Genes on 19q13.43
There are some 160 genes on 19q13.43. Many do not contain or transcribe immunoglobulins.

# Human genes
Gene ID: 1 see Complex locus A1BG and ZNF497.
Gene ID: 2282 is FKBP1AP1 FKBP prolyl isomerase 1A pseudogene 1.
- NR_024162.1 RNA Sequence, ncRNA.
Gene ID: 5178 is PEG3 paternally expressed 3: "In human, ZIM2 and PEG3 are treated as two distinct genes though they share multiple 5' exons and a common promoter and both genes are paternally expressed (PMID:15203203). Alternative splicing events connect their shared 5' exons either with the remaining 4 exons unique to ZIM2, or with the remaining 2 exons unique to PEG3. In contrast, in other mammals ZIM2 does not undergo imprinting and, in mouse, cow, and likely other mammals as well, the ZIM2 and PEG3 genes do not share exons. Human PEG3 protein belongs to the Kruppel C2H2-type zinc finger protein family. PEG3 may play a role in cell proliferation and p53-mediated apoptosis. PEG3 has also shown tumor suppressor activity and tumorigenesis in glioma and ovarian cells. Alternative splicing of this PEG3 gene results in multiple transcript variants encoding distinct isoforms."
- NP_006201.1 paternally-expressed gene 3 protein isoform 1: "Transcript Variant: This variant (1) encodes isoform 1. Variants 1 and 2 both encode the same isoform (1)." Conserved Domains (5) summary: PHA00666 Location: 1421  1501 PHA00666; putative protease, sd00017 Location: 507  527 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 969  991 zf-C2H2; Zinc finger, C2H2 type, pfam02023 Location: 42  124 SCAN; SCAN domain and pfam08648 Location: 141  237 DUF1777; Protein of unknown function (DUF1777).
Gene ID: 6193 is RPS5 ribosomal protein S5: "Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S7P family of ribosomal proteins. It is located in the cytoplasm. Variable expression of this gene in colorectal cancers compared to adjacent normal tissues has been observed, although no correlation between the level of expression and the severity of the disease has been found. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome."
- NP_001000.2 40S ribosomal protein S5, Conserved Domains (1) summary: cd14867 Location: 18  204 uS7_Eukaryote; Eukaryota homolog of Ribosomal Protein S7.
Gene ID: 6795 is AURKC aurora kinase C: "This gene encodes a member of the Aurora subfamily of serine/threonine protein kinases. The encoded protein is a chromosomal passenger protein that forms complexes with Aurora-B and inner centromere proteins and may play a role in organizing microtubules in relation to centrosome/spindle function during mitosis. This gene is overexpressed in several cancer cell lines, suggesting an involvement in oncogenic signal transduction. Alternative splicing results in multiple transcript variants."
- NP_001015878.1 aurora kinase C isoform 1: "Transcript Variant: This variant (1) encodes the longest isoform (1)." Conserved Domains (2) summary: smart00220 Location: 43  293 S_TKc; Serine/Threonine protein kinases, catalytic domain and cd14117 Location: 36  305 STKc_Aurora-B_like; Catalytic domain of the Serine/Threonine kinase, Aurora-B kinase and similar proteins.
- NP_001015879.1 aurora kinase C isoform 2: "Transcript Variant: This variant (2), also known as Aurora C-SV, uses an alternate splice site at the 5' end of the first intron and an alternate upstream translation initiation site, compared to variant 1. The encoded protein (isoform 2) contains a shorter and distinct N-terminus, compared to isoform 1."
- NP_003151.2 aurora kinase C isoform 3: "Transcript Variant: This variant (3) uses an alternate splice site at the 5' end of the first intron and an alternate downstream translation initiation site, compared to variant 1. The encoded protein (isoform 3) has a shorter N-terminus, compared to isoform 1."
Gene ID: 7554 is ZNF8 zinc finger protein 8.
- NP_066575.2  zinc finger protein 8, Conserved Domains (4) summary: smart00349 Location: 25  85 KRAB; krueppel associated box, COG5048 Location: 167  404 COG5048; FOG: Zn-finger , sd00017 Location: 259  279 ZF_C2H2; C2H2 Zn finger  and pfam00096 Location: 467  489 zf-C2H2; Zinc finger, C2H2 type.
Gene ID: 7565 is ZNF17 zinc finger protein 17.
- NP_001317546.1 zinc finger protein 17 isoform 1, Conserved Domains (4) summary: COG5048 Location: 246  658 COG5048; FOG: Zn-finger , sd00017 Location: 222  242 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 12  49 KRAB; KRAB box and pfam13465 Location: 487  511 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 7593 is MZF1 myeloid zinc finger 1.
- NP_001253962.1 myeloid zinc finger 1 isoform 2: "Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1." Conserved Domains (2) summary: smart00431 Location: 40  152 SCAN; leucine rich region and pfam02023 Location: 40  128 SCAN; SCAN domain.
Gene ID: 7691 is ZNF132 zinc finger protein 132.
- NP_003424.3 zinc finger protein 132, Conserved Domains (3) summary: COG5048 Location: 105  528 COG5048; FOG: Zn-finger , sd00017 Location: 433  453 ZF_C2H2; C2H2 Zn finger  and pfam01352 Location: 37  78 KRAB; KRAB box.
Gene ID: 7693 is ZNF134 zinc finger protein 134.
- NP_003426.3 zinc finger protein 134, Conserved Domains (2) summary: COG5048 Location: 202  358 COG5048; FOG: Zn-finger  and sd00017 Location: 178  198 ZF_C2H2; C2H2 Zn finger .
Gene ID: 7694 is ZNF135 zinc finger protein 135.
- NP_001157999.1  zinc finger protein 135 isoform 3: "Transcript Variant: This variant (3) differs in the 3' UTR and 3' coding region, compared to variant 1. It encodes isoform 3 which has a shorter and distinct C-terminus compared to isoform 1." Conserved Domains (2) summary: smart00349 Location: 26  85 KRAB; krueppel associated box and pfam01352 Location: 26  65 KRAB; KRAB box.
Gene ID: 7710 is ZNF154 zinc finger protein 154: "This gene encodes a protein that belongs to the zinc finger Kruppel family of transcriptional regulators, whose members are thought to function in normal and abnormal cell growth and differentiation. Hypermethylation of this gene is associated with the recurrence of non muscle invasive bladder cancer. Alternative splicing results in multiple transcript variants."
- NP_001078853.1 zinc finger protein 154: "Transcript Variant: This variant (1) represents the longest transcript and encodes the functional protein." Conserved Domains (5) summary: smart00349 Location: 14  62 KRAB; krueppel associated box, COG5048 Location: 139  436 COG5048; FOG: Zn-finger , sd00017 Location: 359  379 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 371  396 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 9040 is UBE2M ubiquitin conjugating enzyme E2 M: "The modification of proteins with ubiquitin is an important cellular mechanism for targeting abnormal or short-lived proteins for degradation. Ubiquitination involves at least three classes of enzymes: ubiquitin-activating enzymes, or E1s, ubiquitin-conjugating enzymes, or E2s, and ubiquitin-protein ligases, or E3s. This gene encodes a member of the E2 ubiquitin-conjugating enzyme family. The encoded protein is linked with a ubiquitin-like protein, NEDD8, which can be conjugated to cellular proteins, such as Cdc53/culin."
- NP_003960.1 NEDD8-conjugating enzyme Ubc12, Conserved Domains (1) summary: pfam00179 Location: 33  168 UQ_con; Ubiquitin-conjugating enzyme.
Gene ID: 9422 is ZNF264 zinc finger protein 264: "This gene encodes a zinc finger protein and belongs to the krueppel C2H2-type zinc-finger protein family. Zinc finger proteins are often localized in the nucleus, bind nucleic acids, and regulate transcription."
- NP_003408.1 zinc finger protein 264, Conserved Domains (6) summary: smart00349 Location: 14  74 KRAB; krueppel associated box, COG5048 Location: 184  568 COG5048; FOG: Zn-finger , sd00017 Location: 485  505 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 399  421 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 413  438 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 10155 is TRIM28 tripartite motif containing 28: "The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nucleus and is thought to associate with specific chromatin regions. The protein is a member of the tripartite motif family. This tripartite motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region."
- NP_005753.1 transcription intermediary factor 1-beta, Conserved Domains (7) summary: cd05502 Location: 696  802 Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or corepressors to modulate transcription. Vertebrate Tif1-gamma, also labeled E3 ubiquitin-protein ligase TRIM33, plays a role in the control of hematopoiesis. Its homologue in Xenopus laevis, Ectodermin, has been shown to function in germ-layer specification and control of cell growth during embryogenesis. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine, smart00502 Location: 252  378 BBC; B-Box C-terminal domain, smart00336 Location: 148  184 BBOX; B-Box-type zinc finger, cd00021 Location: 207  245 BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction, cd15623 Location: 627  669 PHD_TIF1beta; PHD finger found in transcription intermediary factor 1-beta (TIF1-beta), cd16765 Location: 62  124 RING-HC_TIF1beta; RING finger, HC subclass, found in transcription inknown asiary factor 1-beta (TIF1-beta) and cl25756 Location: 525  620 BASP1; Brain acid soluble protein 1 (BASP1 protein).
Gene ID: 10172 is ZNF256 zinc finger protein 256.
- NP_001362332.1 zinc finger protein 256 isoform 2 variant 2.
- NP_005764.2 zinc finger protein 256 isoform 1 variant 1, Conserved Domains (5) summary: smart00349 Location: 14  54 KRAB; krueppel associated box, COG5048 Location: 237  612 COG5048; FOG: Zn-finger , sd00017 Location: 521  541 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 309  334 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 10520 is ZNF211 zinc finger protein 211: "This gene encodes a protein containing a Kruppel-associated box domain and multiple zinc finger domains. This protein may play a role in developmental processes. Alternative splicing results in multiple transcript variants."
- NP_001252526.1 zinc finger protein 211 isoform 3: "Transcript Variant: This variant (3) contains an alternate exon in the coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (3) is longer than isoform 1." Conserved Domains (6) summary: smart00349 Location: 46  106 KRAB; krueppel associated box, COG5048 Location: 244  615 COG5048; FOG: Zn-finger , sd00017 Location: 520  540 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 518  540 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 46  85 KRAB; KRAB box and pfam13465 Location: 420  445 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 10597 is TRAPPC2B trafficking protein particle complex 2B.
- NP_001342133.1  trafficking protein particle complex subunit 2B, Conserved Domains (1) summary: cd14825 Location: 4  138 TRAPPC2_sedlin; Trafficking protein particle complex subunit 2.
Gene ID: 10782 is ZNF274 zinc finger protein 274: "This gene encodes a zinc finger protein containing five C2H2-type zinc finger domains, one or two Kruppel-associated box A (KRAB A) domains, and a leucine-rich domain. The encoded protein has been suggested to be a transcriptional repressor. It localizes predominantly to the nucleolus. Alternatively spliced transcript variants encoding different isoforms exist. These variants utilize alternative polyadenylation signals."
- NP_001265663.1  neurotrophin receptor-interacting factor homolog isoform d: "Transcript Variant: This variant (ZNF274d) has an additional segment in the 5' region, which results in a downstream translation start codon, compared to variant ZNF274c. The resulting isoform (d) has a shorter N-terminus and contains only one KRAB A domain, compared to isoform c." Conserved Domains (8) summary: smart00431 Location: 115  227 SCAN; leucine rich region, smart00349 Location: 245  285 KRAB; krueppel associated box, COG5048 Location: 347  599 COG5048; FOG: Zn-finger , sd00017 Location: 523  543 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 549  571 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 245  284 KRAB; KRAB box, pfam02023 Location: 115  203 SCAN; SCAN domain and pfam13465 Location: 563  588 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 10794 is ZNF460 zinc finger protein 460: "Zinc finger proteins, such as ZNF272, interact with nucleic acids and have diverse functions. The zinc finger domain is a conserved amino acid sequence motif containing 2 specifically positioned cysteines and 2 histidines that are involved in coordinating zinc. Kruppel-related proteins form 1 family of zinc finger proteins. See ZFP93 (MIM 604749) for additional information on zinc finger proteins."
- NP_006626.3  zinc finger protein 460 isoform 1, Conserved Domains (3) summary: COG5048 Location: 222  552 COG5048; FOG: Zn-finger , sd00017 Location: 198  218 ZF_C2H2; C2H2 Zn finger  and pfam01352 Location: 12  53 KRAB; KRAB box.
Gene ID: 10998 is SLC27A5 solute carrier family 27 member 5: "The protein encoded by this gene is an isozyme of very long-chain acyl-CoA synthetase (VLCS). It is capable of activating very long-chain fatty-acids containing 24- and 26-carbons. It is expressed in liver and associated with endoplasmic reticulum but not with peroxisomes. Its primary role is in fatty acid elongation or complex lipid synthesis rather than in degradation. This gene has a mouse ortholog."
- NP_001308125.1 bile acyl-CoA synthetase isoform 2 precursor variant 2, Conserved Domains (1) summary: cl17068 Location: 146  596 AFD_class_I; Adenylate forming domain, Class I superfamily.
- NP_036386.1 bile acyl-CoA synthetase isoform 1 precursor variant 1, Conserved Domains (2) summary: cd05938 Location: 140  680 hsFATP2a_ACSVL_like; Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins and PRK08279 Location: 87  690 PRK08279; long-chain-acyl-CoA synthetase; Validated.
- XP_011524666.1  bile acyl-CoA synthetase isoform X1, Conserved Domains (2) summary: pfam00501 Location: 120  558 AMP-binding; AMP-binding enzyme and cl17068 Location: 140  592 AFD_class_I; Adenylate forming domain, Class I superfamily.
Gene ID: 23619 is ZIM2 zinc finger imprinted 2: "In human, ZIM2 and PEG3 (GeneID:5178) are two distinct genes that share a set of 5' exons and have a common promoter, and both genes are paternally expressed. Alternative splicing events connect the shared exons either with the remaining 4 exons unique to ZIM2, or with the remaining 2 exons unique to PEG3. This is in contrast to mouse and cow, where ZIM2 and PEG3 genes do not share exons in common, and the imprinting status of ZIM2 is also not conserved amongst mammals. Additional 5' alternatively spliced transcripts encoding the same protein have been found for the human ZIM2 gene."
- NP_001139798.1  zinc finger imprinted 2 isoform b: "Transcript Variant: This variant (2) contains an additional 5' non-coding exon, therefore, differs in the 5' UTR compared to variant 1. Variants 1-6 all encode the same isoform (b)." Conserved Domains (4) summary: smart00349 Location: 176  232 KRAB; krueppel associated box, sd00017 Location: 414  434 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 466  488 zf-C2H2; Zinc finger, C2H2 type and pfam13465 Location: 342  365 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 25799 is ZNF324 zinc finger protein 324.
- NP_055162.1 zinc finger protein 324A, Conserved Domains (6) summary: smart00349 Location: 1  61 KRAB; krueppel associated box, COG5048 Location: 263  463 COG5048; FOG: Zn-finger , sd00017 Location: 259  279 ZF_C2H2; C2H2 Zn finger , pfam00096 Location:369  391 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 1  40 KRAB; KRAB box and pfam13465 Location: 271  296 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 27243 is CHMP2A charged multivesicular body protein 2A: "CHMP2A belongs to the chromatin-modifying protein/charged multivesicular body protein (CHMP) family. These proteins are components of ESCRT-III (endosomal sorting complex required for transport III), a complex involved in degradation of surface receptor proteins and formation of endocytic multivesicular bodies (MVBs). Some CHMPs have both nuclear and cytoplasmic/vesicular distributions, and one such CHMP, CHMP1A (MIM 164010), is required for both MVB formation and regulation of cell cycle progression (Tsang et al., 2006 )."
- NP_055268.1  charged multivesicular body protein 2a: "Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein." Conserved Domains (1) summary: pfam03357 Location: 17  185 Snf7; Snf7.
Gene ID: 27300 is ZNF544 zinc finger protein 544.
- NP_001307696.1 zinc finger protein 544 isoform 1: "Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 - 3 encode the same protein (isoform 1)." Conserved Domains (4) summary: smart00349 Location: 14  73 KRAB; krueppel associated box, COG5048 Location: 406  699 COG5048; FOG: Zn-finger , sd00017 Location: 494  514 ZF_C2H2; C2H2 Zn finger  and pfam13465 Location: 370  391 zf-H2C2_2; Zinc-finger double domain.
- NP_001307698.1 zinc finger protein 544 isoform 1: "Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1 - 3 encode the same protein (isoform 1)."
- NP_001307699.1 zinc finger protein 544 isoform 2: "Transcript Variant: This variant (4) differs in the 5' UTR and lacks an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. Variants 4 - 6 encode the same protein (isoform 2)."
- NP_001307700.1 zinc finger protein 544 isoform 2: "Transcript Variant: This variant (5) lacks an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. Variants 4 - 6 encode the same protein (isoform 2)."
- NP_001307702.1 zinc finger protein 544 isoform 2: "Transcript Variant: This variant (6) differs in the 5' UTR and lacks an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. Variants 4 - 6 encode the same protein (isoform 2)."
- NP_001307703.1 zinc finger protein 544 isoform 3: "Transcript Variant: This variant (7) differs in the 5' UTR and uses an alternate in-frame splice site in the 3' terminal exon, compared to variant 1. It encodes isoform 3, which is shorter than isoform 1."
- NP_001307705.1 zinc finger protein 544 isoform 4: "Transcript Variant: This variant (8) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 4) is shorter and has distinct N- and C-termini, compared to isoform 1."
- NP_001307706.1 zinc finger protein 544 isoform 5: "Transcript Variant: This variant (9) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 5) is shorter and has distinct N- and C-termini, compared to isoform 1."
- NP_001307709.1 zinc finger protein 544 isoform 6: "Transcript Variant: This variant (10) contains an alternate 3' terminal exon, compared to variant 1. It encodes a shorter isoform (6) which has a distinct C-terminus, compared to isoform 1."
- NP_001307710.1 zinc finger protein 544 isoform 7: "Transcript Variant: This variant (11) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 7) is shorter and has distinct N- and C-termini, compared to isoform 1."
- NP_001307711.1 zinc finger protein 544 isoform 8: "Transcript Variant: This variant (12) contains an alternate 3' terminal exon, compared to variant 1. It encodes a shorter isoform (8) which has a distinct C-terminus, compared to isoform 1."
- NP_001307712.1 zinc finger protein 544 isoform 9: "Transcript Variant: This variant (13) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 9) is shorter and has distinct N- and C-termini, compared to isoform 1."
- NP_001307714.1 zinc finger protein 544 isoform 10: "Transcript Variant: This variant (14) uses alternate splice sites in the penultimate and 3' terminal exons, compared to variant 1. It encodes isoform 10 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 14 - 16 encode the same protein (isoform 10)."
- NP_001307715.1 zinc finger protein 544 isoform 10: "Transcript Variant: This variant (15) differs in the 5' UTR and uses alternate splice sites in the penultimate and 3' terminal exons, compared to variant 1. It encodes isoform 10 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 14 - 16 encode the same protein (isoform 10)."
- NP_001307716.1 zinc finger protein 544 isoform 10: "Transcript Variant: This variant (16) differs in the 5' UTR and uses alternate splice sites in the penultimate and 3' terminal exons, compared to variant 1. It encodes isoform 10 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 14 - 16 encode the same protein (isoform 10)."
- NP_001307717.1 zinc finger protein 544 isoform 11: "Transcript Variant: This variant (17) uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17 - 20 encode the same protein (isoform 11)."
- NP_001307718.1 zinc finger protein 544 isoform 11: "Transcript Variant: This variant (18) differs in the 5' UTR and uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17 - 20 encode the same protein (isoform 11)."
- NP_001307720.1 zinc finger protein 544 isoform 11: "Transcript Variant: This variant (19) differs in the 5' UTR and uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17 - 20 encode the same protein (isoform 11)."
- NP_001307721.1 zinc finger protein 544 isoform 11: "Transcript Variant: This variant (20) differs in the 5' UTR and uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17 - 20 encode the same protein (isoform 11)."
- NP_055295.2 zinc finger protein 544 isoform 1: "Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1 - 3 encode the same protein (isoform 1)."
Gene ID: 54807 is ZNF586 zinc finger protein 586.
- NP_001070894.1 zinc finger protein 586 isoform b: "Transcript Variant: This variant (2) lacks an alternate exon that results in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (b) has a distinct C-terminus and is shorter than isoform a."
- NP_001191743.1 zinc finger protein 586 isoform c: "Transcript Variant: This variant (3) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (c) is shorter at the N-terminus, compared to isoform a."
- NP_060122.2 zinc finger protein 586 isoform a: "Transcript Variant: This variant (1) encodes the longest isoform (a)." Conserved Domains (5) summary: smart00349 Location: 15  56 KRAB; krueppel associated box, COG5048 Location: 104  366 COG5048; FOG: Zn-finger , sd00017 Location: 208  228 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 15  54 KRAB; KRAB box and pfam13465 Location: 276  300 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 55311 is ZNF444 zinc finger protein 444: "This gene encodes a zinc finger protein which activates transcription of a scavenger receptor gene involved in the degradation of acetylated low density lipoprotein (Ac-LDL) (PMID: 11978792). This gene is located in a cluster of zinc finger genes on chromosome 19 at q13.4. A pseudogene of this gene is located on chromosome 15. Multiple transcript variants encoding different isoforms have been found for this gene." Conserved Domains (4) summary: COG5048 Location: 178  279 COG5048; FOG: Zn-finger , sd00017 Location: 180  200 ZF_C2H2; C2H2 Zn finger , pfam02023 Location: 21  98 SCAN; SCAN domain and pfam13465 Location: 192  217 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 55659 is ZNF416 zinc finger protein 416.
- NP_001340334.1 zinc finger protein 416 isoform 2, Conserved Domains (4) summary: COG5048 Location: 253  434 COG5048; FOG: Zn-finger , COG5189 Location: 418  501 SFP1; Putative transcriptional repressor regulating G2/M transition , sd00017 Location: 200  220 ZF_C2H2; C2H2 Zn finger  and pfam13465 Location: 212  237 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 55663 is ZNF446 zinc finger protein 446.
- NP_001291382.1  zinc finger protein 446 isoform 2: "Transcript Variant: This variant (2) has a shorter 5' UTR and differs in the 3' exon structure, compared to variant 1. The encoded isoform (2) has a distinct, shorter C-terminus compared to isoform 1."
- NP_060378.1 zinc finger protein 446 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (5) summary: smart00431 Location: 22  137 SCAN; leucine rich region, sd00017 Location: 334  354 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 209  237 KRAB; KRAB box, pfam02023 Location: 22  110 SCAN; SCAN domain and pfam13465 Location: 410  432 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 57191 is VN1R1 vomeronasal 1 receptor 1: "Pheromones are chemical signals that elicit specific behavioral responses and physiologic alterations in recipients of the same species. The protein encoded by this gene is similar to pheromone receptors and is primarily localized to the olfactory mucosa. An alternate splice variant of this gene is thought to exist, but its full length nature has not been determined."
- NP_065684.1  vomeronasal type-1 receptor 1, Conserved Domains (1) summary: pfam03402 Location: 74  335 V1R; Vomeronasal organ pheromone receptor family, V1R.
Gene ID: 57343 is ZNF304 zinc finger protein 304: "This gene encodes a member of the Krueppel C2H2-type zinc-finger family of proteins. The encoded protein functions as a transcriptional repressor that recruits a corepressor complex to stimulate promoter hypermethylation and transcriptional silencing of target genes. Expression of this gene is upregulated in colorectal, ovarian and breast cancer, and this gene may promote cancer cell survival, growth and invasion."
- NP_001277247.1 zinc finger protein 304 isoform 1: "Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1)." Conserved Domains (5) summary: smart00349 Location: 14  73 KRAB; krueppel associated box, COG5048 Location: 325  680 COG5048; FOG: Zn-finger , sd00017 Location: 384  404 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 396  421 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 57573 is ZNF471 zinc finger protein 471.
- NP_001308697.1 zinc finger protein 471 isoform, 2 variant 2.
- NP_065864.2 zinc finger protein 471 isoform 1, 2 variant 1, Conserved Domains (5) summary: smart00349 Location: 14  73 KRAB; krueppel associated box, COG5048 Location: 203  610 COG5048; FOG: Zn-finger , sd00017 Location: 517  537 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box, pfam13465 Location: 557  581 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 57663 is USP29 ubiquitin specific peptidase 29, Conserved Domains (3) summary: cd02257 Location: 823  883 Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome, pfam00443 Location: 286  550 UCH; Ubiquitin carboxyl-terminal hydrolase and pfam16674 Location: 3  104 UCH_N; N-terminal of ubiquitin carboxyl-terminal hydrolase 37.
Gene ID: 58491 is ZNF71 zinc finger protein 71.
- NP_001357144.1 endothelial zinc finger protein induced by tumor necrosis factor alpha isoform 2, Conserved Domains (3) summary: COG5048 Location: 170  544 COG5048; FOG: Zn-finger , sd00017 Location: 332  352 ZF_C2H2; C2H2 Zn finger  and pfam01352 Location: 13  54 KRAB; KRAB box.
Gene ID: 63934 is ZNF667 zinc finger protein 667.
- NP_001308284.1  zinc finger protein 667 isoform 2, variant 3.
- NP_001308285.1  zinc finger protein 667 isoform 1, variant 2, Conserved Domains (3) summary: smart00349 Location: 15  74 KRAB; krueppel associated box, COG5048 Location: 141  601 COG5048; FOG: Zn-finger  and sd00017 Location: 501  521 ZF_C2H2; C2H2 Zn finger .
- NP_071386.3  zinc finger protein 667 isoform 1: "Transcript Variant: This variant (1) represents the shorter transcript and encodes the functional protein."
Gene ID: 65982 is ZSCAN18 zinc finger and SCAN domain containing 18.
- NP_001139014.1 zinc finger and SCAN domain-containing protein 18 isoform 1: "Transcript Variant: This variant (1) encodes the longest protein (isoform 1)." Conserved Domains (3) summary: smart00349 Location: 284  321 KRAB; krueppel associated box, sd00017 Location: 471  491 ZF_C2H2; C2H2 Zn finger  and pfam02023 Location: 102  189 SCAN; SCAN domain.
- NP_001139015.1 zinc finger and SCAN domain-containing protein 18 isoform 3: "Transcript Variant: This variant (4) uses a different segment for its 5' UTR and lacks a coding region segment, which results in the use of a downstream start codon, compared to variant 1. Variants 3 and 4 encode the same protein (isoform 3), which is shorter when it is compared to isoform 1."
- NP_001139016.1 zinc finger and SCAN domain-containing protein 18 isoform 2: "Transcript Variant: This variant (2) uses a different segment for its 5' UTR and lacks a coding region segment, which results in the use of a downstream start codon, compared to variant 1. The resulting protein (isoform 2) has a shorter N-terminus when it is compared to isoform 1."
- NP_076415.3 zinc finger and SCAN domain-containing protein 18 isoform 3: "Transcript Variant: This variant (3) uses a different segment for its 5' UTR and lacks a coding region segment, which results in the use of a downstream start codon, compared to variant 1. Variants 3 and 4 encode the same protein (isoform 3), which is shorter when it is compared to isoform 1."
Gene ID: 65996 is CENPBD1P1 CENPB DNA-binding domains containing 1 pseudogene 1, non-coding RNA.
Gene ID: 79149 is ZSCAN5A zinc finger and SCAN domain containing 5A.
- NP_001308990.1 zinc finger and SCAN domain-containing protein 5A isoform a: "Transcript Variant: This variant (1) and variant 2 both encode isoform a."
- NP_001308991.1 zinc finger and SCAN domain-containing protein 5A isoform a: "Transcript Variant: This variant (2) and variant 1 both encode isoform a."
- NP_001308993.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (4), along with variants 3, 5-8, and 10-11, encodes isoform b." Conserved Domains (5) summary: cd07936 Location: 40  124 SCAN; SCAN oligomerization domain, COG5048 Location: 339  492 COG5048; FOG: Zn-finger , sd00017 Location: 414  434 ZF_C2H2; C2H2 Zn finger  pfam03546 Location: 213  355 Treacle; Treacher Collins syndrome protein Treacle and pfam13465 Location: 454  479 zf-H2C2_2; Zinc-finger double domain.
- NP_001308994.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (5), along with variants 3-4, 6-8, and 10-11, encodes isoform b."
- NP_001308995.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (6), along with variants 3-5, 7-8, and 10-11, encodes isoform b."
- NP_001308996.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (7), along with variants 3-6, 8, and 10-11, encodes isoform b."
- NP_001308997.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (8), along with variants 3-7 and 10-11, encodes isoform b."
- NP_001308999.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (10), along with variants 3-8 and 11, encodes isoform b."
- NP_001309001.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (11), along with variants 3-8 and 10, encodes isoform b."
- NP_001309002.1 zinc finger and SCAN domain-containing protein 5A isoform c: "Transcript Variant: This variant (12), along with variants 13-15, encodes isoform c."
- NP_001309003.1 zinc finger and SCAN domain-containing protein 5A isoform c: "Transcript Variant: This variant (13), along with variants 12 and 14-15, encodes isoform c."
- NP_001309004.1 zinc finger and SCAN domain-containing protein 5A isoform c: "Transcript Variant: This variant (14), along with variants 12-13 and 15, encodes isoform c."
- NP_001309005.1 zinc finger and SCAN domain-containing protein 5A isoform c: "Transcript Variant: This variant (15), along with variants 12-14, encodes isoform c."
- NP_001309006.1 zinc finger and SCAN domain-containing protein 5A isoform d.
- NP_001309007.1 zinc finger and SCAN domain-containing protein 5A isoform e.
- NP_077279.1 zinc finger and SCAN domain-containing protein 5A isoform b: "Transcript Variant: This variant (3), along with variants 4-8 and 10-11, encodes isoform b."
Gene ID: 79336 is OR5AH1P olfactory receptor family 5 subfamily AH member 1 pseudogene: "Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms."
Gene ID: 79673 is ZNF329 zinc finger protein 329.
- NP_078896.3 zinc finger protein 329, Conserved Domains (5) summary: COG5048 Location: 177  539 COG5048; FOG: Zn-finger , sd00017 Location: 233  253 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 203  225 zf-C2H2; Zinc finger, C2H2 type, pfam13465 Location: 357  382 zf-H2C2_2; Zinc-finger double domain and cl19237 Location: 457  524 DUF45; Protein of unknown function DUF45.
Gene ID: 79744 is ZNF419 zinc finger protein 419.
- NP_001091961.1 zinc finger protein 419 isoform 1: "Transcript Variant: This variant (1) encodes the longest isoform (1)." Conserved Domains (5) summary: smart00349 Location: 28  88 KRAB; krueppel associated box, COG5048 Location: 262  418 COG5048; FOG: Zn-finger , sd00017 Location: 262  282 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 28  67 KRAB; KRAB box and pfam13465 Location: 330  355 zf-H2C2_2; Zinc-finger double domain.
- NP_001091962.1 zinc finger protein 419 isoform 3: "Transcript Variant: This variant (3) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1, resulting in an isoform (3) that is shorter than isoform 1."
- NP_001091963.1 zinc finger protein 419 isoform 4: "Transcript Variant: This variant (4) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (4) that is shorter than isoform 1."
- NP_001091964.1 zinc finger protein 419 isoform 5: "Transcript Variant: This variant (5) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1, resulting in an isoform (5) that is shorter than isoform 1."
- NP_001091965.1 zinc finger protein 419 isoform 6: "Transcript Variant: This variant (6) lacks two alternate in-frame exons in the 5' coding region, compared to variant 1, resulting in an isoform (6) that is shorter than isoform 1."
- NP_001091966.1 zinc finger protein 419 isoform 7: "Transcript Variant: This variant (7) lacks two alternate in-frame exons and and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (7) that is shorter than isoform 1."
- NP_001278672.1 zinc finger protein 419 isoform 8: "Transcript Variant: This variant (8) uses an alternate in-frame splice site and lacks an alternate in-frame exon in the 5' coding region, compared to variant 1, resulting in an isoform (8) that is shorter than isoform 1."
- NP_001278673.1 zinc finger protein 419 isoform 9 precursor: "Transcript Variant: This variant (9) uses an alternate splice site and it thus differs in its 5' UTR and initiates translation at a downstream in-frame start codon, and it also lacks an in-frame exon in the 5' coding region, compared to variant 1. The encoded isoform (9) is shorter at the N-terminus, compared to isoform 1."
- NP_001278674.1 zinc finger protein 419 isoform 10: "Transcript Variant: This variant (10) lacks an alternate in-frame exon in the 5' coding region, and it uses an alternate splice site in its 3' terminal exon and thus differs in the 3' coding region, compared to variant 1. The encoded isoform (10) has a distinct C-terminus and is shorter than isoform 1."
- NP_078967.3 zinc finger protein 419 isoform 2: "Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (2) that is shorter than isoform 1."
Gene ID: 79818 is ZNF552 zinc finger protein 552.
- NP_079038.2 zinc finger protein 552, Conserved Domains (5) summary: smart00349 Location: 14  55 KRAB; krueppel associated box, COG5048 Location: 243  407 COG5048; FOG: Zn-finger , sd00017 Location: 298  318 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 339  362 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 79891 is ZNF671 zinc finger protein 671.
- NP_001308304.1 zinc finger protein 671 isoform 2. Conserved Domains (5) summary: smart00349 Location: 1  32 KRAB; krueppel associated box, COG5048 Location: 208  366 COG5048; FOG: Zn-finger , sd00017 Location: 294  314 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 292  314 zf-C2H2; Zinc finger, C2H2 type and pfam13465 Location: 223  247 zf-H2C2_2; Zinc-finger double domain.
- NP_001308305.1 zinc finger protein 671 isoform 3.
- NP_079109.2 zinc finger protein 671 isoform 1.
Gene ID: 80095 is ZNF606 zinc finger protein 606: "This gene encodes a zinc finger protein containing a Kruppel-associated box (KRAB) domain at its N-terminus, followed by contiguous C2H2 zinc finger motifs. The encoded protein is a nuclear protein that can act as a transcriptional repressor of growth factor-mediated signaling pathways in a reporter gene assay. This protein has been shown to interact with the SRY-box 9 gene product, and suppresses its transcriptional activity by inhibiting its DNA binding activity. Reduced expression of this gene promotes chondrocyte differentiation. Alternative splicing results in multiple transcript variants encoding different isoforms."
- NP_001334951.1 zinc finger protein 606 isoform 1: "Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same isoform (1)." Conserved Domains (3) summary: smart00349 Location: 62  122 KRAB; krueppel associated box, COG5048 Location: 383  774 COG5048; FOG: Zn-finger  and sd00017 Location: 458  478 ZF_C2H2; C2H2 Zn finger .
Gene ID: 84878 is ZBTB45 zinc finger and BTB domain containing 45.
- NP_001303907.1 zinc finger and BTB domain-containing protein 45: "Transcript Variant: This variant (1) represents the longest transcript. All six variants encode the same protein." Conserved Domains (6) summary: smart00225 Location: 34  124 BTB; Broad-Complex, Tramtrack and Bric a brac, COG5048 Location: 405  472 COG5048; FOG: Zn-finger , sd00017 Location: 405  425 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 459  481 zf-C2H2; Zinc finger, C2H2 type, pfam00651 Location: 23  122 BTB; BTB/POZ domain and pfam13465 Location: 445  470 zf-H2C2_2; Zinc-finger double domain.
- NP_001303908.1 zinc finger and BTB domain-containing protein 45: "Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. All six variants encode the same protein."
- NP_001303909.1 zinc finger and BTB domain-containing protein 45: "Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. All six variants encode the same protein."
- NP_001303910.1 zinc finger and BTB domain-containing protein 45: "Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. All six variants encode the same protein."
- NP_001303911.1 zinc finger and BTB domain-containing protein 45: "Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. All six variants encode the same protein."
- NP_116181.1 zinc finger and BTB domain-containing protein 45: "Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. All six variants encode the same protein."
Gene ID: 84914 is ZNF587 zinc finger protein 587.
- NP_001191746.1  zinc finger protein 587 isoform 2: "Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (2) that is 1 aa shorter than isoform 1." Conserved Domains (5) summary: smart00349 Location: 14  69 KRAB; krueppel associated box, COG5048 Location: 272  567 COG5048; FOG: Zn-finger , sd00017 Location: 353  373 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 533  556 zf-H2C2_2; Zinc-finger double domain.
- NP_116217.1 zinc finger protein 587 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)."
Gene ID: 85569 is GALP galanin like peptide: "This gene encodes a member of the galanin family of neuropeptides. The encoded protein binds galanin receptors 1, 2 and 3 with the highest affinity for galanin receptor 3 and has been implicated in biological processes involving the central nervous system including hypothalamic regulation of metabolism and reproduction. A peptide encoded by a splice variant of this gene, termed alarin, has vasoactive properties, displays antimicrobial activity against E. coli, and may serve as a marker for neuroblastic tumors."
- NP_149097.1  galanin-like peptide isoform 1 precursor: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (1) summary: pfam01296 Location: 33  45 Galanin; Galanin.
Gene ID: 90233 is ZNF551 zinc finger protein 551.
- NP_001257867.1 zinc finger protein 551 isoform 2: "Transcript Variant: This variant (2) uses an alternate splice site at the 3' end of the first exon compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1." Conserved Domains (5) summary: smart00349 Location: 1  43 KRAB; krueppel associated box, COG5048 Location: 251  596 COG5048; FOG: Zn-finger , sd00017 Location: 561  581 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 1  40 KRAB; KRAB box and pfam13465 Location: 601  626 zf-H2C2_2; Zinc-finger double domain.
- NP_612356.2 zinc finger protein 551 isoform 1: "Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1)."
Gene ID: 90485 is ZNF835 zinc finger protein 835.
- NP_001005850.2 zinc finger protein 835, Conserved Domains (5) summary: COG5048 Location: 136  487 COG5048; FOG: Zn-finger , sd00017 Location: 140  160 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 474  496 zf-C2H2; Zinc finger, C2H2 type, pfam13465 Location: 348  373 zf-H2C2_2; Zinc-finger double domain and cl00955 Location: 178  243 Ribosomal_L34e; Ribosomal protein L34e.
Gene ID: 114026 is ZIM3 zinc finger imprinted 3.
- NP_443114.1 zinc finger imprinted 3, Conserved Domains (5) summary: smart00349 Location: 8  68 KRAB; krueppel associated box, COG5048 Location: 304  465 COG5048; FOG: Zn-finger , sd00017 Location: 281  301 ZF_C2H2; C2H2 Zn finger , pfam13465 Location: 237  261 zf-H2C2_2; Zinc-finger double domain and pfam15909 Location: 172  241 zf-C2H2_8; C2H2-type zinc ribbon.
Gene ID: 114189 is SIGLEC31P sialic acid binding Ig like lectin 31, pseudogene.
Gene ID: 116412 is ZNF837 zinc finger protein 837.
- NP_612475.1 zinc finger protein 837: "Transcript Variant: This variant (2) uses an alternate splice site, compared to variant 1, and is protein-coding." cl26386 Location: 3  265 DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III.
Gene ID: 125919 is ZNF543 zinc finger protein 543.
- NP_998763.2  zinc finger protein 543, Conserved Domains (3) summary: smart00349 Location: 9  69 KRAB; krueppel associated box, COG5048 Location: 223  562 COG5048; FOG: Zn-finger  and sd00017 Location: 397  417 ZF_C2H2; C2H2 Zn finger .
Gene ID: 126204 is NLRP13 NLR family pyrin domain containing 13: "This gene encodes a member of the NACHT, leucine rich repeat, and PYD containing (NLRP) protein family. It has an N-terminal pyrin domain, followed by a NACHT domain, a NACHT-associated domain (NAD), and a C-terminal leucine-rich repeat (LRR) region. NLRP proteins are implicated in the activation of proinflammatory caspases through multiprotein complexes called inflammasomes. Alternative splicing results in multiple transcript variants encoding different isoforms."
- NP_001307986.1 NACHT, LRR and PYD domains-containing protein 13 isoform 2, Conserved Domains (6) summary: smart00382 Location: 229  362 AAA; ATPases associated with a variety of cellular activities, cd00116 Location: 718  977 LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1), cd08320 Location: 17  107 Pyrin_NALPs; Pyrin death domain found in NALP proteins, sd00033 Location: 784  811 LRR_RI; leucine-rich repeat , sd00034 Location: 728  756 LRR_AMN1; leucine-rich repeat  and pfam05729 Location: 230  401 NACHT; NACHT domain.
Gene ID: 126205 is NLRP8 NLR family pyrin domain containing 8: "This gene encodes a member of the nucleotide-binding oligomerization domain/ leucine rich repeat/ pyrin domain containing (NLRP) subfamily, which belongs to the Nod-like receptor family of proteins. NLRP genes play roles in the mammalian innate immune system through inflammasome formation and activation of caspases. In addition, NLRP genes have been found to function during mammalian reproduction. Consistent with a function during human preimplantation development, this gene is expressed at high levels in oocytes with decreased levels in embryos. Alternative splicing results in multiple transcript variants."
- NP_001303929.1 NACHT, LRR and PYD domains-containing protein 8 isoform 2: "Transcript Variant: This variant (2) uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1." Conserved Domains (6) summary: COG4886 Location: 810  974 LRR; Leucine-rich repeat (LRR) protein , cd00116 Location: 775  988 LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1), cd08320 Location: 41  123 Pyrin_NALPs; Pyrin death domain found in NALP proteins, sd00033 Location: 818  846 LRR_RI; leucine-rich repeat , sd00034 Location: 734  760 LRR_AMN1; leucine-rich repeat  and cl21455 Location: 205  372 P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases.
Gene ID: 126206 is NLRP5 NLR family pyrin domain containing 5: "The protein encoded by this gene belongs to the NALP protein family. Members of the NALP protein family typically contain a NACHT domain, a NACHT-associated domain (NAD), a C-terminal leucine-rich repeat (LRR) region, and an N-terminal pyrin domain (PYD). Expression of this gene is restricted to the oocyte. A mouse gene that encodes a maternal oocyte protein, similar to this encoded protein, is required for normal early embryogenesis."
- NP_703148.4  NACHT, LRR and PYD domains-containing protein 5, Conserved Domains (5) summary: cd00116 Location: 897  1159 LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1), cd08320 Location: 65  148 Pyrin_NALPs; Pyrin death domain found in NALP proteins, sd00033 Location: 839  863 LRR_RI; leucine-rich repeat , sd00034 Location: 868  895 LRR_AMN1; leucine-rich repeat  and pfam05729 Location: 280  443 NACHT; NACHT domain.
Gene ID: 126208 is ZNF787 zinc finger protein 787.
- NP_001002836.2  zinc finger protein 787 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (2) summary: COG5048 Location: 67  200 COG5048; FOG: Zn-finger  and sd00017 Location: 68  88 ZF_C2H2; C2H2 Zn finger .
Gene ID: 140612 is ZFP28 ZFP28 zinc finger protein.
- NP_065879.1 zinc finger protein 28 homolog isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (6) summary: smart00349 Location: 103  163 KRAB; krueppel associated box, COG5048 Location: 417  806 COG5048; FOG: Zn-finger , sd00017 Location: 619  639 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 420  442 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 103  142 KRAB; KRAB box and pfam13465 Location: 659  684 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 147670 is SMIM17 small integral membrane protein 17.
Gene ID: 147685 is C19orf18 chromosome 19 open reading frame 18.
- NP_689687.1 uncharacterized protein C19orf18 precursor.
Gene ID: 147686 is ZNF418 zinc finger protein 418.
- NP_001303956.1 zinc finger protein 418 isoform a: "Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a)." Conserved Domains (5) summary: smart00349 Location: 26  67 KRAB; krueppel associated box, COG5048 Location: 304  692 COG5048; FOG: Zn-finger , sd00017 Location: 505  525 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 26  65 KRAB; KRAB box and pfam13465 Location: 433  458 zf-H2C2_2; Zinc-finger double domain.
- NP_001303957.1 zinc finger protein 418 isoform b: "Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) has a shorter and distinct N-terminus compared to isoform a."
- NP_001303958.1 zinc finger protein 418 isoform c: "Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) has a shorter and distinct N-terminus compared to isoform a. Variants 3 and 4 both encode the same isoform (c)."
- NP_001303959.1 zinc finger protein 418 isoform d: "Transcript Variant: This variant (5) lacks three alternate exons compared to variant 1. The resulting isoform (d) is shorter at the N-terminus compared to isoform a."
- NP_597717.1 zinc finger protein 418 isoform c: "Transcript Variant: This variant (3) lacks an alternate 5' exon and uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (c) has a shorter and distinct N-terminus compared to isoform a. Variants 3 and 4 both encode the same isoform (c)."
Gene ID: 147687 is ZNF417 zinc finger protein 417.
- NP_001284663.1 zinc finger protein 417 isoform 2: "Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2, which is shorter by one amino acid, compared to isoform 1." Conserved Domains (5) summary: smart00349 Location: 14  69 KRAB; krueppel associated box, COG5048 Location: 272  567 COG5048; FOG: Zn-finger , sd00017 Location: 353  373 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 393  418 zf-H2C2_2; Zinc-finger double domain.
- NP_689688.2  zinc finger protein 417 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)."
Gene ID: 147694 is ZNF548 zinc finger protein 548.
- NP_001166244.1  zinc finger protein 548 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (5) summary: smart00349 Location: 20  60 KRAB; krueppel associated box, COG5048 Location: 292  507 COG5048; FOG: Zn-finger , sd00017 Location: 295  315 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 20  59 KRAB; KRAB box and pfam13465 Location: 280  304 zf-H2C2_2; Zinc-finger double domain.
- NP_690873.2  zinc finger protein 548 isoform 2: "Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1."
Gene ID: 147945 is NLRP4 NLR family pyrin domain containing 4: "The protein encoded by this gene is a member of the nucleotide-binding and leucine-rich repeat receptor (NLR) family, and is predicted to contain an N-terminal pyrin effector domain (PYD), a centrally-located nucleotide-binding and oligomerization domain (NACHT) and C-terminal leucine-rich repeats (LRR). This gene product has a demonstrated role as a negative regulator of autophagy and type I interferon signaling pathways as a result of protein interactions with its NACHT domain. The PYD domain has also been shown to be important in the inhibition of NF-kB (nuclear factor kappa-light-chain-enhancer of activated B cells)."
- NP_604393.2 NACHT, LRR and PYD domains-containing protein 4, Conserved Domains (7) summary: smart00382 Location: 147  279 AAA; ATPases associated with a variety of cellular activities, cd00116 Location: 724  957 LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1), cd08320 Location: 11  92 Pyrin_NALPs; Pyrin death domain found in NALP proteins, sd00033 Location: 640  668 LRR_RI; leucine-rich repeat , sd00034 Location: 895  922 LRR_AMN1; leucine-rich repeat , pfam05729 Location: 149  318 NACHT; NACHT domain and cl00416 Location: 512  570 CS_ACL-C_CCL; Citrate synthase (CS), citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL) and the C-terminal portion of the large subunit of the two-subunit type ACL. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) from citrate and coenzyme A (CoA), the first step in the oxidative citric acid cycle (TCA or Krebs cycle). Peroxisomal CS is involved in the glyoxylate cycle. Some CS proteins function as a 2-methylcitrate synthase (2MCS). 2MCS catalyzes the condensation of propionyl-CoA (PrCoA) and OAA to form 2-methylcitrate and CoA during propionate metabolism. CCL cleaves citryl-CoA (CiCoA) to AcCoA and OAA. ACLs catalyze an ATP- and a CoA- dependant cleavage of citrate to form AcCoA and OAA; they do this in a multistep reaction, the final step of which is likely to involve the cleavage of CiCoA to generate AcCoA and OAA. The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate CiCoA, and c) the hydrolysis of CiCoA to produce citrate and CoA. This group contains proteins which functions exclusively as either a CS or a 2MCS, as well as those with relaxed specificity which have dual functions as both a CS and a 2MCS. There are two types of CSs: type I CS and type II CSs. Type I CSs are found in eukarya, gram-positive bacteria, archaea, and in some gram-negative bacteria and are homodimers with both subunits participating in the active site. Type II CSs are unique to gram-negative bacteria and are homohexamers of identical subunits (approximated as a trimer of dimers). Some type II CSs are strongly and specifically inhibited by NADH through an allosteric mechanism. In fungi, yeast, plants, and animals ACL is cytosolic and generates AcCoA for lipogenesis. In several groups of autotrophic prokaryotes and archaea, ACL carries out the citrate-cleavage reaction of the reductive tricarboxylic acid (rTCA) cycle. In the family Aquificaceae this latter reaction in the rTCA cycle is carried out via a two enzyme system the second enzyme of which is CCL.
Gene ID: 147947 is ZNF542P zinc finger protein 542, pseudogene.
- NR_003127.2 RNA Sequence, non-coding RNA: "Transcript Variant: This variant (4) has an alternate first exon, includes an additional internal exon in the 5' region, and uses an alternate splice site in an internal exon in the 3' region, compared to variant 1."
- NR_024055.2 RNA Sequence, non-coding RNA: "Transcript Variant: This variant (5) has an alternate first exon, includes an additional internal exon in the 5' region, and lacks an internal exon in the 3' region, compared to variant 1."
- NR_024056.2 RNA Sequence, non-coding RNA: "Transcript Variant: This variant (2) uses an alternate splice site in an internal exon in the 3' region, compared to variant 1."
- NR_024057.2 RNA Sequence, non-coding RNA: "Transcript Variant: This variant (3) lacks an alternate internal exon in the 3' region, compared to variant 1."
- NR_033418.1 RNA Sequence, non-coding RNA: "Transcript Variant: This variant (1) represents the longest transcript."
Gene ID: 147948 is ZNF582 zinc finger protein 582: "The protein encoded by this gene is a zing finger protein and putative transcription factor that is highly methylated in cervical cancers. Two transcript variants encoding different isoforms have been found for this gene."
- NP_001307300.1 zinc finger protein 582 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (5) summary: smart00349 Location: 39  97 KRAB; krueppel associated box, COG5048 Location:211  439 COG5048; FOG: Zn-finger , sd00017 Location: 372  392 ZF_C2H2; C2H2 Zn f inger , pfam01352 Location: 39  76 KRAB; KRAB box and pfam13465 Location: 413  437 zf-H2C2_2; Zinc-finger double domain.
- NP_653291.1 zinc finger protein 582 isoform 2: "Transcript Variant: This variant (2) uses an alternate splice junction in the 5' end compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1."
Gene ID: 147949 is ZNF583 zinc finger protein 583.
- NP_001153332.1 zinc finger protein 583: "Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein." Conserved Domains (3) summary: smart00349 Location: 6  66 KRAB; krueppel associated box, COG5048 Location: 209  542 COG5048; FOG: Zn-finger  and sd00017 Location: 214  234 ZF_C2H2; C2H2 Zn finger .
- NP_001153333.1 zinc finger protein 583: "Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein."
- NP_689691.2 zinc finger protein 583: "Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 3 encode the same protein."
Gene ID: 162968 see Complex locus A1BG and ZNF497.
Gene ID: 162972 is ZNF550 zinc finger protein 550.
- NP_001264019.1 zinc finger protein 550 isoform a: "Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Variants 1, 2 and 3 all encode isoform a." Conserved Domains (6) summary: smart00349 Location: 12  72 KRAB; krueppel associated box, COG5048 Location: 200  357 COG5048; FOG: Zn-finger , sd00017 Location: 205  225 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 203  225 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 12  51 KRAB; KRAB box and pfam13465 Location: 357  382 zf-H2C2_2; Zinc-finger double domain.
- NP_001264020.1 zinc finger protein 550 isoform a: "Transcript Variant: This variant (2) uses an alternate splice site in the 3' UTR, compared to variant 1. Variants 1, 2 and 3 all encode isoform a."
- NP_001264021.1 zinc finger protein 550 isoform a: "Transcript Variant: This variant (3) lacks an exon in the 3' UTR, compared to variant 1. Variants 1, 2 and 3 all encode isoform a."
- NP_001264022.1 zinc finger protein 550 isoform b: "Transcript Variant: This variant (4) contains alternate 3' exon structure and it thus differs in the 3' coding region, compared to variant 1. The encoded isoform (b) has a distinct and shorter C-terminus, compared to isoform a."
Gene ID: 201514 is ZNF584 zinc finger protein 584.
- NP_001304931.1 zinc finger protein 584 isoform 2: "Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region and contains an alternate exon the in the 3' coding region that results in a frameshift compared to variant 1. It encodes isoform 2, which is shorter than and has a distinct C-terminus compared to isoform 1." Conserved Domains (2) summary: smart00349 Location: 9  69 KRAB; krueppel associated box and pfam01352 Location: 9  48 KRAB; KRAB box.
- NP_001350609.1 zinc finger protein 584 isoform 3 .
- NP_775819.1 zinc finger protein 584 isoform 1: "Transcript Variant: This variant (1) encodes the longest isoform (1)"
Gene ID: 201516 is ZSCAN4 zinc finger and SCAN domain containing 4 aka ZNF494: "The ZSCAN4 gene encodes a protein involved in telomere maintenance and with a key role in the critical feature of mouse embryonic stem (ES) cells, namely, defying cellular senescence and maintaining normal karyotype for many cell divisions in culture (Zalzman et al., 2010 )."
- NP_689890.1 zinc finger and SCAN domain-containing protein 4, smart00431 Location: 40  148 SCAN; leucine rich region and cd07936 Location: 40  124 SCAN; SCAN oligomerization domain.
Gene ID: 256051 is ZNF549 zinc finger protein 549: "The ZSCAN4 gene encodes a protein involved in telomere maintenance and with a key role in the critical feature of mouse embryonic stem (ES) cells, namely, defying cellular senescence and maintaining normal karyotype for many cell divisions in culture (Zalzman et al., 2010 )."
- NP_001186224.2 zinc finger protein 549 isoform 1: "Transcript Variant: This variant (1) encodes the longer isoform (1)." Conserved Domains (4) summary: COG5048 Location: 223  603 COG5048; FOG: Zn-finger , sd00017 Location: 391  411 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 27  67 KRAB; KRAB box and pfam13465 Location: 600  624 zf-H2C2_2; Zinc-finger double domain.
- NP_694995.2  zinc finger protein 549 isoform 2: "Transcript Variant: This variant (2) contains an alternate exon] in the 5' coding region, compared to variant 1. Isoform 2 has a shorter N-terminus, compared to isoform 1."
Gene ID: 284306 is ZNF547 zinc finger protein 547.
- NP_775902.2  zinc finger protein 547, Conserved Domains (5) summary: smart00349 Location: 11  66 KRAB; krueppel associated box, COG5048 Location: 156  314 COG5048; FOG: Zn-finger , sd00017 Location: 186  206 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 11  50 KRAB; KRAB box and pfam13465 Location: 199  221 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 284307 is ZIK1 zinc finger protein interacting with K protein 1.
- NP_001010879.2 zinc finger protein interacting with ribonucleoprotein K, variant 1, Conserved Domains (5) summary: smart00349 Location: 27  68 KRAB; krueppel associated box, COG5048 Location: 269  449 COG5048; FOG: Zn-finger , sd00017 Location:381  401, ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 27  66 KRAB; KRAB box and pfam13465 Location: 394  418 zf-H2C2_2; Zinc-finger double domain.
- NP_001308074.1 zinc finger protein interacting with ribonucleoprotein K, variant 2.
- NP_001308075.1 zinc finger protein interacting with ribonucleoprotein K, variant 3.
- NP_001308076.1 zinc finger protein interacting with ribonucleoprotein K, variant 4.
Gene ID: 284309 is ZNF776 zinc finger protein 776.
- NP_001334936.1  zinc finger protein 776 isoform 2: "Transcript Variant: This variant (2) uses an alternate splice structure in its 3' coding region, resulting in a translational frameshift and shorter 3' UTR, compared to variant 1. The encoded isoform (2) is substantially shorter and has a distinct C-terminus compared to isoform 1."
- NP_775903.3  zinc finger protein 776 isoform 1: "Transcript Variant: This variant (1) encodes the longer isoform (1)." Conserved Domains (5) summary: smart00349 Location:14  55 KRAB; krueppel associated box, COG5048 Location: 291  439 COG5048; FOG: Zn-finger , sd00017 Location: 322  342 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 390  415 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 284312 is ZSCAN1 zinc finger and SCAN domain containing 1.
- NP_872378.3  zinc finger and SCAN domain-containing protein 1, Conserved Domains (3) summary: sd00017 Location: 294  314 ZF_C2H2; C2H2 Zn finger , pfam02023 Location: 35  122 SCAN; SCAN domain and pfam13465 Location: 306  331 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 342933 is ZSCAN5B zinc finger and SCAN domain containing 5B.
- NP_001073925.2  zinc finger and SCAN domain-containing protein 5B, Conserved Domains (5) summary: smart00431 Location: 40  139 SCAN; leucine rich region, cd07936 Location: 40  124 SCAN; SCAN oligomerization domain, sd00017 Location:385  405 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 355  377 zf-C2H2; Zinc finger, C2H2 type and pfam13465 Location: 453  478 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 342945 see Complex locus A1BG and ZNF497.
Gene ID: 348327 is ZNF530 zinc finger protein 530.
- NP_001308910.1 zinc finger protein 530 isoform 2, variant 2.
- NP_065931.3 zinc finger protein 530 isoform 1, variant 1, Conserved Domains (6) summary: smart00349 Location: 14  55 KRAB; krueppel associated box, COG5048 Location: 264  598 COG5048; FOG: Zn-finger , sd00017 Location: 521  541 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 267  289 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 533  558 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 374928 is ZNF773 zinc finger protein 773.
- NP_001291263.1  zinc finger protein 773 isoform b: "Transcript Variant: This variant (2) uses an alternate in-frame splice site in the central coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a." Conserved Domains (5) summary: smart00349 Location: 14  74 KRAB; krueppel associated box, COG5048 Location: 208  437 COG5048; FOG: Zn-finger , sd00017 Location: 192  212 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 14  53 KRAB; KRAB box and pfam13465 Location: 372  396 zf-H2C2_2; Zinc-finger double domain.
- NP_001291264.1 zinc finger protein 773 isoform c: "Transcript Variant: This variant (3) differs in the 3' structure, and uses an alternate in-frame splice site in the central coding region, resulting in a distinct 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (c) is shorter, and has a distinct C-terminus, compared to isoform a."
- NP_001291265.1 zinc finger protein 773 isoform d: "Transcript Variant: This variant (4) differs in the 3' UTR, and uses two alternate splice site in the coding region, one of which results in a frameshift compared to variant 1. The encoded isoform (d) is shorter, and has a distinct C-terminus, compared to isoform a."
- NP_001291266.1 zinc finger protein 773 isoform e: "Transcript Variant: This variant (5) differs in the 3' structure, and uses an alternate in-frame splice site in the central coding region, resulting in a distinct 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (e) is shorter, and has a distinct C-terminus, compared to isoform a."
- NP_940944.1 zinc finger protein 773 isoform a: "Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a)."
Gene ID: 386758 is ZNF582-AS1 ZNF582 antisense RNA 1 (head to head), ncRNA.
Gene ID: 388566 is ZNF470 zinc finger protein 470.
- NP_001001668.3 zinc finger protein 470, Conserved Domains (5) summary: smart00349 Location: 23  83 KRAB; krueppel associated box, COG5048 Location: 254  669 COG5048; FOG: Zn-finger , sd00017 Location: 258  278 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 23  62 KRAB; KRAB box and pfam13465 Location: 523  548 zf-H2C2_2; Zinc-finger double domain.
Gene ID: 388567 is ZNF749 zinc finger protein 749.
- NP_001018855.2 zinc finger protein 749 isoform 1, variant 1, Conserved Domains (5) summary: smart00349 Location: 8  62 KRAB; krueppel associated box, COG5048 Location: 295  689 COG5048; FOG: Zn-finger , sd00017 Location: 586  606 ZF_C2H2; C2H2 Zn finger , pfam01352 Location: 10  47 KRAB; KRAB box and pfam13465 Location: 599  623 zf-H2C2_2; Zinc-finger double domain.
- NP_001308881.1 zinc finger protein 749 isoform 2, variant 2.
- NP_001308882.1 zinc finger protein 749 isoform 3, variant 3.
- NP_001308883.1 zinc finger protein 749 isoform 3, variant 4.
Gene ID: 388569 is ZNF324B zinc finger protein 324B.
- NP_997278.2 zinc finger protein 324B, Conserved Domains (3) summary: smart00349 Location: 1  61 KRAB; krueppel associated box, COG5048 Location: 268  499 COG5048; FOG: Zn-finger  and sd00017 Location: 259  279 ZF_C2H2; C2H2 Zn finger .
Gene ID: 390980 is ZNF805 zinc finger protein 805.
- NP_001018857.2 zinc finger protein 805 isoform 1: "Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1)." Conserved Domains (6) summary: smart00349 Location: 13  73 KRAB; krueppel associated box, COG5048 Location: 192  568 COG5048; FOG: Zn-finger , sd00017 Location: 485  505 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 399  421 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 13  52 KRAB; KRAB box and pfam13465 Location: 413  438 zf-H2C2_2; Zinc-finger double domain.
- NP_001138550.1 zinc finger protein 805 isoform 2: "Transcript Variant: This variant (2) lacks an alternate exon in the 5' coding region, compared to variant 1. This difference causes translation initiation at a downstream AUG and results in an isoform (2) with a shorter N-terminus compared to isoform 1."
Gene ID: 400720 is ZNF772 zinc finger protein 772.
- NP_001019767.1 zinc finger protein 772 isoform 1: "Transcript Variant: This variant (1) represents the longest transcript and it encodes the longest protein (isoform 1)." Conserved Domains (6) summary: smart00349 Location: 27  87 KRAB; krueppel associated box, COG5048 Location: 158  464 COG5048; FOG: Zn-finger , sd00017 Location: 268  288 ZF_C2H2; C2H2 Zn finger , pfam00096 Location: 266  288 zf-C2H2; Zinc finger, C2H2 type, pfam01352 Location: 27  66 KRAB; KRAB box and pfam13465 Location: 280  305 zf-H2C2_2; Zinc-finger double domain.
- NP_001137540.1 zinc finger protein 772 isoform 2: "Transcript Variant: This variant (2) lacks an alternate segment in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter when it is compared to isoform 1."
- NP_001317542.1 zinc finger protein 772 isoform 3: "Transcript Variant: This variant differs in the 5' UTR which results in the use of a downstream start codon compared to variant 1. The encoded isoform (3) has a shorter N-terminus than isoform 1."
Gene ID: 503538 see Complex locus A1BG and ZNF497.
Gene ID: 503835 is DUXA double homeobox A: "Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This gene is a member of the DUXA homeobox gene family. Evidence of mRNA expression has not yet been found for this gene. Multiple, related processed pseudogenes have been found which are thought to reflect expression of this gene in the germ line or embryonic cells."
- NP_001012747.1 double homeobox protein A, cd00086 Location: 16  74 homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. pfam00046 Location: 105  155 Homeobox; Homeobox domain.
Gene ID: 646698 is ZSCAN5DP zinc finger and SCAN domain containing 5D pseudogene.
Gene ID: 646709 is LOC646709 NADH:ubiquinone oxidoreductase complex assembly factor 1 pseudogene.
Gene ID: 646820 is RPL19P19 ribosomal protein L19 pseudogene 19.
Gene ID: 646862 is RNF225 ring finger protein 225.
- NP_001182064.1 RING finger protein 225: cd00162 Location: 63  115 RING; RING-finger (Really Interesting New Gene)  RING finger is a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc. It is defined by the "cross-brace" motif that chelates zinc atoms by eight amino acid residues, typically Cys or His, arranged in a characteristic spacing. Canonical RING motifs have been categorized as two major subclasses, RING-HC (C3HC4-type) and RING-H2 (C3H2C3-type), according to their Cys/His content. There are also many variants of RING fingers. Some have different Cys/His pattern. Some lack a single Cys or His residues at typical Zn ligand positions. Especially, the fourth or eighth zinc ligand is prevalently exchanged for an Asp, which can indeed chelate Zn in a RING finger as well. C4C4-, C3HC3D-, C2H2C4-, and C3HC5-type RING fingers are closely related to RING-HC finger. In contrast, C4HC3- (RING-CH alias RINGv), C3H3C2-, C3H2C2D-, C3DHC3-, and C4HC2H-type RING fingers are close to RING-H2 finger. However, not all RING finger-containing proteins display regular RING finger features, and the RING finger family has turned out to be multifarious. The degenerated RING fingers from Siz/PIAS RING (SP-RING) family proteins and sporulation protein RMD5, are characterized by lacking the second, fifth, and sixth Zn2+ ion-coordinating residues. They bind only one Zn2+ ion. On the other hand, the RING fingers of the human APC11 and RBX1 proteins can bind a third Zn atom since they harbor four additional Zn ligands. U-box is a modified form of the RING finger domain that lacks metal chelating Cys and His. It resembles the cross-brace RING structure consisting of three beta-sheets and a single alpha-helix, which would be stabilized by salt bridges instead of chelated metal ions. U-box proteins are widely distributed among eukaryotic organisms and show a higher prevalence in plants than in other organisms. RING finger/U-box-containing proteins are a group of diverse proteins with a variety of cellular functions, including oncogenesis, development, viral replication, signal transduction, the cell cycle and apoptosis. Many of them are ubiquitin-protein ligases (E3s) that serves as a scaffold for binding to ubiquitin-conjugating enzymes (E2s, also referred to as ubiquitin carrier proteins or UBCs) in close proximity to substrate proteins, which enables efficient transfer of ubiquitin from E2 to the substrates.
Gene ID: 649137 is ZSCAN5C zinc finger and SCAN domain containing 5C.
- NP_001345342.1 zinc finger and SCAN domain-containing protein 5C, cd07936 Location: 40  124 SCAN; SCAN oligomerization domain.
Gene ID: 649186 is VN2R17P vomeronasal 2 receptor 17, pseudogene.
Gene ID: 729999 is LOC729999 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) pseudogene.
Gene ID: 730051 is ZNF814 zinc finger protein 814.
- NP_001138461.1 zinc finger protein 814, Conserved Domains (5) summary: smart00349 Location: 15  56 KRAB; krueppel associated box, COG5048 Location: 214  650 COG5048; FOG: Zn-finger , sd00017 Location: 746  766 ZF_C2H2; C2H2 Zn finger  pfam01352 Location: 15  54 KRAB; KRAB box and pfam13465 Location: 590  615zf-H2C2_2; Zinc-finger double domain.
Gene ID: 100033406 is VN2R18P vomeronasal 2 receptor 18 pseudogene.
Gene ID: 100033407 is VN2R19P vomeronasal 2 receptor 19, pseudogene.
Gene ID: 100073347 is MIMT1 MER1 repeat containing imprinted transcript 1.
- NR_024059.2 RNA Sequence: long non-coding RNA.
Gene ID: 100128252 is ZNF667-AS1 ZNF667 antisense RNA 1 (head to head).
- NR_036521.1 RNA Sequence: "Transcript Variant: This variant (1) represents the longer transcript."
- NR_036522.1 RNA Sequence: "Transcript Variant: This variant (2) uses an alternate splice donor site, compared to variant 1."
Gene ID: 100128398 is LOC100128398 uncharacterized LOC100128398.
- NR_036508.1 RNA Sequence: ncRNA.
Gene ID: 100129796 is RPL13P13 ribosomal protein L13 pseudogene 13.
Gene ID: 100130490 is TPRG1LP1 tumor protein p63 regulated 1 like pseudogene 1.
Gene ID: 100131691 is MZF1-AS1 MZF1 antisense RNA 1.
- NR_027334.2 RNA Sequence: ncRNA.
Gene ID: 100131934 is LETM1P2 leucine zipper and EF-hand containing transmembrane protein 1 pseudogene 2.
Gene ID: 100132009 is LOC100132009 pentatricopeptide repeat domain 3 pseudogene.
Gene ID: 100169890 is PEG3-AS1 PEG3 antisense RNA 1.
- NR_023847.2 RNA Sequence: ncRNA.
Gene ID: 100271545 is RPL7AP69 ribosomal protein L7a pseudogene 69.
Gene ID: 100271626 is RPL23AP79 ribosomal protein L23a pseudogene 79.
Gene ID: 100271650 is RPS15AP36 ribosomal protein S15a pseudogene 36.
Gene ID: 100288211 is LOC100288211 PPPDE peptidase domain containing 1 pseudogene.
Gene ID: 100293516 is ZNF587B zinc finger protein 587B.
Gene ID: 100312849 is VN1R107P vomeronasal 1 receptor 107 pseudogene.
Gene ID: 100419839 is LOC100419839 zinc finger protein 300 pseudogene.
Gene ID: 100419840 see Complex locus A1BG and ZNF497.
Gene ID: 100419847 is LOC100419847 zinc finger protein 436 pseudogene.
Gene ID: 100419848 is LOC100419848 zinc finger protein 250 pseudogene.
Gene ID: 100421657 is HNRNPDLP4 HNRNPDL pseudogene 4.
Gene ID: 100506374 is EDDM13 epididymal protein 13.
- NP_001341587.1 epididymal protein 13 precursor.
Gene ID: 100616168 is MIR4754 microRNA 4754: "microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop.".
Gene ID: 100874260 is UBE2CP5 ubiquitin conjugating enzyme E2 C pseudogene 5.
- NR_144562.1 RNA Sequence: ncRNA.
Gene ID: 100887072 is LOC100887072 zinc finger protein 470 pseudogene.
Gene ID: 101928886 is LINC01864 long intergenic non-protein coding RNA 1864.
Gene ID: 101928982 is LOC101928982 uncharacterized LOC101928982, ncRNA.
Gene ID: 101929059 is ZIM2-AS1 ZIM2 antisense RNA 1.
Gene ID: 102465484 is MIR6806 microRNA 6806: "microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop."
Gene ID: 102465976 is MIR6807 microRNA 6807: "microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop."
Gene ID: 105372468 is LOC105372468 uncharacterized LOC105372468, ncRNA.
Gene ID: 105372470 is LOC105372470 uncharacterized LOC105372470, ncRNA.
Gene ID: 105372471 is LOC105372471 uncharacterized LOC105372471, ncRNA.
Gene ID: 105372472 is LOC105372472 uncharacterized LOC105372472, ncRNA.
Gene ID: 105372473 is LOC105372473 uncharacterized LOC105372473, ncRNA.
Gene ID: 105372475 is LOC105372475 uncharacterized LOC105372475, ncRNA.
Gene ID: 105372476 is ZNF460-AS1 ZNF460 antisense RNA 1, ncRNA.
Gene ID: 105372478 is LOC105372478 taste receptor type 1 member 2-like.
- XP_011525888.1 taste receptor type 1 member 2-like, Conserved Domains (1) summary: cd06350 Location: 1  122 PBP1_GPCR_family_C_like; Ligand-binding domain of membrane-bound glutamate receptors that mediate excitatory transmission on the cellular surface through initial binding of glutamate and are categorized into ionotropic glutamate receptors (iGluRs) and metabotropic glutamate receptors (mGluRs) Ligand-binding domain of membrane-bound glutamate receptors that mediate excitatory transmission on the cellular surface through initial binding of glutamate and are categorized into ionotropic glutamate receptors (iGluRs) and metabotropic glutamate receptors (mGluRs). The metabotropic glutamate receptors (mGluR) are key receptors in the modulation of excitatory synaptic transmission in the central nervous system. The mGluRs are coupled to G proteins and are thus distinct from the iGluRs which internally contain ligand-gated ion channels. The mGluR structure is divided into three regions: the extracellular region, the seven-spanning transmembrane region and the cytoplasmic region. The extracellular region is further devided into the ligand-binding domain (LBD) and the cysteine-rich domain. The LBD has sequence similarity to the LIVBP, which is a bacterial periplasmic protein (PBP), as well as to the extracellular region of both iGluR and the gamma-aminobutyric acid (GABA)b receptor. iGluRs are divided into three main subtypes based on pharmacological profile: NMDA, AMPA, and kainate receptors. All family C GPCRs have a large extracellular N terminus that contain a domain with homology to bacterial periplasmic amino acid-binding proteins.
Gene ID: 105372479 is LOC105372479 uncharacterized LOC105372479, ncRNA.
Gene ID: 105372480 is LOC105372480 uncharacterized LOC105372480, ncRNA.
Gene ID: 105372481 is ERVK3-1 endogenous retrovirus group K3 member 1, ncRNA.
Gene ID: 105372482 is LOC105372482 uncharacterized LOC105372482, ncRNA.
Gene ID: 105372483 see Complex locus A1BG and ZNF497.
Gene ID: 105372484 is LOC105372484 uncharacterized LOC105372484, ncRNA.
Gene ID: 105372485 is LOC105372485 uncharacterized LOC105372485, ncRNA.
Gene ID: 105372486 is LOC105372486 uncharacterized LOC105372486, ncRNA.
Gene ID: 106479017 see Complex locus A1BG and ZNF497.
Gene ID: 106479415 is RN7SL526P RNA, 7SL, cytoplasmic 526, pseudogene.
Gene ID: 106479477 is RN7SL693P RNA, 7SL, cytoplasmic 693, pseudogene.
Gene ID: 106480240 is SLC25A36P1 SLC25A36 pseudogene 1.
Gene ID: 106480516 is RN7SL525P RNA, 7SL, cytoplasmic 525, pseudogene.
Gene ID: 106481602 is RNU6-1337P RNA, U6 small nuclear 1337, pseudogene.
Gene ID: 107987272 is LOC107987272 uncharacterized LOC107987272, ncRNA.
Gene ID: 108903150 is ZNF8-ERVK3-1 ZNF8-ERVK3-1 readthrough, ncRNA: "This locus represents naturally occurring readthrough transcription between the neighboring ZNF8 (zinc finger protein 8) and ERVK3-1 (endogenous retrovirus group K3, member 1) genes on chromosome 19. The readthrough transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is unlikely to produce a protein product."
Gene ID: 110806301 is LINC02560 long intergenic non-protein coding RNA 2560, ncRNA.
Gene ID: 112268241 is LOC112268241 uncharacterized LOC112268241.
Gene ID: 112268251 LOC112268251 is uncharacterized LOC112268251.
Gene ID: 112553117 is LOC112553117 Sharpr-MPRA regulatory region 1998: "This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in K562 erythroleukemia cells (group: K562 Activating DNase unmatched - State 1:Tss, active promoter, TSS/CpG island region), with weaker activation in HepG2 liver carcinoma cells (group: HepG2 Activating DNase matched - State 1:Tss)."
Gene ID: 112553119 is LOC112553119 Sharpr-MPRA regulatory region 10473: "This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in HepG2 liver carcinoma cells (group: HepG2 Activating DNase matched - State 5:Enh, candidate strong enhancer, open chromatin). It also displayed weak repressive activity by Sharpr-MPRA in K562 erythroleukemia cells (group: K562 Repressive non-DNase unmatched - State 24:Quies, heterochromatin/dead zone)."
Gene ID: 112577453 is LOC112577453 Sharpr-MPRA regulatory region 7872: "This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in both HepG2 liver carcinoma cells (group: HepG2 Activating DNase unmatched - State 1:Tss, active promoter, TSS/CpG island region) and K562 erythroleukemia cells (group: K562 Activating DNase unmatched - State 1:Tss)."
Gene ID: 112577454 is Sharpr-MPRA regulatory region 9894: "This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in K562 erythroleukemia cells (group: K562 Activating DNase unmatched - State 1:Tss, active promoter, TSS/CpG island region), with weaker activation in HepG2 liver carcinoma cells (group: HepG2 Activating DNase matched - State 1:Tss)."
Gene ID: 113218487 is MIR10394 microRNA 10394.
Gene ID: 114818278 is ZNF71-SMIM17 ZNF71-SMIM17 readthrough (NMD candidate).
Gene ID: 116286197 is LOC116286197 CRISPRi-validated cis-regulatory element chr19.6329: "This genomic region represents a DNase I hypersensitive site (DHS) that was predicted to be an enhancer by the ENCODE (ENCyclopedia Of DNA Elements) project based on various combinations of H3K27 acetylation and binding of p300, GATA1 and RNA polymerase II in K562 erythroleukemia cells. It was validated as a high-confidence cis-regulatory element for the ZNF582 (zinc finger protein 582) gene on chromosome 19 based on multiplex CRISPR/Cas9-mediated perturbation in K562 cells."

# Gene locations
- Gene ID: 147945 NLRP4 is at NC_000019.10 (55836540..55881855).
- Gene ID: 126204 NLRP13 is at NC_000019.10 (55891692..55932336, complement).
- Gene ID: 126205 NLRP8 is at NC_000019.10 (55947832..55988629).
- Gene ID: 126206 NLRP5 is at NC_000019.10 (55999726..56061810).
- Gene ID: 101928886 LINC01864 is at NC_000019.10 (56066684..56078801).
- Gene ID: 126208 ZNF787 is at NC_000019.10 (56087366..56121295, complement).
- Gene ID: 112553117 LOC112553117 is at NC_000019.10 (56120340..56120634).
- Gene ID: 55311 ZNF444 is at NC_000019.10 (56132509..56160893).
- Gene ID: 85569 GALP is at NC_000019.10 (56176008..56185775).
- Gene ID: 116286197 CRISPRi-validated cis-regulatory element chr19.6329 is at NC_000019.10 (56186901..56187499).
- Gene ID: 342933 ZSCAN5B is at NC_000019.10 (56189689..56197890, complement).
- Gene ID: 649137 ZSCAN5C is at NC_000019.10 (56205914..56209200).
- Gene ID: 100129796 RPL13P13 is at NC_000019.10 (56216974..56217830, complement).
- Gene ID: 79149 ZSCAN5A is at NC_000019.10 (56219670..56368383, complement).
- Gene ID: 646698 ZSCAN5DP is at NC_000019.10 (56243925..56247467).
- Gene ID: 100506374 EDDM13 is at NC_000019.10 (56272748..56310454).
- Gene ID: 105372470 LOC105372470 is at NC_000019.10 (56280599..56284539, complement).
- Gene ID: 105372468 LOC105372468 is at NC_000019.10 (56315425..56316029).
- Gene ID: 649186 VN2R17P is at NC_000019.10 (56317283..56317885, complement).
- Gene ID: 729999 LOC729999 is at NC_000019.10 (56318560..56322465, complement).
- Gene ID: 100033406 VN2R18P is at NC_000019.10 (56338218..56338905, complement).
- Gene ID: 646709 LOC646709 is at NC_000019.10 (56342339..56343724, complement).
- Gene ID: 147947 ZNF542P is at NC_000019.10 (56368099..56379828).
- Gene ID: 147948 ZNF582 is at NC_000019.10 (56382751..56393585, complement).
- Gene ID: 106480240 SLC25A36P1 is at NC_000019.10 (56386226..56386690).
- Gene ID: 386758 ZNF582-AS1 is at NC_000019.10 (56393676..56399175).
- Gene ID: 147949 ZNF583 is at NC_000019.10 (56404014..56427364).
- Gene ID: 63934 ZNF667 is at NC_000019.10 (56438512..56478065, complement).
- Gene ID: 100128252 ZNF667-AS1 is at NC_000019.10 (56477874..56495437).
- Gene ID: 105372471 LOC105372471 is at NC_000019.10 (56485911..56504196, complement).
- Gene ID: 57573 ZNF471 is at NC_000019.10 (56507855..56530212).
- Gene ID: 101928982 LOC101928982 is at NC_000019.10 (56536158..56538762, complement).
- Gene ID: 140612 ZFP28 is at NC_000019.10 (56536790..56559192).
- Gene ID: 112268241 LOC112268241 is at NC_000019.10 (56544192..56567439, complement).
- Gene ID: 388566 ZNF470 is at NC_000019.10 (56567468..56582894).
- Gene ID: 114189 SIGLEC31P is at NC_000019.10 (56589954..56590491, complement).
- Gene ID: 58491 ZNF71 is at NC_000019.10 (56595296..56624486).
- Gene ID: 114818278 ZNF71-SMIM17 is at NC_000019.10 (56595302..56657247).
- Gene ID: 147670 SMIM17 is at NC_000019.10 (56643159..56657247).
- Gene ID: 90485 ZNF835 is at NC_000019.10 (56661980..56671783, complement).
- Gene ID: 105372473 LOC105372473 is at NC_000019.10 (56672322..56710775).
- Gene ID: 105372472 LOC105372472 is at NC_000019.10 (56689282..56758298, complement).
- Gene ID: 79336 OR5AH1P is at NC_000019.10 (56760865..56761233).
- Gene ID: 101929059 ZIM2-AS1 is at NC_000019.10 (56765322..56799646).
- Gene ID: 23619 ZIM2 is at NC_000019.10 (56774547..56840729, complement).
- Gene ID: 5178 PEG3 is at NC_000019.10 (56810082..56840726, complement).
- Gene ID: 100169890 PEG3-AS1 is at NC_000019.10 (56812480..56813793).
- Gene ID: 100073347 MIMT1 is at NC_000019.10 (56840902..56848556).
- Gene ID: 112553119 LOC112553119 is at NC_000019.10 (56974881..56975175).
- Gene ID: 100271545 RPL7AP69 is at NC_000019.10 (57065346..57066139).
- Gene ID: 105372475 LOC105372475 is at NC_000019.10 (57074558..57078880).
- Gene ID: 100419839 LOC100419839 is at NC_000019.10 (57111120..57112027, complement).
- Gene ID: 57663 USP29 is at NC_000019.10 (57119654..57131983).
- Gene ID: 114026 ZIM3 is at NC_000019.10 (57134096..57145202, complement).
- Gene ID: 503835 DUXA is at NC_000019.10 (57154021..57167485, complement).
- Gene ID: 100132009 LOC100132009 is at NC_000019.10 (57175218..57178108).
- Gene ID: 9422 ZNF264 is at NC_000019.10 (57191500..57222846).
- Gene ID: 6795 AURKC is at NC_000019.10 (57230317..57235550).
- Gene ID: 390980 ZNF805 is at NC_000019.10 (57240632..57262728).
- Gene ID: 105372476 ZNF460-AS1 is at NC_000019.10 (57267193..57280334, complement).
- Gene ID: 10794 ZNF460 is at NC_000019.10 (57279967..57294069).
- Gene ID: 100288211 LOC100288211 is at NC_000019.10 (57317215..57317750, complement).
- Gene ID: 125919 ZNF543 is at NC_000019.10 (57320472..57330770).
- Gene ID: 57343 ZNF304 is at NC_000019.10 (57351253..57359898).
- Gene ID: 284306 ZNF547 is at NC_000019.10 (57363551..57379565).
- Gene ID: 10597 TRAPPC2B is at NC_000019.10 (57363551..57365405).
- Gene ID: 147694 ZNF548 is at NC_000019.10 (57389850..57403497).
- Gene ID: 7565 ZNF17 is at NC_000019.10 (57411161..57421939).
- Gene ID: 388567 ZNF749 is at NC_000019.10 (57428565..57447101).
- Gene ID: 57191 VN1R1 is at NC_000019.10 (57455174..57456739, complement).
- Gene ID: 100312849 VN1R107P is at NC_000019.10 (57459911..57460120).
- Gene ID: 400720 ZNF772 is at NC_000019.10 (57469586..57479014, complement).
- Gene ID: 79744 ZNF419 is at NC_000019.10 (57487720..57496098).
- Gene ID: 374928 ZNF773 is at NC_000019.10 (57499854..57518407).
- Gene ID: 256051 ZNF549 is at NC_000019.10 (57527325..57540876).
- Gene ID: 162972 ZNF550 is at NC_000019.10 (57541836..57561512, complement).
- Gene ID: 55659 ZNF416 is at NC_000019.10 (57571015..57578927, complement).
- Gene ID: 284307 ZIK1 is at NC_000019.10 (57583642..57593890).
- Gene ID: 348327 ZNF530 is at NC_000019.10 (57599877..57612722).
- Gene ID: 7693 ZNF134 is at NC_000019.10 (57614242..57624724).
- Gene ID: 10520 ZNF211 is at NC_000019.10 (57633167..57644046).
- Gene ID: 201516 ZSCAN4 is at NC_000019.10 (57651497..57679152).
- Gene ID: 100130490 TPRG1LP1 is at NC_000019.10 (57664292..57665036).
- Gene ID: 90233 ZNF551 is at NC_000019.10 (57681977..57690648).
- Gene ID: 7710 ZNF154 is at NC_000019.10 (57696275..57709204, complement).
- Gene ID: 79891 ZNF671 is at NC_000019.10 (57719747..57727637, complement).
- Gene ID: 284309 ZNF776 is at NC_000019.10 (57746815..57758148).
- Gene ID: 54807 ZNF586 is at NC_000019.10 (57769652..57780616).
- Gene ID: 79818 ZNF552 is at NC_000019.10 (57807082..57815989, complement).
- Gene ID: 2282 FKBP1AP1 is at NC_000019.10 (57825280..57827462, complement).
- Gene ID: 100293516 ZNF587B is at NC_000019.10 (57830299..57846238).
- Gene ID: 84914 ZNF587 is at NC_000019.10 (57849859..57865117).
- Gene ID: 100874260 UBE2CP5 is at NC_000019.10 (57867760..57869011).
- Gene ID: 730051 ZNF814 is at NC_000019.10 (57869381..57889037, complement).
- Gene ID: 147687 ZNF417 is at NC_000019.10 (57905411..57916592, complement).
- Gene ID: 147686 ZNF418 is at NC_000019.10 (57921882..57935403, complement).
- Gene ID: 10172 ZNF256 is at NC_000019.10 (57940833..57947706, complement).
- Gene ID: 646820 RPL19P19 is at NC_000019.10 (57953087..57953795, complement).
- Gene ID: 147685 C19orf18 is at NC_000019.10 (57958437..57974534, complement).
- Gene ID: 80095 ZNF606 is at NC_000019.10 (57977048..58003346, complement).
- Gene ID: 100128398 LOC100128398 is at NC_000019.10 (58002894..58007206).
- Gene ID: 100033407 VN2R19P is at NC_000019.10 (58012586..58013430, complement).
- Gene ID: 105372478 LOC105372478 is at NC_000019.10 (58019302..58025664, complement).
- Gene ID: 284312 ZSCAN1 is at NC_000019.10 (58033989..58058907).
- Gene ID: 100131934 LETM1P2 is at NC_000019.10 (58044440..58048251).
- Gene ID: 100421657 HNRNPDLP4 is at NC_000019.10 (58049046..58049547, complement).
- Gene ID: 7694 ZNF135 is at NC_000019.10 (58059227..58069755).
- Gene ID: 106479415 RN7SL526P is at NC_000019.10 (58069970..58070288).
- Gene ID: 65982 ZSCAN18 is at NC_000019.10 (58083834..58118433, complement).
- Gene ID: 79673 ZNF329 is at NC_000019.10 (58126248..58155169, complement).
- Gene ID: 10782 ZNF274 NC_000019.10 (58182989..58213562).
- Gene ID: 105372479 LOC105372479 is at NC_000019.10 (58216034..58218432, complement).
- Gene ID: 100271650 RPS15AP36 is at NC_000019.10 (58216147..58216611).
- Gene ID: 100419847 LOC100419847 is at NC_000019.10 (58224506..58225357).
- Gene ID: 27300 ZNF544 is at NC_000019.10 (58228594..58277497).
- Gene ID: 105372482 LOC105372482 is at NC_000019.10 (58257273..58278791, complement).
- Gene ID: 7554 ZNF8 is at NC_000019.10 (58278955..58302791).
- Gene ID: 108903150 ZNF8-ERVK3-1 is at NC_000019.10 (58278966..58315657).
- Gene ID: 105372480 LOC105372480 is at NC_000019.10 (58314950..58327248, complement).
- Gene ID: 105372481 ERVK3-1 is at NC_000019.10 (58305374..58315657).
- Gene ID: 100887072 LOC100887072 is at NC_000019.10 (58319277..58320489).
- Gene ID: 342945 ZSCAN22 is at NC_000019.10 (58326994..58342336).
- Gene ID: 102465484 MIR6806 is at NC_000019.10 (58334688..58334751). MIR6806 is transcribed in the negative direction from LOC105372480.
- Gene ID: 1 A1BG is at NC_000019.10 (58345183..58353492, complement).
- Gene ID: 503538 A1BG-AS1 is at NC_000019.10 (58351970..58355183).
- Gene ID: 162968 ZNF497 is at NC_000019.10 (58354357..58362751, complement).
- Gene ID: 100419840 LOC100419840 is at NC_000019.10 (58358049..58359239, complement).
- Gene ID: 105372483 LOC105372483 is at NC_000019.10 (58362626..58366578).
- Gene ID: 106479017 RNA5SP473 is at NC_000019.10 (58363498..58363572).
- Gene ID: 116412 ZNF837 is at NC_000019.10 (58367623..58381030, complement).
- Gene ID: 105372484 LOC105372484 is at NC_000019.10 (58377583..58379025).
- Gene ID: 100616168 MIR4754 is at NC_000019.10 (58386770..58386858, complement).
- Gene ID: 112577453 LOC112577453 is at NC_000019.10 (58387042..58387336).
- Gene ID: 6193 RPS5 is at NC_000019.10 (58387269..58394804).
- Gene ID: 113218487 MIR10394 is at NC_000019.10 (58393364..58393446).
- Gene ID: 646862 RNF225 is at NC_000019.10 (58396090..58397079).
- Gene ID: 110806301 LINC02560 is at NC_000019.10 (58400203..58400679).
- Gene ID: 201514 ZNF584 is at NC_000019.10 (58401472..58431396).
- Gene ID: 7691 ZNF132 is at NC_000019.10 (58432814..58440153, complement).
- Gene ID: 100419848 LOC100419848 is at NC_000019.10 (58444928..58445479).
- Gene ID: 388569 ZNF324B is at NC_000019.10 (58451611..58457833).
- Gene ID: 25799 ZNF324 is at NC_000019.10 (58467080..58475436).
- Gene ID: 112577454 LOC112577454 is at NC_000019.10 (58475962..58476256).
- Gene ID: 55663 ZNF446 is at NC_000019.10 (58476352..58489533).
- Gene ID: 112268251 LOC112268251 is at NC_000019.10 (58480718..58483568, complement).
- Gene ID: 106481602 RNU6-1337P is at NC_000019.10 (58483749..58483843, complement).
- Gene ID: 106479477 RN7SL693P is at NC_000019.10 (58490797..58491075).
- Gene ID: 10998 SLC27A5 is at NC_000019.10 (58498333..58512065, complement).
- Gene ID: 105372485 LOC105372485 is at NC_000019.10 (58499523..58511123).
- Gene ID: 84878 ZBTB45 is at NC_000019.10 (58513530..58542718, complement).
- Gene ID: 105372486 LOC105372486 is at NC_000019.10 (58514247..58516426).
- Gene ID: 106480516 RN7SL525P is at NC_000019.10 (58543299..58543578, complement).
- Gene ID: 10155 TRIM28 is at NC_000019.10 (58544064..58550722).
- Gene ID: 102465976 MIR6807 is at NC_000019.10 (58550285..58550376).
- Gene ID: 27243 CHMP2A is at NC_000019.10 (58551566..58555624, complement).
- Gene ID: 9040 UBE2M is at NC_000019.10 (58555712..58558611, complement).
- Gene ID: 100131691 MZF1-AS1 is at NC_000019.10 (58559186..58574797).
- Gene ID: 7593 MZF1 is at NC_000019.10 (58561917..58574478, complement).
- Gene ID: 65996 CENPBD1P1 is at NC_000019.10 (58575399..58584395).
- Gene ID: 107987272 LOC107987272 is at NC_000019.10 (58586267..58590946).
- Gene ID: 100271626 RPL23AP79 is at NC_000019.10 (58598956..58599484).

# Gene gaps
- Between NLRP4 and NLRP13: NC_000019.10 (55881856..55891691).
- Between NLRP13 and NLRP8: NC_000019.10 (55932337..55947831).
- Between NLRP8 and NLRP5: NC_000019.10 (55988630..55999725).
- Between NLRP5 and LINC01864: NC_000019.10 (56061811..56066683).
- Between LINC01864 and ZNF787: NC_000019.10 (56078802..56087365).
- Between LOC112553117 and ZNF444: NC_000019.10 (56120635..56132508).
- Between ZNF444 and GALP: NC_000019.10 (56160894..56176007).
- Between GALP and LOC116286197: NC_000019.10 (56185776..56186900).
- Between LOC116286197 and ZSCAN5B: NC_000019.10 (56187500..56189688).
- Between ZSCAN5B and ZSCAN5C: NC_000019.10 (56197891..56205913).
- Between ZSCAN5C and RPL13P13: NC_000019.10 (56209201..56216973).
- Between RPL13P13 and ZSCAN5A: NC_000019.10 (56217831..56219669).
- Between ZNF542P and ZNF582: NC_000019.10 (56379829..56382750).
- Between ZNF582 and ZNF582-AS1: NC_000019.10 (56393586..56393675).
- Between ZNF582-AS1 and ZNF583: NC_000019.10 (56399176..56404013).
- Between ZNF583 and ZNF667: NC_000019.10 (56427365..56438511).
- Between LOC105372471 and ZNF471: NC_000019.10 (56504197..56507854).
- Between ZNF471 and LOC101928982: NC_000019.10 (56530213..56536157).
- Between LOC112268241 and ZNF470: NC_000019.10 (56567440..56567467).
- Between ZNF470 and SIGLEC31P: NC_000019.10 (56582895..56589953).
- Between SIGLEC31P and ZNF71: NC_000019.10 (56590492..56595295).
- Between ZNF71-SMIM17 and ZNF835: NC_000019.10 (56657248..56661979).
- Between ZNF835 and LOC105372473: NC_000019.10 (56671784..56672321).
- Between LOC105372472 and OR5AH1P: NC_000019.10 (56758299..56760864).
- Between OR5AH1P and ZIM2-AS1: NC_000019.10 (56761234..56765321).
- Between ZIM2 and MIMT1: NC_000019.10 (56840730..56840901).
- Between MIMT1 and LOC112553119: NC_000019.10 (56848557..56974880).
- Between LOC112553119 and RPL7AP69: NC_000019.10 (56975176..57065345).
- Between RPL7AP69 and LOC105372475: NC_000019.10 (57066140..57074557).
- Between LOC105372475 and LOC100419839: NC_000019.10 (57078881..57111119).
- Between LOC100419839 and USP29: NC_000019.10 (57112028..57119653).
- Between USP29 and ZIM3: NC_000019.10 (57131984..57134095).
- Between ZIM3 and DUXA: NC_000019.10 (57145203..57154020).
- Between DUXA and LOC100132009: NC_000019.10 (57167486..57175217).
- Between LOC100132009 and ZNF264: NC_000019.10 (57178109..57191499).
- Between ZNF264 and AURKC: NC_000019.10 (57222847..57230316).
- Between AURKC and ZNF805: NC_000019.10 (57235551..57240631).
- Between ZNF805 and ZNF460-AS1: NC_000019.10 (57262729..57267192).
- Between ZNF460 and LOC100288211: NC_000019.10 (57294070..57317214).
- Between LOC100288211 and ZNF543: NC_000019.10 (57317751..57320471).
- Between ZNF543 and ZNF304: NC_000019.10 (57330771..57351252).
- Between ZNF304 and ZNF547: NC_000019.10 (57359899..57363550).
- Between ZNF547 and ZNF548: NC_000019.10 (57379566..57389849).
- Between ZNF548 and ZNF17: NC_000019.10 (57403498..57411160).
- Between ZNF17 and ZNF749: NC_000019.10 (57421940..57428564).
- Between ZNF749 and VN1R1: NC_000019.10 (57447102..57455173).
- Between VN1R1 and VN1R107P: NC_000019.10 (57456740..57459910).
- Between VN1R107P and ZNF772: NC_000019.10 (57460121..57469585).
- Between ZNF772 and ZNF419: NC_000019.10 (57479015..57487719).
- Between ZNF419 and ZNF773: NC_000019.10 (57496099..57499853).
- Between ZNF773 and ZNF549: NC_000019.10 (57518408..57527324).
- Between ZNF549 and ZNF550: NC_000019.10 (57540877..57541835).
- Between ZNF550 and ZNF416: NC_000019.10 (57561513..57571014).
- Between ZNF416 and ZIK1: NC_000019.10 (57578928..57583641).
- Between ZIK1 and ZNF530: NC_000019.10 (57593891..57599876).
- Between ZNF530 and ZNF134: NC_000019.10 (57612723..57614241).
- Between ZNF134 and ZNF211: NC_000019.10 (57624725..57633166).
- Between ZNF211 and ZSCAN4: NC_000019.10 (57644047..57651496).
- Between ZSCAN4 and ZNF551: NC_000019.10 (57679153..57681976).
- Between ZNF551 and ZNF154: NC_000019.10 (57690649..57696274).
- Between ZNF154 and ZNF671: NC_000019.10 (57709205..57719746).
- Between ZNF671 and ZNF776: NC_000019.10 (57727638..57746814).
- Between ZNF776 and ZNF586: NC_000019.10 (57758149..57769651).
- Between ZNF586 and ZNF552: NC_000019.10 (57780617..57807081).
- Between ZNF552 and FKBP1AP1: NC_000019.10 (57815990..57825279).
- Between FKBP1AP1 and ZNF587B: NC_000019.10 (57827463..57830298).
- Between ZNF587B and ZNF587: NC_000019.10 (57846239..57849858).
- Between ZNF587 and UBE2CP5: NC_000019.10 (57865118..57867759).
- Between UBE2CP5 and ZNF814: NC_000019.10 (57869012..57869380).
- Between ZNF814 and ZNF417: NC_000019.10 (57889038..57905410).
- Between ZNF417 and ZNF418: NC_000019.10 (57916593..57921881).
- Between ZNF418 and ZNF256: NC_000019.10 (57935404..57940832).
- Between ZNF256 and RPL19P19: NC_000019.10 (57947707..57953086).
- Between RPL19P19 and C19orf18: NC_000019.10 (57953796..57958436).
- Between C19orf18 and ZNF606: NC_000019.10 (57974535..57977047).
- Between LOC100128398 and VN2R19P: NC_000019.10 (58007207..58012585).
- Between VN2R19P and LOC105372478: NC_000019.10 (58013431..58019301).
- Between LOC105372478 and ZSCAN1: NC_000019.10 (58025665..58033988).
- Between ZSCAN1 and ZNF135: NC_000019.10 (58058908..58059226).
- Between ZNF135 and RN7SL526P: NC_000019.10 (58069756..58069969).
- Between RN7SL526P and ZSCAN18: NC_000019.10 (58070289..58083833).
- Between ZSCAN18 and ZNF329: NC_000019.10 (58118434..58126247).
- Between ZNF329 and ZNF274: NC_000019.10 (58155170..58182988).
- Between ZNF274 and LOC105372479: NC_000019.10 (58213563..58216033).
- Between LOC105372479 and LOC100419847: NC_000019.10 (58218433..58224505).
- Between LOC100419847 and ZNF544: NC_000019.10 (58225358..58228593).
- Between LOC105372482 and ZNF8: NC_000019.10 (58278792..58278954).
- Between ZSCAN22 and A1BG: NC_000019.10 (58342337..58345182).
- Between LOC105372483 and ZNF837: NC_000019.10 (58366579..58367622).
- Between ZNF837 and MIR754: NC_000019.10 (58381031..58386769).
- Between MIR754 and LOC112577453: NC_000019.10 (58386859..58387041).
- Between RPS5 and RNF225: NC_000019.10 (58394805..58396089).
- Between RNF225 and LINC02560: NC_000019.10 (58397080..58400202).
- Between LINC02560 and ZNF584: NC_000019.10 (58400680..58401471).
- Between ZNF584 and ZNF132: NC_000019.10 (58431397..58432813).
- Between ZNF132 and LOC100419848: NC_000019.10 (58440154..58444927).
- Between LOC100419848 and ZNF324B: NC_000019.10 (58445480..58451610).
- Between ZNF324B and ZNF324: NC_000019.10 (58457834..58475435).
- Between ZNF324 and LOC112577454: NC_000019.10 (58475437..58475961).
- Between LOC112577454 and ZNF446: NC_000019.10 (58476257..58476351).
- Between ZNF446 and RN7SL693P: NC_000019.10 (58489534..58490796).
- Between RN7SL693P and SLC27A5: NC_000019.10 (58491076..58498332).
- Between SLC27A5 and ZBTB45: NC_000019.10 (58512066..58513529).
- Between ZBTB45 and RN7SL525P: NC_000019.10 (58542719..58543298).
- Between RN7SL525P and TRIM28: NC_000019.10 (58543579..58544063).
- Between TRIM28 and CHMP2A: NC_000019.10 (58550723..58551565).
- Between CHMP2A and UBE2M: NC_000019.10 (58555625..58555711).
- Between UBE2M and MZF1-AS1: NC_000019.10 (58558612..58559185).
- Between MZF1-AS1 and CENPBD1P1: NC_000019.10 (58574798..58575398).
- Between CENPBD1P1 and LOC107987272: NC_000019.10 (58584396..58586266).
- Between LOC107987272 and RPL23AP79: NC_000019.10 (58590947..58598955).

# Hypotheses
- Downstream core promoters may work as transcription factors even as their complements or inverses.
- In addition to the DNA binding sequences listed above, the transcription factors that can open up and attach through the local epigenome need to be known and specified.
- Each DNA binding domain serving as a transcription factor for the promoter of any immunoglobulin supergene family member, also serves or is present in the promoters for A1BG.
- The function of A1BG is the same as other immunoglobulin genes possessing the immunoglobulin domain cl11960 and/or any of three immunoglobulin-like domains: pfam13895, cd05751 and smart00410 in the order and nucleotide sequence: cd05751 Location: 401  493, smart00410 Location: 218  280, pfam13895 Location: 210  301 and cl11960 Location: 28  110.