVSIMNHPKLLRPVTASVQPHELSTLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNIDVYLISGGFRQMINPVASILGIPRENIFANNLLFGNSGEFLGFDENEPTSRSGGKAKAVQQIRKGRLYKTMAMIGDGATDLEARKPGGADLFICYAGVQLREAVAANADWLIFKFESLINSLD
What is the function of this protein?
Catalyzes the last step in the plastidial phosphorylated pathway of serine biosynthesis (PPSB).  The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates.  Required for embryo, pollen and root development.  May be required preferentially for serine biosynthesis in non-photosynthetic tissues.
What are the official names of this protein?
Phosphoserine phosphatase, chloroplastic, PSP, PSPase, O-phosphoserine phosphohydrolase.
What is the protein family that this protein belongs to?
Belongs to the HAD-like hydrolase superfamily. SerB family.
What are the subcellular locations of this protein?
Plastid, chloroplast.
Protein: AROQ_CLOBJ
Sequence: MNNILVINGPNLNLLGKREPDIYGNITLENINQKIKLHFKNEDLKIDFFQSNEEGKIIDKIIESEKKYNAIVINPAAYSHYSIAILDAMRSINIPVVEVHLSNIYKREEYRKKSVTAEASLGVISGFGYYGYIMAIEFILNNLVREK
What is the function of this protein?
Catalyzes a trans-dehydration via an enolate intermediate.
What are the official names of this protein?
3-dehydroquinate dehydratase, 3-dehydroquinase, Type II DHQase.
What is the protein family that this protein belongs to?
Belongs to the type-II 3-dehydroquinase family.
Protein: RBSU_LATSS
Sequence: MNAVNILIGLMPMIGWGIFPVIVGKIGGKPASQILGTTFGTLILAIVVAIFRGTPIPETKTFIFCLISGACWALAQIITFHVFETMGVSRTMPITTGFQLVGASLWGVFVLGNWSSSQSKLIGFTAIALIIIGVYLTAWSEDKSSASKSGAVKGILLLLVGELGYLGYSAFPQAVSADGFQGFLPQAIGMTIVGIIFGLTQTKKDYKPFKEATSYKNIFSGFFFAFAALTYLISAQPSVNGLATGFVLSQTSVIFATIGGIYILKEKKSKKEMIAVMVGLLLVLVAGSVTAFIK
What is the function of this protein?
Could be involved in the uptake of ribose.
What are the official names of this protein?
Putative ribose uptake protein RbsU.
What is the protein family that this protein belongs to?
Belongs to the GRP transporter (TC 2.A.7.5) family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: NS2_AADNV
Sequence: SVSAFFVGSMTHSVNPGGENWIWESQLEVREEWPTITNNQGTKIYIAPRQYLLQLRCKQTPSRSEISEKISQIKPLITSTHNYTAAPEPLNSLNSHFQLLEQEAGKYLYVNLTNISSQIIRKKIFNHILDVFEDSYSPKKLWIITGHRQAQPKCYETTSKDAVLKALLTAQAKITEMELMGRASPPWIYKATVLLTHMAMNRQQAVRPERYEQQPRQNQVNQKNIKAAIINKIYKNKAVPPPSPTDTISSTESWMEEVNQIEKQHTTHSSSTKITAKRTGDISPQQGPSKRRALSPLITETTSTSSSHHQTQEETAQESEPESPSFLVQQAQEMQKRLSLFPKLNFSGTTFSIASVTVSKQSISMEIKSNNN
What are the official names of this protein?
Non-structural protein NS2, Non-capsid protein NS-2, NCVP2.
Protein: Y273_METKA
Sequence: MESPVKEHREGTLIRVRVNPDADTTDLKGVDEWRGVLEVDVAAPPVKGKANRELLEFLGRKLNTTCELVSGEKSREKLVLARDVSVDEVKERLGLR
What are the official names of this protein?
UPF0235 protein MK0273.
What is the protein family that this protein belongs to?
Belongs to the UPF0235 family.
Protein: PROB_KLEP7
Sequence: MSESQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAMGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNSIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQPGLFTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGNRPDVIGHAMAGLPVGTCFHAQESPLENRKRWIFGAPPAGEITVDAGATQAILERGSSLLPKGIKIVSGNFSRGEVIRIRNSEGRDIAHGVSRYNSDALRLIAGQHSQQIDAILGYEYGPVAVHRDDMIIR
What is the function of this protein?
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
What are the official names of this protein?
Glutamate 5-kinase, Gamma-glutamyl kinase, GK.
What is the protein family that this protein belongs to?
Belongs to the glutamate 5-kinase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: APCF_PORPU
Sequence: MQDAITAILNRYDLTGRYLDKAAVTQLESFFSSGLDRIKIAEIINNQATNILKEASAQLYEEQPELLRPGGNSYTTRRYAACLRDIEYYLRYTSYALIAGNTNILDQRVLNGLKDTYNSLSVPLAPTVRSIQLLQEIIEEELELQSITRKDIVQEPFQHLINALSEQDL
What is the function of this protein?
Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.  Allophycocyanin has a maximum absorption at approximately 650 nanometers (By similarity).
What are the official names of this protein?
Allophycocyanin subunit beta-18, Allophycocyanin subunit B18.
What is the protein family that this protein belongs to?
Belongs to the phycobiliprotein family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side. Note=Forms the core of the phycobilisome.
Protein: EFP_HELPH
Sequence: MAIGMSELKKGLKIELGGVPYRIVEYQHVKPGKGAAFVRAKIKSFLDGKVIEKTFHAGDKCEEPNLVEKTMQYLYHDGDTYQFMDIESYEQIALNDSQVGEASKWMLDGMQVQVLLHNDKAISVDVPQVVALKIVETAPNFKGDTSSASKKPATLETGAVVQVPFHVLEGEVIKVNTETEEYLEKVK
What is the function of this protein?
Involved in peptide bond synthesis.  Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro.  Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
What are the official names of this protein?
Elongation factor P, EF-P.
What is the protein family that this protein belongs to?
Belongs to the elongation factor P family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: MYSM1_HUMAN
Sequence: MAAEEADVDIEGDVVAAAGAQPGSGENTASVLQKDHYLDSSWRTENGLIPWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKSLQKTAKIMVHSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKTGHNLQVKNEDKGTKAWTPSCLRGRADPNLNAVKIEKLSDDEEVDITDEVDELSSQTPQKNSSSDLLLDFPNSKMHETNQGEFITSDSQEALFSKSSRGCLQNEKQDETLSSSEITLWTEKQSNGDKKSIELNDQKFNELIKNCNKHDGRGIIVDARQLPSPEPCEIQKNLNDNEMLFHSCQMVEESHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQTVDKVRIRDRKDAVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELAKRREEEKGRPVKSLKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGSYRLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLECMRKTLSKVTNCFMAEEFLTEIENLFLSNYKSNQENGVTEENCTKELLM
What is the function of this protein?
Metalloprotease with deubiquitinase activity that plays important regulator roles in hematopoietic stem cell function, blood cell production and immune response (PubMed:24062447, PubMed:26220525, PubMed:28115216).  Participates in the normal programming of B-cell responses to antigen after the maturation process (By similarity).  Within the cytoplasm, plays critical roles in the repression of innate immunity and autoimmunity (PubMed:33086059).  Removes 'Lys-63'-linked polyubiquitins from TRAF3 and TRAF6 complexes (By similarity).  Attenuates NOD2-mediated inflammation and tissue injury by promoting 'Lys-63'-linked deubiquitination of RIPK2 component (By similarity).  Suppresses the CGAS-STING1 signaling pathway by cleaving STING1 'Lys-63'-linked ubiquitin chains (PubMed:33086059).  In the nucleus, acts as a hematopoietic transcription regulator derepressing a range of genes essential for normal stem cell differentiation including EBF1 and PAX5 in B-cells, ID2 in NK-cell progenitor or FLT3 in dendritic cell precursors (PubMed:24062447).  Deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, leading to dissociation of histone H1 from the nucleosome (PubMed:17707232).
What are the official names of this protein?
Deubiquitinase MYSM1, 2A-DUB, Myb-like, SWIRM and MPN domain-containing protein 1.
What is the protein family that this protein belongs to?
Belongs to the peptidase M67A family. MYSM1 subfamily.
What are the subcellular locations of this protein?
Nucleus. Cytoplasm. Note=Localizes to the cytoplasm in response to bacterial infection.
Protein: HLDD_ECO57
Sequence: MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA
What is the function of this protein?
Catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose.
What are the official names of this protein?
ADP-L-glycero-D-manno-heptose-6-epimerase, ADP-L-glycero-beta-D-manno-heptose-6-epimerase, ADP-glyceromanno-heptose 6-epimerase, ADP-hep 6-epimerase, AGME.
What is the protein family that this protein belongs to?
Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
Protein: FRUG_BIFLO
Sequence: MTTATANKVKAPKKGFKLDRQMIPTLAAVVIFILMIIMGQALFGTYIRLGFISSLFIDHAYLIILAVAMTLPILTGGIDLSVGAIVAITAVVGLKLANAGVPAFLVMIIMLLIGAVFGLLAGTLIEEFNMQPFIATLSTMFLARGLASIISTDSLTFPQGNDFSFISNVIKIIDNPKISNDLSFNVGVIIALVVVVFGYVFLHHTRTGRTIYAIGGSRSSAELMGLPVKRTQYIIYLTSATLAALASIVYTANIGSAKNTVGVGWELDAVASVVIGGTIITGGFGYVLGSVLGSLVRSILDPLTSDFGVPAEWTTIVIGLMILVFVVLQRAVMAVGGDKK
What is the function of this protein?
Part of the high-affinity ABC transporter complex FruEKFG involved in fructose uptake.  Can also transport ribose and xylose, with lower affinity.  Probably responsible for the translocation of the substrate across the membrane.
What are the official names of this protein?
Fructose import permease protein FruG.
What is the protein family that this protein belongs to?
Belongs to the binding-protein-dependent transport system permease family.
What are the subcellular locations of this protein?
Cell membrane; Multi-pass membrane protein.
Protein: PSBE_CALFG
Sequence: MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDPLAQLDEFSRSF
What is the function of this protein?
This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII).  PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation.  It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
What are the official names of this protein?
Cytochrome b559 subunit alpha, PSII reaction center subunit V.
What is the protein family that this protein belongs to?
Belongs to the PsbE/PsbF family.
What are the subcellular locations of this protein?
Plastid, chloroplast thylakoid membrane; Single-pass membrane protein.
Protein: PTN_BOVIN
Sequence: MQTPQYLQQRRKFAAAFLAFIFILAAVDTAEAGKKEKPEKKVKKSDCGEWQWSVCVPTSGDCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGECDLNTALKTRTGSLKRALHNADCQKTVTISKPCGKLTKSKPQAESKKKKKEGKKQEKMLD
What is the function of this protein?
Secreted growth factor that mediates its signal through cell-surface proteoglycan and non-proteoglycan receptors.  Binds cell-surface proteoglycan receptor via their chondroitin sulfate (CS) groups.  Thereby regulates many processes like cell proliferation, cell survival, cell growth, cell differentiation and cell migration in several tissues namely neuron and bone (PubMed:1550956) (By similarity).  Also plays a role in synaptic plasticity and learning-related behavior by inhibiting long-term synaptic potentiation (By similarity).  Binds PTPRZ1, leading to neutralization of the negative charges of the CS chains of PTPRZ1, inducing PTPRZ1 clustering, thereby causing the dimerization and inactivation of its phosphatase activity leading to increased tyrosine phosphorylation of each of the PTPRZ1 substrates like ALK, CTNNB1 or AFAP1L2 in order to activate the PI3K-AKT pathway.  Through PTPRZ1 binding controls oligodendrocyte precursor cell differentiation by enhancing the phosphorylation of AFAP1L2 in order to activate the PI3K-AKT pathway.  Forms a complex with PTPRZ1 and integrin alpha-V/beta-3 (ITGAV:ITGB3) that stimulates endothelial cell migration through SRC dephosphorylation and activation that consequently leads to ITGB3 'Tyr-773' phosphorylation (By similarity).  In adult hippocampus promotes dendritic arborization, spine development, and functional integration and connectivity of newborn granule neurons through ALK by activating AKT signaling pathway (By similarity).  Binds GPC2 and chondroitin sulfate proteoglycans (CSPGs) at the neuron surface, leading to abrogation of binding between PTPRS and CSPGs and neurite outgrowth promotion.  Binds SDC3 and mediates bone formation by recruiting and attaching osteoblasts/osteoblast precursors to the sites for new bone deposition (By similarity).  Binds ALK and promotes cell survival and cell proliferation through MAPK pathway activation (By similarity).  Inhibits proliferation and enhances differentiation of neural stem cells by inhibiting FGF2-induced fibroblast growth factor receptor signaling pathway.  Mediates regulatory mechanisms in normal hemostasis and in hematopoietic regeneration and in maintaining the balance of myeloid and lymphoid regeneration.  In addition may play a role in the female reproductive system, auditory response and the progesterone-induced decidualization pathway (By similarity).
What are the official names of this protein?
Pleiotrophin, PTN, Heparin-binding brain mitogen, HBBM, Heparin-binding growth factor 8, HBGF-8, Heparin-binding growth-associated molecule, HB-GAM, Heparin-binding neurite-promoting factor, p18.
What is the protein family that this protein belongs to?
Belongs to the pleiotrophin family.
What are the subcellular locations of this protein?
Secreted.
Protein: RPO11_METAR
Sequence: MEIKILNKTDTEIQVEIKGESHTMMNALKSCLLEDKAVKVATYDIEFPGISDPVLYVRTDKSEDPIDAIKVAAKKLADECDDFLKIFGKKAKA
What is the function of this protein?
DNA-dependent RNA polymerase (RNAP) catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
What are the official names of this protein?
DNA-directed RNA polymerase subunit Rpo11, DNA-directed RNA polymerase subunit L.
What is the protein family that this protein belongs to?
Belongs to the archaeal Rpo11/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: TAM_YERPP
Sequence: MQDWDPDLYRQFEAERTRPATDLLAHITITSPQFISDLGCGPGNSTELLHRRFPDAQLVGIDHSQAMLASAQQRLPHCTFIEADIHQWRPSQPQNLIYANASLQWLTDHPHLFPSLLSQLAPRGVLAVQMPDNLDQPSHRAMREVAENGPWQQTLQEAGATRAKVLSANHYYDLLAPHAERVDIWRTTYYHPMPSAQAIVDWLRATGLRPYLAPLTEAMQLAFLQNYLAIIDKAYPARTDGRRLLAFPRLFIVAHAQR
What is the function of this protein?
Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
What are the official names of this protein?
Trans-aconitate 2-methyltransferase.
What is the protein family that this protein belongs to?
Belongs to the methyltransferase superfamily. Tam family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: DEOB_STAA2
Sequence: MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQTLPNLEKLGLGNIDKLPVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPEELIQQIEEMTGRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKVRELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGKTVLDHLKDGGYDVIAIGKINDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLNLVDFDALYGHRRDKPGYAQAIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHTREYIPVIMYSPKFKGGHALESDTTFSSIGATIADNFNVTLPEFGKSYLKELK
What is the function of this protein?
Phosphotransfer between the C1 and C5 carbon atoms of pentose.
What are the official names of this protein?
Phosphopentomutase, Phosphodeoxyribomutase.
What is the protein family that this protein belongs to?
Belongs to the phosphopentomutase family.
What are the subcellular locations of this protein?
Cytoplasm.
Protein: URH2_ARATH
Sequence: MAIGDRKKIIIDTDPGIDDAMAIFVALNSPEVDVIGLTTIFGNVYTTLATRNALHLLEVAGRTDIPVAEGTHKTFLNDTKLRIADFVHGKDGLGNQNFPPPKGKPIEKSGPEFLVEQAKLCPGEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANIFGDPEAADIVFTCGADIIAVGINVTHQVIMTADDKDKLASSKGKLAQYLCKILDVYYDYHLTAYEIKGVYLHDPATILAAFLPSLFTYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVKVAVTVDAPAVVKLIMDRLMES
What is the function of this protein?
Involved in pyrimidine breakdown, especially in response to dark stress (PubMed:21599668, PubMed:30787180).  In the presence of URH1, exhibits efficient inosine and xanthosine hydrolytic activities (PubMed:21599668, PubMed:30787180).  Support inosine breakdown especially during the late phase of senescence (PubMed:21235647).
What are the official names of this protein?
Probable uridine nucleosidase 2, Inosine nucleosidase, Nucleoside hydrolase 2, Uridine ribohydrolase 2, Xanthosine nucleosidase.
What is the protein family that this protein belongs to?
Belongs to the IUNH family.
What are the subcellular locations of this protein?
Cytoplasm, cytosol.
Protein: RS17_PARPJ
Sequence: MNDSVKTSLKRTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDDANTYNEGDLVEIQETRPISKTKAWVVARLVEAARVI
What is the function of this protein?
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
What are the official names of this protein?
30S ribosomal protein S17.
What is the protein family that this protein belongs to?
Belongs to the universal ribosomal protein uS17 family.
Protein: DNLJ_RICCK
Sequence: MQNIYLISEKEAKKLLKELADKIERYNHAYYIENNHLVSDAEYDQLFNTNLKLEQKFPHLILENSPSKKVGAKIANKFAKVTHQAPMLSLSNVFDEQDVKDFVDRIKNFLRLNEFAPIFCEPKIDGLSFSAIYKNGLLTIGATRGDGYIGEDMTANIKTIKNFPHKINNAPEFLEVRGEIYIEKQDFFNLNKEQEEQGRDKFANPRNAAAGSLRQLDSSVTAKRPLKYFVYSGGATEQNIASSQNELLKKLKEFGFRVNEISKLADSEEEIFAFYEYLKTNRENLSYEIDGVVYKLNDFALQNRMGFIARAPRFATAHKFPAIVGQTKLLSITVQVGRTGTLTPVAELEPIEIGGVTVSRATLHNFQEIIRKDVRIRDYVFLQRAGDVIPQIIGVDIGKRSTDATTFNTPLFCPSCNSKLHYIPEDIIIRCDNVLNCPAQNYERIRHFVSKNAMDIEGLGRKQVEFLIDKGLISNPLDIFLLKEKNEASLTKLENMDGWGRKSVENLFKNIEESRNVSLPRFIYALGIRHIGEQNAKLLAREFESYNNFISQIELLSKNDSNIYQKLNNLEGIGDKILVDIINFFDVKENIELIKKLGEVLNIEDYKETKEHSSLTGKIVVFTGSLPTTSRVEAKAMAEKLGAKVAVSVSSNTDLVIAGVDAGSKLKKAKELGIKIIDEEEWLTIVNNV
What is the function of this protein?
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction.  It is essential for DNA replication and repair of damaged DNA.
What are the official names of this protein?
DNA ligase, Polydeoxyribonucleotide synthase [NAD(+)].
What is the protein family that this protein belongs to?
Belongs to the NAD-dependent DNA ligase family. LigA subfamily.